Multiple sequence alignment - TraesCS1D01G120400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G120400 chr1D 100.000 2656 0 0 1 2656 118928898 118926243 0.000000e+00 4905.0
1 TraesCS1D01G120400 chr1D 92.411 224 16 1 1 224 222014605 222014827 4.270000e-83 318.0
2 TraesCS1D01G120400 chr1D 90.625 224 19 2 1 224 487335587 487335808 2.000000e-76 296.0
3 TraesCS1D01G120400 chr6D 88.851 2072 174 27 305 2349 102988193 102986152 0.000000e+00 2494.0
4 TraesCS1D01G120400 chr5B 89.921 1637 148 13 305 1935 222414377 222412752 0.000000e+00 2093.0
5 TraesCS1D01G120400 chr5B 90.063 634 42 6 1915 2531 222412741 222412112 0.000000e+00 802.0
6 TraesCS1D01G120400 chr2D 89.988 1648 123 24 302 1930 42734371 42735995 0.000000e+00 2091.0
7 TraesCS1D01G120400 chr2D 89.344 610 41 6 1923 2531 42736857 42737443 0.000000e+00 745.0
8 TraesCS1D01G120400 chr5D 83.869 1711 189 35 903 2531 134148505 134150210 0.000000e+00 1550.0
9 TraesCS1D01G120400 chr4A 87.972 1272 130 12 302 1553 658126534 658125266 0.000000e+00 1480.0
10 TraesCS1D01G120400 chr4A 97.059 34 1 0 2593 2626 717815768 717815735 1.030000e-04 58.4
11 TraesCS1D01G120400 chr7A 85.519 1243 129 26 1032 2245 669947 671167 0.000000e+00 1251.0
12 TraesCS1D01G120400 chr7A 88.710 62 6 1 2595 2656 10868677 10868737 1.020000e-09 75.0
13 TraesCS1D01G120400 chr3B 87.523 1090 120 7 302 1389 713348167 713349242 0.000000e+00 1245.0
14 TraesCS1D01G120400 chr3B 92.143 280 18 4 2123 2400 713389339 713389616 2.480000e-105 392.0
15 TraesCS1D01G120400 chr3B 90.991 222 19 1 1 222 807122830 807122610 5.560000e-77 298.0
16 TraesCS1D01G120400 chr5A 83.871 1023 93 21 1280 2245 31601417 31602424 0.000000e+00 909.0
17 TraesCS1D01G120400 chr5A 83.871 1023 93 21 1280 2245 31632403 31633410 0.000000e+00 909.0
18 TraesCS1D01G120400 chr5A 83.871 1023 93 21 1280 2245 31666420 31667427 0.000000e+00 909.0
19 TraesCS1D01G120400 chr5A 83.757 1022 96 19 1280 2245 31719606 31720613 0.000000e+00 904.0
20 TraesCS1D01G120400 chr5A 83.757 1022 96 19 1280 2245 31750385 31751392 0.000000e+00 904.0
21 TraesCS1D01G120400 chr5A 83.757 1022 96 19 1280 2245 31899778 31900785 0.000000e+00 904.0
22 TraesCS1D01G120400 chr5A 86.220 254 29 4 2279 2531 31602499 31602747 1.210000e-68 270.0
23 TraesCS1D01G120400 chr5A 86.220 254 29 4 2279 2531 31633486 31633734 1.210000e-68 270.0
24 TraesCS1D01G120400 chr5A 86.220 254 29 4 2279 2531 31667502 31667750 1.210000e-68 270.0
25 TraesCS1D01G120400 chr5A 86.220 254 29 4 2279 2531 31720688 31720936 1.210000e-68 270.0
26 TraesCS1D01G120400 chr5A 86.220 254 29 4 2279 2531 31751467 31751715 1.210000e-68 270.0
27 TraesCS1D01G120400 chrUn 83.773 1023 94 23 1280 2245 278959804 278960811 0.000000e+00 904.0
28 TraesCS1D01G120400 chrUn 85.471 764 74 16 1280 2021 444511831 444512579 0.000000e+00 761.0
29 TraesCS1D01G120400 chrUn 86.220 254 29 4 2279 2531 278960886 278961134 1.210000e-68 270.0
30 TraesCS1D01G120400 chrUn 86.220 254 29 4 2279 2531 383148469 383148717 1.210000e-68 270.0
31 TraesCS1D01G120400 chr2B 78.493 730 115 25 1600 2313 142392117 142391414 8.730000e-120 440.0
32 TraesCS1D01G120400 chr2B 85.256 156 17 3 528 677 778991421 778991576 3.540000e-34 156.0
33 TraesCS1D01G120400 chr1A 91.964 224 17 1 1 224 561041378 561041600 1.980000e-81 313.0
34 TraesCS1D01G120400 chr4D 90.583 223 20 1 1 223 446818068 446818289 7.190000e-76 294.0
35 TraesCS1D01G120400 chr4D 92.147 191 9 1 2123 2313 502388814 502388630 5.640000e-67 265.0
36 TraesCS1D01G120400 chr3D 89.954 219 21 1 5 223 503186606 503186823 5.600000e-72 281.0
37 TraesCS1D01G120400 chr3D 88.789 223 22 3 1 223 131530914 131531133 1.210000e-68 270.0
38 TraesCS1D01G120400 chr2A 89.286 224 23 1 1 224 88327517 88327295 2.010000e-71 279.0
39 TraesCS1D01G120400 chr1B 87.946 224 26 1 1 224 69831810 69831588 2.030000e-66 263.0
40 TraesCS1D01G120400 chr3A 87.931 58 6 1 2595 2651 576197468 576197525 1.710000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G120400 chr1D 118926243 118928898 2655 True 4905.0 4905 100.0000 1 2656 1 chr1D.!!$R1 2655
1 TraesCS1D01G120400 chr6D 102986152 102988193 2041 True 2494.0 2494 88.8510 305 2349 1 chr6D.!!$R1 2044
2 TraesCS1D01G120400 chr5B 222412112 222414377 2265 True 1447.5 2093 89.9920 305 2531 2 chr5B.!!$R1 2226
3 TraesCS1D01G120400 chr2D 42734371 42737443 3072 False 1418.0 2091 89.6660 302 2531 2 chr2D.!!$F1 2229
4 TraesCS1D01G120400 chr5D 134148505 134150210 1705 False 1550.0 1550 83.8690 903 2531 1 chr5D.!!$F1 1628
5 TraesCS1D01G120400 chr4A 658125266 658126534 1268 True 1480.0 1480 87.9720 302 1553 1 chr4A.!!$R1 1251
6 TraesCS1D01G120400 chr7A 669947 671167 1220 False 1251.0 1251 85.5190 1032 2245 1 chr7A.!!$F1 1213
7 TraesCS1D01G120400 chr3B 713348167 713349242 1075 False 1245.0 1245 87.5230 302 1389 1 chr3B.!!$F1 1087
8 TraesCS1D01G120400 chr5A 31899778 31900785 1007 False 904.0 904 83.7570 1280 2245 1 chr5A.!!$F1 965
9 TraesCS1D01G120400 chr5A 31601417 31602747 1330 False 589.5 909 85.0455 1280 2531 2 chr5A.!!$F2 1251
10 TraesCS1D01G120400 chr5A 31632403 31633734 1331 False 589.5 909 85.0455 1280 2531 2 chr5A.!!$F3 1251
11 TraesCS1D01G120400 chr5A 31666420 31667750 1330 False 589.5 909 85.0455 1280 2531 2 chr5A.!!$F4 1251
12 TraesCS1D01G120400 chr5A 31719606 31720936 1330 False 587.0 904 84.9885 1280 2531 2 chr5A.!!$F5 1251
13 TraesCS1D01G120400 chr5A 31750385 31751715 1330 False 587.0 904 84.9885 1280 2531 2 chr5A.!!$F6 1251
14 TraesCS1D01G120400 chrUn 444511831 444512579 748 False 761.0 761 85.4710 1280 2021 1 chrUn.!!$F2 741
15 TraesCS1D01G120400 chrUn 278959804 278961134 1330 False 587.0 904 84.9965 1280 2531 2 chrUn.!!$F3 1251
16 TraesCS1D01G120400 chr2B 142391414 142392117 703 True 440.0 440 78.4930 1600 2313 1 chr2B.!!$R1 713

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
947 969 0.103208 ATCCTCGTCCGTTGATGCTC 59.897 55.0 0.0 0.0 0.0 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2619 3663 0.099259 CCATTTGCGTCGATGCATGT 59.901 50.0 31.37 20.09 45.78 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.950210 ACTTAGCTAGTAACATAACGTAACTCA 58.050 33.333 0.00 0.00 34.56 3.41
27 28 9.778993 CTTAGCTAGTAACATAACGTAACTCAA 57.221 33.333 0.00 0.00 0.00 3.02
30 31 8.919661 AGCTAGTAACATAACGTAACTCAAAAC 58.080 33.333 0.00 0.00 0.00 2.43
31 32 8.702438 GCTAGTAACATAACGTAACTCAAAACA 58.298 33.333 0.00 0.00 0.00 2.83
37 38 8.555166 ACATAACGTAACTCAAAACAAATGTG 57.445 30.769 0.00 0.00 0.00 3.21
38 39 5.942325 AACGTAACTCAAAACAAATGTGC 57.058 34.783 0.00 0.00 0.00 4.57
39 40 5.243426 ACGTAACTCAAAACAAATGTGCT 57.757 34.783 0.00 0.00 0.00 4.40
40 41 5.646606 ACGTAACTCAAAACAAATGTGCTT 58.353 33.333 0.00 0.00 0.00 3.91
41 42 6.787225 ACGTAACTCAAAACAAATGTGCTTA 58.213 32.000 0.00 0.00 0.00 3.09
42 43 7.422399 ACGTAACTCAAAACAAATGTGCTTAT 58.578 30.769 0.00 0.00 0.00 1.73
43 44 7.378461 ACGTAACTCAAAACAAATGTGCTTATG 59.622 33.333 0.00 0.00 0.00 1.90
44 45 7.378461 CGTAACTCAAAACAAATGTGCTTATGT 59.622 33.333 0.00 0.00 0.00 2.29
45 46 7.467557 AACTCAAAACAAATGTGCTTATGTG 57.532 32.000 0.00 0.00 0.00 3.21
46 47 5.984926 ACTCAAAACAAATGTGCTTATGTGG 59.015 36.000 0.00 0.00 0.00 4.17
47 48 4.749099 TCAAAACAAATGTGCTTATGTGGC 59.251 37.500 0.00 0.00 0.00 5.01
48 49 4.333913 AAACAAATGTGCTTATGTGGCA 57.666 36.364 0.00 0.00 37.36 4.92
49 50 4.333913 AACAAATGTGCTTATGTGGCAA 57.666 36.364 0.00 0.00 41.54 4.52
50 51 4.333913 ACAAATGTGCTTATGTGGCAAA 57.666 36.364 0.00 0.00 41.54 3.68
