Multiple sequence alignment - TraesCS1D01G119300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G119300 chr1D 100.000 5260 0 0 1 5260 115575421 115570162 0.000000e+00 9714.0
1 TraesCS1D01G119300 chr1D 89.412 85 8 1 4024 4107 483674651 483674567 7.200000e-19 106.0
2 TraesCS1D01G119300 chr1D 97.959 49 1 0 1316 1364 379456743 379456791 9.390000e-13 86.1
3 TraesCS1D01G119300 chr1A 96.306 2301 74 5 1 2292 126855907 126853609 0.000000e+00 3768.0
4 TraesCS1D01G119300 chr1A 96.400 500 16 1 4106 4605 126853305 126852808 0.000000e+00 822.0
5 TraesCS1D01G119300 chr1A 97.070 273 6 1 2307 2577 126853622 126853350 4.800000e-125 459.0
6 TraesCS1D01G119300 chr1A 89.545 220 23 0 5039 5258 16479121 16478902 4.010000e-71 279.0
7 TraesCS1D01G119300 chr1A 86.290 124 6 2 4720 4832 126852473 126852350 1.990000e-24 124.0
8 TraesCS1D01G119300 chr1A 95.238 63 2 1 3959 4021 126853365 126853304 1.210000e-16 99.0
9 TraesCS1D01G119300 chr1B 94.176 2301 72 9 1 2292 176999468 176997221 0.000000e+00 3450.0
10 TraesCS1D01G119300 chr1B 92.361 576 27 7 4106 4679 176996916 176996356 0.000000e+00 804.0
11 TraesCS1D01G119300 chr1B 85.544 754 93 14 3221 3960 685084266 685083515 0.000000e+00 774.0
12 TraesCS1D01G119300 chr1B 85.302 762 92 13 3221 3964 43957671 43958430 0.000000e+00 769.0
13 TraesCS1D01G119300 chr1B 97.436 273 5 1 2307 2577 176997234 176996962 1.030000e-126 464.0
14 TraesCS1D01G119300 chr1B 86.806 288 32 6 2594 2879 43956984 43957267 3.060000e-82 316.0
15 TraesCS1D01G119300 chr1B 87.500 272 32 2 2612 2883 685084934 685084665 3.950000e-81 313.0
16 TraesCS1D01G119300 chr1B 90.588 85 7 1 4024 4107 626712890 626712806 1.550000e-20 111.0
17 TraesCS1D01G119300 chr1B 81.081 111 19 2 4554 4663 633046387 633046496 2.610000e-13 87.9
18 TraesCS1D01G119300 chr1B 97.674 43 1 0 4670 4712 176995035 176994993 2.030000e-09 75.0
19 TraesCS1D01G119300 chr6D 96.101 1385 36 6 2577 3961 470143855 470142489 0.000000e+00 2242.0
20 TraesCS1D01G119300 chr6D 95.581 430 18 1 4830 5258 454645463 454645034 0.000000e+00 688.0
21 TraesCS1D01G119300 chr6D 85.659 258 29 7 2584 2836 472641088 472641342 1.120000e-66 265.0
22 TraesCS1D01G119300 chr5D 97.685 1123 26 0 2838 3960 450177701 450176579 0.000000e+00 1930.0
23 TraesCS1D01G119300 chr5D 87.121 264 29 5 2605 2867 80189229 80188970 1.430000e-75 294.0
24 TraesCS1D01G119300 chr5D 81.096 365 48 14 2590 2941 309003398 309003042 6.710000e-69 272.0
25 TraesCS1D01G119300 chr5D 87.912 91 7 3 4021 4109 52769160 52769248 2.590000e-18 104.0
26 TraesCS1D01G119300 chr5D 96.078 51 2 0 1314 1364 490514799 490514849 3.380000e-12 84.2
27 TraesCS1D01G119300 chr3A 94.172 755 40 2 3210 3962 723648957 723649709 0.000000e+00 1147.0
28 TraesCS1D01G119300 chr3A 95.544 561 25 0 3207 3767 723602891 723603451 0.000000e+00 898.0
29 TraesCS1D01G119300 chr3A 89.770 391 30 4 2632 3021 723602510 723602891 4.730000e-135 492.0
30 TraesCS1D01G119300 chr3A 87.966 349 26 5 2623 2971 723648588 723648920 1.060000e-106 398.0
31 TraesCS1D01G119300 chr3A 88.043 92 10 1 4018 4108 290449166 290449075 2.000000e-19 108.0
32 TraesCS1D01G119300 chr3A 92.857 56 3 1 1308 1362 130843945 130843890 4.370000e-11 80.5
33 TraesCS1D01G119300 chr7A 91.042 614 52 3 3348 3960 642525522 642524911 0.000000e+00 826.0
34 TraesCS1D01G119300 chr7A 86.159 643 56 23 2708 3349 642530002 642529392 0.000000e+00 664.0
35 TraesCS1D01G119300 chr2A 86.184 760 97 6 3204 3960 426373508 426374262 0.000000e+00 815.0
36 TraesCS1D01G119300 chr2A 92.453 53 3 1 1310 1362 587741675 587741624 2.030000e-09 75.0
37 TraesCS1D01G119300 chr5A 84.605 760 105 9 3207 3960 659503448 659502695 0.000000e+00 745.0
38 TraesCS1D01G119300 chr7D 97.190 427 11 1 4833 5258 29885807 29885381 0.000000e+00 721.0
39 TraesCS1D01G119300 chr7D 89.773 88 8 1 4023 4109 134196609 134196696 1.550000e-20 111.0
40 TraesCS1D01G119300 chr5B 84.190 759 103 11 3207 3961 522024617 522025362 0.000000e+00 721.0
41 TraesCS1D01G119300 chr3D 89.418 378 39 1 4833 5209 553221213 553220836 4.770000e-130 475.0
42 TraesCS1D01G119300 chr3D 89.560 364 37 1 4848 5210 528128037 528127674 1.330000e-125 460.0
43 TraesCS1D01G119300 chr3D 89.655 87 8 1 4022 4107 180394994 180394908 5.570000e-20 110.0
44 TraesCS1D01G119300 chr3D 89.412 85 8 1 4024 4107 121985624 121985540 7.200000e-19 106.0
45 TraesCS1D01G119300 chr4D 89.412 85 8 1 4024 4107 124628770 124628854 7.200000e-19 106.0
46 TraesCS1D01G119300 chr4B 88.636 88 8 2 4023 4109 595236153 595236067 7.200000e-19 106.0
47 TraesCS1D01G119300 chrUn 100.000 51 0 0 1314 1364 42338336 42338386 1.560000e-15 95.3
48 TraesCS1D01G119300 chrUn 100.000 51 0 0 1314 1364 42530613 42530563 1.560000e-15 95.3
49 TraesCS1D01G119300 chrUn 100.000 51 0 0 1314 1364 474064266 474064216 1.560000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G119300 chr1D 115570162 115575421 5259 True 9714.00 9714 100.00000 1 5260 1 chr1D.!!$R1 5259
1 TraesCS1D01G119300 chr1A 126852350 126855907 3557 True 1054.40 3768 94.26080 1 4832 5 chr1A.!!$R2 4831
2 TraesCS1D01G119300 chr1B 176994993 176999468 4475 True 1198.25 3450 95.41175 1 4712 4 chr1B.!!$R2 4711
3 TraesCS1D01G119300 chr1B 685083515 685084934 1419 True 543.50 774 86.52200 2612 3960 2 chr1B.!!$R3 1348
4 TraesCS1D01G119300 chr1B 43956984 43958430 1446 False 542.50 769 86.05400 2594 3964 2 chr1B.!!$F2 1370
5 TraesCS1D01G119300 chr6D 470142489 470143855 1366 True 2242.00 2242 96.10100 2577 3961 1 chr6D.!!$R2 1384
6 TraesCS1D01G119300 chr5D 450176579 450177701 1122 True 1930.00 1930 97.68500 2838 3960 1 chr5D.!!$R3 1122
7 TraesCS1D01G119300 chr3A 723648588 723649709 1121 False 772.50 1147 91.06900 2623 3962 2 chr3A.!!$F2 1339
8 TraesCS1D01G119300 chr3A 723602510 723603451 941 False 695.00 898 92.65700 2632 3767 2 chr3A.!!$F1 1135
9 TraesCS1D01G119300 chr7A 642524911 642530002 5091 True 745.00 826 88.60050 2708 3960 2 chr7A.!!$R1 1252
10 TraesCS1D01G119300 chr2A 426373508 426374262 754 False 815.00 815 86.18400 3204 3960 1 chr2A.!!$F1 756
11 TraesCS1D01G119300 chr5A 659502695 659503448 753 True 745.00 745 84.60500 3207 3960 1 chr5A.!!$R1 753
12 TraesCS1D01G119300 chr5B 522024617 522025362 745 False 721.00 721 84.19000 3207 3961 1 chr5B.!!$F1 754


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
148 149 1.967319 TCAAAGTCTTGGCTCCACAC 58.033 50.000 0.0 0.0 33.01 3.82 F
1678 1696 2.838736 TGGAGGATTATGCTTCTTCGC 58.161 47.619 0.0 0.0 0.00 4.70 F
2224 2242 1.501604 ACAGTTGGGTGGGGTACATTT 59.498 47.619 0.0 0.0 0.00 2.32 F
4039 8101 0.421904 AAGTACCCCCTCTGTCCCAT 59.578 55.000 0.0 0.0 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1826 1844 1.536940 TGTCTGATTGCACCACATGG 58.463 50.000 0.00 0.00 42.17 3.66 R
2495 2513 1.659601 CTCTGATGCAGTGCGAAAGAG 59.340 52.381 19.93 19.93 32.61 2.85 R
4092 8154 0.790993 AGAAGTACTCCCCTGTCCCA 59.209 55.000 0.00 0.00 0.00 4.37 R
5137 10797 0.033109 TCCCTCGAGATCCAAGAGCA 60.033 55.000 15.71 0.00 0.00 4.26 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 3.941483 AGCATTGCTACATGTTCTGGTAC 59.059 43.478 10.00 0.00 36.99 3.34
88 89 5.856156 TGCCAATTCATGACAAGAACATTT 58.144 33.333 0.00 0.00 0.00 2.32
148 149 1.967319 TCAAAGTCTTGGCTCCACAC 58.033 50.000 0.00 0.00 33.01 3.82
169 170 9.573133 CCACACTGAAAAATGTCCTTATATTTC 57.427 33.333 0.00 0.00 0.00 2.17
388 389 6.314899 AGAGGGACCTAATTTCACCTAAAG 57.685 41.667 0.00 0.00 0.00 1.85
502 503 3.560636 ACGGATTTAGTCCCATCCAAG 57.439 47.619 0.00 0.00 44.77 3.61
1162 1178 3.003275 TGCATTTTGGTCGAGTTCTTGTC 59.997 43.478 0.00 0.00 0.00 3.18
1192 1209 4.019950 TCTGCAATGAGGAATCACTCTGAA 60.020 41.667 0.00 0.00 38.32 3.02
1311 1329 3.568538 TCGTGGCGTCTAAGTTCTTTAC 58.431 45.455 0.00 0.00 0.00 2.01
