Multiple sequence alignment - TraesCS1D01G129500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G129500 chr1D 100.000 5812 0 0 1 5812 143250969 143256780 0.000000e+00 10733.0
1 TraesCS1D01G129500 chr1D 92.830 265 14 3 424 684 416771135 416770872 4.250000e-101 379.0
2 TraesCS1D01G129500 chr1D 96.552 87 3 0 174 260 143251058 143251144 1.690000e-30 145.0
3 TraesCS1D01G129500 chr1D 96.552 87 3 0 90 176 143251142 143251228 1.690000e-30 145.0
4 TraesCS1D01G129500 chr1A 95.414 2464 82 13 678 3132 146952825 146950384 0.000000e+00 3895.0
5 TraesCS1D01G129500 chr1A 94.180 1598 42 13 4223 5798 146948375 146946807 0.000000e+00 2388.0
6 TraesCS1D01G129500 chr1A 94.400 875 31 3 3124 3996 146949971 146949113 0.000000e+00 1328.0
7 TraesCS1D01G129500 chr1A 94.798 173 7 1 3991 4163 146948747 146948577 9.600000e-68 268.0
8 TraesCS1D01G129500 chr1A 93.827 162 10 0 260 421 146952985 146952824 1.620000e-60 244.0
9 TraesCS1D01G129500 chr1A 88.158 152 15 3 1 152 146953144 146952996 1.660000e-40 178.0
10 TraesCS1D01G129500 chr1A 97.778 45 1 0 4159 4203 146948418 146948374 1.740000e-10 78.7
11 TraesCS1D01G129500 chr1B 94.976 1891 64 13 3815 5697 192272229 192274096 0.000000e+00 2937.0
12 TraesCS1D01G129500 chr1B 93.921 1645 73 18 678 2303 192265360 192266996 0.000000e+00 2459.0
13 TraesCS1D01G129500 chr1B 90.528 834 40 16 2287 3098 192270294 192271110 0.000000e+00 1066.0
14 TraesCS1D01G129500 chr1B 94.647 467 22 2 3345 3808 192271491 192271957 0.000000e+00 721.0
15 TraesCS1D01G129500 chr1B 96.774 248 8 0 174 421 192265114 192265361 1.170000e-111 414.0
16 TraesCS1D01G129500 chr1B 94.400 250 14 0 424 673 601141801 601141552 9.140000e-103 385.0
17 TraesCS1D01G129500 chr1B 94.886 176 9 0 1 176 192265025 192265200 5.740000e-70 276.0
18 TraesCS1D01G129500 chr1B 98.485 132 2 0 3179 3310 192271108 192271239 3.500000e-57 233.0
19 TraesCS1D01G129500 chr4D 92.963 270 16 1 420 686 201964373 201964642 1.960000e-104 390.0
20 TraesCS1D01G129500 chr4D 94.094 254 15 0 420 673 259687832 259687579 2.540000e-103 387.0
21 TraesCS1D01G129500 chr4D 94.737 247 13 0 427 673 360934714 360934468 9.140000e-103 385.0
22 TraesCS1D01G129500 chr5D 94.400 250 14 0 424 673 489770410 489770161 9.140000e-103 385.0
23 TraesCS1D01G129500 chr5D 92.193 269 18 1 420 685 30904666 30904934 1.530000e-100 377.0
24 TraesCS1D01G129500 chr5D 95.745 94 4 0 3093 3186 240428129 240428036 1.010000e-32 152.0
25 TraesCS1D01G129500 chr2D 94.094 254 14 1 420 673 89703448 89703700 9.140000e-103 385.0
26 TraesCS1D01G129500 chr6D 91.513 271 20 1 424 691 21979128 21978858 2.560000e-98 370.0
27 TraesCS1D01G129500 chr6D 91.589 107 8 1 3083 3188 249956869 249956975 4.690000e-31 147.0
28 TraesCS1D01G129500 chr6B 86.047 172 21 2 3179 3348 657092939 657092769 1.290000e-41 182.0
29 TraesCS1D01G129500 chr6B 91.129 124 10 1 3179 3302 657196732 657196610 3.600000e-37 167.0
30 TraesCS1D01G129500 chr6B 91.129 124 10 1 3179 3302 657250794 657250672 3.600000e-37 167.0
31 TraesCS1D01G129500 chr6B 91.358 81 7 0 3020 3100 707799035 707798955 1.710000e-20 111.0
32 TraesCS1D01G129500 chr7A 95.604 91 4 0 3096 3186 136806190 136806100 4.690000e-31 147.0
33 TraesCS1D01G129500 chr3D 91.589 107 6 2 3095 3198 42630681 42630787 1.690000e-30 145.0
34 TraesCS1D01G129500 chr3D 95.604 91 3 1 3092 3182 562693530 562693619 1.690000e-30 145.0
35 TraesCS1D01G129500 chr2B 94.624 93 5 0 3090 3182 95449710 95449802 1.690000e-30 145.0
36 TraesCS1D01G129500 chr2B 95.000 40 1 1 3020 3058 619002241 619002202 1.750000e-05 62.1
37 TraesCS1D01G129500 chr3B 93.684 95 6 0 3093 3187 70294019 70293925 6.070000e-30 143.0
38 TraesCS1D01G129500 chr3A 94.565 92 5 0 3089 3180 375020178 375020087 6.070000e-30 143.0
39 TraesCS1D01G129500 chr2A 89.333 75 4 3 3025 3097 2226515 2226587 2.230000e-14 91.6
40 TraesCS1D01G129500 chr2A 82.090 67 9 3 3020 3085 763029262 763029198 3.000000e-03 54.7
41 TraesCS1D01G129500 chr7D 89.831 59 6 0 3031 3089 372901645 372901703 6.250000e-10 76.8
42 TraesCS1D01G129500 chr7B 89.831 59 6 0 3031 3089 368152382 368152440 6.250000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G129500 chr1D 143250969 143256780 5811 False 10733.0 10733 100.000000 1 5812 1 chr1D.!!$F1 5811
1 TraesCS1D01G129500 chr1A 146946807 146953144 6337 True 1197.1 3895 94.079286 1 5798 7 chr1A.!!$R1 5797
2 TraesCS1D01G129500 chr1B 192265025 192274096 9071 False 1158.0 2937 94.888143 1 5697 7 chr1B.!!$F1 5696

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
503 504 0.041238 TTGGGTGGGTGTTTGGTTCA 59.959 50.000 0.00 0.00 0.00 3.18 F
504 505 0.041238 TGGGTGGGTGTTTGGTTCAA 59.959 50.000 0.00 0.00 0.00 2.69 F
1237 1238 0.094730 CTCTTAAGGGTTTTCGCGCG 59.905 55.000 26.76 26.76 37.84 6.86 F
1292 1293 0.747852 TTTGGAGGTTTTGGGAACGC 59.252 50.000 0.00 0.00 0.00 4.84 F
1435 1440 1.283029 AGACACACCTGCAAGCCATAT 59.717 47.619 0.00 0.00 0.00 1.78 F
2774 6123 1.251251 GTTCTTGCCACCATTCTGCT 58.749 50.000 0.00 0.00 0.00 4.24 F
3340 7120 1.159098 AAAAAGTGAACCGCGCCGTA 61.159 50.000 0.00 0.00 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2321 5657 4.141135 TCAAGAGAGAGGGGAGATAACGAT 60.141 45.833 0.00 0.00 0.00 3.73 R
2455 5803 6.527423 ACGACTCACCAAAAACCTATTAAGA 58.473 36.000 0.00 0.00 0.00 2.10 R
2672 6020 1.196012 CTCTAAGTGGACCAGGACCC 58.804 60.000 5.40 0.62 0.00 4.46 R
2774 6123 1.597854 CTGTGAACCTTGCAGGCGA 60.598 57.895 2.50 0.00 39.63 5.54 R
3333 7113 1.265905 CCTTCCCAAAATATACGGCGC 59.734 52.381 6.90 0.00 0.00 6.53 R
3827 8091 1.620323 AGCCTTTTAAAGCAAGGGCAG 59.380 47.619 9.81 0.00 44.61 4.85 R
5095 9905 1.358759 CACACGTCCTTGGCCAAAC 59.641 57.895 20.91 14.83 0.00 2.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 3.553828 TGGAGACGGAAAGAGTTTGTT 57.446 42.857 0.00 0.00 0.00 2.83
120 121 1.839747 ACCGCCACTTACTCCACCA 60.840 57.895 0.00 0.00 0.00 4.17
160 161 2.185387 GAAGGTAGTGCTACAGGGGAA 58.815 52.381 10.98 0.00 37.78 3.97
161 162 1.867363 AGGTAGTGCTACAGGGGAAG 58.133 55.000 10.98 0.00 37.78 3.46
162 163 1.078989 AGGTAGTGCTACAGGGGAAGT 59.921 52.381 10.98 0.00 37.78 3.01
163 164 1.907255 GGTAGTGCTACAGGGGAAGTT 59.093 52.381 10.98 0.00 37.78 2.66
164 165 2.305052 GGTAGTGCTACAGGGGAAGTTT 59.695 50.000 10.98 0.00 37.78 2.66
165 166 3.244805 GGTAGTGCTACAGGGGAAGTTTT 60.245 47.826 10.98 0.00 37.78 2.43
166 167 3.595190 AGTGCTACAGGGGAAGTTTTT 57.405 42.857 0.00 0.00 0.00 1.94
182 183 0.467804 TTTTTCAAAGTGGCTGGGGC 59.532 50.000 0.00 0.00 37.82 5.80
183 184 0.689080 TTTTCAAAGTGGCTGGGGCA 60.689 50.000 0.00 0.00 40.87 5.36
184 185 0.689080 TTTCAAAGTGGCTGGGGCAA 60.689 50.000 0.00 0.00 40.46 4.52
185 186 1.398958 TTCAAAGTGGCTGGGGCAAC 61.399 55.000 0.00 0.00 42.47 4.17
186 187 2.132996 CAAAGTGGCTGGGGCAACA 61.133 57.895 0.00 0.00 44.47 3.33
187 188 2.133641 AAAGTGGCTGGGGCAACAC 61.134 57.895 0.00 0.00 44.47 3.32
188 189 4.603535 AGTGGCTGGGGCAACACC 62.604 66.667 0.00 0.00 44.47 4.16
198 199 4.058797 GCAACACCGCCACTTACT 57.941 55.556 0.00 0.00 0.00 2.24
199 200 1.866925 GCAACACCGCCACTTACTC 59.133 57.895 0.00 0.00 0.00 2.59
200 201 1.574702 GCAACACCGCCACTTACTCC 61.575 60.000 0.00 0.00 0.00 3.85
201 202 0.250124 CAACACCGCCACTTACTCCA 60.250 55.000 0.00 0.00 0.00 3.86
202 203 0.250166 AACACCGCCACTTACTCCAC 60.250 55.000 0.00 0.00 0.00 4.02
203 204 1.375523 CACCGCCACTTACTCCACC 60.376 63.158 0.00 0.00 0.00 4.61