51 52 4.309099 ACAAATGTGCTTATGTGGCAAAG 58.691 39.130 0.00 0.00 41.54 2.77
52 53 2.660189 ATGTGCTTATGTGGCAAAGC 57.340 45.000 14.02 14.02 46.60 3.51
55 56 3.792716 GCTTATGTGGCAAAGCGTT 57.207 47.368 6.64 0.00 38.80 4.84
56 57 2.911819 GCTTATGTGGCAAAGCGTTA 57.088 45.000 6.64 0.00 38.80 3.18
57 58 3.210358 GCTTATGTGGCAAAGCGTTAA 57.790 42.857 6.64 0.00 38.80 2.01
58 59 3.769536 GCTTATGTGGCAAAGCGTTAAT 58.230 40.909 6.64 0.00 38.80 1.40
59 60 4.915704 GCTTATGTGGCAAAGCGTTAATA 58.084 39.130 6.64 0.00 38.80 0.98
60 61 5.336744 GCTTATGTGGCAAAGCGTTAATAA 58.663 37.500 6.64 0.00 38.80 1.40
61 62 5.802956 GCTTATGTGGCAAAGCGTTAATAAA 59.197 36.000 6.64 0.00 38.80 1.40
62 63 6.020678 GCTTATGTGGCAAAGCGTTAATAAAG 60.021 38.462 6.64 0.00 38.80 1.85
63 64 5.637006 ATGTGGCAAAGCGTTAATAAAGA 57.363 34.783 0.00 0.00 0.00 2.52
64 65 5.440234 TGTGGCAAAGCGTTAATAAAGAA 57.560 34.783 0.00 0.00 0.00 2.52
65 66 5.833082 TGTGGCAAAGCGTTAATAAAGAAA 58.167 33.333 0.00 0.00 0.00 2.52
66 67 6.273825 TGTGGCAAAGCGTTAATAAAGAAAA 58.726 32.000 0.00 0.00 0.00 2.29
67 68 6.757010 TGTGGCAAAGCGTTAATAAAGAAAAA 59.243 30.769 0.00 0.00 0.00 1.94
68 69 7.043059 TGTGGCAAAGCGTTAATAAAGAAAAAG 60.043 33.333 0.00 0.00 0.00 2.27
69 70 6.422400 TGGCAAAGCGTTAATAAAGAAAAAGG 59.578 34.615 0.00 0.00 0.00 3.11
70 71 6.422701 GGCAAAGCGTTAATAAAGAAAAAGGT 59.577 34.615 0.00 0.00 0.00 3.50
71 72 7.280769 GCAAAGCGTTAATAAAGAAAAAGGTG 58.719 34.615 0.00 0.00 0.00 4.00
72 73 7.042992 GCAAAGCGTTAATAAAGAAAAAGGTGT 60.043 33.333 0.00 0.00 0.00 4.16
73 74 8.813282 CAAAGCGTTAATAAAGAAAAAGGTGTT 58.187 29.630 0.00 0.00 0.00 3.32
74 75 8.936070 AAGCGTTAATAAAGAAAAAGGTGTTT 57.064 26.923 0.00 0.00 0.00 2.83
75 76 8.347729 AGCGTTAATAAAGAAAAAGGTGTTTG 57.652 30.769 0.00 0.00 0.00 2.93
76 77 7.977293 AGCGTTAATAAAGAAAAAGGTGTTTGT 59.023 29.630 0.00 0.00 0.00 2.83
77 78 8.053653 GCGTTAATAAAGAAAAAGGTGTTTGTG 58.946 33.333 0.00 0.00 0.00 3.33
78 79 8.536407 CGTTAATAAAGAAAAAGGTGTTTGTGG 58.464 33.333 0.00 0.00 0.00 4.17
79 80 9.373603 GTTAATAAAGAAAAAGGTGTTTGTGGT 57.626 29.630 0.00 0.00 0.00 4.16
80 81 7.841915 AATAAAGAAAAAGGTGTTTGTGGTG 57.158 32.000 0.00 0.00 0.00 4.17
81 82 5.476091 AAAGAAAAAGGTGTTTGTGGTGA 57.524 34.783 0.00 0.00 0.00 4.02
82 83 4.450082 AGAAAAAGGTGTTTGTGGTGAC 57.550 40.909 0.00 0.00 0.00 3.67
83 84 3.829601 AGAAAAAGGTGTTTGTGGTGACA 59.170 39.130 0.00 0.00 38.70 3.58
84 85 4.466015 AGAAAAAGGTGTTTGTGGTGACAT 59.534 37.500 0.00 0.00 46.14 3.06
85 86 5.654650 AGAAAAAGGTGTTTGTGGTGACATA 59.345 36.000 0.00 0.00 46.14 2.29
86 87 5.923733 AAAAGGTGTTTGTGGTGACATAA 57.076 34.783 0.00 0.00 46.14 1.90
87 88 6.478512 AAAAGGTGTTTGTGGTGACATAAT 57.521 33.333 0.00 0.00 46.14 1.28
88 89 7.589958 AAAAGGTGTTTGTGGTGACATAATA 57.410 32.000 0.00 0.00 46.14 0.98
89 90 7.775053 AAAGGTGTTTGTGGTGACATAATAT 57.225 32.000 0.00 0.00 46.14 1.28
90 91 6.757897 AGGTGTTTGTGGTGACATAATATG 57.242 37.500 0.00 0.00 46.14 1.78
92 93 6.719370 AGGTGTTTGTGGTGACATAATATGTT 59.281 34.615 7.39 0.00 45.03 2.71
93 94 7.885922 AGGTGTTTGTGGTGACATAATATGTTA 59.114 33.333 7.39 0.17 45.03 2.41
94 95 7.966204 GGTGTTTGTGGTGACATAATATGTTAC 59.034 37.037 16.91 16.91 45.03 2.50
95 96 8.726988 GTGTTTGTGGTGACATAATATGTTACT 58.273 33.333 22.04 0.00 45.74 2.24
96 97 8.726068 TGTTTGTGGTGACATAATATGTTACTG 58.274 33.333 22.04 0.00 45.74 2.74
97 98 8.726988 GTTTGTGGTGACATAATATGTTACTGT 58.273 33.333 22.04 0.00 45.74 3.55
98 99 9.945904 TTTGTGGTGACATAATATGTTACTGTA 57.054 29.630 22.04 10.55 45.74 2.74
99 100 9.945904 TTGTGGTGACATAATATGTTACTGTAA 57.054 29.630 22.04 13.91 45.74 2.41
100 101 9.373603 TGTGGTGACATAATATGTTACTGTAAC 57.626 33.333 22.04 20.87 45.74 2.50
113 114 6.818233 TGTTACTGTAACATAACACACCTCA 58.182 36.000 25.14 2.58 43.23 3.86
114 115 7.273712 TGTTACTGTAACATAACACACCTCAA 58.726 34.615 25.14 2.12 43.23 3.02
115 116 7.934665 TGTTACTGTAACATAACACACCTCAAT 59.065 33.333 25.14 0.00 43.23 2.57
116 117 6.801539 ACTGTAACATAACACACCTCAATG 57.198 37.500 0.00 0.00 0.00 2.82
117 118 5.181245 ACTGTAACATAACACACCTCAATGC 59.819 40.000 0.00 0.00 0.00 3.56
118 119 5.066593 TGTAACATAACACACCTCAATGCA 58.933 37.500 0.00 0.00 0.00 3.96
119 120 5.532779 TGTAACATAACACACCTCAATGCAA 59.467 36.000 0.00 0.00 0.00 4.08
120 121 5.528043 AACATAACACACCTCAATGCAAA 57.472 34.783 0.00 0.00 0.00 3.68
121 122 5.528043 ACATAACACACCTCAATGCAAAA 57.472 34.783 0.00 0.00 0.00 2.44
122 123 6.100404 ACATAACACACCTCAATGCAAAAT 57.900 33.333 0.00 0.00 0.00 1.82
123 124 5.927689 ACATAACACACCTCAATGCAAAATG 59.072 36.000 0.00 0.00 0.00 2.32
124 125 4.405116 AACACACCTCAATGCAAAATGT 57.595 36.364 0.00 0.00 0.00 2.71
125 126 3.719924 ACACACCTCAATGCAAAATGTG 58.280 40.909 12.51 12.51 41.31 3.21
126 127 3.132646 ACACACCTCAATGCAAAATGTGT 59.867 39.130 13.47 13.47 43.15 3.72
127 128 3.737266 CACACCTCAATGCAAAATGTGTC 59.263 43.478 8.76 0.00 33.54 3.67
128 129 3.638160 ACACCTCAATGCAAAATGTGTCT 59.362 39.130 0.00 0.00 30.19 3.41
129 130 4.826733 ACACCTCAATGCAAAATGTGTCTA 59.173 37.500 0.00 0.00 30.19 2.59
130 131 5.156355 CACCTCAATGCAAAATGTGTCTAC 58.844 41.667 0.00 0.00 0.00 2.59
131 132 4.826733 ACCTCAATGCAAAATGTGTCTACA 59.173 37.500 0.00 0.00 41.89 2.74
132 133 5.301551 ACCTCAATGCAAAATGTGTCTACAA 59.698 36.000 0.00 0.00 40.84 2.41
133 134 5.630680 CCTCAATGCAAAATGTGTCTACAAC 59.369 40.000 0.00 0.00 40.84 3.32
134 135 5.527951 TCAATGCAAAATGTGTCTACAACC 58.472 37.500 0.00 0.00 40.84 3.77
135 136 5.301551 TCAATGCAAAATGTGTCTACAACCT 59.698 36.000 0.00 0.00 40.84 3.50
136 137 6.488344 TCAATGCAAAATGTGTCTACAACCTA 59.512 34.615 0.00 0.00 40.84 3.08
137 138 6.892658 ATGCAAAATGTGTCTACAACCTAA 57.107 33.333 0.00 0.00 40.84 2.69
138 139 6.892658 TGCAAAATGTGTCTACAACCTAAT 57.107 33.333 0.00 0.00 40.84 1.73
139 140 7.987750 TGCAAAATGTGTCTACAACCTAATA 57.012 32.000 0.00 0.00 40.84 0.98
140 141 8.397575 TGCAAAATGTGTCTACAACCTAATAA 57.602 30.769 0.00 0.00 40.84 1.40
141 142 8.851145 TGCAAAATGTGTCTACAACCTAATAAA 58.149 29.630 0.00 0.00 40.84 1.40
142 143 9.855021 GCAAAATGTGTCTACAACCTAATAAAT 57.145 29.630 0.00 0.00 40.84 1.40
147 148 8.786826 TGTGTCTACAACCTAATAAATGAAGG 57.213 34.615 0.00 0.00 32.88 3.46
148 149 7.335924 TGTGTCTACAACCTAATAAATGAAGGC 59.664 37.037 0.00 0.00 32.88 4.35
149 150 7.553044 GTGTCTACAACCTAATAAATGAAGGCT 59.447 37.037 0.00 0.00 33.42 4.58
150 151 8.107095 TGTCTACAACCTAATAAATGAAGGCTT 58.893 33.333 0.00 0.00 33.42 4.35
151 152 8.398665 GTCTACAACCTAATAAATGAAGGCTTG 58.601 37.037 3.46 0.00 33.42 4.01
152 153 5.965922 ACAACCTAATAAATGAAGGCTTGC 58.034 37.500 3.46 0.00 33.42 4.01
153 154 5.480073 ACAACCTAATAAATGAAGGCTTGCA 59.520 36.000 3.46 2.93 33.42 4.08
154 155 6.155049 ACAACCTAATAAATGAAGGCTTGCAT 59.845 34.615 3.46 5.41 33.42 3.96
155 156 6.152932 ACCTAATAAATGAAGGCTTGCATG 57.847 37.500 3.46 0.00 33.42 4.06
156 157 5.893255 ACCTAATAAATGAAGGCTTGCATGA 59.107 36.000 3.46 1.38 33.42 3.07
157 158 6.183360 ACCTAATAAATGAAGGCTTGCATGAC 60.183 38.462 3.46 0.00 33.42 3.06
158 159 5.664294 AATAAATGAAGGCTTGCATGACA 57.336 34.783 3.46 0.00 0.00 3.58
159 160 3.308438 AAATGAAGGCTTGCATGACAC 57.692 42.857 3.46 2.23 0.00 3.67
160 161 2.211250 ATGAAGGCTTGCATGACACT 57.789 45.000 3.46 0.00 0.00 3.55
161 162 2.857186 TGAAGGCTTGCATGACACTA 57.143 45.000 3.46 0.00 0.00 2.74
162 163 3.138884 TGAAGGCTTGCATGACACTAA 57.861 42.857 3.46 0.00 0.00 2.24
163 164 3.485394 TGAAGGCTTGCATGACACTAAA 58.515 40.909 3.46 0.00 0.00 1.85