1471 1489 8.080417 TCATTCTAACATACGCCAGAATACTAC 58.920 37.037 0.00 0.00 35.96 2.73
1605 1623 9.490379 AGTACCTAACTGTGTATGAAAGAAAAG 57.510 33.333 0.00 0.00 36.93 2.27
1678 1696 2.838736 TGGAGGATTATGCTTCTTCGC 58.161 47.619 0.00 0.00 0.00 4.70
1682 1700 4.096382 GGAGGATTATGCTTCTTCGCAAAA 59.904 41.667 0.00 0.00 44.06 2.44
1826 1844 6.149474 ACACTATGCCTACATTCTGTGTTTTC 59.851 38.462 0.00 0.00 42.29 2.29
1868 1886 6.371548 ACAACCTGTGCTACACTACATATTTG 59.628 38.462 0.00 0.00 35.11 2.32
2047 2065 7.439157 TGTAAGATTCAGAACATGGTGAAAG 57.561 36.000 10.37 0.00 36.31 2.62
2164 2182 7.231467 TGTTTTCCCAGAGAAACTAATTAGCT 58.769 34.615 12.54 1.69 44.20 3.32
2192 2210 5.412594 TGATTCAACTTCCTTCCTCATTTCG 59.587 40.000 0.00 0.00 0.00 3.46
2224 2242 1.501604 ACAGTTGGGTGGGGTACATTT 59.498 47.619 0.00 0.00 0.00 2.32
2282 2300 3.393800 CAGCACCTATCGTCATTAAGGG 58.606 50.000 0.00 0.00 33.16 3.95
2283 2301 2.143925 GCACCTATCGTCATTAAGGGC 58.856 52.381 0.00 0.00 33.16 5.19
2284 2302 2.767505 CACCTATCGTCATTAAGGGCC 58.232 52.381 0.00 0.00 33.16 5.80
2285 2303 2.368875 CACCTATCGTCATTAAGGGCCT 59.631 50.000 0.00 0.00 33.16 5.19
2286 2304 3.576982 CACCTATCGTCATTAAGGGCCTA 59.423 47.826 6.41 0.00 33.16 3.93
2287 2305 3.833070 ACCTATCGTCATTAAGGGCCTAG 59.167 47.826 6.41 0.00 33.16 3.02
2288 2306 3.833070 CCTATCGTCATTAAGGGCCTAGT 59.167 47.826 6.41 0.00 0.00 2.57
2289 2307 4.283722 CCTATCGTCATTAAGGGCCTAGTT 59.716 45.833 6.41 0.00 0.00 2.24
2290 2308 4.772886 ATCGTCATTAAGGGCCTAGTTT 57.227 40.909 6.41 0.00 0.00 2.66
2291 2309 3.869065 TCGTCATTAAGGGCCTAGTTTG 58.131 45.455 6.41 2.67 0.00 2.93
2292 2310 2.354821 CGTCATTAAGGGCCTAGTTTGC 59.645 50.000 6.41 0.00 0.00 3.68
2298 2316 2.275748 GGCCTAGTTTGCCCTCCC 59.724 66.667 0.00 0.00 43.33 4.30
2299 2317 2.275748 GCCTAGTTTGCCCTCCCC 59.724 66.667 0.00 0.00 0.00 4.81
2300 2318 3.007542 CCTAGTTTGCCCTCCCCC 58.992 66.667 0.00 0.00 0.00 5.40
2470 2488 6.698380 CAAGTGGTAGTAGTTACTGGTCATT 58.302 40.000 0.00 0.00 37.10 2.57
2495 2513 1.435408 GCAGCTTCGCCTGGATCTTC 61.435 60.000 0.00 0.00 33.44 2.87
2673 2694 3.009695 CCGATCTATCCTCTACTCCCACT 59.990 52.174 0.00 0.00 0.00 4.00
2851 2872 4.284550 GGTGGCTCCTGGTGGCAA 62.285 66.667 23.99 6.96 41.55 4.52
3034 3070 1.000506 GCGACCGGGCTCATATCTTTA 59.999 52.381 5.33 0.00 0.00 1.85
3205 3357 2.813474 CGGATCGCGGCAAGACAA 60.813 61.111 6.13 0.00 0.00 3.18
3290 3443 4.642437 TGCGAGTGATACTCTTCAAGATCT 59.358 41.667 7.31 0.00 42.92 2.75
3392 7416 2.483538 GTTTTCAAACCCAGCACATGCT 60.484 45.455 0.00 0.00 41.59 3.79
3415 7439 3.374058 GCTGCTAGAATTGCGGAAAAGTA 59.626 43.478 0.00 0.00 38.99 2.24
3518 7548 1.483415 GCCCTTGACGGTTATACCTGA 59.517 52.381 0.00 0.00 35.66 3.86
3783 7828 4.364860 GCTTCAGGGCGTTTTTCTTTTTA 58.635 39.130 0.00 0.00 0.00 1.52
3828 7873 6.763610 GGTCTTATATGACTTTGCTACTTGCT 59.236 38.462 15.98 0.00 38.53 3.91
3964 8025 8.589701 AATCCACCCTTTATCGAAAAAGTAAT 57.410 30.769 0.00 0.00 35.16 1.89
3965 8026 8.589701 ATCCACCCTTTATCGAAAAAGTAATT 57.410 30.769 0.00 0.00 35.16 1.40
3966 8027 8.411991 TCCACCCTTTATCGAAAAAGTAATTT 57.588 30.769 0.00 0.00 35.16 1.82
3967 8028 8.862085 TCCACCCTTTATCGAAAAAGTAATTTT 58.138 29.630 0.00 0.00 43.85 1.82
3968 8029 9.483916 CCACCCTTTATCGAAAAAGTAATTTTT 57.516 29.630 13.05 13.05 41.27 1.94
4013 8075 3.666374 GCAGCGAATCTCAGTTCAAGTTG 60.666 47.826 0.00 0.00 0.00 3.16
4021 8083 7.591057 CGAATCTCAGTTCAAGTTGCAAATTAA 59.409 33.333 12.36 0.00 0.00 1.40
4022 8084 8.807667 AATCTCAGTTCAAGTTGCAAATTAAG 57.192 30.769 12.36 1.05 0.00 1.85
4023 8085 7.333528 TCTCAGTTCAAGTTGCAAATTAAGT 57.666 32.000 12.36 7.41 0.00 2.24
4024 8086 8.445275 TCTCAGTTCAAGTTGCAAATTAAGTA 57.555 30.769 12.36 0.00 0.00 2.24
4025 8087 8.342634 TCTCAGTTCAAGTTGCAAATTAAGTAC 58.657 33.333 12.36 5.35 0.00 2.73
4026 8088 7.422399 TCAGTTCAAGTTGCAAATTAAGTACC 58.578 34.615 12.36 0.00 0.00 3.34
4027 8089 6.640907 CAGTTCAAGTTGCAAATTAAGTACCC 59.359 38.462 12.36 0.00 0.00 3.69
4028 8090 5.715434 TCAAGTTGCAAATTAAGTACCCC 57.285 39.130 12.36 0.00 0.00 4.95
4029 8091 4.525100 TCAAGTTGCAAATTAAGTACCCCC 59.475 41.667 12.36 0.00 0.00 5.40
4030 8092 4.397919 AGTTGCAAATTAAGTACCCCCT 57.602 40.909 0.00 0.00 0.00 4.79
4031 8093 4.341487 AGTTGCAAATTAAGTACCCCCTC 58.659 43.478 0.00 0.00 0.00 4.30
4032 8094 4.044191 AGTTGCAAATTAAGTACCCCCTCT 59.956 41.667 0.00 0.00 0.00 3.69
4033 8095 3.963129 TGCAAATTAAGTACCCCCTCTG 58.037 45.455 0.00 0.00 0.00 3.35
4034 8096 3.332485 TGCAAATTAAGTACCCCCTCTGT 59.668 43.478 0.00 0.00 0.00 3.41
4035 8097 3.945921 GCAAATTAAGTACCCCCTCTGTC 59.054 47.826 0.00 0.00 0.00 3.51
4036 8098 4.524053 CAAATTAAGTACCCCCTCTGTCC 58.476 47.826 0.00 0.00 0.00 4.02
4037 8099 2.259014 TTAAGTACCCCCTCTGTCCC 57.741 55.000 0.00 0.00 0.00 4.46
4038 8100 1.095130 TAAGTACCCCCTCTGTCCCA 58.905 55.000 0.00 0.00 0.00 4.37
4039 8101 0.421904 AAGTACCCCCTCTGTCCCAT 59.578 55.000 0.00 0.00 0.00 4.00
4040 8102 1.326055 AGTACCCCCTCTGTCCCATA 58.674 55.000 0.00 0.00 0.00 2.74
4041 8103 1.654997 AGTACCCCCTCTGTCCCATAA 59.345 52.381 0.00 0.00 0.00 1.90
4042 8104 2.252945 AGTACCCCCTCTGTCCCATAAT 59.747 50.000 0.00 0.00 0.00 1.28
4043 8105 3.473621 AGTACCCCCTCTGTCCCATAATA 59.526 47.826 0.00 0.00 0.00 0.98
4044 8106 3.674358 ACCCCCTCTGTCCCATAATAT 57.326 47.619 0.00 0.00 0.00 1.28
4045 8107 4.796185 ACCCCCTCTGTCCCATAATATA 57.204 45.455 0.00 0.00 0.00 0.86
4046 8108 5.114743 ACCCCCTCTGTCCCATAATATAA 57.885 43.478 0.00 0.00 0.00 0.98
4047 8109 5.101529 ACCCCCTCTGTCCCATAATATAAG 58.898 45.833 0.00 0.00 0.00 1.73
4048 8110 5.162648 ACCCCCTCTGTCCCATAATATAAGA 60.163 44.000 0.00 0.00 0.00 2.10
4049 8111 5.426833 CCCCCTCTGTCCCATAATATAAGAG 59.573 48.000 0.00 0.00 0.00 2.85
4050 8112 6.264528 CCCCTCTGTCCCATAATATAAGAGA 58.735 44.000 0.00 0.00 33.14 3.10
4051 8113 6.730977 CCCCTCTGTCCCATAATATAAGAGAA 59.269 42.308 0.00 0.00 33.14 2.87
4052 8114 7.404396 CCCCTCTGTCCCATAATATAAGAGAAT 59.596 40.741 0.00 0.00 33.14 2.40
4053 8115 8.830741 CCCTCTGTCCCATAATATAAGAGAATT 58.169 37.037 0.00 0.00 33.14 2.17
4081 8143 7.790861 AATAATAGTGCAGTGTTAAAAACGC 57.209 32.000 13.86 0.00 42.10 4.84
4095 8157 9.659830 GTGTTAAAAACGCTCTTATATTATGGG 57.340 33.333 0.00 0.00 38.81 4.00
4096 8158 9.616156 TGTTAAAAACGCTCTTATATTATGGGA 57.384 29.630 0.00 0.00 0.00 4.37
4097 8159 9.874215 GTTAAAAACGCTCTTATATTATGGGAC 57.126 33.333 0.00 0.00 0.00 4.46
4215 8277 1.516161 CTGTTGCTTCTGCTGCTACA 58.484 50.000 0.00 0.00 41.97 2.74
4348 8411 0.108804 GTTTCGCCTCGGTGAGATGA 60.109 55.000 0.00 0.00 35.94 2.92
4494 8559 7.482743 GTCATGTTTAGTGCTGTCATGTTTATG 59.517 37.037 0.00 0.00 37.64 1.90
4499 8564 3.053395 AGTGCTGTCATGTTTATGGGGAT 60.053 43.478 0.00 0.00 34.97 3.85
4582 8648 8.958119 ATACCAATATAAAAAGAGCGAGTTGA 57.042 30.769 0.00 0.00 0.00 3.18
4604 8670 3.054802 AGAAGATCCAACACATCTCACCC 60.055 47.826 0.00 0.00 29.82 4.61
4623 8689 2.339418 CCGTTTAACCGTGTCTATGCA 58.661 47.619 0.00 0.00 0.00 3.96
4629 8695 2.369870 CCGTGTCTATGCAACGGTC 58.630 57.895 16.92 0.00 38.94 4.79
4636 8702 3.181479 TGTCTATGCAACGGTCTATGTCC 60.181 47.826 0.00 0.00 0.00 4.02
4772 10424 8.221766 GCCTAATATACTAACGAGAAATGCAAC 58.778 37.037 0.00 0.00 0.00 4.17
4818 10478 8.673711 GTGTGCATTGATTACTAGTGGAAATAA 58.326 33.333 5.39 0.00 0.00 1.40
4822 10482 8.571336 GCATTGATTACTAGTGGAAATAAGCAT 58.429 33.333 5.39 0.00 0.00 3.79
4832 10492 7.338800 AGTGGAAATAAGCATGGAAATACTG 57.661 36.000 0.00 0.00 0.00 2.74
4833 10493 6.322201 AGTGGAAATAAGCATGGAAATACTGG 59.678 38.462 0.00 0.00 0.00 4.00
4834 10494 6.321181 GTGGAAATAAGCATGGAAATACTGGA 59.679 38.462 0.00 0.00 0.00 3.86
4835 10495 6.321181 TGGAAATAAGCATGGAAATACTGGAC 59.679 38.462 0.00 0.00 0.00 4.02
4836 10496 6.377327 AAATAAGCATGGAAATACTGGACG 57.623 37.500 0.00 0.00 0.00 4.79
4837 10497 2.332063 AGCATGGAAATACTGGACGG 57.668 50.000 0.00 0.00 0.00 4.79