204 205 1.839747 ACCGCCACTTACTCCACCA 60.840 57.895 0.00 0.00 0.00 4.17
205 206 1.373435 CCGCCACTTACTCCACCAA 59.627 57.895 0.00 0.00 0.00 3.67
206 207 0.673644 CCGCCACTTACTCCACCAAG 60.674 60.000 0.00 0.00 0.00 3.61
207 208 0.320374 CGCCACTTACTCCACCAAGA 59.680 55.000 0.00 0.00 0.00 3.02
208 209 1.066143 CGCCACTTACTCCACCAAGAT 60.066 52.381 0.00 0.00 0.00 2.40
209 210 2.167693 CGCCACTTACTCCACCAAGATA 59.832 50.000 0.00 0.00 0.00 1.98
210 211 3.738281 CGCCACTTACTCCACCAAGATAG 60.738 52.174 0.00 0.00 0.00 2.08
211 212 3.451178 GCCACTTACTCCACCAAGATAGA 59.549 47.826 0.00 0.00 0.00 1.98
212 213 4.101741 GCCACTTACTCCACCAAGATAGAT 59.898 45.833 0.00 0.00 0.00 1.98
213 214 5.740513 GCCACTTACTCCACCAAGATAGATC 60.741 48.000 0.00 0.00 0.00 2.75
214 215 5.363868 CCACTTACTCCACCAAGATAGATCA 59.636 44.000 0.00 0.00 0.00 2.92
215 216 6.462207 CCACTTACTCCACCAAGATAGATCAG 60.462 46.154 0.00 0.00 0.00 2.90
216 217 6.322456 CACTTACTCCACCAAGATAGATCAGA 59.678 42.308 0.00 0.00 0.00 3.27
217 218 6.549364 ACTTACTCCACCAAGATAGATCAGAG 59.451 42.308 0.00 0.00 0.00 3.35
218 219 5.136068 ACTCCACCAAGATAGATCAGAGA 57.864 43.478 0.00 0.00 0.00 3.10
219 220 5.523588 ACTCCACCAAGATAGATCAGAGAA 58.476 41.667 0.00 0.00 0.00 2.87
220 221 5.362430 ACTCCACCAAGATAGATCAGAGAAC 59.638 44.000 0.00 0.00 0.00 3.01
221 222 5.272402 TCCACCAAGATAGATCAGAGAACA 58.728 41.667 0.00 0.00 0.00 3.18
222 223 5.362143 TCCACCAAGATAGATCAGAGAACAG 59.638 44.000 0.00 0.00 0.00 3.16
223 224 5.453057 CCACCAAGATAGATCAGAGAACAGG 60.453 48.000 0.00 0.00 0.00 4.00
224 225 4.653341 ACCAAGATAGATCAGAGAACAGGG 59.347 45.833 0.00 0.00 0.00 4.45
225 226 4.898265 CCAAGATAGATCAGAGAACAGGGA 59.102 45.833 0.00 0.00 0.00 4.20
226 227 5.365025 CCAAGATAGATCAGAGAACAGGGAA 59.635 44.000 0.00 0.00 0.00 3.97
227 228 6.462768 CCAAGATAGATCAGAGAACAGGGAAG 60.463 46.154 0.00 0.00 0.00 3.46
228 229 5.147032 AGATAGATCAGAGAACAGGGAAGG 58.853 45.833 0.00 0.00 0.00 3.46
229 230 3.197927 AGATCAGAGAACAGGGAAGGT 57.802 47.619 0.00 0.00 0.00 3.50
230 231 4.338795 AGATCAGAGAACAGGGAAGGTA 57.661 45.455 0.00 0.00 0.00 3.08
231 232 4.285863 AGATCAGAGAACAGGGAAGGTAG 58.714 47.826 0.00 0.00 0.00 3.18
232 233 3.544698 TCAGAGAACAGGGAAGGTAGT 57.455 47.619 0.00 0.00 0.00 2.73
233 234 3.165875 TCAGAGAACAGGGAAGGTAGTG 58.834 50.000 0.00 0.00 0.00 2.74
234 235 1.903183 AGAGAACAGGGAAGGTAGTGC 59.097 52.381 0.00 0.00 0.00 4.40
235 236 1.903183 GAGAACAGGGAAGGTAGTGCT 59.097 52.381 0.00 0.00 0.00 4.40
236 237 3.097614 GAGAACAGGGAAGGTAGTGCTA 58.902 50.000 0.00 0.00 0.00 3.49
237 238 2.832733 AGAACAGGGAAGGTAGTGCTAC 59.167 50.000 0.95 0.95 35.40 3.58
238 239 2.320681 ACAGGGAAGGTAGTGCTACA 57.679 50.000 10.98 0.00 37.78 2.74
239 240 2.180276 ACAGGGAAGGTAGTGCTACAG 58.820 52.381 10.98 0.00 37.78 2.74
240 241 1.482593 CAGGGAAGGTAGTGCTACAGG 59.517 57.143 10.98 0.00 37.78 4.00
241 242 0.831307 GGGAAGGTAGTGCTACAGGG 59.169 60.000 10.98 0.00 37.78 4.45
242 243 0.831307 GGAAGGTAGTGCTACAGGGG 59.169 60.000 10.98 0.00 37.78 4.79
243 244 1.621622 GGAAGGTAGTGCTACAGGGGA 60.622 57.143 10.98 0.00 37.78 4.81
396 397 3.190874 GCAACTAGAACCCAGATCTTCG 58.809 50.000 0.00 0.00 0.00 3.79
419 420 2.792542 CGAGCAAGGCCATTTCGAATTC 60.793 50.000 5.01 0.00 33.38 2.17
420 421 2.424956 GAGCAAGGCCATTTCGAATTCT 59.575 45.455 5.01 0.00 0.00 2.40
421 422 2.165030 AGCAAGGCCATTTCGAATTCTG 59.835 45.455 5.01 0.00 0.00 3.02
422 423 2.533266 CAAGGCCATTTCGAATTCTGC 58.467 47.619 5.01 0.71 0.00 4.26
423 424 2.134789 AGGCCATTTCGAATTCTGCT 57.865 45.000 5.01 0.00 0.00 4.24
424 425 2.450476 AGGCCATTTCGAATTCTGCTT 58.550 42.857 5.01 0.00 0.00 3.91
425 426 2.165030 AGGCCATTTCGAATTCTGCTTG 59.835 45.455 5.01 0.00 0.00 4.01
426 427 2.533266 GCCATTTCGAATTCTGCTTGG 58.467 47.619 0.00 6.89 0.00 3.61
427 428 2.094545 GCCATTTCGAATTCTGCTTGGT 60.095 45.455 0.00 0.00 0.00 3.67
428 429 3.614870 GCCATTTCGAATTCTGCTTGGTT 60.615 43.478 0.00 0.00 0.00 3.67
429 430 4.559153 CCATTTCGAATTCTGCTTGGTTT 58.441 39.130 0.00 0.00 0.00 3.27
430 431 4.386652 CCATTTCGAATTCTGCTTGGTTTG 59.613 41.667 0.00 0.00 0.00 2.93
431 432 4.909696 TTTCGAATTCTGCTTGGTTTGA 57.090 36.364 0.00 0.00 0.00 2.69
432 433 4.488126 TTCGAATTCTGCTTGGTTTGAG 57.512 40.909 3.52 0.00 0.00 3.02
433 434 3.738982 TCGAATTCTGCTTGGTTTGAGA 58.261 40.909 3.52 0.00 0.00 3.27
434 435 3.498397 TCGAATTCTGCTTGGTTTGAGAC 59.502 43.478 3.52 0.00 0.00 3.36
447 448 4.911514 GTTTGAGACCAAGTTTGCCTAA 57.088 40.909 0.00 0.00 33.23 2.69
448 449 4.860072 GTTTGAGACCAAGTTTGCCTAAG 58.140 43.478 0.00 0.00 33.23 2.18
449 450 3.140325 TGAGACCAAGTTTGCCTAAGG 57.860 47.619 0.00 0.00 0.00 2.69
450 451 2.441750 TGAGACCAAGTTTGCCTAAGGT 59.558 45.455 0.00 0.00 35.15 3.50
451 452 3.117663 TGAGACCAAGTTTGCCTAAGGTT 60.118 43.478 0.00 0.00 33.24 3.50
452 453 3.222603 AGACCAAGTTTGCCTAAGGTTG 58.777 45.455 0.00 0.00 33.24 3.77
453 454 1.686587 ACCAAGTTTGCCTAAGGTTGC 59.313 47.619 0.00 0.00 29.85 4.17
454 455 1.000843 CCAAGTTTGCCTAAGGTTGCC 59.999 52.381 0.00 0.00 0.00 4.52
455 456 1.686052 CAAGTTTGCCTAAGGTTGCCA 59.314 47.619 0.00 0.00 0.00 4.92
456 457 1.328279 AGTTTGCCTAAGGTTGCCAC 58.672 50.000 0.00 0.00 0.00 5.01
457 458 1.036707 GTTTGCCTAAGGTTGCCACA 58.963 50.000 0.00 0.00 0.00 4.17
458 459 1.036707 TTTGCCTAAGGTTGCCACAC 58.963 50.000 0.00 0.00 0.00 3.82
459 460 0.825840 TTGCCTAAGGTTGCCACACC 60.826 55.000 0.00 0.00 37.04 4.16
465 466 2.551996 AGGTTGCCACACCTAAGGT 58.448 52.632 0.00 0.00 46.14 3.50
466 467 0.850784 AGGTTGCCACACCTAAGGTT 59.149 50.000 0.00 0.00 46.14 3.50
467 468 2.059490 AGGTTGCCACACCTAAGGTTA 58.941 47.619 0.00 0.00 46.14 2.85
468 469 2.039879 AGGTTGCCACACCTAAGGTTAG 59.960 50.000 0.00 0.00 46.14 2.34
480 481 3.756963 CCTAAGGTTAGGCAAGTTTGACC 59.243 47.826 2.80 0.00 43.43 4.02
481 482 1.892209 AGGTTAGGCAAGTTTGACCG 58.108 50.000 0.00 0.00 36.67 4.79
482 483 1.418637 AGGTTAGGCAAGTTTGACCGA 59.581 47.619 0.00 0.00 36.67 4.69
483 484 2.039879 AGGTTAGGCAAGTTTGACCGAT 59.960 45.455 0.00 0.00 36.67 4.18
484 485 2.817844 GGTTAGGCAAGTTTGACCGATT 59.182 45.455 0.00 0.00 36.67 3.34
485 486 3.254903 GGTTAGGCAAGTTTGACCGATTT 59.745 43.478 0.00 0.00 36.67 2.17
486 487 4.226761 GTTAGGCAAGTTTGACCGATTTG 58.773 43.478 0.00 0.00 36.67 2.32
487 488 1.613437 AGGCAAGTTTGACCGATTTGG 59.387 47.619 0.00 0.00 46.41 3.28
488 489 1.336795 GGCAAGTTTGACCGATTTGGG 60.337 52.381 0.00 0.00 44.64 4.12
489 490 1.339929 GCAAGTTTGACCGATTTGGGT 59.660 47.619 0.00 0.00 44.64 4.51
490 491 2.862140 GCAAGTTTGACCGATTTGGGTG 60.862 50.000 0.00 0.00 44.64 4.61
491 492 1.616159 AGTTTGACCGATTTGGGTGG 58.384 50.000 0.00 0.00 44.64 4.61
492 493 0.601057 GTTTGACCGATTTGGGTGGG 59.399 55.000 0.00 0.00 44.64 4.61
493 494 0.186386 TTTGACCGATTTGGGTGGGT 59.814 50.000 0.00 0.00 44.64 4.51
494 495 0.538516 TTGACCGATTTGGGTGGGTG 60.539 55.000 0.00 0.00 44.64 4.61
495 496 1.074248 GACCGATTTGGGTGGGTGT 59.926 57.895 0.00 0.00 44.64 4.16
496 497 0.538746 GACCGATTTGGGTGGGTGTT 60.539 55.000 0.00 0.00 44.64 3.32
497 498 0.105913 ACCGATTTGGGTGGGTGTTT 60.106 50.000 0.00 0.00 44.64 2.83
498 499 0.316841 CCGATTTGGGTGGGTGTTTG 59.683 55.000 0.00 0.00 0.00 2.93
499 500 0.316841 CGATTTGGGTGGGTGTTTGG 59.683 55.000 0.00 0.00 0.00 3.28
500 501 1.419381 GATTTGGGTGGGTGTTTGGT 58.581 50.000 0.00 0.00 0.00 3.67
501 502 1.765904 GATTTGGGTGGGTGTTTGGTT 59.234 47.619 0.00 0.00 0.00 3.67