164 165 4.081406 TGAAGGCTTGCATGACACTAAAT 58.919 39.130 3.46 0.00 0.00 1.40
165 166 4.523943 TGAAGGCTTGCATGACACTAAATT 59.476 37.500 3.46 0.00 0.00 1.82
166 167 5.010922 TGAAGGCTTGCATGACACTAAATTT 59.989 36.000 3.46 0.00 0.00 1.82
167 168 6.208402 TGAAGGCTTGCATGACACTAAATTTA 59.792 34.615 3.46 0.00 0.00 1.40
168 169 6.780457 AGGCTTGCATGACACTAAATTTAT 57.220 33.333 8.34 0.00 0.00 1.40
169 170 6.567050 AGGCTTGCATGACACTAAATTTATG 58.433 36.000 8.34 2.81 0.00 1.90
170 171 6.153340 AGGCTTGCATGACACTAAATTTATGT 59.847 34.615 8.34 10.93 0.00 2.29
171 172 6.813152 GGCTTGCATGACACTAAATTTATGTT 59.187 34.615 3.33 0.00 0.00 2.71
172 173 7.973388 GGCTTGCATGACACTAAATTTATGTTA 59.027 33.333 3.33 9.55 0.00 2.41
173 174 8.798153 GCTTGCATGACACTAAATTTATGTTAC 58.202 33.333 3.33 4.75 0.00 2.50
177 178 9.931210 GCATGACACTAAATTTATGTTACTACC 57.069 33.333 0.00 3.34 0.00 3.18
180 181 9.439500 TGACACTAAATTTATGTTACTACCCAC 57.561 33.333 11.86 1.95 0.00 4.61
181 182 9.662947 GACACTAAATTTATGTTACTACCCACT 57.337 33.333 11.86 0.00 0.00 4.00
189 190 9.793259 ATTTATGTTACTACCCACTATGAATGG 57.207 33.333 0.00 0.00 36.94 3.16
190 191 6.824958 ATGTTACTACCCACTATGAATGGT 57.175 37.500 0.00 0.00 35.23 3.55
191 192 7.924358 ATGTTACTACCCACTATGAATGGTA 57.076 36.000 0.00 0.00 35.23 3.25
197 198 7.356089 CTACCCACTATGAATGGTAGTAACA 57.644 40.000 6.43 0.00 43.43 2.41
198 199 6.824958 ACCCACTATGAATGGTAGTAACAT 57.175 37.500 0.00 0.00 35.23 2.71
199 200 7.924358 ACCCACTATGAATGGTAGTAACATA 57.076 36.000 0.00 0.00 35.23 2.29
200 201 7.963532 ACCCACTATGAATGGTAGTAACATAG 58.036 38.462 0.00 0.00 43.11 2.23
201 202 7.787904 ACCCACTATGAATGGTAGTAACATAGA 59.212 37.037 15.96 0.00 41.29 1.98
202 203 8.088981 CCCACTATGAATGGTAGTAACATAGAC 58.911 40.741 15.96 0.00 41.29 2.59
203 204 8.861086 CCACTATGAATGGTAGTAACATAGACT 58.139 37.037 15.96 0.00 41.29 3.24
230 231 9.338622 AGTAAAATATACATGTTACTTCCCAGC 57.661 33.333 2.30 0.00 40.78 4.85
231 232 9.338622 GTAAAATATACATGTTACTTCCCAGCT 57.661 33.333 2.30 0.00 33.60 4.24
233 234 9.561069 AAAATATACATGTTACTTCCCAGCTAG 57.439 33.333 2.30 0.00 0.00 3.42
234 235 3.268023 ACATGTTACTTCCCAGCTAGC 57.732 47.619 6.62 6.62 0.00 3.42
235 236 2.092914 ACATGTTACTTCCCAGCTAGCC 60.093 50.000 12.13 0.00 0.00 3.93
236 237 1.952621 TGTTACTTCCCAGCTAGCCT 58.047 50.000 12.13 0.00 0.00 4.58
237 238 1.831736 TGTTACTTCCCAGCTAGCCTC 59.168 52.381 12.13 0.00 0.00 4.70
238 239 1.831736 GTTACTTCCCAGCTAGCCTCA 59.168 52.381 12.13 0.00 0.00 3.86
239 240 1.486211 TACTTCCCAGCTAGCCTCAC 58.514 55.000 12.13 0.00 0.00 3.51
240 241 1.142748 CTTCCCAGCTAGCCTCACG 59.857 63.158 12.13 0.00 0.00 4.35
241 242 2.914777 CTTCCCAGCTAGCCTCACGC 62.915 65.000 12.13 0.00 37.98 5.34
242 243 4.537433 CCCAGCTAGCCTCACGCC 62.537 72.222 12.13 0.00 38.78 5.68
243 244 4.537433 CCAGCTAGCCTCACGCCC 62.537 72.222 12.13 0.00 38.78 6.13
244 245 3.774528 CAGCTAGCCTCACGCCCA 61.775 66.667 12.13 0.00 38.78 5.36
245 246 3.775654 AGCTAGCCTCACGCCCAC 61.776 66.667 12.13 0.00 38.78 4.61
246 247 4.082523 GCTAGCCTCACGCCCACA 62.083 66.667 2.29 0.00 38.78 4.17
247 248 2.903357 CTAGCCTCACGCCCACAT 59.097 61.111 0.00 0.00 38.78 3.21
248 249 1.221840 CTAGCCTCACGCCCACATT 59.778 57.895 0.00 0.00 38.78 2.71
249 250 0.392998 CTAGCCTCACGCCCACATTT 60.393 55.000 0.00 0.00 38.78 2.32
250 251 0.392461 TAGCCTCACGCCCACATTTC 60.392 55.000 0.00 0.00 38.78 2.17
251 252 3.039202 GCCTCACGCCCACATTTCG 62.039 63.158 0.00 0.00 0.00 3.46
252 253 1.375396 CCTCACGCCCACATTTCGA 60.375 57.895 0.00 0.00 0.00 3.71
253 254 1.635663 CCTCACGCCCACATTTCGAC 61.636 60.000 0.00 0.00 0.00 4.20
254 255 0.670546 CTCACGCCCACATTTCGACT 60.671 55.000 0.00 0.00 0.00 4.18
255 256 0.948623 TCACGCCCACATTTCGACTG 60.949 55.000 0.00 0.00 0.00 3.51
256 257 1.671054 ACGCCCACATTTCGACTGG 60.671 57.895 0.00 0.00 0.00 4.00
257 258 2.877691 GCCCACATTTCGACTGGC 59.122 61.111 0.00 0.00 0.00 4.85
258 259 2.700773 GCCCACATTTCGACTGGCC 61.701 63.158 0.00 0.00 32.74 5.36
259 260 2.398554 CCCACATTTCGACTGGCCG 61.399 63.158 0.00 0.00 0.00 6.13
260 261 1.671054 CCACATTTCGACTGGCCGT 60.671 57.895 0.00 0.00 0.00 5.68
261 262 0.390603 CCACATTTCGACTGGCCGTA 60.391 55.000 0.00 0.00 0.00 4.02
262 263 0.999406 CACATTTCGACTGGCCGTAG 59.001 55.000 0.00 0.00 0.00 3.51
277 278 1.535833 CGTAGGAGGGCGATATGTCT 58.464 55.000 0.00 0.00 0.00 3.41
278 279 1.200252 CGTAGGAGGGCGATATGTCTG 59.800 57.143 0.00 0.00 0.00 3.51
279 280 1.546476 GTAGGAGGGCGATATGTCTGG 59.454 57.143 0.00 0.00 0.00 3.86
280 281 1.004440 GGAGGGCGATATGTCTGGC 60.004 63.158 0.00 0.83 0.00 4.85
281 282 1.004440 GAGGGCGATATGTCTGGCC 60.004 63.158 15.14 15.14 44.82 5.36
282 283 2.357517 GGGCGATATGTCTGGCCG 60.358 66.667 0.00 0.00 46.50 6.13
283 284 2.421739 GGCGATATGTCTGGCCGT 59.578 61.111 0.00 0.00 35.59 5.68
284 285 1.956170 GGCGATATGTCTGGCCGTG 60.956 63.158 0.00 0.00 35.59 4.94
285 286 1.227263 GCGATATGTCTGGCCGTGT 60.227 57.895 0.00 0.00 0.00 4.49
286 287 0.810031 GCGATATGTCTGGCCGTGTT 60.810 55.000 0.00 0.00 0.00 3.32
287 288 1.537348 GCGATATGTCTGGCCGTGTTA 60.537 52.381 0.00 0.00 0.00 2.41
288 289 2.866460 GCGATATGTCTGGCCGTGTTAT 60.866 50.000 0.00 0.00 0.00 1.89
289 290 3.390135 CGATATGTCTGGCCGTGTTATT 58.610 45.455 0.00 0.00 0.00 1.40
290 291 3.807622 CGATATGTCTGGCCGTGTTATTT 59.192 43.478 0.00 0.00 0.00 1.40
291 292 4.272504 CGATATGTCTGGCCGTGTTATTTT 59.727 41.667 0.00 0.00 0.00 1.82
292 293 5.464057 CGATATGTCTGGCCGTGTTATTTTA 59.536 40.000 0.00 0.00 0.00 1.52
293 294 6.147164 CGATATGTCTGGCCGTGTTATTTTAT 59.853 38.462 0.00 0.00 0.00 1.40
294 295 7.307751 CGATATGTCTGGCCGTGTTATTTTATT 60.308 37.037 0.00 0.00 0.00 1.40
295 296 5.303747 TGTCTGGCCGTGTTATTTTATTG 57.696 39.130 0.00 0.00 0.00 1.90
296 297 4.156922 TGTCTGGCCGTGTTATTTTATTGG 59.843 41.667 0.00 0.00 0.00 3.16
297 298 3.697045 TCTGGCCGTGTTATTTTATTGGG 59.303 43.478 0.00 0.00 0.00 4.12
298 299 2.761208 TGGCCGTGTTATTTTATTGGGG 59.239 45.455 0.00 0.00 0.00 4.96
299 300 2.482316 GGCCGTGTTATTTTATTGGGGC 60.482 50.000 0.00 0.00 37.31 5.80
300 301 2.166664 GCCGTGTTATTTTATTGGGGCA 59.833 45.455 0.00 0.00 37.93 5.36
313 314 0.844661 TGGGGCACAGTCCAATACCT 60.845 55.000 0.00 0.00 0.00 3.08
326 327 5.183904 AGTCCAATACCTTTGATTCAACTGC 59.816 40.000 0.00 0.00 0.00 4.40
420 421 2.182537 CGGACGTAAACCTCCCCG 59.817 66.667 0.00 0.00 0.00 5.73
436 437 1.066645 CCCCGTAATATCGCCCCTAAC 60.067 57.143 0.00 0.00 0.00 2.34
463 464 0.745845 GATTCCAGTCGCAGCCACAT 60.746 55.000 0.00 0.00 0.00 3.21
495 507 3.610669 CCTCCTCGCCCAGATCCG 61.611 72.222 0.00 0.00 0.00 4.18
503 515 2.439104 GCCCAGATCCGCTTCTCCT 61.439 63.158 0.00 0.00 0.00 3.69
519 531 1.072678 CCTCGAGCATCATGGCCAT 59.927 57.895 14.09 14.09 33.17 4.40
603 616 1.581447 GCAAAACCCTGGAAGAGCG 59.419 57.895 0.00 0.00 34.07 5.03
631 644 4.379243 CTTGGCGCCTCGTCCACT 62.379 66.667 29.70 0.00 34.19 4.00
686 699 1.692749 GACCCATCCTGCCTACCCA 60.693 63.158 0.00 0.00 0.00 4.51
724 737 1.752498 ACATGGCGGAGATACGTACAA 59.248 47.619 0.00 0.00 35.98 2.41
738 757 1.058695 CGTACAATCGACTTTGCCGAC 59.941 52.381 0.00 0.00 38.97 4.79
748 767 1.891060 CTTTGCCGACGTCTGCACTC 61.891 60.000 30.64 4.88 35.85 3.51
782 801 2.743928 CTGCCGGTGCTTGGTCTC 60.744 66.667 1.90 0.00 38.71 3.36
806 825 4.083537 ACGTTGTAATGAATTCGTGCATGT 60.084 37.500 5.68 3.73 0.00 3.21
826 846 6.090898 GCATGTAAGGGTGCTTCTAATATACG 59.909 42.308 0.00 0.00 38.30 3.06
835 855 7.255590 GGGTGCTTCTAATATACGGTACAACTA 60.256 40.741 0.00 0.00 0.00 2.24
837 857 9.125906 GTGCTTCTAATATACGGTACAACTATG 57.874 37.037 0.00 0.00 0.00 2.23