4838 10498 1.134098 AGCATGGAAATACTGGACGGG 60.134 52.381 0.00 0.00 0.00 5.28
4839 10499 1.967319 CATGGAAATACTGGACGGGG 58.033 55.000 0.00 0.00 0.00 5.73
4840 10500 0.182775 ATGGAAATACTGGACGGGGC 59.817 55.000 0.00 0.00 0.00 5.80
4841 10501 1.202099 TGGAAATACTGGACGGGGCA 61.202 55.000 0.00 0.00 0.00 5.36
4842 10502 0.182775 GGAAATACTGGACGGGGCAT 59.817 55.000 0.00 0.00 0.00 4.40
4843 10503 1.409661 GGAAATACTGGACGGGGCATT 60.410 52.381 0.00 0.00 0.00 3.56
4844 10504 2.375146 GAAATACTGGACGGGGCATTT 58.625 47.619 0.00 0.00 0.00 2.32
4845 10505 2.525105 AATACTGGACGGGGCATTTT 57.475 45.000 0.00 0.00 0.00 1.82
4846 10506 1.762708 ATACTGGACGGGGCATTTTG 58.237 50.000 0.00 0.00 0.00 2.44
4847 10507 0.322997 TACTGGACGGGGCATTTTGG 60.323 55.000 0.00 0.00 0.00 3.28
4848 10508 1.606313 CTGGACGGGGCATTTTGGT 60.606 57.895 0.00 0.00 0.00 3.67
4849 10509 1.876497 CTGGACGGGGCATTTTGGTG 61.876 60.000 0.00 0.00 0.00 4.17
4850 10510 2.261361 GACGGGGCATTTTGGTGC 59.739 61.111 0.00 0.00 44.31 5.01
4856 10516 3.062639 GCATTTTGGTGCCAGGCT 58.937 55.556 14.15 0.00 39.18 4.58
4857 10517 1.079612 GCATTTTGGTGCCAGGCTC 60.080 57.895 14.15 9.31 39.18 4.70
4858 10518 1.818959 GCATTTTGGTGCCAGGCTCA 61.819 55.000 14.15 8.50 39.18 4.26
4859 10519 0.245539 CATTTTGGTGCCAGGCTCAG 59.754 55.000 14.15 0.00 0.00 3.35
4860 10520 1.538687 ATTTTGGTGCCAGGCTCAGC 61.539 55.000 14.15 3.18 0.00 4.26
4861 10521 2.645394 TTTTGGTGCCAGGCTCAGCT 62.645 55.000 14.15 0.00 33.48 4.24
4862 10522 1.778017 TTTGGTGCCAGGCTCAGCTA 61.778 55.000 14.15 0.00 33.48 3.32
4863 10523 2.124942 GGTGCCAGGCTCAGCTAC 60.125 66.667 14.15 0.18 0.00 3.58
4864 10524 2.665000 GTGCCAGGCTCAGCTACA 59.335 61.111 14.15 0.00 0.00 2.74
4865 10525 1.743252 GTGCCAGGCTCAGCTACAC 60.743 63.158 14.15 0.00 0.00 2.90
4866 10526 2.124942 GCCAGGCTCAGCTACACC 60.125 66.667 3.29 0.00 0.00 4.16
4867 10527 2.586792 CCAGGCTCAGCTACACCC 59.413 66.667 0.00 0.00 0.00 4.61
4868 10528 1.992277 CCAGGCTCAGCTACACCCT 60.992 63.158 0.00 0.00 0.00 4.34
4869 10529 0.687757 CCAGGCTCAGCTACACCCTA 60.688 60.000 0.00 0.00 0.00 3.53
4870 10530 1.195115 CAGGCTCAGCTACACCCTAA 58.805 55.000 0.00 0.00 0.00 2.69
4871 10531 1.555075 CAGGCTCAGCTACACCCTAAA 59.445 52.381 0.00 0.00 0.00 1.85
4872 10532 2.171448 CAGGCTCAGCTACACCCTAAAT 59.829 50.000 0.00 0.00 0.00 1.40
4873 10533 2.436173 AGGCTCAGCTACACCCTAAATC 59.564 50.000 0.00 0.00 0.00 2.17
4874 10534 2.485657 GGCTCAGCTACACCCTAAATCC 60.486 54.545 0.00 0.00 0.00 3.01
4875 10535 2.170607 GCTCAGCTACACCCTAAATCCA 59.829 50.000 0.00 0.00 0.00 3.41
4876 10536 3.742640 GCTCAGCTACACCCTAAATCCAG 60.743 52.174 0.00 0.00 0.00 3.86
4877 10537 3.706594 CTCAGCTACACCCTAAATCCAGA 59.293 47.826 0.00 0.00 0.00 3.86
4878 10538 4.298626 TCAGCTACACCCTAAATCCAGAT 58.701 43.478 0.00 0.00 0.00 2.90
4879 10539 4.345257 TCAGCTACACCCTAAATCCAGATC 59.655 45.833 0.00 0.00 0.00 2.75
4880 10540 3.322254 AGCTACACCCTAAATCCAGATCG 59.678 47.826 0.00 0.00 0.00 3.69
4881 10541 3.069729 GCTACACCCTAAATCCAGATCGT 59.930 47.826 0.00 0.00 0.00 3.73
4882 10542 3.821421 ACACCCTAAATCCAGATCGTC 57.179 47.619 0.00 0.00 0.00 4.20
4883 10543 2.434702 ACACCCTAAATCCAGATCGTCC 59.565 50.000 0.00 0.00 0.00 4.79
4884 10544 1.687123 ACCCTAAATCCAGATCGTCCG 59.313 52.381 0.00 0.00 0.00 4.79
4885 10545 1.687123 CCCTAAATCCAGATCGTCCGT 59.313 52.381 0.00 0.00 0.00 4.69
4886 10546 2.102588 CCCTAAATCCAGATCGTCCGTT 59.897 50.000 0.00 0.00 0.00 4.44
4887 10547 3.123804 CCTAAATCCAGATCGTCCGTTG 58.876 50.000 0.00 0.00 0.00 4.10
4888 10548 3.181479 CCTAAATCCAGATCGTCCGTTGA 60.181 47.826 0.00 0.00 0.00 3.18
4889 10549 2.586258 AATCCAGATCGTCCGTTGAG 57.414 50.000 0.00 0.00 0.00 3.02
4890 10550 0.103208 ATCCAGATCGTCCGTTGAGC 59.897 55.000 0.00 0.00 0.00 4.26
4891 10551 1.519455 CCAGATCGTCCGTTGAGCC 60.519 63.158 0.00 0.00 0.00 4.70
4892 10552 1.215382 CAGATCGTCCGTTGAGCCA 59.785 57.895 0.00 0.00 0.00 4.75
4893 10553 0.179100 CAGATCGTCCGTTGAGCCAT 60.179 55.000 0.00 0.00 0.00 4.40
4894 10554 0.537188 AGATCGTCCGTTGAGCCATT 59.463 50.000 0.00 0.00 0.00 3.16
4895 10555 0.652592 GATCGTCCGTTGAGCCATTG 59.347 55.000 0.00 0.00 0.00 2.82
4896 10556 0.744414 ATCGTCCGTTGAGCCATTGG 60.744 55.000 0.00 0.00 0.00 3.16
4897 10557 2.398554 CGTCCGTTGAGCCATTGGG 61.399 63.158 4.53 0.00 37.18 4.12
4898 10558 1.002624 GTCCGTTGAGCCATTGGGA 60.003 57.895 4.53 0.00 35.59 4.37
4899 10559 0.394352 GTCCGTTGAGCCATTGGGAT 60.394 55.000 4.53 0.00 35.59 3.85
4900 10560 0.394216 TCCGTTGAGCCATTGGGATG 60.394 55.000 4.53 0.00 35.59 3.51
4901 10561 1.434696 CGTTGAGCCATTGGGATGC 59.565 57.895 4.53 0.00 35.59 3.91
4902 10562 1.434696 GTTGAGCCATTGGGATGCG 59.565 57.895 4.53 0.00 35.59 4.73
4903 10563 1.031571 GTTGAGCCATTGGGATGCGA 61.032 55.000 4.53 0.00 35.59 5.10
4904 10564 0.749091 TTGAGCCATTGGGATGCGAG 60.749 55.000 4.53 0.00 35.59 5.03
4905 10565 1.146930 GAGCCATTGGGATGCGAGA 59.853 57.895 4.53 0.00 35.59 4.04
4906 10566 0.464373 GAGCCATTGGGATGCGAGAA 60.464 55.000 4.53 0.00 35.59 2.87
4907 10567 0.034186 AGCCATTGGGATGCGAGAAA 60.034 50.000 4.53 0.00 35.59 2.52
4908 10568 0.383231 GCCATTGGGATGCGAGAAAG 59.617 55.000 4.53 0.00 35.59 2.62
4909 10569 1.755179 CCATTGGGATGCGAGAAAGT 58.245 50.000 0.00 0.00 35.59 2.66
4910 10570 1.672881 CCATTGGGATGCGAGAAAGTC 59.327 52.381 0.00 0.00 35.59 3.01
4911 10571 1.672881 CATTGGGATGCGAGAAAGTCC 59.327 52.381 0.00 0.00 0.00 3.85
4912 10572 0.690192 TTGGGATGCGAGAAAGTCCA 59.310 50.000 0.00 0.00 32.31 4.02
4913 10573 0.250234 TGGGATGCGAGAAAGTCCAG 59.750 55.000 0.00 0.00 32.31 3.86
4914 10574 1.092345 GGGATGCGAGAAAGTCCAGC 61.092 60.000 0.00 0.00 32.31 4.85
4915 10575 0.107945 GGATGCGAGAAAGTCCAGCT 60.108 55.000 0.00 0.00 0.00 4.24
4916 10576 1.005340 GATGCGAGAAAGTCCAGCTG 58.995 55.000 6.78 6.78 0.00 4.24
4917 10577 0.392193 ATGCGAGAAAGTCCAGCTGG 60.392 55.000 27.87 27.87 0.00 4.85
4918 10578 1.004440 GCGAGAAAGTCCAGCTGGT 60.004 57.895 31.58 13.41 36.34 4.00
4919 10579 1.294659 GCGAGAAAGTCCAGCTGGTG 61.295 60.000 31.58 8.23 36.34 4.17
4920 10580 1.294659 CGAGAAAGTCCAGCTGGTGC 61.295 60.000 31.58 23.97 40.05 5.01
4921 10581 0.250467 GAGAAAGTCCAGCTGGTGCA 60.250 55.000 31.58 10.90 42.74 4.57
4922 10582 0.250640 AGAAAGTCCAGCTGGTGCAG 60.251 55.000 31.58 6.61 42.74 4.41
4932 10592 1.878775 CTGGTGCAGCAGTTTAGGC 59.121 57.895 32.68 0.00 0.00 3.93
4933 10593 1.589716 CTGGTGCAGCAGTTTAGGCC 61.590 60.000 32.68 6.73 0.00 5.19
4934 10594 2.343426 GGTGCAGCAGTTTAGGCCC 61.343 63.158 11.86 0.00 0.00 5.80
4935 10595 2.359850 TGCAGCAGTTTAGGCCCG 60.360 61.111 0.00 0.00 0.00 6.13
4936 10596 2.359975 GCAGCAGTTTAGGCCCGT 60.360 61.111 0.00 0.00 0.00 5.28
4937 10597 2.690778 GCAGCAGTTTAGGCCCGTG 61.691 63.158 0.00 0.00 0.00 4.94
4938 10598 2.040544 CAGCAGTTTAGGCCCGTGG 61.041 63.158 0.00 0.00 0.00 4.94
4939 10599 2.221299 AGCAGTTTAGGCCCGTGGA 61.221 57.895 0.00 0.00 0.00 4.02
4940 10600 1.302993 GCAGTTTAGGCCCGTGGAA 60.303 57.895 0.00 0.00 0.00 3.53
4941 10601 0.891904 GCAGTTTAGGCCCGTGGAAA 60.892 55.000 0.00 0.00 0.00 3.13
4942 10602 1.611519 CAGTTTAGGCCCGTGGAAAA 58.388 50.000 0.00 0.00 0.00 2.29
4943 10603 1.539827 CAGTTTAGGCCCGTGGAAAAG 59.460 52.381 0.00 0.00 0.00 2.27
4944 10604 0.885879 GTTTAGGCCCGTGGAAAAGG 59.114 55.000 0.00 0.00 0.00 3.11
4945 10605 0.772384 TTTAGGCCCGTGGAAAAGGA 59.228 50.000 0.00 0.00 0.00 3.36
4946 10606 0.772384 TTAGGCCCGTGGAAAAGGAA 59.228 50.000 0.00 0.00 0.00 3.36
4947 10607 0.326927 TAGGCCCGTGGAAAAGGAAG 59.673 55.000 0.00 0.00 0.00 3.46
4948 10608 1.074248 GGCCCGTGGAAAAGGAAGA 59.926 57.895 0.00 0.00 0.00 2.87
4949 10609 0.323451 GGCCCGTGGAAAAGGAAGAT 60.323 55.000 0.00 0.00 0.00 2.40
4950 10610 1.064979 GGCCCGTGGAAAAGGAAGATA 60.065 52.381 0.00 0.00 0.00 1.98
4951 10611 2.014857 GCCCGTGGAAAAGGAAGATAC 58.985 52.381 0.00 0.00 0.00 2.24