502 503 1.196012 TTTGGGTGGGTGTTTGGTTC 58.804 50.000 0.00 0.00 0.00 3.62
503 504 0.041238 TTGGGTGGGTGTTTGGTTCA 59.959 50.000 0.00 0.00 0.00 3.18
504 505 0.041238 TGGGTGGGTGTTTGGTTCAA 59.959 50.000 0.00 0.00 0.00 2.69
505 506 0.750249 GGGTGGGTGTTTGGTTCAAG 59.250 55.000 0.00 0.00 0.00 3.02
506 507 0.104120 GGTGGGTGTTTGGTTCAAGC 59.896 55.000 0.00 0.00 0.00 4.01
507 508 0.104120 GTGGGTGTTTGGTTCAAGCC 59.896 55.000 0.00 0.00 0.00 4.35
508 509 0.324738 TGGGTGTTTGGTTCAAGCCA 60.325 50.000 0.00 0.00 37.84 4.75
509 510 0.104120 GGGTGTTTGGTTCAAGCCAC 59.896 55.000 0.00 0.00 38.42 5.01
510 511 0.820871 GGTGTTTGGTTCAAGCCACA 59.179 50.000 11.66 0.00 38.42 4.17
511 512 1.470805 GGTGTTTGGTTCAAGCCACAC 60.471 52.381 9.65 9.65 39.10 3.82
512 513 0.820871 TGTTTGGTTCAAGCCACACC 59.179 50.000 0.54 0.00 38.17 4.16
513 514 1.111277 GTTTGGTTCAAGCCACACCT 58.889 50.000 0.00 0.00 38.42 4.00
514 515 1.480545 GTTTGGTTCAAGCCACACCTT 59.519 47.619 0.00 0.00 38.42 3.50
515 516 2.691011 GTTTGGTTCAAGCCACACCTTA 59.309 45.455 0.00 0.00 38.42 2.69
516 517 2.270352 TGGTTCAAGCCACACCTTAG 57.730 50.000 0.00 0.00 32.81 2.18
517 518 1.202879 TGGTTCAAGCCACACCTTAGG 60.203 52.381 0.00 0.00 32.81 2.69
523 524 4.002797 CCACACCTTAGGCAAGCC 57.997 61.111 2.02 2.02 0.00 4.35
524 525 1.074775 CCACACCTTAGGCAAGCCA 59.925 57.895 14.40 0.00 38.92 4.75
525 526 1.244019 CCACACCTTAGGCAAGCCAC 61.244 60.000 14.40 0.00 38.92 5.01
526 527 0.537143 CACACCTTAGGCAAGCCACA 60.537 55.000 14.40 0.00 38.92 4.17
527 528 0.537371 ACACCTTAGGCAAGCCACAC 60.537 55.000 14.40 0.00 38.92 3.82
528 529 0.250901 CACCTTAGGCAAGCCACACT 60.251 55.000 14.40 0.00 38.92 3.55
529 530 1.003118 CACCTTAGGCAAGCCACACTA 59.997 52.381 14.40 0.00 38.92 2.74
530 531 1.279271 ACCTTAGGCAAGCCACACTAG 59.721 52.381 14.40 2.88 38.92 2.57
531 532 1.407437 CCTTAGGCAAGCCACACTAGG 60.407 57.143 14.40 8.00 38.92 3.02
532 533 0.618458 TTAGGCAAGCCACACTAGGG 59.382 55.000 14.40 0.00 38.92 3.53
533 534 0.546747 TAGGCAAGCCACACTAGGGT 60.547 55.000 14.40 0.00 42.17 4.34
534 535 1.377333 GGCAAGCCACACTAGGGTC 60.377 63.158 6.14 0.00 38.73 4.46
535 536 1.377333 GCAAGCCACACTAGGGTCC 60.377 63.158 0.00 0.00 38.73 4.46
536 537 1.299976 CAAGCCACACTAGGGTCCC 59.700 63.158 0.00 0.00 38.73 4.46
537 538 1.151899 AAGCCACACTAGGGTCCCA 60.152 57.895 11.55 0.00 38.73 4.37
538 539 1.489560 AAGCCACACTAGGGTCCCAC 61.490 60.000 11.55 0.00 38.73 4.61
539 540 2.221299 GCCACACTAGGGTCCCACA 61.221 63.158 11.55 0.00 0.00 4.17
540 541 1.562672 GCCACACTAGGGTCCCACAT 61.563 60.000 11.55 0.00 0.00 3.21
541 542 0.541863 CCACACTAGGGTCCCACATC 59.458 60.000 11.55 0.00 0.00 3.06
542 543 1.275666 CACACTAGGGTCCCACATCA 58.724 55.000 11.55 0.00 0.00 3.07
543 544 1.066143 CACACTAGGGTCCCACATCAC 60.066 57.143 11.55 0.00 0.00 3.06
544 545 1.275666 CACTAGGGTCCCACATCACA 58.724 55.000 11.55 0.00 0.00 3.58
545 546 1.839994 CACTAGGGTCCCACATCACAT 59.160 52.381 11.55 0.00 0.00 3.21
546 547 3.038280 CACTAGGGTCCCACATCACATA 58.962 50.000 11.55 0.00 0.00 2.29
547 548 3.039011 ACTAGGGTCCCACATCACATAC 58.961 50.000 11.55 0.00 0.00 2.39
548 549 1.965414 AGGGTCCCACATCACATACA 58.035 50.000 11.55 0.00 0.00 2.29
549 550 2.492025 AGGGTCCCACATCACATACAT 58.508 47.619 11.55 0.00 0.00 2.29
550 551 2.852449 AGGGTCCCACATCACATACATT 59.148 45.455 11.55 0.00 0.00 2.71
551 552 3.117888 AGGGTCCCACATCACATACATTC 60.118 47.826 11.55 0.00 0.00 2.67
552 553 3.371487 GGGTCCCACATCACATACATTCA 60.371 47.826 1.78 0.00 0.00 2.57
553 554 4.269183 GGTCCCACATCACATACATTCAA 58.731 43.478 0.00 0.00 0.00 2.69
554 555 4.704540 GGTCCCACATCACATACATTCAAA 59.295 41.667 0.00 0.00 0.00 2.69
555 556 5.184864 GGTCCCACATCACATACATTCAAAA 59.815 40.000 0.00 0.00 0.00 2.44
556 557 6.295011 GGTCCCACATCACATACATTCAAAAA 60.295 38.462 0.00 0.00 0.00 1.94
557 558 6.808212 GTCCCACATCACATACATTCAAAAAG 59.192 38.462 0.00 0.00 0.00 2.27
558 559 6.493115 TCCCACATCACATACATTCAAAAAGT 59.507 34.615 0.00 0.00 0.00 2.66
559 560 6.587226 CCCACATCACATACATTCAAAAAGTG 59.413 38.462 0.00 0.00 0.00 3.16
560 561 7.147312 CCACATCACATACATTCAAAAAGTGT 58.853 34.615 0.00 0.00 0.00 3.55
561 562 7.115236 CCACATCACATACATTCAAAAAGTGTG 59.885 37.037 0.00 0.00 37.43 3.82
562 563 7.115236 CACATCACATACATTCAAAAAGTGTGG 59.885 37.037 0.00 0.00 36.89 4.17
563 564 5.527951 TCACATACATTCAAAAAGTGTGGC 58.472 37.500 0.00 0.00 36.89 5.01
564 565 5.068329 TCACATACATTCAAAAAGTGTGGCA 59.932 36.000 0.00 0.00 36.89 4.92
565 566 5.752472 CACATACATTCAAAAAGTGTGGCAA 59.248 36.000 0.00 0.00 33.69 4.52
566 567 5.984926 ACATACATTCAAAAAGTGTGGCAAG 59.015 36.000 0.00 0.00 0.00 4.01
567 568 4.734398 ACATTCAAAAAGTGTGGCAAGA 57.266 36.364 0.00 0.00 0.00 3.02
568 569 5.280654 ACATTCAAAAAGTGTGGCAAGAT 57.719 34.783 0.00 0.00 0.00 2.40
569 570 5.673514 ACATTCAAAAAGTGTGGCAAGATT 58.326 33.333 0.00 0.00 0.00 2.40
570 571 5.754890 ACATTCAAAAAGTGTGGCAAGATTC 59.245 36.000 0.00 0.00 0.00 2.52
571 572 4.320608 TCAAAAAGTGTGGCAAGATTCC 57.679 40.909 0.00 0.00 0.00 3.01
572 573 3.960102 TCAAAAAGTGTGGCAAGATTCCT 59.040 39.130 0.00 0.00 0.00 3.36
573 574 4.405358 TCAAAAAGTGTGGCAAGATTCCTT 59.595 37.500 0.00 0.00 0.00 3.36
574 575 5.104982 TCAAAAAGTGTGGCAAGATTCCTTT 60.105 36.000 0.00 0.00 0.00 3.11
575 576 6.097554 TCAAAAAGTGTGGCAAGATTCCTTTA 59.902 34.615 0.00 0.00 0.00 1.85
576 577 5.712152 AAAGTGTGGCAAGATTCCTTTAG 57.288 39.130 0.00 0.00 0.00 1.85
577 578 3.690460 AGTGTGGCAAGATTCCTTTAGG 58.310 45.455 0.00 0.00 0.00 2.69
578 579 2.164422 GTGTGGCAAGATTCCTTTAGGC 59.836 50.000 0.00 0.00 34.44 3.93
579 580 2.041620 TGTGGCAAGATTCCTTTAGGCT 59.958 45.455 0.00 0.00 34.44 4.58
580 581 3.092301 GTGGCAAGATTCCTTTAGGCTT 58.908 45.455 0.00 0.00 34.44 4.35
581 582 3.091545 TGGCAAGATTCCTTTAGGCTTG 58.908 45.455 0.00 9.14 36.51 4.01
582 583 3.156511 GCAAGATTCCTTTAGGCTTGC 57.843 47.619 17.81 17.81 44.95 4.01
583 584 2.159184 GCAAGATTCCTTTAGGCTTGCC 60.159 50.000 20.17 2.97 45.16 4.52
584 585 3.091545 CAAGATTCCTTTAGGCTTGCCA 58.908 45.455 14.54 0.00 30.17 4.92
585 586 3.456380 AGATTCCTTTAGGCTTGCCAA 57.544 42.857 14.54 3.69 34.44 4.52
586 587 3.092301 AGATTCCTTTAGGCTTGCCAAC 58.908 45.455 14.54 0.00 34.44 3.77
587 588 2.675658 TTCCTTTAGGCTTGCCAACT 57.324 45.000 14.54 0.00 34.44 3.16
588 589 2.675658 TCCTTTAGGCTTGCCAACTT 57.324 45.000 14.54 0.00 34.44 2.66
589 590 2.238521 TCCTTTAGGCTTGCCAACTTG 58.761 47.619 14.54 0.00 34.44 3.16
590 591 1.963515 CCTTTAGGCTTGCCAACTTGT 59.036 47.619 14.54 0.00 0.00 3.16
591 592 2.365293 CCTTTAGGCTTGCCAACTTGTT 59.635 45.455 14.54 0.00 0.00 2.83
592 593 3.383761 CTTTAGGCTTGCCAACTTGTTG 58.616 45.455 14.54 6.52 0.00 3.33
593 594 0.673437 TAGGCTTGCCAACTTGTTGC 59.327 50.000 14.54 4.88 0.00 4.17
594 595 1.044790 AGGCTTGCCAACTTGTTGCT 61.045 50.000 14.54 0.00 0.00 3.91
595 596 0.598419 GGCTTGCCAACTTGTTGCTC 60.598 55.000 6.79 3.26 0.00 4.26
596 597 0.386838 GCTTGCCAACTTGTTGCTCT 59.613 50.000 7.89 0.00 0.00 4.09
597 598 1.202452 GCTTGCCAACTTGTTGCTCTT 60.202 47.619 7.89 0.00 0.00 2.85
598 599 2.034558 GCTTGCCAACTTGTTGCTCTTA 59.965 45.455 7.89 0.00 0.00 2.10
599 600 3.305608 GCTTGCCAACTTGTTGCTCTTAT 60.306 43.478 7.89 0.00 0.00 1.73
600 601 4.797275 GCTTGCCAACTTGTTGCTCTTATT 60.797 41.667 7.89 0.00 0.00 1.40
601 602 4.935352 TGCCAACTTGTTGCTCTTATTT 57.065 36.364 7.89 0.00 0.00 1.40
602 603 5.275067 TGCCAACTTGTTGCTCTTATTTT 57.725 34.783 7.89 0.00 0.00 1.82