947 969 0.103208 ATCCTCGTCCGTTGATGCTC 59.897 55.000 0.00 0.00 0.00 4.26
968 998 1.860078 GCGGCTACAACACACACTC 59.140 57.895 0.00 0.00 0.00 3.51
981 1011 1.534235 ACACTCTGCCTCCCTCGTT 60.534 57.895 0.00 0.00 0.00 3.85
1136 1179 1.697432 TGTCGTCATCCCTTCCTGTTT 59.303 47.619 0.00 0.00 0.00 2.83
1157 1200 4.383774 TTTCTGTCGCGTTCTATTTGTG 57.616 40.909 5.77 0.00 0.00 3.33
1164 1207 4.327898 GTCGCGTTCTATTTGTGGTGATTA 59.672 41.667 5.77 0.00 0.00 1.75
1176 1219 3.761218 TGTGGTGATTATTTCCGTGCAAT 59.239 39.130 0.00 0.00 0.00 3.56
1179 1222 3.490761 GGTGATTATTTCCGTGCAATGGG 60.491 47.826 6.41 0.03 45.49 4.00
1197 1240 6.444633 CAATGGGAAATAGTTCATCAGCATC 58.555 40.000 5.15 0.00 35.25 3.91
1257 1302 5.181009 TCACATGATCAAGTGCTTCCTAAG 58.819 41.667 23.03 0.28 35.76 2.18
1367 1415 8.299570 CACTACAATGTGCTCCTTATTTTCTTT 58.700 33.333 0.00 0.00 0.00 2.52
1455 1505 6.389830 AGTTTGTTGCACAATGTCATAAGA 57.610 33.333 0.00 0.00 38.00 2.10
1457 1507 6.697019 AGTTTGTTGCACAATGTCATAAGAAC 59.303 34.615 0.00 0.00 38.00 3.01
1461 1511 3.758023 TGCACAATGTCATAAGAACCAGG 59.242 43.478 0.00 0.00 0.00 4.45
1465 1515 3.933861 ATGTCATAAGAACCAGGGGAC 57.066 47.619 0.00 0.00 0.00 4.46
1476 1526 4.772118 AGGGGACTGGTGACCTTT 57.228 55.556 2.11 0.00 41.13 3.11
1506 1556 2.899339 GCTTCTCTGCGGCCATCC 60.899 66.667 2.24 0.00 0.00 3.51
1531 1581 1.135139 CCAGTGTGTAGATGGAGACGG 59.865 57.143 0.00 0.00 36.09 4.79
1581 1631 4.057428 GCACTGGCGAGGACGTCT 62.057 66.667 16.46 0.90 44.93 4.18
1586 1636 3.885521 GGCGAGGACGTCTACCGG 61.886 72.222 16.46 0.00 41.20 5.28
1997 2942 7.262048 TCTCTAAAACACAAAAATGGAACCAC 58.738 34.615 0.00 0.00 0.00 4.16
2005 2950 6.487331 ACACAAAAATGGAACCACGTCTAATA 59.513 34.615 0.00 0.00 0.00 0.98
2103 3069 6.811253 AATTTTGTACGAAGCAACTGGATA 57.189 33.333 0.00 0.00 0.00 2.59
2110 3076 3.119291 CGAAGCAACTGGATAGCTAGTG 58.881 50.000 0.00 0.00 37.70 2.74
2199 3192 8.068380 CGATGTACTACAGATTATGAAGAACGA 58.932 37.037 0.00 0.00 0.00 3.85
2248 3243 9.037737 TCCGTATAACAGAAATAAACATACAGC 57.962 33.333 0.00 0.00 0.00 4.40
2320 3363 3.708121 GAGGGAAATCAATGGGAAGCATT 59.292 43.478 0.00 0.00 0.00 3.56
2351 3394 8.902540 ACGATAATTGTTTAGATATGGAAGCA 57.097 30.769 0.00 0.00 0.00 3.91
2446 3490 2.556559 GGATGGAAACTACCAAAGCCCA 60.557 50.000 0.00 0.00 43.47 5.36
2470 3514 1.125711 ACTACCAAAGGCCCACGTCT 61.126 55.000 0.00 0.00 0.00 4.18
2476 3520 1.139058 CAAAGGCCCACGTCTAGCTAT 59.861 52.381 0.00 0.00 0.00 2.97
2501 3545 6.945435 TCCTATTAGATCAGACACTCAGATCC 59.055 42.308 0.00 0.00 39.38 3.36
2518 3562 2.512974 CACCCCAATCGTACGGCC 60.513 66.667 16.52 0.00 0.00 6.13
2531 3575 0.745845 TACGGCCGTGGACTAGTCTC 60.746 60.000 40.02 12.69 0.00 3.36
2532 3576 1.749638 CGGCCGTGGACTAGTCTCT 60.750 63.158 19.50 0.00 0.00 3.10
2533 3577 1.810532 GGCCGTGGACTAGTCTCTG 59.189 63.158 21.88 11.42 0.00 3.35
2534 3578 0.680280 GGCCGTGGACTAGTCTCTGA 60.680 60.000 21.88 1.98 0.00 3.27
2535 3579 1.394618 GCCGTGGACTAGTCTCTGAT 58.605 55.000 21.88 0.00 0.00 2.90
2536 3580 1.335496 GCCGTGGACTAGTCTCTGATC 59.665 57.143 21.88 5.31 0.00 2.92
2537 3581 1.950909 CCGTGGACTAGTCTCTGATCC 59.049 57.143 21.88 5.24 0.00 3.36
2538 3582 1.950909 CGTGGACTAGTCTCTGATCCC 59.049 57.143 21.88 4.49 0.00 3.85
2539 3583 2.422235 CGTGGACTAGTCTCTGATCCCT 60.422 54.545 21.88 0.00 0.00 4.20
2540 3584 3.181453 CGTGGACTAGTCTCTGATCCCTA 60.181 52.174 21.88 0.00 0.00 3.53
2541 3585 4.394729 GTGGACTAGTCTCTGATCCCTAG 58.605 52.174 21.88 0.00 34.44 3.02
2542 3586 4.048600 TGGACTAGTCTCTGATCCCTAGT 58.951 47.826 21.88 9.46 42.01 2.57
2543 3587 4.141367 TGGACTAGTCTCTGATCCCTAGTG 60.141 50.000 21.88 0.00 40.02 2.74
2544 3588 4.394729 GACTAGTCTCTGATCCCTAGTGG 58.605 52.174 15.91 0.00 40.02 4.00
2545 3589 3.789274 ACTAGTCTCTGATCCCTAGTGGT 59.211 47.826 9.08 0.00 38.85 4.16
2546 3590 3.767309 AGTCTCTGATCCCTAGTGGTT 57.233 47.619 0.00 0.00 34.77 3.67
2547 3591 3.637769 AGTCTCTGATCCCTAGTGGTTC 58.362 50.000 0.00 0.00 33.99 3.62
2548 3592 2.696187 GTCTCTGATCCCTAGTGGTTCC 59.304 54.545 0.00 0.00 32.62 3.62
2549 3593 2.043227 CTCTGATCCCTAGTGGTTCCC 58.957 57.143 0.00 0.00 32.62 3.97
2550 3594 1.364678 TCTGATCCCTAGTGGTTCCCA 59.635 52.381 0.00 0.00 32.62 4.37
2551 3595 2.196595 CTGATCCCTAGTGGTTCCCAA 58.803 52.381 0.00 0.00 34.18 4.12
2552 3596 2.780010 CTGATCCCTAGTGGTTCCCAAT 59.220 50.000 0.00 0.00 34.18 3.16
2553 3597 3.973973 CTGATCCCTAGTGGTTCCCAATA 59.026 47.826 0.00 0.00 34.18 1.90
2554 3598 4.577096 TGATCCCTAGTGGTTCCCAATAT 58.423 43.478 0.00 0.00 33.54 1.28
2555 3599 4.981647 TGATCCCTAGTGGTTCCCAATATT 59.018 41.667 0.00 0.00 33.54 1.28
2556 3600 6.154645 TGATCCCTAGTGGTTCCCAATATTA 58.845 40.000 0.00 0.00 33.54 0.98
2557 3601 5.899631 TCCCTAGTGGTTCCCAATATTAC 57.100 43.478 0.00 0.00 33.54 1.89
2558 3602 4.661709 TCCCTAGTGGTTCCCAATATTACC 59.338 45.833 0.00 0.00 33.54 2.85
2559 3603 4.414182 CCCTAGTGGTTCCCAATATTACCA 59.586 45.833 4.05 4.05 33.54 3.25
2560 3604 5.074515 CCCTAGTGGTTCCCAATATTACCAT 59.925 44.000 10.32 4.16 42.21 3.55
2561 3605 6.411554 CCCTAGTGGTTCCCAATATTACCATT 60.412 42.308 10.32 9.04 42.21 3.16
2562 3606 7.202242 CCCTAGTGGTTCCCAATATTACCATTA 60.202 40.741 10.32 9.59 42.21 1.90
2563 3607 8.221944 CCTAGTGGTTCCCAATATTACCATTAA 58.778 37.037 10.32 0.95 42.21 1.40
2564 3608 7.891498 AGTGGTTCCCAATATTACCATTAAC 57.109 36.000 10.32 0.00 42.21 2.01
2565 3609 7.648770 AGTGGTTCCCAATATTACCATTAACT 58.351 34.615 10.32 1.92 42.21 2.24
2566 3610 8.783903 AGTGGTTCCCAATATTACCATTAACTA 58.216 33.333 10.32 0.00 42.21 2.24
2567 3611 8.843262 GTGGTTCCCAATATTACCATTAACTAC 58.157 37.037 10.32 4.42 42.21 2.73
2568 3612 8.000127 TGGTTCCCAATATTACCATTAACTACC 59.000 37.037 4.05 0.00 35.82 3.18
2569 3613 7.173735 GGTTCCCAATATTACCATTAACTACCG 59.826 40.741 0.97 0.00 0.00 4.02
2570 3614 6.232692 TCCCAATATTACCATTAACTACCGC 58.767 40.000 0.00 0.00 0.00 5.68
2571 3615 5.121142 CCCAATATTACCATTAACTACCGCG 59.879 44.000 0.00 0.00 0.00 6.46
2572 3616 5.697633 CCAATATTACCATTAACTACCGCGT 59.302 40.000 4.92 0.00 0.00 6.01
2573 3617 6.128742 CCAATATTACCATTAACTACCGCGTC 60.129 42.308 4.92 0.00 0.00 5.19
2574 3618 4.660789 ATTACCATTAACTACCGCGTCT 57.339 40.909 4.92 0.00 0.00 4.18
2575 3619 2.573941 ACCATTAACTACCGCGTCTC 57.426 50.000 4.92 0.00 0.00 3.36
2576 3620 1.820519 ACCATTAACTACCGCGTCTCA 59.179 47.619 4.92 0.00 0.00 3.27
2577 3621 2.159282 ACCATTAACTACCGCGTCTCAG 60.159 50.000 4.92 0.00 0.00 3.35
2578 3622 2.159282 CCATTAACTACCGCGTCTCAGT 60.159 50.000 4.92 0.00 0.00 3.41
2579 3623 2.907910 TTAACTACCGCGTCTCAGTC 57.092 50.000 4.92 0.00 0.00 3.51
2580 3624 1.812235 TAACTACCGCGTCTCAGTCA 58.188 50.000 4.92 0.00 0.00 3.41
2581 3625 0.522180 AACTACCGCGTCTCAGTCAG 59.478 55.000 4.92 0.00 0.00 3.51
2582 3626 1.306642 ACTACCGCGTCTCAGTCAGG 61.307 60.000 4.92 0.00 0.00 3.86
2583 3627 2.600122 CTACCGCGTCTCAGTCAGGC 62.600 65.000 4.92 0.00 0.00 4.85
2587 3631 2.645567 CGTCTCAGTCAGGCGTGT 59.354 61.111 6.26 0.00 45.76 4.49
2588 3632 1.730902 CGTCTCAGTCAGGCGTGTG 60.731 63.158 6.26 0.00 45.76 3.82
2589 3633 1.373497 GTCTCAGTCAGGCGTGTGG 60.373 63.158 6.26 0.00 0.00 4.17
2590 3634 1.530655 TCTCAGTCAGGCGTGTGGA 60.531 57.895 6.26 2.26 0.00 4.02
2591 3635 1.080230 CTCAGTCAGGCGTGTGGAG 60.080 63.158 6.26 8.05 0.00 3.86
2592 3636 2.740055 CAGTCAGGCGTGTGGAGC 60.740 66.667 6.26 0.00 0.00 4.70
2600 3644 2.360350 CGTGTGGAGCCTGGCATT 60.360 61.111 22.65 0.00 0.00 3.56
2601 3645 2.401766 CGTGTGGAGCCTGGCATTC 61.402 63.158 22.65 10.54 0.00 2.67