4952 10612 2.277084 CCCGTGGAAAAGGAAGATACG 58.723 52.381 0.00 0.00 0.00 3.06
4953 10613 2.277084 CCGTGGAAAAGGAAGATACGG 58.723 52.381 0.00 0.00 42.70 4.02
4954 10614 2.354403 CCGTGGAAAAGGAAGATACGGT 60.354 50.000 0.00 0.00 43.17 4.83
4955 10615 3.119029 CCGTGGAAAAGGAAGATACGGTA 60.119 47.826 0.00 0.00 43.17 4.02
4956 10616 4.110482 CGTGGAAAAGGAAGATACGGTAG 58.890 47.826 0.00 0.00 0.00 3.18
4957 10617 3.869832 GTGGAAAAGGAAGATACGGTAGC 59.130 47.826 0.00 0.00 0.00 3.58
4958 10618 3.121544 GGAAAAGGAAGATACGGTAGCG 58.878 50.000 13.69 13.69 0.00 4.26
4959 10619 3.181483 GGAAAAGGAAGATACGGTAGCGA 60.181 47.826 22.88 5.08 0.00 4.93
4960 10620 4.427312 GAAAAGGAAGATACGGTAGCGAA 58.573 43.478 22.88 0.00 0.00 4.70
4961 10621 4.667519 AAAGGAAGATACGGTAGCGAAT 57.332 40.909 22.88 1.40 0.00 3.34
4962 10622 5.779529 AAAGGAAGATACGGTAGCGAATA 57.220 39.130 22.88 4.03 0.00 1.75
4963 10623 4.762956 AGGAAGATACGGTAGCGAATAC 57.237 45.455 22.88 9.10 0.00 1.89
4964 10624 3.188048 AGGAAGATACGGTAGCGAATACG 59.812 47.826 22.88 0.00 42.93 3.06
4965 10625 3.058639 GGAAGATACGGTAGCGAATACGT 60.059 47.826 22.88 7.42 41.98 3.57
4966 10626 3.532892 AGATACGGTAGCGAATACGTG 57.467 47.619 22.88 0.00 41.98 4.49
4967 10627 2.225019 AGATACGGTAGCGAATACGTGG 59.775 50.000 22.88 0.00 41.98 4.94
4968 10628 1.378531 TACGGTAGCGAATACGTGGT 58.621 50.000 22.88 0.00 41.98 4.16
4969 10629 0.179156 ACGGTAGCGAATACGTGGTG 60.179 55.000 22.88 0.00 41.98 4.17
4970 10630 1.477030 CGGTAGCGAATACGTGGTGC 61.477 60.000 9.07 0.00 41.98 5.01
4971 10631 0.458889 GGTAGCGAATACGTGGTGCA 60.459 55.000 0.00 0.00 41.98 4.57
4972 10632 0.643820 GTAGCGAATACGTGGTGCAC 59.356 55.000 8.80 8.80 41.98 4.57
4973 10633 0.244178 TAGCGAATACGTGGTGCACA 59.756 50.000 20.43 1.62 41.98 4.57
4974 10634 1.014044 AGCGAATACGTGGTGCACAG 61.014 55.000 20.43 11.75 41.98 3.66
4975 10635 1.289109 GCGAATACGTGGTGCACAGT 61.289 55.000 20.43 16.96 41.98 3.55
4976 10636 0.438445 CGAATACGTGGTGCACAGTG 59.562 55.000 20.43 9.52 33.40 3.66
4977 10637 1.508632 GAATACGTGGTGCACAGTGT 58.491 50.000 20.43 15.01 33.40 3.55
4978 10638 1.459592 GAATACGTGGTGCACAGTGTC 59.540 52.381 20.43 12.55 33.40 3.67
4979 10639 0.666274 ATACGTGGTGCACAGTGTCG 60.666 55.000 20.43 16.17 33.40 4.35
4980 10640 2.007113 TACGTGGTGCACAGTGTCGT 62.007 55.000 20.43 20.44 33.40 4.34
4981 10641 1.299544 CGTGGTGCACAGTGTCGTA 60.300 57.895 20.43 0.00 33.40 3.43
4982 10642 0.666274 CGTGGTGCACAGTGTCGTAT 60.666 55.000 20.43 0.00 33.40 3.06
4983 10643 0.790207 GTGGTGCACAGTGTCGTATG 59.210 55.000 20.43 0.00 34.08 2.39
4984 10644 0.391228 TGGTGCACAGTGTCGTATGT 59.609 50.000 20.43 0.00 0.00 2.29
4986 10646 0.790207 GTGCACAGTGTCGTATGTGG 59.210 55.000 13.17 0.00 45.52 4.17
4987 10647 0.320334 TGCACAGTGTCGTATGTGGG 60.320 55.000 1.61 0.00 45.52 4.61
4988 10648 1.635663 GCACAGTGTCGTATGTGGGC 61.636 60.000 1.61 2.64 45.52 5.36
4989 10649 1.019278 CACAGTGTCGTATGTGGGCC 61.019 60.000 0.00 0.00 42.46 5.80
4990 10650 1.192146 ACAGTGTCGTATGTGGGCCT 61.192 55.000 4.53 0.00 0.00 5.19
4991 10651 0.036388 CAGTGTCGTATGTGGGCCTT 60.036 55.000 4.53 0.00 0.00 4.35
4992 10652 0.690762 AGTGTCGTATGTGGGCCTTT 59.309 50.000 4.53 0.00 0.00 3.11
4993 10653 1.073284 AGTGTCGTATGTGGGCCTTTT 59.927 47.619 4.53 0.00 0.00 2.27
4994 10654 1.467342 GTGTCGTATGTGGGCCTTTTC 59.533 52.381 4.53 0.00 0.00 2.29
4995 10655 0.725117 GTCGTATGTGGGCCTTTTCG 59.275 55.000 4.53 3.76 0.00 3.46
4996 10656 0.391927 TCGTATGTGGGCCTTTTCGG 60.392 55.000 4.53 0.00 0.00 4.30
4997 10657 0.675522 CGTATGTGGGCCTTTTCGGT 60.676 55.000 4.53 0.00 34.25 4.69
4998 10658 1.405797 CGTATGTGGGCCTTTTCGGTA 60.406 52.381 4.53 0.00 34.25 4.02
4999 10659 2.743838 CGTATGTGGGCCTTTTCGGTAT 60.744 50.000 4.53 0.00 34.25 2.73
5000 10660 1.762708 ATGTGGGCCTTTTCGGTATG 58.237 50.000 4.53 0.00 34.25 2.39
5001 10661 0.322997 TGTGGGCCTTTTCGGTATGG 60.323 55.000 4.53 0.00 34.25 2.74
5002 10662 1.035385 GTGGGCCTTTTCGGTATGGG 61.035 60.000 4.53 0.00 34.25 4.00
5003 10663 2.125326 GGGCCTTTTCGGTATGGGC 61.125 63.158 0.84 0.00 43.32 5.36
5004 10664 2.478033 GGCCTTTTCGGTATGGGCG 61.478 63.158 0.00 0.00 43.27 6.13
5005 10665 1.747745 GCCTTTTCGGTATGGGCGT 60.748 57.895 0.00 0.00 33.30 5.68
5006 10666 1.712018 GCCTTTTCGGTATGGGCGTC 61.712 60.000 0.00 0.00 33.30 5.19
5007 10667 1.093496 CCTTTTCGGTATGGGCGTCC 61.093 60.000 0.00 0.00 0.00 4.79
5008 10668 1.426041 CTTTTCGGTATGGGCGTCCG 61.426 60.000 0.00 0.00 44.76 4.79
5009 10669 2.169937 TTTTCGGTATGGGCGTCCGT 62.170 55.000 5.84 5.84 43.94 4.69
5010 10670 2.561549 TTTCGGTATGGGCGTCCGTC 62.562 60.000 2.67 0.00 43.94 4.79
5011 10671 4.918129 CGGTATGGGCGTCCGTCG 62.918 72.222 2.67 0.00 39.51 5.12
5012 10672 3.830192 GGTATGGGCGTCCGTCGT 61.830 66.667 2.67 0.00 42.13 4.34
5013 10673 2.278401 GTATGGGCGTCCGTCGTC 60.278 66.667 2.67 0.00 44.07 4.20
5014 10674 3.879682 TATGGGCGTCCGTCGTCG 61.880 66.667 2.67 0.00 45.92 5.12
5043 10703 4.057428 GCGGACGGCTCTGTCACT 62.057 66.667 10.63 0.00 40.72 3.41
5044 10704 2.126307 CGGACGGCTCTGTCACTG 60.126 66.667 10.63 0.00 40.72 3.66
5045 10705 2.262915 GGACGGCTCTGTCACTGG 59.737 66.667 10.63 0.00 40.72 4.00
5046 10706 2.262915 GACGGCTCTGTCACTGGG 59.737 66.667 4.09 0.00 38.75 4.45
5047 10707 2.203640 ACGGCTCTGTCACTGGGA 60.204 61.111 0.00 0.00 0.00 4.37
5048 10708 1.608717 GACGGCTCTGTCACTGGGAT 61.609 60.000 4.09 0.00 38.75 3.85
5049 10709 1.153489 CGGCTCTGTCACTGGGATG 60.153 63.158 0.00 0.00 0.00 3.51
5050 10710 1.222936 GGCTCTGTCACTGGGATGG 59.777 63.158 0.00 0.00 0.00 3.51
5051 10711 1.222936 GCTCTGTCACTGGGATGGG 59.777 63.158 0.00 0.00 0.00 4.00
5052 10712 1.222936 CTCTGTCACTGGGATGGGC 59.777 63.158 0.00 0.00 0.00 5.36
5053 10713 1.538629 TCTGTCACTGGGATGGGCA 60.539 57.895 0.00 0.00 0.00 5.36
5054 10714 1.077930 CTGTCACTGGGATGGGCAG 60.078 63.158 0.00 0.00 0.00 4.85
5055 10715 1.845627 CTGTCACTGGGATGGGCAGT 61.846 60.000 0.00 0.00 0.00 4.40
5056 10716 1.377725 GTCACTGGGATGGGCAGTG 60.378 63.158 0.00 0.00 45.40 3.66
5057 10717 2.753043 CACTGGGATGGGCAGTGC 60.753 66.667 6.55 6.55 39.61 4.40
5078 10738 1.287815 TGGCACAGGTCGTTAGTCG 59.712 57.895 0.00 0.00 41.41 4.18
5079 10739 1.174078 TGGCACAGGTCGTTAGTCGA 61.174 55.000 0.00 0.00 46.83 4.20
5086 10746 3.494378 TCGTTAGTCGAGGGAGCG 58.506 61.111 0.00 0.00 44.01 5.03
5087 10747 1.376424 TCGTTAGTCGAGGGAGCGT 60.376 57.895 0.00 0.00 44.01 5.07
5088 10748 1.226323 CGTTAGTCGAGGGAGCGTG 60.226 63.158 0.00 0.00 42.86 5.34
5089 10749 1.139095 GTTAGTCGAGGGAGCGTGG 59.861 63.158 0.00 0.00 0.00 4.94
5090 10750 1.001764 TTAGTCGAGGGAGCGTGGA 60.002 57.895 0.00 0.00 0.00 4.02
5091 10751 0.609957 TTAGTCGAGGGAGCGTGGAA 60.610 55.000 0.00 0.00 0.00 3.53
5092 10752 0.609957 TAGTCGAGGGAGCGTGGAAA 60.610 55.000 0.00 0.00 0.00 3.13
5093 10753 1.218316 GTCGAGGGAGCGTGGAAAT 59.782 57.895 0.00 0.00 0.00 2.17
5094 10754 0.806492 GTCGAGGGAGCGTGGAAATC 60.806 60.000 0.00 0.00 0.00 2.17
5095 10755 1.521681 CGAGGGAGCGTGGAAATCC 60.522 63.158 0.00 0.00 0.00 3.01
5096 10756 1.602237 GAGGGAGCGTGGAAATCCA 59.398 57.895 0.00 0.00 45.30 3.41
5105 10765 2.371784 TGGAAATCCAGAGCCGTCA 58.628 52.632 0.00 0.00 42.01 4.35
5106 10766 0.911769 TGGAAATCCAGAGCCGTCAT 59.088 50.000 0.00 0.00 42.01 3.06
5107 10767 1.134401 TGGAAATCCAGAGCCGTCATC 60.134 52.381 0.00 0.00 42.01 2.92
5108 10768 1.587547 GAAATCCAGAGCCGTCATCC 58.412 55.000 0.00 0.00 0.00 3.51
5109 10769 0.181350 AAATCCAGAGCCGTCATCCC 59.819 55.000 0.00 0.00 0.00 3.85
5110 10770 0.982852 AATCCAGAGCCGTCATCCCA 60.983 55.000 0.00 0.00 0.00 4.37
5111 10771 0.765903 ATCCAGAGCCGTCATCCCAT 60.766 55.000 0.00 0.00 0.00 4.00
5112 10772 1.070445 CCAGAGCCGTCATCCCATC 59.930 63.158 0.00 0.00 0.00 3.51
5113 10773 1.300465 CAGAGCCGTCATCCCATCG 60.300 63.158 0.00 0.00 0.00 3.84