603 604 6.398234 TGCCAACTTGTTGCTCTTATTTTA 57.602 33.333 7.89 0.00 0.00 1.52
604 605 6.810911 TGCCAACTTGTTGCTCTTATTTTAA 58.189 32.000 7.89 0.00 0.00 1.52
605 606 7.268586 TGCCAACTTGTTGCTCTTATTTTAAA 58.731 30.769 7.89 0.00 0.00 1.52
606 607 7.766278 TGCCAACTTGTTGCTCTTATTTTAAAA 59.234 29.630 2.51 2.51 0.00 1.52
607 608 8.608317 GCCAACTTGTTGCTCTTATTTTAAAAA 58.392 29.630 4.44 0.00 0.00 1.94
628 629 6.937436 AAAACTAACCTTAGACAAGTGTGG 57.063 37.500 0.00 0.00 34.84 4.17
629 630 4.004196 ACTAACCTTAGACAAGTGTGGC 57.996 45.455 0.00 0.00 34.84 5.01
630 631 3.389983 ACTAACCTTAGACAAGTGTGGCA 59.610 43.478 0.00 0.00 33.83 4.92
631 632 3.290948 AACCTTAGACAAGTGTGGCAA 57.709 42.857 0.00 0.00 33.83 4.52
632 633 2.572290 ACCTTAGACAAGTGTGGCAAC 58.428 47.619 0.00 0.00 33.83 4.17
633 634 6.201382 CTAACCTTAGACAAGTGTGGCAACA 61.201 44.000 0.00 0.00 37.28 3.33
634 635 7.462844 CTAACCTTAGACAAGTGTGGCAACAT 61.463 42.308 0.00 0.00 40.37 2.71
635 636 8.862894 CTAACCTTAGACAAGTGTGGCAACATT 61.863 40.741 0.00 0.00 40.37 2.71
647 648 3.317603 GGCAACATTGTATGGCAAAGT 57.682 42.857 15.50 0.00 40.27 2.66
648 649 2.995258 GGCAACATTGTATGGCAAAGTG 59.005 45.455 15.50 0.00 38.77 3.16
649 650 3.554752 GGCAACATTGTATGGCAAAGTGT 60.555 43.478 15.50 0.00 38.77 3.55
650 651 3.429543 GCAACATTGTATGGCAAAGTGTG 59.570 43.478 0.00 0.00 38.77 3.82
651 652 3.940209 ACATTGTATGGCAAAGTGTGG 57.060 42.857 0.00 0.00 40.91 4.17
660 661 2.352503 GCAAAGTGTGGCATGGTTAG 57.647 50.000 0.00 0.00 0.00 2.34
661 662 1.067635 GCAAAGTGTGGCATGGTTAGG 60.068 52.381 0.00 0.00 0.00 2.69
662 663 1.067635 CAAAGTGTGGCATGGTTAGGC 60.068 52.381 0.00 0.00 0.00 3.93
671 672 3.492102 GCATGGTTAGGCCTAGAATCA 57.508 47.619 13.36 8.22 38.35 2.57
672 673 3.820557 GCATGGTTAGGCCTAGAATCAA 58.179 45.455 13.36 0.00 38.35 2.57
673 674 3.817647 GCATGGTTAGGCCTAGAATCAAG 59.182 47.826 13.36 5.99 38.35 3.02
674 675 3.560636 TGGTTAGGCCTAGAATCAAGC 57.439 47.619 13.36 9.20 38.35 4.01
675 676 2.172717 TGGTTAGGCCTAGAATCAAGCC 59.827 50.000 13.36 3.85 46.13 4.35
878 879 3.064987 CTAGTGCCGCGTACAGCCT 62.065 63.158 4.92 3.55 44.76 4.58
962 963 2.202623 GGTCTAGGTGTGCTCGCG 60.203 66.667 0.00 0.00 0.00 5.87
1220 1221 0.100503 GAGAGAGGACTTCTGCGCTC 59.899 60.000 9.73 0.00 35.87 5.03
1232 1233 2.423577 TCTGCGCTCTTAAGGGTTTTC 58.576 47.619 9.73 0.00 37.74 2.29
1237 1238 0.094730 CTCTTAAGGGTTTTCGCGCG 59.905 55.000 26.76 26.76 37.84 6.86
1247 1248 2.450960 TTTTCGCGCGGTTGTGATGG 62.451 55.000 31.69 0.00 0.00 3.51
1254 1255 1.378762 CGGTTGTGATGGGGGAAGT 59.621 57.895 0.00 0.00 0.00 3.01
1257 1258 1.545841 GTTGTGATGGGGGAAGTTCC 58.454 55.000 13.99 13.99 35.23 3.62
1258 1259 1.153539 TTGTGATGGGGGAAGTTCCA 58.846 50.000 23.33 4.14 38.64 3.53
1267 1268 2.844348 GGGGGAAGTTCCAAGTCTCATA 59.156 50.000 23.33 0.00 38.64 2.15
1280 1281 5.455326 CCAAGTCTCATATAGGGTTTGGAGG 60.455 48.000 0.00 0.00 34.75 4.30
1292 1293 0.747852 TTTGGAGGTTTTGGGAACGC 59.252 50.000 0.00 0.00 0.00 4.84
1347 1348 5.104277 TGGGGTTTCGTTCTGGATTACATAT 60.104 40.000 0.00 0.00 0.00 1.78
1418 1423 7.222611 AGTTGTCATTATGCAAACAAAACAGAC 59.777 33.333 10.74 0.00 33.75 3.51
1435 1440 1.283029 AGACACACCTGCAAGCCATAT 59.717 47.619 0.00 0.00 0.00 1.78
1442 1447 6.016024 ACACACCTGCAAGCCATATATTAATG 60.016 38.462 0.00 0.00 0.00 1.90
1449 1454 7.001073 TGCAAGCCATATATTAATGTGTGGTA 58.999 34.615 22.91 7.81 0.00 3.25
1595 1607 6.341316 TCAGACTATGTTACTTCATCCTTGC 58.659 40.000 0.00 0.00 0.00 4.01
1675 1691 6.098695 ACACGGATAGGGTTACTGCTTAATTA 59.901 38.462 0.00 0.00 26.81 1.40
1704 1720 4.694509 ACTGATTGCTGAGAGTGTTTGATC 59.305 41.667 0.00 0.00 0.00 2.92
1738 1754 1.662629 CATTGTTCTCTGTGCTAGGCG 59.337 52.381 0.00 0.00 0.00 5.52
1992 2011 5.988310 TGATCTTTTCATGCCTTGATTGT 57.012 34.783 0.00 0.00 33.34 2.71
2017 2036 9.675553 GTCTTTTCTTTCAAATTTTGTTTCTCG 57.324 29.630 8.89 0.00 0.00 4.04
2070 2089 6.203723 GTGTGGATAGATGTCATTTAGAAGGC 59.796 42.308 0.00 0.00 0.00 4.35
2147 2166 4.211125 TGCCAATGACCTTGTACAGAAAA 58.789 39.130 0.00 0.00 32.61 2.29
2148 2167 4.832266 TGCCAATGACCTTGTACAGAAAAT 59.168 37.500 0.00 0.00 32.61 1.82
2335 5675 4.547671 TCTCTTTCATCGTTATCTCCCCT 58.452 43.478 0.00 0.00 0.00 4.79
2363 5703 8.390354 TCTCTTGAAAATTTATGCATAGACACG 58.610 33.333 6.50 0.00 0.00 4.49
2590 5938 7.680730 AGGGTATGGACATATAGTGTTGAATC 58.319 38.462 0.00 0.00 42.36 2.52
2659 6007 4.137116 GGTCATGCCTGATAGTGTGTTA 57.863 45.455 0.00 0.00 32.98 2.41
2672 6020 8.322906 TGATAGTGTGTTACTGAAAATTCCAG 57.677 34.615 6.33 6.33 40.65 3.86
2706 6054 4.469945 CACTTAGAGATTCCACCAAGGGTA 59.530 45.833 0.00 0.00 38.24 3.69
2774 6123 1.251251 GTTCTTGCCACCATTCTGCT 58.749 50.000 0.00 0.00 0.00 4.24
2884 6233 9.844790 CTATAAAAAGTCACAATCAAGCAATGA 57.155 29.630 0.00 0.00 43.67 2.57
2895 6244 4.730487 GCAATGAGCAGGTCACCT 57.270 55.556 3.92 0.00 44.79 4.00
2920 6270 6.641169 TTCTGCATTCTAGTCACGATAGAT 57.359 37.500 0.00 0.00 41.38 1.98
3098 6456 7.625606 GCACAACTTTGACCACTAATACATACC 60.626 40.741 0.00 0.00 0.00 2.73
3101 6459 5.104235 ACTTTGACCACTAATACATACCCCC 60.104 44.000 0.00 0.00 0.00 5.40
3102 6460 4.289837 TGACCACTAATACATACCCCCT 57.710 45.455 0.00 0.00 0.00 4.79
3122 6480 5.024118 CCCTCCGTCCCATAATATAAGAGT 58.976 45.833 0.00 0.00 0.00 3.24
3333 7113 3.303132 CGAAGACCAGAAAAAGTGAACCG 60.303 47.826 0.00 0.00 0.00 4.44
3338 7118 1.724581 GAAAAAGTGAACCGCGCCG 60.725 57.895 0.00 0.00 0.00 6.46
3340 7120 1.159098 AAAAAGTGAACCGCGCCGTA 61.159 50.000 0.00 0.00 0.00 4.02
3357 7353 3.181448 GCCGTATATTTTGGGAAGGAGGA 60.181 47.826 0.00 0.00 0.00 3.71
3359 7355 5.442391 CCGTATATTTTGGGAAGGAGGAAA 58.558 41.667 0.00 0.00 0.00 3.13
3455 7453 1.405821 GGACTCCCTATATCGATGCCG 59.594 57.143 8.54 0.00 37.07 5.69
3525 7523 8.029782 TCTTACATAGAAGCTTATGGCCTTTA 57.970 34.615 12.68 0.00 43.05 1.85
3549 7547 1.211949 GGCTGTAACAAGGCCTGGATA 59.788 52.381 16.25 2.80 42.31 2.59
3589 7587 7.987750 TTTGTGTGCATAAGTTATTACCTGA 57.012 32.000 0.00 0.00 0.00 3.86
3604 7602 1.208052 ACCTGATGAACTGTCCATCCG 59.792 52.381 4.50 0.00 39.60 4.18
3673 7671 5.003804 TCAATTTGGTTCCTTCTGTAGCTC 58.996 41.667 0.00 0.00 0.00 4.09
3827 8091 2.877335 GGTCAATACCACGACTGAGAC 58.123 52.381 0.00 0.00 45.98 3.36
3945 8210 2.224305 ACGAGCTCTTACTGCCAACTTT 60.224 45.455 12.85 0.00 0.00 2.66
4021 8657 5.356882 TTGAAGAACTAATGGACGCTTTG 57.643 39.130 0.00 0.00 0.00 2.77
4022 8658 3.188460 TGAAGAACTAATGGACGCTTTGC 59.812 43.478 0.00 0.00 0.00 3.68
4089 8725 9.516314 GCAATCACTTTTTATAAACTCCATACC 57.484 33.333 0.00 0.00 0.00 2.73
4117 8753 5.128663 TCGATTGATTGGTCTCATAGGTTCA 59.871 40.000 0.00 0.00 0.00 3.18
4118 8754 5.994054 CGATTGATTGGTCTCATAGGTTCAT 59.006 40.000 0.00 0.00 0.00 2.57
4204 9003 6.498303 TGATAGCATCTCCCTAACATGTATGT 59.502 38.462 0.00 0.00 44.20 2.29
4219 9018 5.351465 ACATGTATGTTTCGGTGACTTCATC 59.649 40.000 0.00 0.00 37.90 2.92
4304 9103 6.752351 CGGATAATCCTAATATCGTGTTCCTG 59.248 42.308 0.00 0.00 33.30 3.86
5093 9903 1.379309 ACACACCGTTGGTTTGGCT 60.379 52.632 7.03 0.00 37.66 4.75
5094 9904 1.065600 CACACCGTTGGTTTGGCTG 59.934 57.895 0.00 0.00 31.02 4.85
5095 9905 2.124693 ACACCGTTGGTTTGGCTGG 61.125 57.895 0.00 0.00 31.02 4.85
5096 9906 2.124693 CACCGTTGGTTTGGCTGGT 61.125 57.895 0.00 0.00 31.02 4.00
5097 9907 1.380650 ACCGTTGGTTTGGCTGGTT 60.381 52.632 0.00 0.00 27.29 3.67
5098 9908 0.973496 ACCGTTGGTTTGGCTGGTTT 60.973 50.000 0.00 0.00 27.29 3.27