2602 3646 2.048603 GTGTGGAGCCTGGCATTCC 61.049 63.158 22.65 19.83 0.00 3.01
2603 3647 2.440980 GTGGAGCCTGGCATTCCC 60.441 66.667 22.65 15.76 0.00 3.97
2604 3648 2.614969 TGGAGCCTGGCATTCCCT 60.615 61.111 22.65 0.00 0.00 4.20
2605 3649 1.307778 TGGAGCCTGGCATTCCCTA 60.308 57.895 22.65 2.15 0.00 3.53
2606 3650 0.918799 TGGAGCCTGGCATTCCCTAA 60.919 55.000 22.65 1.40 0.00 2.69
2607 3651 0.258774 GGAGCCTGGCATTCCCTAAA 59.741 55.000 22.65 0.00 0.00 1.85
2608 3652 1.393603 GAGCCTGGCATTCCCTAAAC 58.606 55.000 22.65 0.00 0.00 2.01
2609 3653 0.394352 AGCCTGGCATTCCCTAAACG 60.394 55.000 22.65 0.00 0.00 3.60
2610 3654 1.384222 GCCTGGCATTCCCTAAACGG 61.384 60.000 15.17 0.00 0.00 4.44
2611 3655 1.384222 CCTGGCATTCCCTAAACGGC 61.384 60.000 0.00 0.00 0.00 5.68
2612 3656 1.714899 CTGGCATTCCCTAAACGGCG 61.715 60.000 4.80 4.80 0.00 6.46
2613 3657 2.407616 GCATTCCCTAAACGGCGC 59.592 61.111 6.90 0.00 0.00 6.53
2614 3658 3.107447 CATTCCCTAAACGGCGCC 58.893 61.111 19.07 19.07 0.00 6.53
2615 3659 2.124445 ATTCCCTAAACGGCGCCC 60.124 61.111 23.46 2.84 0.00 6.13
2626 3670 3.209097 GGCGCCCGTTACATGCAT 61.209 61.111 18.11 0.00 0.00 3.96
2627 3671 2.327940 GCGCCCGTTACATGCATC 59.672 61.111 0.00 0.00 0.00 3.91
2628 3672 2.625906 CGCCCGTTACATGCATCG 59.374 61.111 0.00 0.00 0.00 3.84
2629 3673 1.880796 CGCCCGTTACATGCATCGA 60.881 57.895 7.05 0.00 0.00 3.59
2630 3674 1.641677 GCCCGTTACATGCATCGAC 59.358 57.895 7.05 1.00 0.00 4.20
2631 3675 1.924335 CCCGTTACATGCATCGACG 59.076 57.895 15.39 15.39 0.00 5.12
2632 3676 1.272715 CCGTTACATGCATCGACGC 59.727 57.895 16.41 0.00 32.78 5.19
2634 3678 0.368567 CGTTACATGCATCGACGCAA 59.631 50.000 11.37 0.00 46.87 4.85
2635 3679 1.201866 CGTTACATGCATCGACGCAAA 60.202 47.619 11.37 0.00 46.87 3.68
2636 3680 2.536728 CGTTACATGCATCGACGCAAAT 60.537 45.455 11.37 3.93 46.87 2.32
2637 3681 2.735643 TACATGCATCGACGCAAATG 57.264 45.000 11.37 8.01 46.87 2.32
2638 3682 0.099259 ACATGCATCGACGCAAATGG 59.901 50.000 11.37 3.16 46.87 3.16
2639 3683 0.593008 CATGCATCGACGCAAATGGG 60.593 55.000 11.37 0.00 46.87 4.00
2640 3684 2.278142 GCATCGACGCAAATGGGC 60.278 61.111 0.00 0.00 0.00 5.36
2641 3685 2.408835 CATCGACGCAAATGGGCC 59.591 61.111 0.00 0.00 0.00 5.80
2642 3686 2.114670 CATCGACGCAAATGGGCCT 61.115 57.895 4.53 0.00 0.00 5.19
2643 3687 0.813610 CATCGACGCAAATGGGCCTA 60.814 55.000 4.53 0.00 0.00 3.93
2644 3688 0.814010 ATCGACGCAAATGGGCCTAC 60.814 55.000 4.53 0.00 0.00 3.18
2645 3689 1.743623 CGACGCAAATGGGCCTACA 60.744 57.895 4.53 0.00 0.00 2.74
2646 3690 1.800681 GACGCAAATGGGCCTACAC 59.199 57.895 4.53 0.00 0.00 2.90
2647 3691 1.654023 GACGCAAATGGGCCTACACC 61.654 60.000 4.53 0.00 0.00 4.16
2655 3699 4.433194 GGCCTACACCCCCTCCCT 62.433 72.222 0.00 0.00 0.00 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.950210 TGAGTTACGTTATGTTACTAGCTAAGT 58.050 33.333 0.00 0.00 40.36 2.24
1 2 9.778993 TTGAGTTACGTTATGTTACTAGCTAAG 57.221 33.333 0.00 0.00 40.36 2.18
4 5 8.919661 GTTTTGAGTTACGTTATGTTACTAGCT 58.080 33.333 0.00 0.00 40.36 3.32
5 6 8.702438 TGTTTTGAGTTACGTTATGTTACTAGC 58.298 33.333 0.00 0.00 40.36 3.42
11 12 9.015577 CACATTTGTTTTGAGTTACGTTATGTT 57.984 29.630 0.00 0.00 0.00 2.71
12 13 7.166804 GCACATTTGTTTTGAGTTACGTTATGT 59.833 33.333 0.00 0.00 0.00 2.29
13 14 7.378461 AGCACATTTGTTTTGAGTTACGTTATG 59.622 33.333 0.00 0.00 0.00 1.90
14 15 7.422399 AGCACATTTGTTTTGAGTTACGTTAT 58.578 30.769 0.00 0.00 0.00 1.89
15 16 6.787225 AGCACATTTGTTTTGAGTTACGTTA 58.213 32.000 0.00 0.00 0.00 3.18
16 17 5.646606 AGCACATTTGTTTTGAGTTACGTT 58.353 33.333 0.00 0.00 0.00 3.99
17 18 5.243426 AGCACATTTGTTTTGAGTTACGT 57.757 34.783 0.00 0.00 0.00 3.57
18 19 7.378461 ACATAAGCACATTTGTTTTGAGTTACG 59.622 33.333 0.00 0.00 0.00 3.18
19 20 8.479280 CACATAAGCACATTTGTTTTGAGTTAC 58.521 33.333 0.00 0.00 0.00 2.50
20 21 7.651304 CCACATAAGCACATTTGTTTTGAGTTA 59.349 33.333 0.00 0.00 0.00 2.24
21 22 6.479660 CCACATAAGCACATTTGTTTTGAGTT 59.520 34.615 0.00 0.00 0.00 3.01
22 23 5.984926 CCACATAAGCACATTTGTTTTGAGT 59.015 36.000 0.00 0.00 0.00 3.41
23 24 5.107375 GCCACATAAGCACATTTGTTTTGAG 60.107 40.000 0.00 0.00 0.00 3.02
24 25 4.749099 GCCACATAAGCACATTTGTTTTGA 59.251 37.500 0.00 0.00 0.00 2.69
25 26 4.510711 TGCCACATAAGCACATTTGTTTTG 59.489 37.500 0.00 0.00 34.69 2.44
26 27 4.701765 TGCCACATAAGCACATTTGTTTT 58.298 34.783 0.00 0.00 34.69 2.43
27 28 4.333913 TGCCACATAAGCACATTTGTTT 57.666 36.364 0.00 0.00 34.69 2.83
28 29 4.333913 TTGCCACATAAGCACATTTGTT 57.666 36.364 0.00 0.00 40.69 2.83
29 30 4.309099 CTTTGCCACATAAGCACATTTGT 58.691 39.130 0.00 0.00 40.69 2.83
30 31 3.123959 GCTTTGCCACATAAGCACATTTG 59.876 43.478 0.00 0.00 44.70 2.32
31 32 3.328505 GCTTTGCCACATAAGCACATTT 58.671 40.909 0.00 0.00 44.70 2.32
32 33 2.671914 CGCTTTGCCACATAAGCACATT 60.672 45.455 0.00 0.00 45.40 2.71
33 34 1.135315 CGCTTTGCCACATAAGCACAT 60.135 47.619 0.00 0.00 45.40 3.21
34 35 0.240678 CGCTTTGCCACATAAGCACA 59.759 50.000 0.00 0.00 45.40 4.57
35 36 0.240945 ACGCTTTGCCACATAAGCAC 59.759 50.000 0.00 0.00 45.40 4.40
36 37 0.958091 AACGCTTTGCCACATAAGCA 59.042 45.000 0.00 0.00 45.40 3.91
37 38 2.911819 TAACGCTTTGCCACATAAGC 57.088 45.000 0.00 0.00 42.51 3.09
38 39 7.247728 TCTTTATTAACGCTTTGCCACATAAG 58.752 34.615 0.00 0.00 0.00 1.73
39 40 7.147143 TCTTTATTAACGCTTTGCCACATAA 57.853 32.000 0.00 0.00 0.00 1.90
40 41 6.745159 TCTTTATTAACGCTTTGCCACATA 57.255 33.333 0.00 0.00 0.00 2.29
41 42 5.637006 TCTTTATTAACGCTTTGCCACAT 57.363 34.783 0.00 0.00 0.00 3.21
42 43 5.440234 TTCTTTATTAACGCTTTGCCACA 57.560 34.783 0.00 0.00 0.00 4.17
43 44 6.757026 TTTTCTTTATTAACGCTTTGCCAC 57.243 33.333 0.00 0.00 0.00 5.01
44 45 6.422400 CCTTTTTCTTTATTAACGCTTTGCCA 59.578 34.615 0.00 0.00 0.00 4.92
45 46 6.422701 ACCTTTTTCTTTATTAACGCTTTGCC 59.577 34.615 0.00 0.00 0.00 4.52
46 47 7.042992 ACACCTTTTTCTTTATTAACGCTTTGC 60.043 33.333 0.00 0.00 0.00 3.68
47 48 8.347729 ACACCTTTTTCTTTATTAACGCTTTG 57.652 30.769 0.00 0.00 0.00 2.77
48 49 8.936070 AACACCTTTTTCTTTATTAACGCTTT 57.064 26.923 0.00 0.00 0.00 3.51
49 50 8.813282 CAAACACCTTTTTCTTTATTAACGCTT 58.187 29.630 0.00 0.00 0.00 4.68
50 51 7.977293 ACAAACACCTTTTTCTTTATTAACGCT 59.023 29.630 0.00 0.00 0.00 5.07
51 52 8.053653 CACAAACACCTTTTTCTTTATTAACGC 58.946 33.333 0.00 0.00 0.00 4.84
52 53 8.536407 CCACAAACACCTTTTTCTTTATTAACG 58.464 33.333 0.00 0.00 0.00 3.18
53 54 9.373603 ACCACAAACACCTTTTTCTTTATTAAC 57.626 29.630 0.00 0.00 0.00 2.01
54 55 9.372369 CACCACAAACACCTTTTTCTTTATTAA 57.628 29.630 0.00 0.00 0.00 1.40
55 56 8.750298 TCACCACAAACACCTTTTTCTTTATTA 58.250 29.630 0.00 0.00 0.00 0.98
56 57 7.547722 GTCACCACAAACACCTTTTTCTTTATT 59.452 33.333 0.00 0.00 0.00 1.40
57 58 7.039270 GTCACCACAAACACCTTTTTCTTTAT 58.961 34.615 0.00 0.00 0.00 1.40
58 59 6.015350 TGTCACCACAAACACCTTTTTCTTTA 60.015 34.615 0.00 0.00 0.00 1.85
59 60 5.221541 TGTCACCACAAACACCTTTTTCTTT 60.222 36.000 0.00 0.00 0.00 2.52
60 61 4.282195 TGTCACCACAAACACCTTTTTCTT 59.718 37.500 0.00 0.00 0.00 2.52
61 62 3.829601 TGTCACCACAAACACCTTTTTCT 59.170 39.130 0.00 0.00 0.00 2.52
62 63 4.181309 TGTCACCACAAACACCTTTTTC 57.819 40.909 0.00 0.00 0.00 2.29
63 64 4.817318 ATGTCACCACAAACACCTTTTT 57.183 36.364 0.00 0.00 35.64 1.94
64 65 5.923733 TTATGTCACCACAAACACCTTTT 57.076 34.783 0.00 0.00 35.64 2.27
65 66 7.232534 ACATATTATGTCACCACAAACACCTTT 59.767 33.333 3.40 0.00 39.92 3.11
66 67 6.719370 ACATATTATGTCACCACAAACACCTT 59.281 34.615 3.40 0.00 39.92 3.50