5114 10774 2.029666 GAGCCGTCATCCCATCGG 59.970 66.667 0.00 0.00 45.94 4.18
5117 10777 2.505982 CCGTCATCCCATCGGCTT 59.494 61.111 0.00 0.00 37.90 4.35
5118 10778 1.889105 CCGTCATCCCATCGGCTTG 60.889 63.158 0.00 0.00 37.90 4.01
5119 10779 1.889105 CGTCATCCCATCGGCTTGG 60.889 63.158 0.00 0.00 36.46 3.61
5131 10791 4.133796 GCTTGGGCCCGTCATTGC 62.134 66.667 19.37 10.86 0.00 3.56
5132 10792 2.676121 CTTGGGCCCGTCATTGCA 60.676 61.111 19.37 0.00 0.00 4.08
5133 10793 2.676121 TTGGGCCCGTCATTGCAG 60.676 61.111 19.37 0.00 0.00 4.41
5134 10794 4.738998 TGGGCCCGTCATTGCAGG 62.739 66.667 19.37 0.00 0.00 4.85
5136 10796 4.740822 GGCCCGTCATTGCAGGGT 62.741 66.667 9.55 0.00 46.69 4.34
5137 10797 2.676471 GCCCGTCATTGCAGGGTT 60.676 61.111 9.55 0.00 46.69 4.11
5138 10798 2.993471 GCCCGTCATTGCAGGGTTG 61.993 63.158 9.55 0.00 46.69 3.77
5147 10807 4.751431 GCAGGGTTGCTCTTGGAT 57.249 55.556 0.00 0.00 46.95 3.41
5148 10808 2.486796 GCAGGGTTGCTCTTGGATC 58.513 57.895 0.00 0.00 46.95 3.36
5149 10809 0.034670 GCAGGGTTGCTCTTGGATCT 60.035 55.000 0.00 0.00 46.95 2.75
5150 10810 2.016096 GCAGGGTTGCTCTTGGATCTC 61.016 57.143 0.00 0.00 46.95 2.75
5151 10811 0.539051 AGGGTTGCTCTTGGATCTCG 59.461 55.000 0.00 0.00 0.00 4.04
5152 10812 0.537188 GGGTTGCTCTTGGATCTCGA 59.463 55.000 0.00 0.00 0.00 4.04
5153 10813 1.472376 GGGTTGCTCTTGGATCTCGAG 60.472 57.143 5.93 5.93 0.00 4.04
5154 10814 1.472376 GGTTGCTCTTGGATCTCGAGG 60.472 57.143 13.56 0.00 0.00 4.63
5155 10815 0.826715 TTGCTCTTGGATCTCGAGGG 59.173 55.000 13.56 0.00 0.00 4.30
5156 10816 0.033109 TGCTCTTGGATCTCGAGGGA 60.033 55.000 13.56 0.00 28.16 4.20
5157 10817 1.115467 GCTCTTGGATCTCGAGGGAA 58.885 55.000 13.56 0.00 28.16 3.97
5158 10818 1.202475 GCTCTTGGATCTCGAGGGAAC 60.202 57.143 13.56 1.54 28.16 3.62
5159 10819 1.066303 CTCTTGGATCTCGAGGGAACG 59.934 57.143 13.56 0.00 28.16 3.95
5160 10820 1.103803 CTTGGATCTCGAGGGAACGA 58.896 55.000 13.56 0.18 40.00 3.85
5166 10826 4.728110 TCGAGGGAACGAGGGCGA 62.728 66.667 0.00 0.00 41.64 5.54
5167 10827 4.493747 CGAGGGAACGAGGGCGAC 62.494 72.222 0.00 0.00 41.64 5.19
5168 10828 4.493747 GAGGGAACGAGGGCGACG 62.494 72.222 0.00 0.00 41.64 5.12
5170 10830 4.790861 GGGAACGAGGGCGACGTC 62.791 72.222 5.18 5.18 43.16 4.34
5176 10836 4.176851 GAGGGCGACGTCGAGGAC 62.177 72.222 39.74 24.31 43.02 3.85
5201 10861 4.864334 GGCGTGGCAGGATGGAGG 62.864 72.222 12.03 0.00 35.86 4.30
5202 10862 3.785859 GCGTGGCAGGATGGAGGA 61.786 66.667 12.03 0.00 35.86 3.71
5203 10863 2.503061 CGTGGCAGGATGGAGGAG 59.497 66.667 0.00 0.00 35.86 3.69
5204 10864 2.060383 CGTGGCAGGATGGAGGAGA 61.060 63.158 0.00 0.00 35.86 3.71
5205 10865 1.617018 CGTGGCAGGATGGAGGAGAA 61.617 60.000 0.00 0.00 35.86 2.87
5206 10866 0.107459 GTGGCAGGATGGAGGAGAAC 60.107 60.000 0.00 0.00 35.86 3.01
5207 10867 1.144936 GGCAGGATGGAGGAGAACG 59.855 63.158 0.00 0.00 35.86 3.95
5208 10868 1.144936 GCAGGATGGAGGAGAACGG 59.855 63.158 0.00 0.00 35.86 4.44
5209 10869 1.144936 CAGGATGGAGGAGAACGGC 59.855 63.158 0.00 0.00 0.00 5.68
5210 10870 1.002274 AGGATGGAGGAGAACGGCT 59.998 57.895 0.00 0.00 0.00 5.52
5211 10871 0.618968 AGGATGGAGGAGAACGGCTT 60.619 55.000 0.00 0.00 0.00 4.35
5212 10872 0.462759 GGATGGAGGAGAACGGCTTG 60.463 60.000 0.00 0.00 0.00 4.01
5213 10873 0.462759 GATGGAGGAGAACGGCTTGG 60.463 60.000 0.00 0.00 0.00 3.61
5214 10874 0.909610 ATGGAGGAGAACGGCTTGGA 60.910 55.000 0.00 0.00 0.00 3.53
5215 10875 1.219393 GGAGGAGAACGGCTTGGAG 59.781 63.158 0.00 0.00 0.00 3.86
5216 10876 1.545706 GGAGGAGAACGGCTTGGAGT 61.546 60.000 0.00 0.00 0.00 3.85
5217 10877 0.321996 GAGGAGAACGGCTTGGAGTT 59.678 55.000 0.00 0.00 0.00 3.01
5218 10878 0.765510 AGGAGAACGGCTTGGAGTTT 59.234 50.000 0.00 0.00 0.00 2.66
5219 10879 0.875059 GGAGAACGGCTTGGAGTTTG 59.125 55.000 0.00 0.00 0.00 2.93
5220 10880 1.594331 GAGAACGGCTTGGAGTTTGT 58.406 50.000 0.00 0.00 0.00 2.83
5221 10881 1.264288 GAGAACGGCTTGGAGTTTGTG 59.736 52.381 0.00 0.00 0.00 3.33
5222 10882 0.317854 GAACGGCTTGGAGTTTGTGC 60.318 55.000 0.00 0.00 0.00 4.57
5223 10883 0.751643 AACGGCTTGGAGTTTGTGCT 60.752 50.000 0.00 0.00 0.00 4.40
5224 10884 1.166531 ACGGCTTGGAGTTTGTGCTC 61.167 55.000 0.00 0.00 34.89 4.26
5225 10885 1.576421 GGCTTGGAGTTTGTGCTCG 59.424 57.895 0.00 0.00 36.41 5.03
5226 10886 0.884704 GGCTTGGAGTTTGTGCTCGA 60.885 55.000 0.00 0.00 36.41 4.04
5227 10887 1.160137 GCTTGGAGTTTGTGCTCGAT 58.840 50.000 0.00 0.00 36.41 3.59
5228 10888 1.129437 GCTTGGAGTTTGTGCTCGATC 59.871 52.381 0.00 0.00 36.41 3.69
5229 10889 2.693069 CTTGGAGTTTGTGCTCGATCT 58.307 47.619 0.00 0.00 36.41 2.75
5230 10890 2.084610 TGGAGTTTGTGCTCGATCTG 57.915 50.000 0.00 0.00 36.41 2.90
5231 10891 1.338105 TGGAGTTTGTGCTCGATCTGG 60.338 52.381 0.00 0.00 36.41 3.86
5232 10892 1.338200 GGAGTTTGTGCTCGATCTGGT 60.338 52.381 0.00 0.00 36.41 4.00
5233 10893 1.728971 GAGTTTGTGCTCGATCTGGTG 59.271 52.381 0.00 0.00 0.00 4.17
5234 10894 0.798776 GTTTGTGCTCGATCTGGTGG 59.201 55.000 0.00 0.00 0.00 4.61
5235 10895 0.396435 TTTGTGCTCGATCTGGTGGT 59.604 50.000 0.00 0.00 0.00 4.16
5236 10896 0.037326 TTGTGCTCGATCTGGTGGTC 60.037 55.000 0.00 0.00 0.00 4.02
5237 10897 1.184970 TGTGCTCGATCTGGTGGTCA 61.185 55.000 0.00 0.00 0.00 4.02
5238 10898 0.459237 GTGCTCGATCTGGTGGTCAG 60.459 60.000 0.00 0.00 44.68 3.51
5239 10899 1.142748 GCTCGATCTGGTGGTCAGG 59.857 63.158 0.00 0.00 43.53 3.86
5240 10900 1.608717 GCTCGATCTGGTGGTCAGGT 61.609 60.000 0.00 0.00 43.53 4.00
5241 10901 1.763968 CTCGATCTGGTGGTCAGGTA 58.236 55.000 0.00 0.00 43.53 3.08
5242 10902 2.100197 CTCGATCTGGTGGTCAGGTAA 58.900 52.381 0.00 0.00 43.53 2.85
5243 10903 2.099921 CTCGATCTGGTGGTCAGGTAAG 59.900 54.545 0.00 0.00 43.53 2.34
5244 10904 2.100197 CGATCTGGTGGTCAGGTAAGA 58.900 52.381 0.00 0.00 43.53 2.10
5245 10905 2.695666 CGATCTGGTGGTCAGGTAAGAT 59.304 50.000 0.00 0.00 43.53 2.40
5246 10906 3.243569 CGATCTGGTGGTCAGGTAAGATC 60.244 52.174 0.00 0.00 43.53 2.75
5247 10907 3.474798 TCTGGTGGTCAGGTAAGATCT 57.525 47.619 0.00 0.00 43.53 2.75
5248 10908 3.791320 TCTGGTGGTCAGGTAAGATCTT 58.209 45.455 13.56 13.56 43.53 2.40
5249 10909 4.168101 TCTGGTGGTCAGGTAAGATCTTT 58.832 43.478 14.36 0.00 43.53 2.52
5250 10910 4.597507 TCTGGTGGTCAGGTAAGATCTTTT 59.402 41.667 14.36 0.00 43.53 2.27
5251 10911 5.073144 TCTGGTGGTCAGGTAAGATCTTTTT 59.927 40.000 14.36 0.00 43.53 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 6.655003 TGTGTGAAGTTCAGATTTCCTATTCC 59.345 38.462 5.62 0.00 0.00 3.01
88 89 7.636579 AGGCATATCATCCTTAATTATGCAGA 58.363 34.615 13.36 0.00 40.16 4.26
108 109 9.976511 CTTTGATATTTATCATGTCAAAGGCAT 57.023 29.630 18.96 5.84 45.36 4.40
217 218 6.795590 TGACAATGAAGGGGAATAAAGGTAA 58.204 36.000 0.00 0.00 0.00 2.85
268 269 9.796180 TCATTATTCATGACAACATCATCCATA 57.204 29.630 0.00 0.00 45.52 2.74
306 307 5.125578 GGGACCAGACTTGATTTTATCAACC 59.874 44.000 0.00 0.00 43.84 3.77
388 389 9.991906 ATGGATGAAATTGATTACCATTGAATC 57.008 29.630 0.00 0.00 33.67 2.52
407 408 1.558294 ACTGAGCTTGCAGATGGATGA 59.442 47.619 9.28 0.00 39.20 2.92
502 503 9.761504 GGGATAACTAGACAGGTTAAATCTTAC 57.238 37.037 0.00 0.00 33.67 2.34
611 612 8.762645 TGTATTTCTAGATCCTTGAATCAGTGT 58.237 33.333 0.00 0.00 0.00 3.55
1162 1178 5.050499 GTGATTCCTCATTGCAGAATACTCG 60.050 44.000 0.00 0.00 32.98 4.18
1192 1209 5.869649 ACACCTTAAGGCAAGTTCAAAAT 57.130 34.783 21.92 0.00 39.32 1.82
1311 1329 5.163343 TGGATCGGAGGGAGTACTATTTTTG 60.163 44.000 0.00 0.00 0.00 2.44
1440 1458 3.057019 GGCGTATGTTAGAATGATCGCA 58.943 45.455 0.00 0.00 43.31 5.10
1471 1489 6.653273 AGAATGATCGTGTGACACATAAAG 57.347 37.500 16.74 4.46 33.40 1.85
1605 1623 5.013599 AGAGGCCCTAAATCATACTGATTCC 59.986 44.000 0.00 0.82 45.57 3.01
1717 1735 4.706035 TCCTTTGAAATTGCATGCAAAGT 58.294 34.783 34.84 25.15 43.33 2.66
1826 1844 1.536940 TGTCTGATTGCACCACATGG 58.463 50.000 0.00 0.00 42.17 3.66