5099 9909 0.529555 CCGTTGGTTTGGCTGGTTTG 60.530 55.000 0.00 0.00 0.00 2.93
5100 9910 0.529555 CGTTGGTTTGGCTGGTTTGG 60.530 55.000 0.00 0.00 0.00 3.28
5101 9911 0.813610 GTTGGTTTGGCTGGTTTGGC 60.814 55.000 0.00 0.00 0.00 4.52
5143 9953 3.808174 CAGGCCTAGGTAACGAATAAAGC 59.192 47.826 3.98 0.00 46.39 3.51
5144 9954 2.798847 GGCCTAGGTAACGAATAAAGCG 59.201 50.000 11.31 0.00 46.39 4.68
5145 9955 3.491447 GGCCTAGGTAACGAATAAAGCGA 60.491 47.826 11.31 0.00 46.39 4.93
5147 9957 4.047142 CCTAGGTAACGAATAAAGCGACC 58.953 47.826 0.00 0.00 46.39 4.79
5149 9959 2.094545 AGGTAACGAATAAAGCGACCGT 60.095 45.455 0.00 0.00 46.39 4.83
5150 9960 2.667969 GGTAACGAATAAAGCGACCGTT 59.332 45.455 0.00 0.00 44.22 4.44
5151 9961 3.123453 GGTAACGAATAAAGCGACCGTTT 59.877 43.478 0.00 0.00 42.40 3.60
5152 9962 4.326009 GGTAACGAATAAAGCGACCGTTTA 59.674 41.667 0.00 0.00 42.40 2.01
5286 10096 8.693542 ACATTTTGCTAATATTGTGCTCTTTC 57.306 30.769 13.74 0.00 0.00 2.62
5331 10144 6.908825 TGTGTTGTACAATTTGAAGGCTATC 58.091 36.000 12.26 0.00 36.06 2.08
5428 10242 4.456222 CCCGTGTGGTTATTGTTCATAACA 59.544 41.667 6.97 0.00 46.59 2.41
5454 10268 3.488489 CACGTTTTAGCAACTGCATACC 58.512 45.455 4.22 0.00 45.16 2.73
5735 10555 4.535526 ACAATCAAATTGCAAGTACCCC 57.464 40.909 4.94 0.00 43.98 4.95
5736 10556 3.260632 ACAATCAAATTGCAAGTACCCCC 59.739 43.478 4.94 0.00 43.98 5.40
5737 10557 1.540267 TCAAATTGCAAGTACCCCCG 58.460 50.000 4.94 0.00 0.00 5.73
5739 10559 1.254975 AAATTGCAAGTACCCCCGCC 61.255 55.000 4.94 0.00 0.00 6.13
5740 10560 2.150014 AATTGCAAGTACCCCCGCCT 62.150 55.000 4.94 0.00 0.00 5.52
5798 10618 3.279434 CCCCAACTATTGTGCCTACTTC 58.721 50.000 0.00 0.00 0.00 3.01
5799 10619 3.054361 CCCCAACTATTGTGCCTACTTCT 60.054 47.826 0.00 0.00 0.00 2.85
5800 10620 4.163458 CCCCAACTATTGTGCCTACTTCTA 59.837 45.833 0.00 0.00 0.00 2.10
5801 10621 5.163195 CCCCAACTATTGTGCCTACTTCTAT 60.163 44.000 0.00 0.00 0.00 1.98
5802 10622 6.357367 CCCAACTATTGTGCCTACTTCTATT 58.643 40.000 0.00 0.00 0.00 1.73
5803 10623 6.483640 CCCAACTATTGTGCCTACTTCTATTC 59.516 42.308 0.00 0.00 0.00 1.75
5804 10624 7.047891 CCAACTATTGTGCCTACTTCTATTCA 58.952 38.462 0.00 0.00 0.00 2.57
5805 10625 7.716998 CCAACTATTGTGCCTACTTCTATTCAT 59.283 37.037 0.00 0.00 0.00 2.57
5806 10626 9.113838 CAACTATTGTGCCTACTTCTATTCATT 57.886 33.333 0.00 0.00 0.00 2.57
5807 10627 9.686683 AACTATTGTGCCTACTTCTATTCATTT 57.313 29.630 0.00 0.00 0.00 2.32
5808 10628 9.331282 ACTATTGTGCCTACTTCTATTCATTTC 57.669 33.333 0.00 0.00 0.00 2.17
5809 10629 9.330063 CTATTGTGCCTACTTCTATTCATTTCA 57.670 33.333 0.00 0.00 0.00 2.69
5810 10630 7.994425 TTGTGCCTACTTCTATTCATTTCAA 57.006 32.000 0.00 0.00 0.00 2.69
5811 10631 8.579850 TTGTGCCTACTTCTATTCATTTCAAT 57.420 30.769 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 3.476419 ACCGGGCCACCTAATCCG 61.476 66.667 6.32 0.00 41.90 4.18
56 57 4.865925 CGTTAACGGAGGTATCATTGTTCA 59.134 41.667 20.24 0.00 35.37 3.18
120 121 4.186077 TCCCCGTTCTCTGATCTATCTT 57.814 45.455 0.00 0.00 0.00 2.40
163 164 0.467804 GCCCCAGCCACTTTGAAAAA 59.532 50.000 0.00 0.00 0.00 1.94
164 165 0.689080 TGCCCCAGCCACTTTGAAAA 60.689 50.000 0.00 0.00 38.69 2.29
165 166 0.689080 TTGCCCCAGCCACTTTGAAA 60.689 50.000 0.00 0.00 38.69 2.69
166 167 1.075674 TTGCCCCAGCCACTTTGAA 60.076 52.632 0.00 0.00 38.69 2.69
167 168 1.832167 GTTGCCCCAGCCACTTTGA 60.832 57.895 0.00 0.00 38.69 2.69
168 169 2.132996 TGTTGCCCCAGCCACTTTG 61.133 57.895 0.00 0.00 35.69 2.77
169 170 2.133641 GTGTTGCCCCAGCCACTTT 61.134 57.895 0.00 0.00 35.69 2.66
170 171 2.521708 GTGTTGCCCCAGCCACTT 60.522 61.111 0.00 0.00 35.69 3.16
171 172 4.603535 GGTGTTGCCCCAGCCACT 62.604 66.667 0.00 0.00 35.69 4.00
181 182 1.574702 GGAGTAAGTGGCGGTGTTGC 61.575 60.000 0.00 0.00 0.00 4.17
182 183 0.250124 TGGAGTAAGTGGCGGTGTTG 60.250 55.000 0.00 0.00 0.00 3.33
183 184 0.250166 GTGGAGTAAGTGGCGGTGTT 60.250 55.000 0.00 0.00 0.00 3.32
184 185 1.370064 GTGGAGTAAGTGGCGGTGT 59.630 57.895 0.00 0.00 0.00 4.16
185 186 1.375523 GGTGGAGTAAGTGGCGGTG 60.376 63.158 0.00 0.00 0.00 4.94
186 187 1.412453 TTGGTGGAGTAAGTGGCGGT 61.412 55.000 0.00 0.00 0.00 5.68
187 188 0.673644 CTTGGTGGAGTAAGTGGCGG 60.674 60.000 0.00 0.00 0.00 6.13
188 189 0.320374 TCTTGGTGGAGTAAGTGGCG 59.680 55.000 0.00 0.00 0.00 5.69
189 190 2.789409 ATCTTGGTGGAGTAAGTGGC 57.211 50.000 0.00 0.00 0.00 5.01
190 191 5.363868 TGATCTATCTTGGTGGAGTAAGTGG 59.636 44.000 0.00 0.00 0.00 4.00
191 192 6.322456 TCTGATCTATCTTGGTGGAGTAAGTG 59.678 42.308 0.00 0.00 0.00 3.16
192 193 6.436027 TCTGATCTATCTTGGTGGAGTAAGT 58.564 40.000 0.00 0.00 0.00 2.24
193 194 6.775142 TCTCTGATCTATCTTGGTGGAGTAAG 59.225 42.308 0.00 0.00 0.00 2.34
194 195 6.673583 TCTCTGATCTATCTTGGTGGAGTAA 58.326 40.000 0.00 0.00 0.00 2.24
195 196 6.267492 TCTCTGATCTATCTTGGTGGAGTA 57.733 41.667 0.00 0.00 0.00 2.59
196 197 5.136068 TCTCTGATCTATCTTGGTGGAGT 57.864 43.478 0.00 0.00 0.00 3.85
197 198 5.362143 TGTTCTCTGATCTATCTTGGTGGAG 59.638 44.000 0.00 0.00 0.00 3.86
198 199 5.272402 TGTTCTCTGATCTATCTTGGTGGA 58.728 41.667 0.00 0.00 0.00 4.02
199 200 5.453057 CCTGTTCTCTGATCTATCTTGGTGG 60.453 48.000 0.00 0.00 0.00 4.61
200 201 5.453057 CCCTGTTCTCTGATCTATCTTGGTG 60.453 48.000 0.00 0.00 0.00 4.17
201 202 4.653341 CCCTGTTCTCTGATCTATCTTGGT 59.347 45.833 0.00 0.00 0.00 3.67
202 203 4.898265 TCCCTGTTCTCTGATCTATCTTGG 59.102 45.833 0.00 0.00 0.00 3.61
203 204 6.462768 CCTTCCCTGTTCTCTGATCTATCTTG 60.463 46.154 0.00 0.00 0.00 3.02
204 205 5.602145 CCTTCCCTGTTCTCTGATCTATCTT 59.398 44.000 0.00 0.00 0.00 2.40
205 206 5.147032 CCTTCCCTGTTCTCTGATCTATCT 58.853 45.833 0.00 0.00 0.00 1.98
206 207 4.898861 ACCTTCCCTGTTCTCTGATCTATC 59.101 45.833 0.00 0.00 0.00 2.08
207 208 4.889780 ACCTTCCCTGTTCTCTGATCTAT 58.110 43.478 0.00 0.00 0.00 1.98
208 209 4.338795 ACCTTCCCTGTTCTCTGATCTA 57.661 45.455 0.00 0.00 0.00 1.98
209 210 3.197927 ACCTTCCCTGTTCTCTGATCT 57.802 47.619 0.00 0.00 0.00 2.75
210 211 4.027437 ACTACCTTCCCTGTTCTCTGATC 58.973 47.826 0.00 0.00 0.00 2.92
211 212 3.772025 CACTACCTTCCCTGTTCTCTGAT 59.228 47.826 0.00 0.00 0.00 2.90
212 213 3.165875 CACTACCTTCCCTGTTCTCTGA 58.834 50.000 0.00 0.00 0.00 3.27
213 214 2.354203 GCACTACCTTCCCTGTTCTCTG 60.354 54.545 0.00 0.00 0.00 3.35
214 215 1.903183 GCACTACCTTCCCTGTTCTCT 59.097 52.381 0.00 0.00 0.00 3.10
215 216 1.903183 AGCACTACCTTCCCTGTTCTC 59.097 52.381 0.00 0.00 0.00 2.87
216 217 2.031495 AGCACTACCTTCCCTGTTCT 57.969 50.000 0.00 0.00 0.00 3.01
217 218 2.565834 TGTAGCACTACCTTCCCTGTTC 59.434 50.000 5.40 0.00 35.26 3.18
218 219 2.567615 CTGTAGCACTACCTTCCCTGTT 59.432 50.000 5.40 0.00 35.26 3.16
219 220 2.180276 CTGTAGCACTACCTTCCCTGT 58.820 52.381 5.40 0.00 35.26 4.00
220 221 1.482593 CCTGTAGCACTACCTTCCCTG 59.517 57.143 5.40 0.00 35.26 4.45
221 222 1.622725 CCCTGTAGCACTACCTTCCCT 60.623 57.143 5.40 0.00 35.26 4.20
222 223 0.831307 CCCTGTAGCACTACCTTCCC 59.169 60.000 5.40 0.00 35.26 3.97
223 224 0.831307 CCCCTGTAGCACTACCTTCC 59.169 60.000 5.40 0.00 35.26 3.46
224 225 1.757699 CTCCCCTGTAGCACTACCTTC 59.242 57.143 5.40 0.00 35.26 3.46
225 226 1.622725 CCTCCCCTGTAGCACTACCTT 60.623 57.143 5.40 0.00 35.26 3.50
226 227 0.032017 CCTCCCCTGTAGCACTACCT 60.032 60.000 5.40 0.00 35.26 3.08
227 228 0.325390 ACCTCCCCTGTAGCACTACC 60.325 60.000 5.40 0.00 35.26 3.18
228 229 1.569653 AACCTCCCCTGTAGCACTAC 58.430 55.000 0.70 0.70 36.63 2.73