67 68 6.245408 ACATATTATGTCACCACAAACACCT 58.755 36.000 3.40 0.00 39.92 4.00
68 69 6.509418 ACATATTATGTCACCACAAACACC 57.491 37.500 3.40 0.00 39.92 4.16
69 70 8.726988 AGTAACATATTATGTCACCACAAACAC 58.273 33.333 9.68 0.00 44.07 3.32
70 71 8.726068 CAGTAACATATTATGTCACCACAAACA 58.274 33.333 9.68 0.00 44.07 2.83
71 72 8.726988 ACAGTAACATATTATGTCACCACAAAC 58.273 33.333 9.68 0.56 44.07 2.93
72 73 8.856153 ACAGTAACATATTATGTCACCACAAA 57.144 30.769 9.68 0.00 44.07 2.83
73 74 9.945904 TTACAGTAACATATTATGTCACCACAA 57.054 29.630 9.68 0.00 44.07 3.33
74 75 9.373603 GTTACAGTAACATATTATGTCACCACA 57.626 33.333 17.24 0.00 44.07 4.17
75 76 9.373603 TGTTACAGTAACATATTATGTCACCAC 57.626 33.333 20.32 6.32 44.07 4.16
90 91 7.718272 TTGAGGTGTGTTATGTTACAGTAAC 57.282 36.000 15.58 15.58 39.11 2.50
91 92 7.094975 GCATTGAGGTGTGTTATGTTACAGTAA 60.095 37.037 0.00 0.00 0.00 2.24
92 93 6.370442 GCATTGAGGTGTGTTATGTTACAGTA 59.630 38.462 0.00 0.00 0.00 2.74
93 94 5.181245 GCATTGAGGTGTGTTATGTTACAGT 59.819 40.000 0.00 0.00 0.00 3.55
94 95 5.181056 TGCATTGAGGTGTGTTATGTTACAG 59.819 40.000 0.00 0.00 0.00 2.74
95 96 5.066593 TGCATTGAGGTGTGTTATGTTACA 58.933 37.500 0.00 0.00 0.00 2.41
96 97 5.621197 TGCATTGAGGTGTGTTATGTTAC 57.379 39.130 0.00 0.00 0.00 2.50
97 98 6.641169 TTTGCATTGAGGTGTGTTATGTTA 57.359 33.333 0.00 0.00 0.00 2.41
98 99 5.528043 TTTGCATTGAGGTGTGTTATGTT 57.472 34.783 0.00 0.00 0.00 2.71
99 100 5.528043 TTTTGCATTGAGGTGTGTTATGT 57.472 34.783 0.00 0.00 0.00 2.29
100 101 5.927689 ACATTTTGCATTGAGGTGTGTTATG 59.072 36.000 0.00 0.00 0.00 1.90
101 102 5.927689 CACATTTTGCATTGAGGTGTGTTAT 59.072 36.000 0.00 0.00 32.92 1.89
102 103 5.163468 ACACATTTTGCATTGAGGTGTGTTA 60.163 36.000 12.18 0.00 44.21 2.41
103 104 4.121317 CACATTTTGCATTGAGGTGTGTT 58.879 39.130 0.00 0.00 32.92 3.32
104 105 3.132646 ACACATTTTGCATTGAGGTGTGT 59.867 39.130 12.18 12.17 42.51 3.72
105 106 3.719924 ACACATTTTGCATTGAGGTGTG 58.280 40.909 12.18 11.68 40.77 3.82
106 107 3.638160 AGACACATTTTGCATTGAGGTGT 59.362 39.130 12.63 12.63 40.36 4.16
107 108 4.247267 AGACACATTTTGCATTGAGGTG 57.753 40.909 7.45 7.45 0.00 4.00
108 109 4.826733 TGTAGACACATTTTGCATTGAGGT 59.173 37.500 0.00 0.00 0.00 3.85
109 110 5.375417 TGTAGACACATTTTGCATTGAGG 57.625 39.130 0.00 0.00 0.00 3.86
110 111 5.630680 GGTTGTAGACACATTTTGCATTGAG 59.369 40.000 0.00 0.00 33.76 3.02
111 112 5.301551 AGGTTGTAGACACATTTTGCATTGA 59.698 36.000 0.00 0.00 33.76 2.57
112 113 5.531634 AGGTTGTAGACACATTTTGCATTG 58.468 37.500 0.00 0.00 33.76 2.82
113 114 5.789643 AGGTTGTAGACACATTTTGCATT 57.210 34.783 0.00 0.00 33.76 3.56
114 115 6.892658 TTAGGTTGTAGACACATTTTGCAT 57.107 33.333 0.00 0.00 33.76 3.96
115 116 6.892658 ATTAGGTTGTAGACACATTTTGCA 57.107 33.333 0.00 0.00 33.76 4.08
116 117 9.855021 ATTTATTAGGTTGTAGACACATTTTGC 57.145 29.630 0.00 0.00 33.76 3.68
121 122 9.396022 CCTTCATTTATTAGGTTGTAGACACAT 57.604 33.333 0.00 0.00 33.76 3.21
122 123 7.335924 GCCTTCATTTATTAGGTTGTAGACACA 59.664 37.037 0.00 0.00 0.00 3.72
123 124 7.553044 AGCCTTCATTTATTAGGTTGTAGACAC 59.447 37.037 0.00 0.00 0.00 3.67
124 125 7.630082 AGCCTTCATTTATTAGGTTGTAGACA 58.370 34.615 0.00 0.00 0.00 3.41
125 126 8.398665 CAAGCCTTCATTTATTAGGTTGTAGAC 58.601 37.037 0.00 0.00 0.00 2.59
126 127 7.067008 GCAAGCCTTCATTTATTAGGTTGTAGA 59.933 37.037 0.00 0.00 0.00 2.59
127 128 7.148086 TGCAAGCCTTCATTTATTAGGTTGTAG 60.148 37.037 0.00 0.00 0.00 2.74
128 129 6.661377 TGCAAGCCTTCATTTATTAGGTTGTA 59.339 34.615 0.00 0.00 0.00 2.41
129 130 5.480073 TGCAAGCCTTCATTTATTAGGTTGT 59.520 36.000 0.00 0.00 0.00 3.32
130 131 5.964758 TGCAAGCCTTCATTTATTAGGTTG 58.035 37.500 0.00 0.00 0.00 3.77
131 132 6.380846 TCATGCAAGCCTTCATTTATTAGGTT 59.619 34.615 0.00 0.00 0.00 3.50
132 133 5.893255 TCATGCAAGCCTTCATTTATTAGGT 59.107 36.000 0.00 0.00 0.00 3.08
133 134 6.183360 TGTCATGCAAGCCTTCATTTATTAGG 60.183 38.462 0.00 0.00 0.00 2.69
134 135 6.694411 GTGTCATGCAAGCCTTCATTTATTAG 59.306 38.462 0.00 0.00 0.00 1.73
135 136 6.377996 AGTGTCATGCAAGCCTTCATTTATTA 59.622 34.615 0.00 0.00 0.00 0.98
136 137 5.186409 AGTGTCATGCAAGCCTTCATTTATT 59.814 36.000 0.00 0.00 0.00 1.40
137 138 4.708421 AGTGTCATGCAAGCCTTCATTTAT 59.292 37.500 0.00 0.00 0.00 1.40
138 139 4.081406 AGTGTCATGCAAGCCTTCATTTA 58.919 39.130 0.00 0.00 0.00 1.40
139 140 2.895404 AGTGTCATGCAAGCCTTCATTT 59.105 40.909 0.00 0.00 0.00 2.32
140 141 2.522185 AGTGTCATGCAAGCCTTCATT 58.478 42.857 0.00 0.00 0.00 2.57
141 142 2.211250 AGTGTCATGCAAGCCTTCAT 57.789 45.000 0.00 0.00 0.00 2.57
142 143 2.857186 TAGTGTCATGCAAGCCTTCA 57.143 45.000 0.00 0.00 0.00 3.02
143 144 4.708726 ATTTAGTGTCATGCAAGCCTTC 57.291 40.909 0.00 0.00 0.00 3.46
144 145 5.473066 AAATTTAGTGTCATGCAAGCCTT 57.527 34.783 0.00 0.00 0.00 4.35
145 146 6.153340 ACATAAATTTAGTGTCATGCAAGCCT 59.847 34.615 3.94 0.00 0.00 4.58
146 147 6.332630 ACATAAATTTAGTGTCATGCAAGCC 58.667 36.000 3.94 0.00 0.00 4.35
147 148 7.816945 AACATAAATTTAGTGTCATGCAAGC 57.183 32.000 3.94 0.00 0.00 4.01
151 152 9.931210 GGTAGTAACATAAATTTAGTGTCATGC 57.069 33.333 3.94 0.31 0.00 4.06
154 155 9.439500 GTGGGTAGTAACATAAATTTAGTGTCA 57.561 33.333 3.94 0.00 0.00 3.58
155 156 9.662947 AGTGGGTAGTAACATAAATTTAGTGTC 57.337 33.333 3.94 0.00 0.00 3.67
163 164 9.793259 CCATTCATAGTGGGTAGTAACATAAAT 57.207 33.333 0.00 0.00 32.98 1.40
164 165 8.774183 ACCATTCATAGTGGGTAGTAACATAAA 58.226 33.333 0.00 0.00 41.14 1.40
165 166 8.326765 ACCATTCATAGTGGGTAGTAACATAA 57.673 34.615 0.00 0.00 41.14 1.90
166 167 7.924358 ACCATTCATAGTGGGTAGTAACATA 57.076 36.000 0.00 0.00 41.14 2.29
167 168 6.824958 ACCATTCATAGTGGGTAGTAACAT 57.175 37.500 0.00 0.00 41.14 2.71
168 169 7.356089 CTACCATTCATAGTGGGTAGTAACA 57.644 40.000 8.23 0.00 44.98 2.41
174 175 7.924358 ATGTTACTACCATTCATAGTGGGTA 57.076 36.000 0.00 0.00 41.14 3.69
175 176 6.824958 ATGTTACTACCATTCATAGTGGGT 57.175 37.500 0.00 0.00 41.14 4.51
176 177 8.088981 GTCTATGTTACTACCATTCATAGTGGG 58.911 40.741 0.00 0.00 41.14 4.61
177 178 8.861086 AGTCTATGTTACTACCATTCATAGTGG 58.139 37.037 0.00 0.00 42.55 4.00
204 205 9.338622 GCTGGGAAGTAACATGTATATTTTACT 57.661 33.333 0.00 5.48 39.99 2.24
205 206 9.338622 AGCTGGGAAGTAACATGTATATTTTAC 57.661 33.333 0.00 0.00 32.25 2.01
207 208 9.561069 CTAGCTGGGAAGTAACATGTATATTTT 57.439 33.333 0.00 0.00 0.00 1.82
208 209 7.661847 GCTAGCTGGGAAGTAACATGTATATTT 59.338 37.037 7.70 0.00 0.00 1.40
209 210 7.162082 GCTAGCTGGGAAGTAACATGTATATT 58.838 38.462 7.70 0.00 0.00 1.28
210 211 6.295916 GGCTAGCTGGGAAGTAACATGTATAT 60.296 42.308 15.72 0.00 0.00 0.86
211 212 5.011738 GGCTAGCTGGGAAGTAACATGTATA 59.988 44.000 15.72 0.00 0.00 1.47
212 213 4.202367 GGCTAGCTGGGAAGTAACATGTAT 60.202 45.833 15.72 0.00 0.00 2.29
213 214 3.134081 GGCTAGCTGGGAAGTAACATGTA 59.866 47.826 15.72 0.00 0.00 2.29
214 215 2.092914 GGCTAGCTGGGAAGTAACATGT 60.093 50.000 15.72 0.00 0.00 3.21
215 216 2.171448 AGGCTAGCTGGGAAGTAACATG 59.829 50.000 15.72 0.00 0.00 3.21
216 217 2.436173 GAGGCTAGCTGGGAAGTAACAT 59.564 50.000 15.72 0.00 0.00 2.71
217 218 1.831736 GAGGCTAGCTGGGAAGTAACA 59.168 52.381 15.72 0.00 0.00 2.41
218 219 1.831736 TGAGGCTAGCTGGGAAGTAAC 59.168 52.381 15.72 0.00 0.00 2.50
219 220 1.831736 GTGAGGCTAGCTGGGAAGTAA 59.168 52.381 15.72 0.00 0.00 2.24
220 221 1.486211 GTGAGGCTAGCTGGGAAGTA 58.514 55.000 15.72 0.00 0.00 2.24
221 222 1.608717 CGTGAGGCTAGCTGGGAAGT 61.609 60.000 15.72 0.00 0.00 3.01
222 223 1.142748 CGTGAGGCTAGCTGGGAAG 59.857 63.158 15.72 0.00 0.00 3.46
223 224 3.019003 GCGTGAGGCTAGCTGGGAA 62.019 63.158 15.72 0.00 39.11 3.97