1868 1886 8.627487 TGAATTCACATGAACTAAAAACACAC 57.373 30.769 3.38 0.00 36.80 3.82
2024 2042 7.173218 TCACTTTCACCATGTTCTGAATCTTAC 59.827 37.037 0.00 0.00 0.00 2.34
2027 2045 5.624159 TCACTTTCACCATGTTCTGAATCT 58.376 37.500 0.00 0.00 0.00 2.40
2047 2065 2.094762 AGACTTTGTACCCGCATCAC 57.905 50.000 0.00 0.00 0.00 3.06
2164 2182 5.879763 TGAGGAAGGAAGTTGAATCATGAA 58.120 37.500 0.00 0.00 0.00 2.57
2224 2242 2.268076 GCTTTGCCGGCAAGGAAGA 61.268 57.895 44.45 28.56 45.00 2.87
2282 2300 2.275748 GGGGAGGGCAAACTAGGC 59.724 66.667 0.00 0.00 0.00 3.93
2283 2301 3.007542 GGGGGAGGGCAAACTAGG 58.992 66.667 0.00 0.00 0.00 3.02
2298 2316 2.774351 CTGGGGCCTTCTAGGGGG 60.774 72.222 0.84 2.04 35.37 5.40
2299 2317 1.214992 AAACTGGGGCCTTCTAGGGG 61.215 60.000 0.84 0.00 35.37 4.79
2300 2318 0.034089 CAAACTGGGGCCTTCTAGGG 60.034 60.000 0.84 0.00 35.37 3.53
2301 2319 0.034089 CCAAACTGGGGCCTTCTAGG 60.034 60.000 0.84 0.00 34.04 3.02
2302 2320 0.698818 ACCAAACTGGGGCCTTCTAG 59.301 55.000 0.84 0.00 43.37 2.43
2303 2321 0.404040 CACCAAACTGGGGCCTTCTA 59.596 55.000 0.84 0.00 43.37 2.10
2304 2322 1.153756 CACCAAACTGGGGCCTTCT 59.846 57.895 0.84 0.00 43.37 2.85
2305 2323 0.895559 CTCACCAAACTGGGGCCTTC 60.896 60.000 0.84 0.00 41.90 3.46
2306 2324 1.153756 CTCACCAAACTGGGGCCTT 59.846 57.895 0.84 0.00 41.90 4.35
2307 2325 2.845345 CCTCACCAAACTGGGGCCT 61.845 63.158 0.84 0.00 41.90 5.19
2308 2326 2.283173 CCTCACCAAACTGGGGCC 60.283 66.667 0.00 0.00 41.90 5.80
2309 2327 2.283173 CCCTCACCAAACTGGGGC 60.283 66.667 0.00 0.00 41.90 5.80
2495 2513 1.659601 CTCTGATGCAGTGCGAAAGAG 59.340 52.381 19.93 19.93 32.61 2.85
2851 2872 3.953775 CACAGAACCGGGCCACCT 61.954 66.667 6.32 0.00 33.28 4.00
3034 3070 2.187946 GCCCTACATGCGACAGCT 59.812 61.111 0.00 0.00 45.42 4.24
3392 7416 1.819928 TTTCCGCAATTCTAGCAGCA 58.180 45.000 0.00 0.00 0.00 4.41
3415 7439 4.005650 CTCAAGCATGTGTTGTATCCACT 58.994 43.478 9.06 0.00 33.92 4.00
3783 7828 2.555199 CAAAGCTATGCCTAAGCGAGT 58.445 47.619 0.00 0.00 44.87 4.18
3828 7873 1.153745 GCACACACAAAAACCGCCA 60.154 52.632 0.00 0.00 0.00 5.69
3984 8045 5.355071 TGAACTGAGATTCGCTGCATAATTT 59.645 36.000 0.00 0.00 0.00 1.82
4013 8075 3.945921 GACAGAGGGGGTACTTAATTTGC 59.054 47.826 0.00 0.00 0.00 3.68
4021 8083 3.629022 TGGGACAGAGGGGGTACT 58.371 61.111 0.00 0.00 0.00 2.73
4055 8117 9.332301 GCGTTTTTAACACTGCACTATTATTAA 57.668 29.630 0.00 0.00 0.00 1.40
4056 8118 8.723311 AGCGTTTTTAACACTGCACTATTATTA 58.277 29.630 0.00 0.00 0.00 0.98
4057 8119 7.590279 AGCGTTTTTAACACTGCACTATTATT 58.410 30.769 0.00 0.00 0.00 1.40
4058 8120 7.119262 AGAGCGTTTTTAACACTGCACTATTAT 59.881 33.333 0.00 0.00 0.00 1.28
4059 8121 6.425721 AGAGCGTTTTTAACACTGCACTATTA 59.574 34.615 0.00 0.00 0.00 0.98
4060 8122 5.238650 AGAGCGTTTTTAACACTGCACTATT 59.761 36.000 0.00 0.00 0.00 1.73
4061 8123 4.755123 AGAGCGTTTTTAACACTGCACTAT 59.245 37.500 0.00 0.00 0.00 2.12
4062 8124 4.124238 AGAGCGTTTTTAACACTGCACTA 58.876 39.130 0.00 0.00 0.00 2.74
4063 8125 2.943033 AGAGCGTTTTTAACACTGCACT 59.057 40.909 0.00 0.00 0.00 4.40
4064 8126 3.334272 AGAGCGTTTTTAACACTGCAC 57.666 42.857 0.00 0.00 0.00 4.57
4065 8127 5.682943 ATAAGAGCGTTTTTAACACTGCA 57.317 34.783 0.00 0.00 0.00 4.41
4066 8128 9.931210 ATAATATAAGAGCGTTTTTAACACTGC 57.069 29.630 0.00 0.00 0.00 4.40
4069 8131 9.659830 CCCATAATATAAGAGCGTTTTTAACAC 57.340 33.333 0.00 0.00 0.00 3.32
4070 8132 9.616156 TCCCATAATATAAGAGCGTTTTTAACA 57.384 29.630 0.00 0.00 0.00 2.41
4071 8133 9.874215 GTCCCATAATATAAGAGCGTTTTTAAC 57.126 33.333 0.00 0.00 0.00 2.01
4072 8134 9.616156 TGTCCCATAATATAAGAGCGTTTTTAA 57.384 29.630 0.00 0.00 0.00 1.52
4073 8135 9.268268 CTGTCCCATAATATAAGAGCGTTTTTA 57.732 33.333 0.00 0.00 0.00 1.52
4074 8136 7.228706 CCTGTCCCATAATATAAGAGCGTTTTT 59.771 37.037 0.00 0.00 0.00 1.94
4075 8137 6.710744 CCTGTCCCATAATATAAGAGCGTTTT 59.289 38.462 0.00 0.00 0.00 2.43
4076 8138 6.231211 CCTGTCCCATAATATAAGAGCGTTT 58.769 40.000 0.00 0.00 0.00 3.60
4077 8139 5.280011 CCCTGTCCCATAATATAAGAGCGTT 60.280 44.000 0.00 0.00 0.00 4.84
4078 8140 4.223032 CCCTGTCCCATAATATAAGAGCGT 59.777 45.833 0.00 0.00 0.00 5.07
4079 8141 4.383118 CCCCTGTCCCATAATATAAGAGCG 60.383 50.000 0.00 0.00 0.00 5.03
4080 8142 4.783227 TCCCCTGTCCCATAATATAAGAGC 59.217 45.833 0.00 0.00 0.00 4.09
4081 8143 6.026186 ACTCCCCTGTCCCATAATATAAGAG 58.974 44.000 0.00 0.00 0.00 2.85
4082 8144 5.989717 ACTCCCCTGTCCCATAATATAAGA 58.010 41.667 0.00 0.00 0.00 2.10
4083 8145 6.960542 AGTACTCCCCTGTCCCATAATATAAG 59.039 42.308 0.00 0.00 0.00 1.73
4084 8146 6.882155 AGTACTCCCCTGTCCCATAATATAA 58.118 40.000 0.00 0.00 0.00 0.98
4085 8147 6.494429 AGTACTCCCCTGTCCCATAATATA 57.506 41.667 0.00 0.00 0.00 0.86
4086 8148 5.370623 AGTACTCCCCTGTCCCATAATAT 57.629 43.478 0.00 0.00 0.00 1.28
4087 8149 4.845530 AGTACTCCCCTGTCCCATAATA 57.154 45.455 0.00 0.00 0.00 0.98
4088 8150 3.726837 AGTACTCCCCTGTCCCATAAT 57.273 47.619 0.00 0.00 0.00 1.28
4089 8151 3.013648 AGAAGTACTCCCCTGTCCCATAA 59.986 47.826 0.00 0.00 0.00 1.90
4090 8152 2.590611 AGAAGTACTCCCCTGTCCCATA 59.409 50.000 0.00 0.00 0.00 2.74
4091 8153 1.366435 AGAAGTACTCCCCTGTCCCAT 59.634 52.381 0.00 0.00 0.00 4.00
4092 8154 0.790993 AGAAGTACTCCCCTGTCCCA 59.209 55.000 0.00 0.00 0.00 4.37
4093 8155 1.196012 CAGAAGTACTCCCCTGTCCC 58.804 60.000 0.00 0.00 0.00 4.46
4094 8156 2.233305 TCAGAAGTACTCCCCTGTCC 57.767 55.000 15.21 0.00 0.00 4.02
4095 8157 4.538738 AGTATCAGAAGTACTCCCCTGTC 58.461 47.826 15.21 1.88 0.00 3.51
4096 8158 4.611564 AGTATCAGAAGTACTCCCCTGT 57.388 45.455 15.21 8.68 0.00 4.00
4097 8159 7.507616 AGATTAAGTATCAGAAGTACTCCCCTG 59.492 40.741 0.00 4.76 35.59 4.45
4098 8160 7.597327 AGATTAAGTATCAGAAGTACTCCCCT 58.403 38.462 0.00 0.00 35.59 4.79
4099 8161 7.842887 AGATTAAGTATCAGAAGTACTCCCC 57.157 40.000 0.00 0.00 35.59 4.81
4100 8162 7.654116 GCAAGATTAAGTATCAGAAGTACTCCC 59.346 40.741 0.00 0.00 35.59 4.30
4101 8163 8.198109 TGCAAGATTAAGTATCAGAAGTACTCC 58.802 37.037 0.00 0.00 35.59 3.85
4102 8164 9.026074 GTGCAAGATTAAGTATCAGAAGTACTC 57.974 37.037 0.00 0.00 35.59 2.59
4103 8165 7.982354 GGTGCAAGATTAAGTATCAGAAGTACT 59.018 37.037 0.00 0.00 35.59 2.73
4104 8166 7.043325 CGGTGCAAGATTAAGTATCAGAAGTAC 60.043 40.741 0.00 0.00 35.59 2.73
4105 8167 6.978659 CGGTGCAAGATTAAGTATCAGAAGTA 59.021 38.462 0.00 0.00 35.59 2.24
4106 8168 5.812642 CGGTGCAAGATTAAGTATCAGAAGT 59.187 40.000 0.00 0.00 35.59 3.01
4215 8277 2.358003 GCAGCACTCGCAGGTCTT 60.358 61.111 0.00 0.00 42.27 3.01
4409 8472 5.242838 TCTCTTATTTTTGGCGACCAACAAT 59.757 36.000 19.60 19.60 43.82 2.71
4429 8492 2.634940 ACACACCAACAGCATACTCTCT 59.365 45.455 0.00 0.00 0.00 3.10
4430 8493 2.738846 CACACACCAACAGCATACTCTC 59.261 50.000 0.00 0.00 0.00 3.20
4494 8559 5.045869 TCAATACAAATCGGAGGATATCCCC 60.046 44.000 18.56 16.92 46.50 4.81
4499 8564 8.044309 TGAAAGTTCAATACAAATCGGAGGATA 58.956 33.333 0.00 0.00 33.55 2.59
4535 8601 7.714813 GGTATATAGTGGGGCGTTTAAAAGTAA 59.285 37.037 3.09 0.00 0.00 2.24
4547 8613 9.969001 TCTTTTTATATTGGTATATAGTGGGGC 57.031 33.333 0.00 0.00 32.28 5.80
4582 8648 3.054802 GGGTGAGATGTGTTGGATCTTCT 60.055 47.826 0.00 0.00 29.97 2.85
4604 8670 3.719763 CGTTGCATAGACACGGTTAAACG 60.720 47.826 12.25 12.25 40.31 3.60
4636 8702 2.158254 GTTTACCGCTAAACACCGAAGG 59.842 50.000 8.21 0.00 42.39 3.46
4652 8718 3.851403 CGCATGGTGCTAAACATGTTTAC 59.149 43.478 23.91 17.84 44.74 2.01
4772 10424 9.626045 TGCACACGATATTAGACAAGATATTAG 57.374 33.333 0.00 0.00 0.00 1.73
4777 10429 6.986231 TCAATGCACACGATATTAGACAAGAT 59.014 34.615 0.00 0.00 0.00 2.40
4791 10443 4.180817 TCCACTAGTAATCAATGCACACG 58.819 43.478 0.00 0.00 0.00 4.49
4792 10444 6.494893 TTTCCACTAGTAATCAATGCACAC 57.505 37.500 0.00 0.00 0.00 3.82
4818 10478 1.134098 CCCGTCCAGTATTTCCATGCT 60.134 52.381 0.00 0.00 0.00 3.79