229 230 2.185387 GAAACCTCCCCTGTAGCACTA 58.815 52.381 0.00 0.00 0.00 2.74
230 231 0.984995 GAAACCTCCCCTGTAGCACT 59.015 55.000 0.00 0.00 0.00 4.40
231 232 0.984995 AGAAACCTCCCCTGTAGCAC 59.015 55.000 0.00 0.00 0.00 4.40
232 233 1.628846 GAAGAAACCTCCCCTGTAGCA 59.371 52.381 0.00 0.00 0.00 3.49
233 234 1.628846 TGAAGAAACCTCCCCTGTAGC 59.371 52.381 0.00 0.00 0.00 3.58
234 235 4.202472 ACTTTGAAGAAACCTCCCCTGTAG 60.202 45.833 0.00 0.00 0.00 2.74
235 236 3.720002 ACTTTGAAGAAACCTCCCCTGTA 59.280 43.478 0.00 0.00 0.00 2.74
236 237 2.514160 ACTTTGAAGAAACCTCCCCTGT 59.486 45.455 0.00 0.00 0.00 4.00
237 238 2.887152 CACTTTGAAGAAACCTCCCCTG 59.113 50.000 0.00 0.00 0.00 4.45
238 239 2.158460 CCACTTTGAAGAAACCTCCCCT 60.158 50.000 0.00 0.00 0.00 4.79
239 240 2.158519 TCCACTTTGAAGAAACCTCCCC 60.159 50.000 0.00 0.00 0.00 4.81
240 241 3.223674 TCCACTTTGAAGAAACCTCCC 57.776 47.619 0.00 0.00 0.00 4.30
241 242 5.562890 CGAAATCCACTTTGAAGAAACCTCC 60.563 44.000 0.00 0.00 0.00 4.30
242 243 5.008712 ACGAAATCCACTTTGAAGAAACCTC 59.991 40.000 0.00 0.00 0.00 3.85
243 244 4.887655 ACGAAATCCACTTTGAAGAAACCT 59.112 37.500 0.00 0.00 0.00 3.50
378 379 2.683867 CGACGAAGATCTGGGTTCTAGT 59.316 50.000 0.00 0.00 0.00 2.57
396 397 1.019278 TCGAAATGGCCTTGCTCGAC 61.019 55.000 17.30 0.00 33.87 4.20
426 427 4.261614 CCTTAGGCAAACTTGGTCTCAAAC 60.262 45.833 0.00 0.00 31.77 2.93
427 428 3.888930 CCTTAGGCAAACTTGGTCTCAAA 59.111 43.478 0.00 0.00 31.77 2.69
428 429 3.117663 ACCTTAGGCAAACTTGGTCTCAA 60.118 43.478 0.00 0.00 31.85 3.02
429 430 2.441750 ACCTTAGGCAAACTTGGTCTCA 59.558 45.455 0.00 0.00 31.85 3.27
430 431 3.141767 ACCTTAGGCAAACTTGGTCTC 57.858 47.619 0.00 0.00 31.85 3.36
431 432 3.222603 CAACCTTAGGCAAACTTGGTCT 58.777 45.455 0.00 0.00 34.93 3.85
432 433 2.288213 GCAACCTTAGGCAAACTTGGTC 60.288 50.000 0.00 0.00 34.93 4.02
433 434 1.686587 GCAACCTTAGGCAAACTTGGT 59.313 47.619 0.00 0.00 36.71 3.67
434 435 1.000843 GGCAACCTTAGGCAAACTTGG 59.999 52.381 0.00 0.00 0.00 3.61
435 436 1.686052 TGGCAACCTTAGGCAAACTTG 59.314 47.619 0.00 0.00 38.71 3.16
436 437 1.686587 GTGGCAACCTTAGGCAAACTT 59.313 47.619 0.00 0.00 43.50 2.66
437 438 1.328279 GTGGCAACCTTAGGCAAACT 58.672 50.000 0.00 0.00 43.50 2.66
438 439 1.036707 TGTGGCAACCTTAGGCAAAC 58.963 50.000 0.00 0.00 43.50 2.93
439 440 1.036707 GTGTGGCAACCTTAGGCAAA 58.963 50.000 0.00 0.00 43.50 3.68
440 441 0.825840 GGTGTGGCAACCTTAGGCAA 60.826 55.000 0.00 0.00 43.50 4.52
441 442 1.228429 GGTGTGGCAACCTTAGGCA 60.228 57.895 0.00 0.00 37.24 4.75
442 443 3.681473 GGTGTGGCAACCTTAGGC 58.319 61.111 0.00 0.00 37.24 3.93
448 449 2.433436 CTAACCTTAGGTGTGGCAACC 58.567 52.381 3.99 9.86 40.85 3.77
449 450 2.433436 CCTAACCTTAGGTGTGGCAAC 58.567 52.381 3.99 0.00 44.26 4.17
450 451 2.871096 CCTAACCTTAGGTGTGGCAA 57.129 50.000 3.99 0.00 44.26 4.52
459 460 3.435671 CGGTCAAACTTGCCTAACCTTAG 59.564 47.826 0.00 0.00 0.00 2.18
460 461 3.071312 TCGGTCAAACTTGCCTAACCTTA 59.929 43.478 0.00 0.00 0.00 2.69
461 462 2.158726 TCGGTCAAACTTGCCTAACCTT 60.159 45.455 0.00 0.00 0.00 3.50
462 463 1.418637 TCGGTCAAACTTGCCTAACCT 59.581 47.619 0.00 0.00 0.00 3.50
463 464 1.886886 TCGGTCAAACTTGCCTAACC 58.113 50.000 0.00 0.00 0.00 2.85
464 465 4.226761 CAAATCGGTCAAACTTGCCTAAC 58.773 43.478 0.00 0.00 0.00 2.34
465 466 3.254657 CCAAATCGGTCAAACTTGCCTAA 59.745 43.478 0.00 0.00 0.00 2.69
466 467 2.817258 CCAAATCGGTCAAACTTGCCTA 59.183 45.455 0.00 0.00 0.00 3.93
467 468 1.613437 CCAAATCGGTCAAACTTGCCT 59.387 47.619 0.00 0.00 0.00 4.75
468 469 1.336795 CCCAAATCGGTCAAACTTGCC 60.337 52.381 0.00 0.00 0.00 4.52
469 470 1.339929 ACCCAAATCGGTCAAACTTGC 59.660 47.619 0.00 0.00 0.00 4.01
470 471 2.288152 CCACCCAAATCGGTCAAACTTG 60.288 50.000 0.00 0.00 32.17 3.16
471 472 1.960689 CCACCCAAATCGGTCAAACTT 59.039 47.619 0.00 0.00 32.17 2.66
472 473 1.616159 CCACCCAAATCGGTCAAACT 58.384 50.000 0.00 0.00 32.17 2.66
473 474 0.601057 CCCACCCAAATCGGTCAAAC 59.399 55.000 0.00 0.00 32.17 2.93
474 475 0.186386 ACCCACCCAAATCGGTCAAA 59.814 50.000 0.00 0.00 32.17 2.69
475 476 0.538516 CACCCACCCAAATCGGTCAA 60.539 55.000 0.00 0.00 32.17 3.18
476 477 1.074072 CACCCACCCAAATCGGTCA 59.926 57.895 0.00 0.00 32.17 4.02
477 478 0.538746 AACACCCACCCAAATCGGTC 60.539 55.000 0.00 0.00 32.17 4.79
478 479 0.105913 AAACACCCACCCAAATCGGT 60.106 50.000 0.00 0.00 36.18 4.69
479 480 0.316841 CAAACACCCACCCAAATCGG 59.683 55.000 0.00 0.00 0.00 4.18
480 481 0.316841 CCAAACACCCACCCAAATCG 59.683 55.000 0.00 0.00 0.00 3.34
481 482 1.419381 ACCAAACACCCACCCAAATC 58.581 50.000 0.00 0.00 0.00 2.17
482 483 1.765904 GAACCAAACACCCACCCAAAT 59.234 47.619 0.00 0.00 0.00 2.32
483 484 1.196012 GAACCAAACACCCACCCAAA 58.804 50.000 0.00 0.00 0.00 3.28
484 485 0.041238 TGAACCAAACACCCACCCAA 59.959 50.000 0.00 0.00 0.00 4.12
485 486 0.041238 TTGAACCAAACACCCACCCA 59.959 50.000 0.00 0.00 0.00 4.51
486 487 0.750249 CTTGAACCAAACACCCACCC 59.250 55.000 0.00 0.00 0.00 4.61
487 488 0.104120 GCTTGAACCAAACACCCACC 59.896 55.000 0.00 0.00 0.00 4.61
488 489 0.104120 GGCTTGAACCAAACACCCAC 59.896 55.000 0.00 0.00 0.00 4.61
489 490 0.324738 TGGCTTGAACCAAACACCCA 60.325 50.000 0.00 0.00 36.55 4.51
490 491 0.104120 GTGGCTTGAACCAAACACCC 59.896 55.000 0.00 0.00 42.70 4.61
491 492 0.820871 TGTGGCTTGAACCAAACACC 59.179 50.000 0.00 0.00 42.70 4.16
492 493 1.921243 GTGTGGCTTGAACCAAACAC 58.079 50.000 0.00 0.00 45.87 3.32
494 495 1.111277 AGGTGTGGCTTGAACCAAAC 58.889 50.000 0.00 0.00 45.86 2.93
495 496 1.859302 AAGGTGTGGCTTGAACCAAA 58.141 45.000 0.00 0.00 42.70 3.28
496 497 2.582052 CTAAGGTGTGGCTTGAACCAA 58.418 47.619 0.00 0.00 42.70 3.67
497 498 1.202879 CCTAAGGTGTGGCTTGAACCA 60.203 52.381 0.00 0.00 36.37 3.67
498 499 1.534729 CCTAAGGTGTGGCTTGAACC 58.465 55.000 0.00 0.00 0.00 3.62
499 500 0.881796 GCCTAAGGTGTGGCTTGAAC 59.118 55.000 0.00 0.00 45.26 3.18
500 501 3.339547 GCCTAAGGTGTGGCTTGAA 57.660 52.632 0.00 0.00 45.26 2.69
506 507 1.074775 TGGCTTGCCTAAGGTGTGG 59.925 57.895 13.18 0.00 34.40 4.17
507 508 0.537143 TGTGGCTTGCCTAAGGTGTG 60.537 55.000 13.18 0.00 34.40 3.82
508 509 0.537371 GTGTGGCTTGCCTAAGGTGT 60.537 55.000 13.18 0.00 34.40 4.16
509 510 0.250901 AGTGTGGCTTGCCTAAGGTG 60.251 55.000 13.18 0.00 34.40 4.00
510 511 1.279271 CTAGTGTGGCTTGCCTAAGGT 59.721 52.381 13.18 0.00 34.40 3.50
511 512 1.407437 CCTAGTGTGGCTTGCCTAAGG 60.407 57.143 13.18 8.19 34.40 2.69
512 513 1.407437 CCCTAGTGTGGCTTGCCTAAG 60.407 57.143 13.18 3.40 36.97 2.18
513 514 0.618458 CCCTAGTGTGGCTTGCCTAA 59.382 55.000 13.18 0.00 0.00 2.69
514 515 0.546747 ACCCTAGTGTGGCTTGCCTA 60.547 55.000 13.18 0.00 0.00 3.93
515 516 1.842381 GACCCTAGTGTGGCTTGCCT 61.842 60.000 13.18 0.00 0.00 4.75
516 517 1.377333 GACCCTAGTGTGGCTTGCC 60.377 63.158 4.43 4.43 0.00 4.52
517 518 1.377333 GGACCCTAGTGTGGCTTGC 60.377 63.158 0.00 0.00 0.00 4.01
518 519 1.299976 GGGACCCTAGTGTGGCTTG 59.700 63.158 2.09 0.00 0.00 4.01
519 520 1.151899 TGGGACCCTAGTGTGGCTT 60.152 57.895 13.00 0.00 0.00 4.35
520 521 1.918800 GTGGGACCCTAGTGTGGCT 60.919 63.158 13.00 0.00 0.00 4.75
521 522 1.562672 ATGTGGGACCCTAGTGTGGC 61.563 60.000 13.00 0.00 0.00 5.01
522 523 0.541863 GATGTGGGACCCTAGTGTGG 59.458 60.000 13.00 0.00 0.00 4.17
523 524 1.066143 GTGATGTGGGACCCTAGTGTG 60.066 57.143 13.00 0.00 0.00 3.82
524 525 1.276622 GTGATGTGGGACCCTAGTGT 58.723 55.000 13.00 0.00 0.00 3.55
525 526 1.275666 TGTGATGTGGGACCCTAGTG 58.724 55.000 13.00 0.00 0.00 2.74