224 225 3.461773 GCGTGAGGCTAGCTGGGA 61.462 66.667 15.72 0.00 39.11 4.37
234 235 1.375396 TCGAAATGTGGGCGTGAGG 60.375 57.895 0.00 0.00 0.00 3.86
235 236 0.670546 AGTCGAAATGTGGGCGTGAG 60.671 55.000 0.00 0.00 0.00 3.51
236 237 0.948623 CAGTCGAAATGTGGGCGTGA 60.949 55.000 0.00 0.00 0.00 4.35
237 238 1.497278 CAGTCGAAATGTGGGCGTG 59.503 57.895 0.00 0.00 0.00 5.34
238 239 1.671054 CCAGTCGAAATGTGGGCGT 60.671 57.895 0.00 0.00 0.00 5.68
239 240 3.039202 GCCAGTCGAAATGTGGGCG 62.039 63.158 6.52 0.00 0.00 6.13
240 241 2.877691 GCCAGTCGAAATGTGGGC 59.122 61.111 6.52 0.00 0.00 5.36
241 242 2.398554 CGGCCAGTCGAAATGTGGG 61.399 63.158 2.24 0.00 0.00 4.61
242 243 0.390603 TACGGCCAGTCGAAATGTGG 60.391 55.000 2.24 0.00 0.00 4.17
243 244 0.999406 CTACGGCCAGTCGAAATGTG 59.001 55.000 2.24 0.00 0.00 3.21
244 245 0.108329 CCTACGGCCAGTCGAAATGT 60.108 55.000 2.24 0.00 0.00 2.71
245 246 0.174845 TCCTACGGCCAGTCGAAATG 59.825 55.000 2.24 0.00 0.00 2.32
246 247 0.460311 CTCCTACGGCCAGTCGAAAT 59.540 55.000 2.24 0.00 0.00 2.17
247 248 1.601419 CCTCCTACGGCCAGTCGAAA 61.601 60.000 2.24 0.00 0.00 3.46
248 249 2.050350 CCTCCTACGGCCAGTCGAA 61.050 63.158 2.24 0.00 0.00 3.71
249 250 2.439701 CCTCCTACGGCCAGTCGA 60.440 66.667 2.24 0.81 0.00 4.20
250 251 3.528370 CCCTCCTACGGCCAGTCG 61.528 72.222 2.24 0.00 0.00 4.18
251 252 3.851128 GCCCTCCTACGGCCAGTC 61.851 72.222 2.24 0.00 40.78 3.51
254 255 2.725127 ATATCGCCCTCCTACGGCCA 62.725 60.000 2.24 0.00 43.98 5.36
255 256 1.982938 ATATCGCCCTCCTACGGCC 60.983 63.158 0.00 0.00 43.98 6.13
256 257 1.215647 CATATCGCCCTCCTACGGC 59.784 63.158 0.00 0.00 43.38 5.68
257 258 0.526662 GACATATCGCCCTCCTACGG 59.473 60.000 0.00 0.00 0.00 4.02
258 259 1.200252 CAGACATATCGCCCTCCTACG 59.800 57.143 0.00 0.00 0.00 3.51
259 260 1.546476 CCAGACATATCGCCCTCCTAC 59.454 57.143 0.00 0.00 0.00 3.18
260 261 1.924731 CCAGACATATCGCCCTCCTA 58.075 55.000 0.00 0.00 0.00 2.94
261 262 1.476007 GCCAGACATATCGCCCTCCT 61.476 60.000 0.00 0.00 0.00 3.69
262 263 1.004440 GCCAGACATATCGCCCTCC 60.004 63.158 0.00 0.00 0.00 4.30
263 264 1.004440 GGCCAGACATATCGCCCTC 60.004 63.158 0.00 0.00 35.23 4.30
264 265 2.872388 CGGCCAGACATATCGCCCT 61.872 63.158 2.24 0.00 38.19 5.19
265 266 2.357517 CGGCCAGACATATCGCCC 60.358 66.667 2.24 0.00 38.19 6.13
266 267 1.956170 CACGGCCAGACATATCGCC 60.956 63.158 2.24 0.00 38.07 5.54
267 268 0.810031 AACACGGCCAGACATATCGC 60.810 55.000 2.24 0.00 0.00 4.58
268 269 2.502213 TAACACGGCCAGACATATCG 57.498 50.000 2.24 0.00 0.00 2.92
269 270 5.751243 AAAATAACACGGCCAGACATATC 57.249 39.130 2.24 0.00 0.00 1.63
270 271 7.255451 CCAATAAAATAACACGGCCAGACATAT 60.255 37.037 2.24 0.00 0.00 1.78
271 272 6.038825 CCAATAAAATAACACGGCCAGACATA 59.961 38.462 2.24 0.00 0.00 2.29
272 273 5.163561 CCAATAAAATAACACGGCCAGACAT 60.164 40.000 2.24 0.00 0.00 3.06
273 274 4.156922 CCAATAAAATAACACGGCCAGACA 59.843 41.667 2.24 0.00 0.00 3.41
274 275 4.439563 CCCAATAAAATAACACGGCCAGAC 60.440 45.833 2.24 0.00 0.00 3.51
275 276 3.697045 CCCAATAAAATAACACGGCCAGA 59.303 43.478 2.24 0.00 0.00 3.86
276 277 3.181480 CCCCAATAAAATAACACGGCCAG 60.181 47.826 2.24 0.00 0.00 4.85
277 278 2.761208 CCCCAATAAAATAACACGGCCA 59.239 45.455 2.24 0.00 0.00 5.36
278 279 2.482316 GCCCCAATAAAATAACACGGCC 60.482 50.000 0.00 0.00 0.00 6.13
279 280 2.166664 TGCCCCAATAAAATAACACGGC 59.833 45.455 0.00 0.00 0.00 5.68
280 281 3.193691 TGTGCCCCAATAAAATAACACGG 59.806 43.478 0.00 0.00 0.00 4.94
281 282 4.082463 ACTGTGCCCCAATAAAATAACACG 60.082 41.667 0.00 0.00 0.00 4.49
282 283 5.400066 ACTGTGCCCCAATAAAATAACAC 57.600 39.130 0.00 0.00 0.00 3.32
283 284 4.464597 GGACTGTGCCCCAATAAAATAACA 59.535 41.667 0.00 0.00 0.00 2.41
284 285 4.464597 TGGACTGTGCCCCAATAAAATAAC 59.535 41.667 0.00 0.00 0.00 1.89
285 286 4.678256 TGGACTGTGCCCCAATAAAATAA 58.322 39.130 0.00 0.00 0.00 1.40
286 287 4.323569 TGGACTGTGCCCCAATAAAATA 57.676 40.909 0.00 0.00 0.00 1.40
287 288 3.182887 TGGACTGTGCCCCAATAAAAT 57.817 42.857 0.00 0.00 0.00 1.82
288 289 2.685106 TGGACTGTGCCCCAATAAAA 57.315 45.000 0.00 0.00 0.00 1.52
289 290 2.685106 TTGGACTGTGCCCCAATAAA 57.315 45.000 0.00 0.00 37.50 1.40
293 294 0.039035 GGTATTGGACTGTGCCCCAA 59.961 55.000 2.38 2.38 45.40 4.12
294 295 0.844661 AGGTATTGGACTGTGCCCCA 60.845 55.000 0.00 0.00 0.00 4.96
295 296 0.331616 AAGGTATTGGACTGTGCCCC 59.668 55.000 0.00 0.00 0.00 5.80
296 297 1.818674 CAAAGGTATTGGACTGTGCCC 59.181 52.381 0.00 0.00 0.00 5.36
297 298 2.790433 TCAAAGGTATTGGACTGTGCC 58.210 47.619 0.00 0.00 0.00 5.01
298 299 4.458989 TGAATCAAAGGTATTGGACTGTGC 59.541 41.667 0.00 0.00 0.00 4.57
299 300 6.207417 AGTTGAATCAAAGGTATTGGACTGTG 59.793 38.462 0.00 0.00 0.00 3.66
300 301 6.207417 CAGTTGAATCAAAGGTATTGGACTGT 59.793 38.462 0.00 0.00 0.00 3.55
309 310 7.360861 CGTTAGATTGCAGTTGAATCAAAGGTA 60.361 37.037 0.00 0.00 33.03 3.08
313 314 5.153513 GCGTTAGATTGCAGTTGAATCAAA 58.846 37.500 0.00 0.00 33.03 2.69
326 327 3.374058 ACAATTTCCGAGGCGTTAGATTG 59.626 43.478 0.00 0.00 0.00 2.67
379 380 1.003839 TGCGGGCAGTTAGTTCCTG 60.004 57.895 0.00 0.00 0.00 3.86
420 421 3.195182 GGAGAGGTTAGGGGCGATATTAC 59.805 52.174 0.00 0.00 0.00 1.89
436 437 0.103937 GCGACTGGAATCAGGAGAGG 59.896 60.000 0.00 0.00 44.99 3.69
463 464 1.461144 GAGGAGGAGATAGGGCCGA 59.539 63.158 0.00 0.00 0.00 5.54
470 471 1.361176 TGGGCGAGGAGGAGGAGATA 61.361 60.000 0.00 0.00 0.00 1.98
495 507 1.500108 CATGATGCTCGAGGAGAAGC 58.500 55.000 15.58 0.00 0.00 3.86
503 515 1.071987 GGATGGCCATGATGCTCGA 59.928 57.895 26.56 0.00 0.00 4.04
665 678 3.161450 TAGGCAGGATGGGTCGGC 61.161 66.667 0.00 0.00 35.86 5.54
724 737 0.732880 CAGACGTCGGCAAAGTCGAT 60.733 55.000 10.46 0.00 42.90 3.59
738 757 3.229276 AGAAAGATGAGAGTGCAGACG 57.771 47.619 0.00 0.00 0.00 4.18
748 767 3.572584 GGCAGCAACAAAGAAAGATGAG 58.427 45.455 0.00 0.00 0.00 2.90
806 825 6.777091 TGTACCGTATATTAGAAGCACCCTTA 59.223 38.462 0.00 0.00 0.00 2.69
826 846 5.699001 TCATGTGACACAACATAGTTGTACC 59.301 40.000 13.23 10.01 38.75 3.34
835 855 9.630098 GAAGAAAATTATCATGTGACACAACAT 57.370 29.630 13.23 9.80 41.50 2.71
837 857 8.081633 TGGAAGAAAATTATCATGTGACACAAC 58.918 33.333 13.23 0.00 0.00 3.32
841 861 9.685276 ACTATGGAAGAAAATTATCATGTGACA 57.315 29.630 0.00 0.00 0.00 3.58
857 877 6.695278 CGTTGCAAAAGAAAAACTATGGAAGA 59.305 34.615 0.00 0.00 30.97 2.87
878 898 2.489971 TGTCCAACTTAAGCTCCGTTG 58.510 47.619 1.29 12.99 38.14 4.10
905 925 3.118884 GGCCGAACAGGAGTATTACTTGA 60.119 47.826 0.00 0.00 45.00 3.02
947 969 1.663388 TGTGTGTTGTAGCCGCGAG 60.663 57.895 8.23 0.00 0.00 5.03
1038 1069 2.037053 CTCTCGGTCGAGCATGGAT 58.963 57.895 15.89 0.00 41.71 3.41
1136 1179 3.185594 CCACAAATAGAACGCGACAGAAA 59.814 43.478 15.93 0.00 0.00 2.52
1157 1200 3.490761 CCCATTGCACGGAAATAATCACC 60.491 47.826 2.77 0.00 0.00 4.02
1176 1219 5.104402 TCTGATGCTGATGAACTATTTCCCA 60.104 40.000 0.00 0.00 0.00 4.37
1238 1283 5.105997 GCAAACTTAGGAAGCACTTGATCAT 60.106 40.000 0.00 0.00 0.00 2.45
1242 1287 3.815401 GAGCAAACTTAGGAAGCACTTGA 59.185 43.478 0.00 0.00 0.00 3.02
1304 1352 7.643528 TCTTAGCATTACTATCGAAGCATTG 57.356 36.000 0.00 0.00 0.00 2.82
1335 1383 3.708631 AGGAGCACATTGTAGTGATAGCT 59.291 43.478 0.00 0.00 42.05 3.32
1367 1415 5.335583 CCAAAGATGTTAGAATTTGCACCGA 60.336 40.000 0.00 0.00 32.54 4.69
1461 1511 0.178990 AAGCAAAGGTCACCAGTCCC 60.179 55.000 0.00 0.00 0.00 4.46
1476 1526 0.250901 GAGAAGCCCTTGGTGAAGCA 60.251 55.000 0.00 0.00 0.00 3.91
1506 1556 0.107508 CCATCTACACACTGGCCCTG 60.108 60.000 0.00 0.00 0.00 4.45