4822 10482 1.202099 TGCCCCGTCCAGTATTTCCA 61.202 55.000 0.00 0.00 0.00 3.53
4832 10492 2.969827 CACCAAAATGCCCCGTCC 59.030 61.111 0.00 0.00 0.00 4.79
4833 10493 2.261361 GCACCAAAATGCCCCGTC 59.739 61.111 0.00 0.00 39.86 4.79
4839 10499 1.079612 GAGCCTGGCACCAAAATGC 60.080 57.895 22.65 0.00 45.34 3.56
4840 10500 0.245539 CTGAGCCTGGCACCAAAATG 59.754 55.000 22.65 2.87 0.00 2.32
4841 10501 1.538687 GCTGAGCCTGGCACCAAAAT 61.539 55.000 22.65 0.00 0.00 1.82
4842 10502 2.202395 GCTGAGCCTGGCACCAAAA 61.202 57.895 22.65 0.00 0.00 2.44
4843 10503 1.778017 TAGCTGAGCCTGGCACCAAA 61.778 55.000 22.65 4.24 0.00 3.28
4844 10504 2.223443 TAGCTGAGCCTGGCACCAA 61.223 57.895 22.65 1.85 0.00 3.67
4845 10505 2.607442 TAGCTGAGCCTGGCACCA 60.607 61.111 22.65 16.61 0.00 4.17
4846 10506 2.124942 GTAGCTGAGCCTGGCACC 60.125 66.667 22.65 12.64 0.00 5.01
4847 10507 1.743252 GTGTAGCTGAGCCTGGCAC 60.743 63.158 22.65 15.93 0.00 5.01
4848 10508 2.665000 GTGTAGCTGAGCCTGGCA 59.335 61.111 22.65 0.00 0.00 4.92
4849 10509 2.124942 GGTGTAGCTGAGCCTGGC 60.125 66.667 11.65 11.65 0.00 4.85
4850 10510 0.687757 TAGGGTGTAGCTGAGCCTGG 60.688 60.000 22.30 0.00 41.49 4.45
4851 10511 1.195115 TTAGGGTGTAGCTGAGCCTG 58.805 55.000 22.30 0.00 41.49 4.85
4852 10512 1.952621 TTTAGGGTGTAGCTGAGCCT 58.047 50.000 18.98 18.98 43.77 4.58
4853 10513 2.485657 GGATTTAGGGTGTAGCTGAGCC 60.486 54.545 0.00 1.49 0.00 4.70
4854 10514 2.170607 TGGATTTAGGGTGTAGCTGAGC 59.829 50.000 0.00 0.00 0.00 4.26
4855 10515 3.706594 TCTGGATTTAGGGTGTAGCTGAG 59.293 47.826 0.00 0.00 0.00 3.35
4856 10516 3.719871 TCTGGATTTAGGGTGTAGCTGA 58.280 45.455 0.00 0.00 0.00 4.26
4857 10517 4.636249 GATCTGGATTTAGGGTGTAGCTG 58.364 47.826 0.00 0.00 0.00 4.24
4858 10518 3.322254 CGATCTGGATTTAGGGTGTAGCT 59.678 47.826 0.00 0.00 0.00 3.32
4859 10519 3.069729 ACGATCTGGATTTAGGGTGTAGC 59.930 47.826 0.00 0.00 0.00 3.58
4860 10520 4.262079 GGACGATCTGGATTTAGGGTGTAG 60.262 50.000 0.00 0.00 0.00 2.74
4861 10521 3.640029 GGACGATCTGGATTTAGGGTGTA 59.360 47.826 0.00 0.00 0.00 2.90
4862 10522 2.434702 GGACGATCTGGATTTAGGGTGT 59.565 50.000 0.00 0.00 0.00 4.16
4863 10523 2.545952 CGGACGATCTGGATTTAGGGTG 60.546 54.545 0.00 0.00 0.00 4.61
4864 10524 1.687123 CGGACGATCTGGATTTAGGGT 59.313 52.381 0.00 0.00 0.00 4.34
4865 10525 1.687123 ACGGACGATCTGGATTTAGGG 59.313 52.381 0.00 0.00 0.00 3.53
4866 10526 3.123804 CAACGGACGATCTGGATTTAGG 58.876 50.000 0.00 0.00 0.00 2.69
4867 10527 4.041740 TCAACGGACGATCTGGATTTAG 57.958 45.455 0.00 0.00 0.00 1.85
4868 10528 3.737047 GCTCAACGGACGATCTGGATTTA 60.737 47.826 0.00 0.00 0.00 1.40
4869 10529 2.893637 CTCAACGGACGATCTGGATTT 58.106 47.619 0.00 0.00 0.00 2.17
4870 10530 1.471676 GCTCAACGGACGATCTGGATT 60.472 52.381 0.00 0.00 0.00 3.01
4871 10531 0.103208 GCTCAACGGACGATCTGGAT 59.897 55.000 0.00 0.00 0.00 3.41
4872 10532 1.511305 GCTCAACGGACGATCTGGA 59.489 57.895 0.00 0.00 0.00 3.86
4873 10533 1.519455 GGCTCAACGGACGATCTGG 60.519 63.158 0.00 0.00 0.00 3.86
4874 10534 0.179100 ATGGCTCAACGGACGATCTG 60.179 55.000 0.00 0.00 0.00 2.90
4875 10535 0.537188 AATGGCTCAACGGACGATCT 59.463 50.000 0.00 0.00 0.00 2.75
4876 10536 0.652592 CAATGGCTCAACGGACGATC 59.347 55.000 0.00 0.00 0.00 3.69
4877 10537 0.744414 CCAATGGCTCAACGGACGAT 60.744 55.000 0.00 0.00 0.00 3.73
4878 10538 1.375396 CCAATGGCTCAACGGACGA 60.375 57.895 0.00 0.00 0.00 4.20
4879 10539 2.398554 CCCAATGGCTCAACGGACG 61.399 63.158 0.00 0.00 0.00 4.79
4880 10540 0.394352 ATCCCAATGGCTCAACGGAC 60.394 55.000 0.00 0.00 0.00 4.79
4881 10541 0.394216 CATCCCAATGGCTCAACGGA 60.394 55.000 0.00 0.00 0.00 4.69
4882 10542 2.008268 GCATCCCAATGGCTCAACGG 62.008 60.000 0.00 0.00 33.19 4.44
4883 10543 1.434696 GCATCCCAATGGCTCAACG 59.565 57.895 0.00 0.00 33.19 4.10
4884 10544 1.031571 TCGCATCCCAATGGCTCAAC 61.032 55.000 0.00 0.00 33.19 3.18
4885 10545 0.749091 CTCGCATCCCAATGGCTCAA 60.749 55.000 0.00 0.00 33.19 3.02
4886 10546 1.153107 CTCGCATCCCAATGGCTCA 60.153 57.895 0.00 0.00 33.19 4.26
4887 10547 0.464373 TTCTCGCATCCCAATGGCTC 60.464 55.000 0.00 0.00 33.19 4.70
4888 10548 0.034186 TTTCTCGCATCCCAATGGCT 60.034 50.000 0.00 0.00 33.19 4.75
4889 10549 0.383231 CTTTCTCGCATCCCAATGGC 59.617 55.000 0.00 0.00 33.19 4.40
4890 10550 1.672881 GACTTTCTCGCATCCCAATGG 59.327 52.381 0.00 0.00 33.19 3.16
4891 10551 1.672881 GGACTTTCTCGCATCCCAATG 59.327 52.381 0.00 0.00 35.87 2.82
4892 10552 1.281867 TGGACTTTCTCGCATCCCAAT 59.718 47.619 0.00 0.00 0.00 3.16
4893 10553 0.690192 TGGACTTTCTCGCATCCCAA 59.310 50.000 0.00 0.00 0.00 4.12
4894 10554 0.250234 CTGGACTTTCTCGCATCCCA 59.750 55.000 0.00 0.00 0.00 4.37
4895 10555 1.092345 GCTGGACTTTCTCGCATCCC 61.092 60.000 0.00 0.00 0.00 3.85
4896 10556 0.107945 AGCTGGACTTTCTCGCATCC 60.108 55.000 0.00 0.00 0.00 3.51
4897 10557 1.005340 CAGCTGGACTTTCTCGCATC 58.995 55.000 5.57 0.00 0.00 3.91
4898 10558 0.392193 CCAGCTGGACTTTCTCGCAT 60.392 55.000 29.88 0.00 37.39 4.73
4899 10559 1.004560 CCAGCTGGACTTTCTCGCA 60.005 57.895 29.88 0.00 37.39 5.10
4900 10560 1.004440 ACCAGCTGGACTTTCTCGC 60.004 57.895 39.19 0.00 38.94 5.03
4901 10561 1.294659 GCACCAGCTGGACTTTCTCG 61.295 60.000 39.19 15.88 38.94 4.04
4902 10562 0.250467 TGCACCAGCTGGACTTTCTC 60.250 55.000 39.19 17.67 42.74 2.87
4903 10563 0.250640 CTGCACCAGCTGGACTTTCT 60.251 55.000 39.19 13.13 42.74 2.52
4904 10564 2.251600 CTGCACCAGCTGGACTTTC 58.748 57.895 39.19 20.60 42.74 2.62
4905 10565 4.488790 CTGCACCAGCTGGACTTT 57.511 55.556 39.19 14.42 42.74 2.66
4914 10574 1.589716 GGCCTAAACTGCTGCACCAG 61.590 60.000 7.50 7.50 38.78 4.00
4915 10575 1.603455 GGCCTAAACTGCTGCACCA 60.603 57.895 0.00 0.00 0.00 4.17
4916 10576 2.343426 GGGCCTAAACTGCTGCACC 61.343 63.158 0.84 0.00 0.00 5.01
4917 10577 2.690778 CGGGCCTAAACTGCTGCAC 61.691 63.158 0.84 0.00 0.00 4.57
4918 10578 2.359850 CGGGCCTAAACTGCTGCA 60.360 61.111 0.84 0.88 0.00 4.41
4919 10579 2.359975 ACGGGCCTAAACTGCTGC 60.360 61.111 0.84 0.00 0.00 5.25
4920 10580 2.040544 CCACGGGCCTAAACTGCTG 61.041 63.158 0.84 0.00 0.00 4.41
4921 10581 1.774894 TTCCACGGGCCTAAACTGCT 61.775 55.000 0.84 0.00 0.00 4.24
4922 10582 0.891904 TTTCCACGGGCCTAAACTGC 60.892 55.000 0.84 0.00 0.00 4.40
4923 10583 1.539827 CTTTTCCACGGGCCTAAACTG 59.460 52.381 0.84 0.00 0.00 3.16
4924 10584 1.546998 CCTTTTCCACGGGCCTAAACT 60.547 52.381 0.84 0.00 0.00 2.66
4925 10585 0.885879 CCTTTTCCACGGGCCTAAAC 59.114 55.000 0.84 0.00 0.00 2.01
4926 10586 0.772384 TCCTTTTCCACGGGCCTAAA 59.228 50.000 0.84 0.00 0.00 1.85
4927 10587 0.772384 TTCCTTTTCCACGGGCCTAA 59.228 50.000 0.84 0.00 0.00 2.69
4928 10588 0.326927 CTTCCTTTTCCACGGGCCTA 59.673 55.000 0.84 0.00 0.00 3.93
4929 10589 1.074951 CTTCCTTTTCCACGGGCCT 59.925 57.895 0.84 0.00 0.00 5.19
4930 10590 0.323451 ATCTTCCTTTTCCACGGGCC 60.323 55.000 0.00 0.00 0.00 5.80
4931 10591 2.014857 GTATCTTCCTTTTCCACGGGC 58.985 52.381 0.00 0.00 0.00 6.13
4932 10592 2.277084 CGTATCTTCCTTTTCCACGGG 58.723 52.381 0.00 0.00 0.00 5.28
4933 10593 2.277084 CCGTATCTTCCTTTTCCACGG 58.723 52.381 0.00 0.00 41.12 4.94
4934 10594 2.968675 ACCGTATCTTCCTTTTCCACG 58.031 47.619 0.00 0.00 0.00 4.94
4935 10595 3.869832 GCTACCGTATCTTCCTTTTCCAC 59.130 47.826 0.00 0.00 0.00 4.02
4936 10596 3.429822 CGCTACCGTATCTTCCTTTTCCA 60.430 47.826 0.00 0.00 0.00 3.53
4937 10597 3.121544 CGCTACCGTATCTTCCTTTTCC 58.878 50.000 0.00 0.00 0.00 3.13
4938 10598 4.037858 TCGCTACCGTATCTTCCTTTTC 57.962 45.455 0.00 0.00 35.54 2.29
4939 10599 4.460948 TTCGCTACCGTATCTTCCTTTT 57.539 40.909 0.00 0.00 35.54 2.27
4940 10600 4.667519 ATTCGCTACCGTATCTTCCTTT 57.332 40.909 0.00 0.00 35.54 3.11
4941 10601 4.320057 CGTATTCGCTACCGTATCTTCCTT 60.320 45.833 0.00 0.00 35.54 3.36
4942 10602 3.188048 CGTATTCGCTACCGTATCTTCCT 59.812 47.826 0.00 0.00 35.54 3.36