526 527 2.270434 ATGTGATGTGGGACCCTAGT 57.730 50.000 13.00 0.00 0.00 2.57
527 528 3.038280 TGTATGTGATGTGGGACCCTAG 58.962 50.000 13.00 0.00 0.00 3.02
528 529 3.123392 TGTATGTGATGTGGGACCCTA 57.877 47.619 13.00 0.73 0.00 3.53
529 530 1.965414 TGTATGTGATGTGGGACCCT 58.035 50.000 13.00 0.00 0.00 4.34
530 531 3.214328 GAATGTATGTGATGTGGGACCC 58.786 50.000 2.45 2.45 0.00 4.46
531 532 3.884895 TGAATGTATGTGATGTGGGACC 58.115 45.455 0.00 0.00 0.00 4.46
532 533 5.895636 TTTGAATGTATGTGATGTGGGAC 57.104 39.130 0.00 0.00 0.00 4.46
533 534 6.493115 ACTTTTTGAATGTATGTGATGTGGGA 59.507 34.615 0.00 0.00 0.00 4.37
534 535 6.587226 CACTTTTTGAATGTATGTGATGTGGG 59.413 38.462 0.00 0.00 0.00 4.61
535 536 7.115236 CACACTTTTTGAATGTATGTGATGTGG 59.885 37.037 0.00 0.00 0.00 4.17
536 537 7.115236 CCACACTTTTTGAATGTATGTGATGTG 59.885 37.037 3.14 0.00 0.00 3.21
537 538 7.147312 CCACACTTTTTGAATGTATGTGATGT 58.853 34.615 3.14 0.00 0.00 3.06
538 539 6.089820 GCCACACTTTTTGAATGTATGTGATG 59.910 38.462 3.14 0.00 0.00 3.07
539 540 6.158598 GCCACACTTTTTGAATGTATGTGAT 58.841 36.000 3.14 0.00 0.00 3.06
540 541 5.068329 TGCCACACTTTTTGAATGTATGTGA 59.932 36.000 3.14 0.00 0.00 3.58
541 542 5.288015 TGCCACACTTTTTGAATGTATGTG 58.712 37.500 0.00 0.00 0.00 3.21
542 543 5.528043 TGCCACACTTTTTGAATGTATGT 57.472 34.783 0.00 0.00 0.00 2.29
543 544 6.215121 TCTTGCCACACTTTTTGAATGTATG 58.785 36.000 0.00 0.00 0.00 2.39
544 545 6.403866 TCTTGCCACACTTTTTGAATGTAT 57.596 33.333 0.00 0.00 0.00 2.29
545 546 5.843673 TCTTGCCACACTTTTTGAATGTA 57.156 34.783 0.00 0.00 0.00 2.29
546 547 4.734398 TCTTGCCACACTTTTTGAATGT 57.266 36.364 0.00 0.00 0.00 2.71
547 548 5.178067 GGAATCTTGCCACACTTTTTGAATG 59.822 40.000 0.00 0.00 0.00 2.67
548 549 5.070847 AGGAATCTTGCCACACTTTTTGAAT 59.929 36.000 0.00 0.00 0.00 2.57
549 550 4.405358 AGGAATCTTGCCACACTTTTTGAA 59.595 37.500 0.00 0.00 0.00 2.69
550 551 3.960102 AGGAATCTTGCCACACTTTTTGA 59.040 39.130 0.00 0.00 0.00 2.69
551 552 4.326504 AGGAATCTTGCCACACTTTTTG 57.673 40.909 0.00 0.00 0.00 2.44
552 553 5.357742 AAAGGAATCTTGCCACACTTTTT 57.642 34.783 0.00 0.00 32.75 1.94
553 554 5.011023 CCTAAAGGAATCTTGCCACACTTTT 59.989 40.000 0.00 0.00 37.39 2.27
554 555 4.524328 CCTAAAGGAATCTTGCCACACTTT 59.476 41.667 0.00 0.00 37.39 2.66
555 556 4.082125 CCTAAAGGAATCTTGCCACACTT 58.918 43.478 0.00 0.00 37.39 3.16
556 557 3.690460 CCTAAAGGAATCTTGCCACACT 58.310 45.455 0.00 0.00 37.39 3.55
557 558 2.164422 GCCTAAAGGAATCTTGCCACAC 59.836 50.000 0.00 0.00 37.39 3.82
558 559 2.041620 AGCCTAAAGGAATCTTGCCACA 59.958 45.455 0.00 0.00 37.39 4.17
559 560 2.728007 AGCCTAAAGGAATCTTGCCAC 58.272 47.619 0.00 0.00 37.39 5.01
560 561 3.091545 CAAGCCTAAAGGAATCTTGCCA 58.908 45.455 0.00 0.00 37.39 4.92
561 562 2.159184 GCAAGCCTAAAGGAATCTTGCC 60.159 50.000 20.51 9.38 45.16 4.52
562 563 3.156511 GCAAGCCTAAAGGAATCTTGC 57.843 47.619 18.12 18.12 44.95 4.01
563 564 3.091545 TGGCAAGCCTAAAGGAATCTTG 58.908 45.455 12.96 5.47 36.51 3.02
564 565 3.456380 TGGCAAGCCTAAAGGAATCTT 57.544 42.857 12.96 0.00 37.39 2.40
565 566 3.092301 GTTGGCAAGCCTAAAGGAATCT 58.908 45.455 12.96 0.00 37.39 2.40
566 567 3.092301 AGTTGGCAAGCCTAAAGGAATC 58.908 45.455 12.96 0.00 37.39 2.52
567 568 3.175438 AGTTGGCAAGCCTAAAGGAAT 57.825 42.857 12.96 0.00 37.39 3.01
568 569 2.627699 CAAGTTGGCAAGCCTAAAGGAA 59.372 45.455 12.96 0.00 37.39 3.36
569 570 2.238521 CAAGTTGGCAAGCCTAAAGGA 58.761 47.619 12.96 0.00 37.39 3.36
570 571 1.963515 ACAAGTTGGCAAGCCTAAAGG 59.036 47.619 12.96 2.23 36.94 3.11
571 572 3.383761 CAACAAGTTGGCAAGCCTAAAG 58.616 45.455 12.96 1.17 36.95 1.85
572 573 2.482839 GCAACAAGTTGGCAAGCCTAAA 60.483 45.455 12.96 0.00 40.74 1.85
573 574 1.068434 GCAACAAGTTGGCAAGCCTAA 59.932 47.619 12.96 2.46 40.74 2.69
574 575 0.673437 GCAACAAGTTGGCAAGCCTA 59.327 50.000 12.96 1.22 40.74 3.93
575 576 1.044790 AGCAACAAGTTGGCAAGCCT 61.045 50.000 12.96 0.00 40.74 4.58
576 577 0.598419 GAGCAACAAGTTGGCAAGCC 60.598 55.000 14.16 3.61 40.74 4.35
577 578 0.386838 AGAGCAACAAGTTGGCAAGC 59.613 50.000 14.16 0.00 40.74 4.01
578 579 2.877043 AAGAGCAACAAGTTGGCAAG 57.123 45.000 14.16 0.00 40.74 4.01
579 580 4.935352 AATAAGAGCAACAAGTTGGCAA 57.065 36.364 14.16 0.00 40.74 4.52
580 581 4.935352 AAATAAGAGCAACAAGTTGGCA 57.065 36.364 14.16 0.00 40.74 4.92
581 582 7.707774 TTTAAAATAAGAGCAACAAGTTGGC 57.292 32.000 14.16 1.73 40.74 4.52
604 605 6.183360 GCCACACTTGTCTAAGGTTAGTTTTT 60.183 38.462 0.00 0.00 38.26 1.94
605 606 5.298527 GCCACACTTGTCTAAGGTTAGTTTT 59.701 40.000 0.00 0.00 38.26 2.43
606 607 4.820173 GCCACACTTGTCTAAGGTTAGTTT 59.180 41.667 0.00 0.00 38.26 2.66
607 608 4.141574 TGCCACACTTGTCTAAGGTTAGTT 60.142 41.667 0.00 0.00 38.26 2.24
608 609 3.389983 TGCCACACTTGTCTAAGGTTAGT 59.610 43.478 0.00 0.00 38.26 2.24
609 610 4.002906 TGCCACACTTGTCTAAGGTTAG 57.997 45.455 0.00 0.00 38.26 2.34
610 611 4.131596 GTTGCCACACTTGTCTAAGGTTA 58.868 43.478 0.00 0.00 38.26 2.85
611 612 2.949644 GTTGCCACACTTGTCTAAGGTT 59.050 45.455 0.00 0.00 38.26 3.50
612 613 2.092646 TGTTGCCACACTTGTCTAAGGT 60.093 45.455 0.00 0.00 38.26 3.50
613 614 2.571212 TGTTGCCACACTTGTCTAAGG 58.429 47.619 0.00 0.00 38.26 2.69
614 615 4.036734 ACAATGTTGCCACACTTGTCTAAG 59.963 41.667 10.72 0.00 35.03 2.18
615 616 3.951037 ACAATGTTGCCACACTTGTCTAA 59.049 39.130 10.72 0.00 35.03 2.10
616 617 3.550820 ACAATGTTGCCACACTTGTCTA 58.449 40.909 10.72 0.00 35.03 2.59
617 618 2.378038 ACAATGTTGCCACACTTGTCT 58.622 42.857 10.72 0.00 35.03 3.41
618 619 2.869233 ACAATGTTGCCACACTTGTC 57.131 45.000 10.72 0.00 35.03 3.18
619 620 3.005684 CCATACAATGTTGCCACACTTGT 59.994 43.478 16.82 16.82 37.85 3.16
620 621 3.577667 CCATACAATGTTGCCACACTTG 58.422 45.455 0.00 2.61 35.03 3.16
621 622 2.029110 GCCATACAATGTTGCCACACTT 60.029 45.455 0.00 0.00 35.03 3.16
622 623 1.545582 GCCATACAATGTTGCCACACT 59.454 47.619 0.00 0.00 35.03 3.55
623 624 1.271934 TGCCATACAATGTTGCCACAC 59.728 47.619 0.00 0.00 35.03 3.82
624 625 1.625511 TGCCATACAATGTTGCCACA 58.374 45.000 0.00 0.00 37.31 4.17
625 626 2.739885 TTGCCATACAATGTTGCCAC 57.260 45.000 0.00 0.00 31.73 5.01
626 627 2.632028 ACTTTGCCATACAATGTTGCCA 59.368 40.909 0.00 0.00 42.31 4.92
627 628 2.995258 CACTTTGCCATACAATGTTGCC 59.005 45.455 0.00 0.00 42.31 4.52
628 629 3.429543 CACACTTTGCCATACAATGTTGC 59.570 43.478 0.00 0.00 42.31 4.17
629 630 3.989167 CCACACTTTGCCATACAATGTTG 59.011 43.478 0.00 0.00 42.31 3.33
630 631 3.554752 GCCACACTTTGCCATACAATGTT 60.555 43.478 0.00 0.00 42.31 2.71
631 632 2.029110 GCCACACTTTGCCATACAATGT 60.029 45.455 0.00 0.00 44.92 2.71
632 633 2.029200 TGCCACACTTTGCCATACAATG 60.029 45.455 0.00 0.00 38.31 2.82
633 634 2.246469 TGCCACACTTTGCCATACAAT 58.754 42.857 0.00 0.00 38.31 2.71
634 635 1.697284 TGCCACACTTTGCCATACAA 58.303 45.000 0.00 0.00 36.13 2.41
635 636 1.545136 CATGCCACACTTTGCCATACA 59.455 47.619 0.00 0.00 0.00 2.29
636 637 1.135024 CCATGCCACACTTTGCCATAC 60.135 52.381 0.00 0.00 0.00 2.39
637 638 1.184431 CCATGCCACACTTTGCCATA 58.816 50.000 0.00 0.00 0.00 2.74
638 639 0.832983 ACCATGCCACACTTTGCCAT 60.833 50.000 0.00 0.00 0.00 4.40
639 640 1.047596 AACCATGCCACACTTTGCCA 61.048 50.000 0.00 0.00 0.00 4.92
640 641 0.965439 TAACCATGCCACACTTTGCC 59.035 50.000 0.00 0.00 0.00 4.52
641 642 1.067635 CCTAACCATGCCACACTTTGC 60.068 52.381 0.00 0.00 0.00 3.68
642 643 1.067635 GCCTAACCATGCCACACTTTG 60.068 52.381 0.00 0.00 0.00 2.77