1531 1581 2.639286 CAGCCACCTCGTTGTTGC 59.361 61.111 0.00 0.00 0.00 4.17
1567 1617 2.799371 GGTAGACGTCCTCGCCAG 59.201 66.667 13.01 0.00 41.18 4.85
1581 1631 0.958382 GGATGTTGTTGCTGCCGGTA 60.958 55.000 1.90 0.00 0.00 4.02
1586 1636 0.610232 AGAGGGGATGTTGTTGCTGC 60.610 55.000 0.00 0.00 0.00 5.25
1643 1697 9.455847 GCTTCCTGATTGTATCAATATTGTTTC 57.544 33.333 14.97 5.86 39.11 2.78
1750 1816 5.747565 TCAGTGCTTCGTCAACATAAAAAG 58.252 37.500 0.00 0.00 0.00 2.27
1802 1870 9.162764 GTAATCAAAGTTACTTGCTTCCATAGA 57.837 33.333 0.00 0.00 32.97 1.98
1803 1871 8.946085 TGTAATCAAAGTTACTTGCTTCCATAG 58.054 33.333 0.00 0.00 35.94 2.23
1804 1872 8.856153 TGTAATCAAAGTTACTTGCTTCCATA 57.144 30.769 0.00 0.00 35.94 2.74
1805 1873 7.759489 TGTAATCAAAGTTACTTGCTTCCAT 57.241 32.000 0.00 0.00 35.94 3.41
1846 1914 9.305925 CATTGTATGCTTCCTTTTCTATTTTCC 57.694 33.333 0.00 0.00 0.00 3.13
2027 2993 5.360591 TGTTTCGGCACCAACAAAATTAAT 58.639 33.333 0.00 0.00 29.81 1.40
2103 3069 6.127786 GCTTCCAATTCTTTGATTCACTAGCT 60.128 38.462 0.00 0.00 34.60 3.32
2177 3170 8.182881 ACAGTCGTTCTTCATAATCTGTAGTAC 58.817 37.037 0.00 0.00 33.96 2.73
2199 3192 3.071602 AGTCATGCTTCCAACACTACAGT 59.928 43.478 0.00 0.00 0.00 3.55
2320 3363 9.923143 CCATATCTAAACAATTATCGTCTGGTA 57.077 33.333 0.00 0.00 0.00 3.25
2330 3373 8.271458 TGACCTGCTTCCATATCTAAACAATTA 58.729 33.333 0.00 0.00 0.00 1.40
2351 3394 3.394606 ACAACCTGTACTTTCCATGACCT 59.605 43.478 0.00 0.00 0.00 3.85
2446 3490 2.551504 CGTGGGCCTTTGGTAGTTAAGT 60.552 50.000 4.53 0.00 0.00 2.24
2470 3514 8.606830 TGAGTGTCTGATCTAATAGGATAGCTA 58.393 37.037 0.00 0.00 0.00 3.32
2476 3520 6.945435 GGATCTGAGTGTCTGATCTAATAGGA 59.055 42.308 17.96 0.00 45.45 2.94
2501 3545 2.512974 GGCCGTACGATTGGGGTG 60.513 66.667 18.76 0.00 0.00 4.61
2518 3562 1.950909 GGGATCAGAGACTAGTCCACG 59.049 57.143 19.38 7.88 0.00 4.94
2544 3588 7.308169 GCGGTAGTTAATGGTAATATTGGGAAC 60.308 40.741 0.00 0.00 0.00 3.62
2545 3589 6.711645 GCGGTAGTTAATGGTAATATTGGGAA 59.288 38.462 0.00 0.00 0.00 3.97
2546 3590 6.232692 GCGGTAGTTAATGGTAATATTGGGA 58.767 40.000 0.00 0.00 0.00 4.37
2547 3591 5.121142 CGCGGTAGTTAATGGTAATATTGGG 59.879 44.000 0.00 0.00 0.00 4.12
2548 3592 5.697633 ACGCGGTAGTTAATGGTAATATTGG 59.302 40.000 12.47 0.00 0.00 3.16
2549 3593 6.643770 AGACGCGGTAGTTAATGGTAATATTG 59.356 38.462 12.47 0.00 0.00 1.90
2550 3594 6.752168 AGACGCGGTAGTTAATGGTAATATT 58.248 36.000 12.47 0.00 0.00 1.28
2551 3595 6.016024 TGAGACGCGGTAGTTAATGGTAATAT 60.016 38.462 12.47 0.00 0.00 1.28
2552 3596 5.299028 TGAGACGCGGTAGTTAATGGTAATA 59.701 40.000 12.47 0.00 0.00 0.98
2553 3597 4.098349 TGAGACGCGGTAGTTAATGGTAAT 59.902 41.667 12.47 0.00 0.00 1.89
2554 3598 3.443329 TGAGACGCGGTAGTTAATGGTAA 59.557 43.478 12.47 0.00 0.00 2.85
2555 3599 3.016031 TGAGACGCGGTAGTTAATGGTA 58.984 45.455 12.47 0.00 0.00 3.25
2556 3600 1.820519 TGAGACGCGGTAGTTAATGGT 59.179 47.619 12.47 0.00 0.00 3.55
2557 3601 2.159282 ACTGAGACGCGGTAGTTAATGG 60.159 50.000 12.47 0.00 33.26 3.16
2558 3602 3.106672 GACTGAGACGCGGTAGTTAATG 58.893 50.000 12.47 0.00 35.85 1.90
2559 3603 2.751259 TGACTGAGACGCGGTAGTTAAT 59.249 45.455 12.47 0.00 35.85 1.40
2560 3604 2.153645 TGACTGAGACGCGGTAGTTAA 58.846 47.619 12.47 0.00 35.85 2.01
2561 3605 1.736126 CTGACTGAGACGCGGTAGTTA 59.264 52.381 12.47 4.92 35.85 2.24
2562 3606 0.522180 CTGACTGAGACGCGGTAGTT 59.478 55.000 12.47 0.00 35.85 2.24
2563 3607 1.306642 CCTGACTGAGACGCGGTAGT 61.307 60.000 12.47 8.86 35.85 2.73
2564 3608 1.429825 CCTGACTGAGACGCGGTAG 59.570 63.158 12.47 5.30 35.85 3.18
2565 3609 2.697761 GCCTGACTGAGACGCGGTA 61.698 63.158 12.47 0.00 35.85 4.02
2566 3610 4.057428 GCCTGACTGAGACGCGGT 62.057 66.667 12.47 0.00 39.32 5.68
2569 3613 2.807045 CACGCCTGACTGAGACGC 60.807 66.667 0.00 0.00 0.00 5.19
2570 3614 1.730902 CACACGCCTGACTGAGACG 60.731 63.158 0.00 0.00 0.00 4.18
2571 3615 1.373497 CCACACGCCTGACTGAGAC 60.373 63.158 0.00 0.00 0.00 3.36
2572 3616 1.527433 CTCCACACGCCTGACTGAGA 61.527 60.000 0.00 0.00 0.00 3.27
2573 3617 1.080230 CTCCACACGCCTGACTGAG 60.080 63.158 0.00 0.00 0.00 3.35
2574 3618 3.051210 CTCCACACGCCTGACTGA 58.949 61.111 0.00 0.00 0.00 3.41
2575 3619 2.740055 GCTCCACACGCCTGACTG 60.740 66.667 0.00 0.00 0.00 3.51
2576 3620 4.008933 GGCTCCACACGCCTGACT 62.009 66.667 0.00 0.00 44.17 3.41
2583 3627 2.360350 AATGCCAGGCTCCACACG 60.360 61.111 14.15 0.00 0.00 4.49
2584 3628 2.048603 GGAATGCCAGGCTCCACAC 61.049 63.158 14.15 0.00 0.00 3.82
2585 3629 2.356278 GGAATGCCAGGCTCCACA 59.644 61.111 14.15 0.00 0.00 4.17
2586 3630 1.635817 TAGGGAATGCCAGGCTCCAC 61.636 60.000 19.18 10.05 35.15 4.02
2587 3631 0.918799 TTAGGGAATGCCAGGCTCCA 60.919 55.000 19.18 0.00 35.15 3.86
2588 3632 0.258774 TTTAGGGAATGCCAGGCTCC 59.741 55.000 14.15 12.27 35.15 4.70
2589 3633 1.393603 GTTTAGGGAATGCCAGGCTC 58.606 55.000 14.15 2.02 35.15 4.70
2590 3634 0.394352 CGTTTAGGGAATGCCAGGCT 60.394 55.000 14.15 0.00 35.15 4.58
2591 3635 1.384222 CCGTTTAGGGAATGCCAGGC 61.384 60.000 3.66 3.66 35.97 4.85
2592 3636 1.384222 GCCGTTTAGGGAATGCCAGG 61.384 60.000 0.00 0.00 41.48 4.45
2593 3637 1.714899 CGCCGTTTAGGGAATGCCAG 61.715 60.000 0.00 0.00 41.48 4.85
2594 3638 1.747367 CGCCGTTTAGGGAATGCCA 60.747 57.895 0.00 0.00 41.48 4.92
2595 3639 3.107447 CGCCGTTTAGGGAATGCC 58.893 61.111 0.00 0.00 41.48 4.40
2596 3640 2.407616 GCGCCGTTTAGGGAATGC 59.592 61.111 0.00 0.00 41.48 3.56
2597 3641 2.478033 GGGCGCCGTTTAGGGAATG 61.478 63.158 22.54 0.00 41.48 2.67
2598 3642 2.124445 GGGCGCCGTTTAGGGAAT 60.124 61.111 22.54 0.00 41.48 3.01
2599 3643 4.763646 CGGGCGCCGTTTAGGGAA 62.764 66.667 22.54 0.00 42.73 3.97
2609 3653 3.181169 GATGCATGTAACGGGCGCC 62.181 63.158 21.18 21.18 0.00 6.53
2610 3654 2.327940 GATGCATGTAACGGGCGC 59.672 61.111 2.46 0.00 0.00 6.53
2611 3655 1.880796 TCGATGCATGTAACGGGCG 60.881 57.895 2.46 0.00 0.00 6.13
2612 3656 1.641677 GTCGATGCATGTAACGGGC 59.358 57.895 2.46 3.89 0.00 6.13
2613 3657 1.924335 CGTCGATGCATGTAACGGG 59.076 57.895 2.46 2.89 0.00 5.28
2614 3658 1.272715 GCGTCGATGCATGTAACGG 59.727 57.895 24.45 0.10 34.11 4.44
2615 3659 0.368567 TTGCGTCGATGCATGTAACG 59.631 50.000 31.37 12.16 45.78 3.18
2616 3660 2.519002 TTTGCGTCGATGCATGTAAC 57.481 45.000 31.37 1.06 45.78 2.50
2617 3661 2.223226 CCATTTGCGTCGATGCATGTAA 60.223 45.455 31.37 22.82 45.78 2.41
2618 3662 1.330213 CCATTTGCGTCGATGCATGTA 59.670 47.619 31.37 19.92 45.78 2.29
2619 3663 0.099259 CCATTTGCGTCGATGCATGT 59.901 50.000 31.37 20.09 45.78 3.21
2620 3664 0.593008 CCCATTTGCGTCGATGCATG 60.593 55.000 31.37 25.69 45.78 4.06
2621 3665 1.729276 CCCATTTGCGTCGATGCAT 59.271 52.632 31.37 16.25 45.78 3.96
2622 3666 3.050166 GCCCATTTGCGTCGATGCA 62.050 57.895 27.87 27.87 44.61 3.96
2623 3667 2.278142 GCCCATTTGCGTCGATGC 60.278 61.111 22.77 22.77 0.00 3.91
2624 3668 0.813610 TAGGCCCATTTGCGTCGATG 60.814 55.000 0.00 0.00 0.00 3.84
2625 3669 0.814010 GTAGGCCCATTTGCGTCGAT 60.814 55.000 0.00 0.00 0.00 3.59
2626 3670 1.448893 GTAGGCCCATTTGCGTCGA 60.449 57.895 0.00 0.00 0.00 4.20
2627 3671 1.743623 TGTAGGCCCATTTGCGTCG 60.744 57.895 0.00 0.00 0.00 5.12
2628 3672 1.654023 GGTGTAGGCCCATTTGCGTC 61.654 60.000 0.00 0.00 0.00 5.19
2629 3673 1.677633 GGTGTAGGCCCATTTGCGT 60.678 57.895 0.00 0.00 0.00 5.24
2630 3674 3.196648 GGTGTAGGCCCATTTGCG 58.803 61.111 0.00 0.00 0.00 4.85
2638 3682 4.433194 AGGGAGGGGGTGTAGGCC 62.433 72.222 0.00 0.00 0.00 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.