643 644 1.256812 GCCTAACCATGCCACACTTT 58.743 50.000 0.00 0.00 0.00 2.66
644 645 2.961424 GCCTAACCATGCCACACTT 58.039 52.632 0.00 0.00 0.00 3.16
645 646 4.743018 GCCTAACCATGCCACACT 57.257 55.556 0.00 0.00 0.00 3.55
651 652 3.492102 TGATTCTAGGCCTAACCATGC 57.508 47.619 14.85 2.26 43.14 4.06
652 653 3.817647 GCTTGATTCTAGGCCTAACCATG 59.182 47.826 14.85 11.54 43.14 3.66
653 654 3.181439 GGCTTGATTCTAGGCCTAACCAT 60.181 47.826 14.85 5.83 43.14 3.55
654 655 2.172717 GGCTTGATTCTAGGCCTAACCA 59.827 50.000 14.85 6.46 43.14 3.67
655 656 2.852449 GGCTTGATTCTAGGCCTAACC 58.148 52.381 14.85 3.85 41.20 2.85
661 662 3.577805 TTTAGGGGCTTGATTCTAGGC 57.422 47.619 12.20 12.20 37.45 3.93
662 663 5.239525 CGAAATTTAGGGGCTTGATTCTAGG 59.760 44.000 0.00 0.00 0.00 3.02
663 664 6.055588 TCGAAATTTAGGGGCTTGATTCTAG 58.944 40.000 0.00 0.00 0.00 2.43
664 665 5.996644 TCGAAATTTAGGGGCTTGATTCTA 58.003 37.500 0.00 0.00 0.00 2.10
665 666 4.855340 TCGAAATTTAGGGGCTTGATTCT 58.145 39.130 0.00 0.00 0.00 2.40
666 667 5.576447 TTCGAAATTTAGGGGCTTGATTC 57.424 39.130 0.00 0.00 0.00 2.52
667 668 5.163416 CCATTCGAAATTTAGGGGCTTGATT 60.163 40.000 0.00 0.00 0.00 2.57
668 669 4.342092 CCATTCGAAATTTAGGGGCTTGAT 59.658 41.667 0.00 0.00 0.00 2.57
669 670 3.699038 CCATTCGAAATTTAGGGGCTTGA 59.301 43.478 0.00 0.00 0.00 3.02
670 671 3.181476 CCCATTCGAAATTTAGGGGCTTG 60.181 47.826 0.00 0.00 32.59 4.01
671 672 3.031013 CCCATTCGAAATTTAGGGGCTT 58.969 45.455 0.00 0.00 32.59 4.35
672 673 2.243736 TCCCATTCGAAATTTAGGGGCT 59.756 45.455 17.39 0.00 36.92 5.19
673 674 2.361119 GTCCCATTCGAAATTTAGGGGC 59.639 50.000 17.39 14.11 36.92 5.80
674 675 3.626930 TGTCCCATTCGAAATTTAGGGG 58.373 45.455 17.39 9.57 36.92 4.79
675 676 4.440112 GCTTGTCCCATTCGAAATTTAGGG 60.440 45.833 0.00 9.12 37.65 3.53
676 677 4.399303 AGCTTGTCCCATTCGAAATTTAGG 59.601 41.667 0.00 0.00 0.00 2.69
700 701 2.660064 GGCCCGGATGACAGACAGT 61.660 63.158 0.73 0.00 0.00 3.55
987 988 2.743538 GCCATGTGCTCTGCGTCA 60.744 61.111 0.00 0.00 36.87 4.35
1220 1221 1.133869 CCGCGCGAAAACCCTTAAG 59.866 57.895 34.63 5.49 0.00 1.85
1237 1238 1.545841 GAACTTCCCCCATCACAACC 58.454 55.000 0.00 0.00 0.00 3.77
1247 1248 4.779993 ATATGAGACTTGGAACTTCCCC 57.220 45.455 5.30 0.00 35.03 4.81
1254 1255 5.729229 TCCAAACCCTATATGAGACTTGGAA 59.271 40.000 7.54 0.00 35.61 3.53
1257 1258 5.131142 ACCTCCAAACCCTATATGAGACTTG 59.869 44.000 0.00 0.00 0.00 3.16
1258 1259 5.289510 ACCTCCAAACCCTATATGAGACTT 58.710 41.667 0.00 0.00 0.00 3.01
1267 1268 2.725227 TCCCAAAACCTCCAAACCCTAT 59.275 45.455 0.00 0.00 0.00 2.57
1280 1281 2.491897 AACCCCGCGTTCCCAAAAC 61.492 57.895 4.92 0.00 0.00 2.43
1292 1293 0.035458 AGAAGACTTCTGCAACCCCG 59.965 55.000 17.02 0.00 38.91 5.73
1315 1316 4.279922 CCAGAACGAAACCCCAATTAAACT 59.720 41.667 0.00 0.00 0.00 2.66
1347 1348 8.679725 ACTAATCAGGACACTCTCCCTATTATA 58.320 37.037 0.00 0.00 40.53 0.98
1418 1423 6.016024 ACATTAATATATGGCTTGCAGGTGTG 60.016 38.462 0.00 0.00 0.00 3.82
1435 1440 9.337396 GACTCATTCCAATACCACACATTAATA 57.663 33.333 0.00 0.00 0.00 0.98
1462 1467 9.333497 CAAATAGTATGTAAATGCCATCGATTG 57.667 33.333 0.00 0.00 0.00 2.67
1480 1485 9.013229 CATATAGCCCAAATCAAGCAAATAGTA 57.987 33.333 0.00 0.00 0.00 1.82
1974 1993 6.927381 AGAAAAGACAATCAAGGCATGAAAAG 59.073 34.615 0.00 0.00 42.54 2.27
1992 2011 8.379902 GCGAGAAACAAAATTTGAAAGAAAAGA 58.620 29.630 13.19 0.00 0.00 2.52
2017 2036 6.668541 ATGTGAAGTCATAACTACACATGC 57.331 37.500 0.00 0.00 43.85 4.06
2070 2089 7.364522 ACTACACTATTACACAAGCAACATG 57.635 36.000 0.00 0.00 0.00 3.21
2321 5657 4.141135 TCAAGAGAGAGGGGAGATAACGAT 60.141 45.833 0.00 0.00 0.00 3.73
2335 5675 9.671279 TGTCTATGCATAAATTTTCAAGAGAGA 57.329 29.630 8.00 0.00 0.00 3.10
2420 5768 7.360691 CGATGATGGATTGCTAAAGGAGTTATG 60.361 40.741 0.00 0.00 0.00 1.90
2455 5803 6.527423 ACGACTCACCAAAAACCTATTAAGA 58.473 36.000 0.00 0.00 0.00 2.10
2659 6007 3.160679 CAGGACCCTGGAATTTTCAGT 57.839 47.619 8.17 0.00 40.17 3.41
2672 6020 1.196012 CTCTAAGTGGACCAGGACCC 58.804 60.000 5.40 0.62 0.00 4.46
2686 6034 5.788533 TCTTTACCCTTGGTGGAATCTCTAA 59.211 40.000 0.00 0.00 36.19 2.10
2706 6054 9.914131 GCAAAGAACTTAAATGGAGTTATCTTT 57.086 29.630 0.00 0.00 37.46 2.52
2774 6123 1.597854 CTGTGAACCTTGCAGGCGA 60.598 57.895 2.50 0.00 39.63 5.54
2884 6233 3.027419 GCAGAAAAGGTGACCTGCT 57.973 52.632 4.15 0.00 46.04 4.24
2895 6244 6.863275 TCTATCGTGACTAGAATGCAGAAAA 58.137 36.000 0.00 0.00 0.00 2.29
3018 6376 5.913946 ATATTTTGGGAAGGAGGGAGTAG 57.086 43.478 0.00 0.00 0.00 2.57
3098 6456 4.359105 TCTTATATTATGGGACGGAGGGG 58.641 47.826 0.00 0.00 0.00 4.79
3101 6459 6.591750 ACACTCTTATATTATGGGACGGAG 57.408 41.667 0.00 0.00 0.00 4.63
3102 6460 6.989155 AACACTCTTATATTATGGGACGGA 57.011 37.500 0.00 0.00 0.00 4.69
3141 6920 7.855904 CCCATAATATAAGAGCGTTTTTGACAC 59.144 37.037 0.00 0.00 0.00 3.67
3333 7113 1.265905 CCTTCCCAAAATATACGGCGC 59.734 52.381 6.90 0.00 0.00 6.53
3338 7118 9.862149 TTCTATTTCCTCCTTCCCAAAATATAC 57.138 33.333 0.00 0.00 0.00 1.47
3340 7120 9.426534 CTTTCTATTTCCTCCTTCCCAAAATAT 57.573 33.333 0.00 0.00 0.00 1.28
3359 7355 9.953565 TGTTAACTAACTGGTAATGCTTTCTAT 57.046 29.630 7.22 0.00 37.12 1.98
3448 7446 0.857935 GAGAATCTTCAGCGGCATCG 59.142 55.000 1.45 0.00 39.81 3.84
3525 7523 1.685820 GGCCTTGTTACAGCCTCCT 59.314 57.895 8.18 0.00 43.62 3.69
3549 7547 4.695455 CACACAAATTCAGTAGATTCCGGT 59.305 41.667 0.00 0.00 0.00 5.28
3589 7587 3.007940 TGAGTTTCGGATGGACAGTTCAT 59.992 43.478 0.00 0.00 0.00 2.57
3604 7602 6.410540 AGGAGATGGTAAGACAATGAGTTTC 58.589 40.000 0.00 0.00 0.00 2.78
3673 7671 5.865552 GCTGCATGCCTATTAAACATAATGG 59.134 40.000 16.68 0.00 35.15 3.16
3827 8091 1.620323 AGCCTTTTAAAGCAAGGGCAG 59.380 47.619 9.81 0.00 44.61 4.85
4021 8657 5.741388 AAGTCTGTCATGATAAAATCCGC 57.259 39.130 0.00 0.00 0.00 5.54
4022 8658 8.023128 ACAAAAAGTCTGTCATGATAAAATCCG 58.977 33.333 0.00 0.00 0.00 4.18
4089 8725 3.150848 TGAGACCAATCAATCGACTCG 57.849 47.619 0.00 0.00 0.00 4.18
4204 9003 5.995282 ACAGTATTTGATGAAGTCACCGAAA 59.005 36.000 0.00 0.00 36.32 3.46
4207 9006 5.639506 AGAACAGTATTTGATGAAGTCACCG 59.360 40.000 0.00 0.00 36.32 4.94
4219 9018 7.592938 TGCCATTAGTTTCAGAACAGTATTTG 58.407 34.615 0.00 0.00 38.26 2.32
4304 9103 9.843874 GGTTTGTTTTCATCGAAATTTACTTTC 57.156 29.630 0.00 0.00 39.96 2.62
4993 9795 2.334307 GCTTCTGCCAAGCACAAGA 58.666 52.632 11.64 0.00 36.84 3.02
5094 9904 1.826487 ACACGTCCTTGGCCAAACC 60.826 57.895 20.91 9.03 39.84 3.27
5095 9905 1.358759 CACACGTCCTTGGCCAAAC 59.641 57.895 20.91 14.83 0.00 2.93
5096 9906 1.826054 CCACACGTCCTTGGCCAAA 60.826 57.895 20.91 1.92 0.00 3.28
5097 9907 2.203280 CCACACGTCCTTGGCCAA 60.203 61.111 19.25 19.25 0.00 4.52
5098 9908 3.484806 ACCACACGTCCTTGGCCA 61.485 61.111 0.00 0.00 36.20 5.36
5099 9909 2.951475 TTCACCACACGTCCTTGGCC 62.951 60.000 0.00 0.00 36.20 5.36
5100 9910 1.507141 CTTCACCACACGTCCTTGGC 61.507 60.000 7.19 0.00 36.20 4.52
5101 9911 1.507141 GCTTCACCACACGTCCTTGG 61.507 60.000 5.93 5.93 39.00 3.61
5286 10096 7.535139 ACACAGTATCCAAAAATTGTATTCCG 58.465 34.615 0.00 0.00 0.00 4.30
5428 10242 2.287009 GCAGTTGCTAAAACGTGCTTCT 60.287 45.455 0.00 0.00 38.21 2.85
5661 10481 8.829612 CATGCAATACTTGTAGTCATACATGAA 58.170 33.333 0.00 0.00 41.49 2.57
5751 10571 1.823610 GGGCTTACGGTGAAGAGTACT 59.176 52.381 0.00 0.00 0.00 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.