4943 10603 3.058639 ACGTATTCGCTACCGTATCTTCC 60.059 47.826 0.00 0.00 41.18 3.46
4944 10604 3.904824 CACGTATTCGCTACCGTATCTTC 59.095 47.826 0.00 0.00 41.18 2.87
4945 10605 3.304257 CCACGTATTCGCTACCGTATCTT 60.304 47.826 0.00 0.00 41.18 2.40
4946 10606 2.225019 CCACGTATTCGCTACCGTATCT 59.775 50.000 0.00 0.00 41.18 1.98
4947 10607 2.031682 ACCACGTATTCGCTACCGTATC 60.032 50.000 0.00 0.00 41.18 2.24
4948 10608 1.949525 ACCACGTATTCGCTACCGTAT 59.050 47.619 0.00 0.00 41.18 3.06
4949 10609 1.063912 CACCACGTATTCGCTACCGTA 59.936 52.381 0.00 0.00 41.18 4.02
4950 10610 0.179156 CACCACGTATTCGCTACCGT 60.179 55.000 0.00 0.00 41.18 4.83
4951 10611 1.477030 GCACCACGTATTCGCTACCG 61.477 60.000 0.00 0.00 41.18 4.02
4952 10612 0.458889 TGCACCACGTATTCGCTACC 60.459 55.000 0.00 0.00 41.18 3.18
4953 10613 0.643820 GTGCACCACGTATTCGCTAC 59.356 55.000 5.22 0.00 41.18 3.58
4954 10614 0.244178 TGTGCACCACGTATTCGCTA 59.756 50.000 15.69 0.00 41.18 4.26
4955 10615 1.005512 TGTGCACCACGTATTCGCT 60.006 52.632 15.69 0.00 41.18 4.93
4956 10616 1.289109 ACTGTGCACCACGTATTCGC 61.289 55.000 15.69 0.00 41.18 4.70
4957 10617 0.438445 CACTGTGCACCACGTATTCG 59.562 55.000 15.69 0.00 37.14 3.34
4958 10618 1.459592 GACACTGTGCACCACGTATTC 59.540 52.381 15.69 5.44 37.14 1.75
4959 10619 1.508632 GACACTGTGCACCACGTATT 58.491 50.000 15.69 0.00 37.14 1.89
4960 10620 0.666274 CGACACTGTGCACCACGTAT 60.666 55.000 15.69 0.00 37.14 3.06
4961 10621 1.299544 CGACACTGTGCACCACGTA 60.300 57.895 15.69 0.00 37.14 3.57
4962 10622 2.007113 TACGACACTGTGCACCACGT 62.007 55.000 15.69 18.77 37.14 4.49
4963 10623 0.666274 ATACGACACTGTGCACCACG 60.666 55.000 15.69 14.28 37.14 4.94
4964 10624 0.790207 CATACGACACTGTGCACCAC 59.210 55.000 15.69 0.23 34.56 4.16
4965 10625 0.391228 ACATACGACACTGTGCACCA 59.609 50.000 15.69 1.31 0.00 4.17
4966 10626 0.790207 CACATACGACACTGTGCACC 59.210 55.000 15.69 0.00 36.65 5.01
4967 10627 0.790207 CCACATACGACACTGTGCAC 59.210 55.000 10.75 10.75 41.10 4.57
4968 10628 0.320334 CCCACATACGACACTGTGCA 60.320 55.000 7.90 0.00 41.10 4.57
4969 10629 1.635663 GCCCACATACGACACTGTGC 61.636 60.000 7.90 0.00 41.10 4.57
4970 10630 1.019278 GGCCCACATACGACACTGTG 61.019 60.000 6.19 6.19 41.89 3.66
4971 10631 1.192146 AGGCCCACATACGACACTGT 61.192 55.000 0.00 0.00 0.00 3.55
4972 10632 0.036388 AAGGCCCACATACGACACTG 60.036 55.000 0.00 0.00 0.00 3.66
4973 10633 0.690762 AAAGGCCCACATACGACACT 59.309 50.000 0.00 0.00 0.00 3.55
4974 10634 1.467342 GAAAAGGCCCACATACGACAC 59.533 52.381 0.00 0.00 0.00 3.67
4975 10635 1.816074 GAAAAGGCCCACATACGACA 58.184 50.000 0.00 0.00 0.00 4.35
4976 10636 0.725117 CGAAAAGGCCCACATACGAC 59.275 55.000 0.00 0.00 0.00 4.34
4977 10637 0.391927 CCGAAAAGGCCCACATACGA 60.392 55.000 0.00 0.00 0.00 3.43
4978 10638 0.675522 ACCGAAAAGGCCCACATACG 60.676 55.000 0.00 0.00 46.52 3.06
4979 10639 2.406596 TACCGAAAAGGCCCACATAC 57.593 50.000 0.00 0.00 46.52 2.39
4980 10640 2.422235 CCATACCGAAAAGGCCCACATA 60.422 50.000 0.00 0.00 46.52 2.29
4981 10641 1.684869 CCATACCGAAAAGGCCCACAT 60.685 52.381 0.00 0.00 46.52 3.21
4982 10642 0.322997 CCATACCGAAAAGGCCCACA 60.323 55.000 0.00 0.00 46.52 4.17
4983 10643 1.035385 CCCATACCGAAAAGGCCCAC 61.035 60.000 0.00 0.00 46.52 4.61
4984 10644 1.304952 CCCATACCGAAAAGGCCCA 59.695 57.895 0.00 0.00 46.52 5.36
4985 10645 2.125326 GCCCATACCGAAAAGGCCC 61.125 63.158 0.00 0.00 46.52 5.80
4986 10646 2.478033 CGCCCATACCGAAAAGGCC 61.478 63.158 0.00 0.00 46.52 5.19
4987 10647 1.712018 GACGCCCATACCGAAAAGGC 61.712 60.000 0.00 0.00 46.52 4.35
4989 10649 2.390427 GGACGCCCATACCGAAAAG 58.610 57.895 0.00 0.00 0.00 2.27
4990 10650 4.621832 GGACGCCCATACCGAAAA 57.378 55.556 0.00 0.00 0.00 2.29
4995 10655 3.763127 GACGACGGACGCCCATACC 62.763 68.421 0.00 0.00 46.94 2.73
4996 10656 2.278401 GACGACGGACGCCCATAC 60.278 66.667 0.00 0.00 46.94 2.39
4997 10657 3.879682 CGACGACGGACGCCCATA 61.880 66.667 0.00 0.00 46.94 2.74
5026 10686 4.057428 AGTGACAGAGCCGTCCGC 62.057 66.667 0.00 0.00 34.88 5.54
5027 10687 2.126307 CAGTGACAGAGCCGTCCG 60.126 66.667 0.00 0.00 34.88 4.79
5028 10688 2.262915 CCAGTGACAGAGCCGTCC 59.737 66.667 0.00 0.00 34.88 4.79
5029 10689 1.608717 ATCCCAGTGACAGAGCCGTC 61.609 60.000 0.00 0.00 36.40 4.79
5030 10690 1.610673 ATCCCAGTGACAGAGCCGT 60.611 57.895 0.00 0.00 0.00 5.68
5031 10691 1.153489 CATCCCAGTGACAGAGCCG 60.153 63.158 0.00 0.00 0.00 5.52
5032 10692 1.222936 CCATCCCAGTGACAGAGCC 59.777 63.158 0.00 0.00 0.00 4.70
5033 10693 1.222936 CCCATCCCAGTGACAGAGC 59.777 63.158 0.00 0.00 0.00 4.09
5034 10694 1.222936 GCCCATCCCAGTGACAGAG 59.777 63.158 0.00 0.00 0.00 3.35
5035 10695 1.538629 TGCCCATCCCAGTGACAGA 60.539 57.895 0.00 0.00 0.00 3.41
5036 10696 1.077930 CTGCCCATCCCAGTGACAG 60.078 63.158 0.00 0.00 0.00 3.51
5037 10697 1.847506 ACTGCCCATCCCAGTGACA 60.848 57.895 0.00 0.00 41.68 3.58
5038 10698 3.081554 ACTGCCCATCCCAGTGAC 58.918 61.111 0.00 0.00 41.68 3.67
5041 10701 4.052518 GGCACTGCCCATCCCAGT 62.053 66.667 9.13 0.00 44.06 4.00
5056 10716 1.369091 CTAACGACCTGTGCCATGGC 61.369 60.000 30.54 30.54 42.35 4.40
5057 10717 0.036388 ACTAACGACCTGTGCCATGG 60.036 55.000 7.63 7.63 0.00 3.66
5058 10718 1.359848 GACTAACGACCTGTGCCATG 58.640 55.000 0.00 0.00 0.00 3.66
5059 10719 0.108804 CGACTAACGACCTGTGCCAT 60.109 55.000 0.00 0.00 45.77 4.40
5060 10720 1.174078 TCGACTAACGACCTGTGCCA 61.174 55.000 0.00 0.00 46.45 4.92
5061 10721 0.456312 CTCGACTAACGACCTGTGCC 60.456 60.000 0.00 0.00 46.45 5.01
5062 10722 0.456312 CCTCGACTAACGACCTGTGC 60.456 60.000 0.00 0.00 46.45 4.57
5063 10723 0.170561 CCCTCGACTAACGACCTGTG 59.829 60.000 0.00 0.00 46.45 3.66
5064 10724 0.037303 TCCCTCGACTAACGACCTGT 59.963 55.000 0.00 0.00 46.45 4.00
5065 10725 0.733729 CTCCCTCGACTAACGACCTG 59.266 60.000 0.00 0.00 46.45 4.00
5066 10726 1.031029 GCTCCCTCGACTAACGACCT 61.031 60.000 0.00 0.00 46.45 3.85
5067 10727 1.432657 GCTCCCTCGACTAACGACC 59.567 63.158 0.00 0.00 46.45 4.79
5068 10728 1.062206 CGCTCCCTCGACTAACGAC 59.938 63.158 0.00 0.00 46.45 4.34
5070 10730 1.226323 CACGCTCCCTCGACTAACG 60.226 63.158 0.00 0.00 44.09 3.18
5071 10731 1.139095 CCACGCTCCCTCGACTAAC 59.861 63.158 0.00 0.00 0.00 2.34
5072 10732 0.609957 TTCCACGCTCCCTCGACTAA 60.610 55.000 0.00 0.00 0.00 2.24
5073 10733 0.609957 TTTCCACGCTCCCTCGACTA 60.610 55.000 0.00 0.00 0.00 2.59
5074 10734 1.258445 ATTTCCACGCTCCCTCGACT 61.258 55.000 0.00 0.00 0.00 4.18
5075 10735 0.806492 GATTTCCACGCTCCCTCGAC 60.806 60.000 0.00 0.00 0.00 4.20
5076 10736 1.515954 GATTTCCACGCTCCCTCGA 59.484 57.895 0.00 0.00 0.00 4.04
5077 10737 1.521681 GGATTTCCACGCTCCCTCG 60.522 63.158 0.00 0.00 35.64 4.63
5078 10738 0.462759 CTGGATTTCCACGCTCCCTC 60.463 60.000 0.00 0.00 42.01 4.30
5079 10739 0.909610 TCTGGATTTCCACGCTCCCT 60.910 55.000 0.00 0.00 42.01 4.20
5080 10740 0.462759 CTCTGGATTTCCACGCTCCC 60.463 60.000 0.00 0.00 42.01 4.30
5081 10741 1.092345 GCTCTGGATTTCCACGCTCC 61.092 60.000 0.00 0.00 42.01 4.70
5082 10742 1.092345 GGCTCTGGATTTCCACGCTC 61.092 60.000 13.02 3.87 42.01 5.03
5083 10743 1.078143 GGCTCTGGATTTCCACGCT 60.078 57.895 13.02 0.00 42.01 5.07
5084 10744 2.464459 CGGCTCTGGATTTCCACGC 61.464 63.158 0.00 1.74 42.01 5.34
5085 10745 1.079127 ACGGCTCTGGATTTCCACG 60.079 57.895 0.00 0.67 42.01 4.94
5086 10746 0.036388 TGACGGCTCTGGATTTCCAC 60.036 55.000 0.00 0.00 42.01 4.02
5087 10747 0.911769 ATGACGGCTCTGGATTTCCA 59.088 50.000 0.00 0.00 45.30 3.53
5088 10748 1.587547 GATGACGGCTCTGGATTTCC 58.412 55.000 0.00 0.00 0.00 3.13
5089 10749 1.587547 GGATGACGGCTCTGGATTTC 58.412 55.000 0.00 0.00 0.00 2.17
5090 10750 0.181350 GGGATGACGGCTCTGGATTT 59.819 55.000 0.00 0.00 0.00 2.17
5091 10751 0.982852 TGGGATGACGGCTCTGGATT 60.983 55.000 0.00 0.00 0.00 3.01
5092 10752 0.765903 ATGGGATGACGGCTCTGGAT 60.766 55.000 0.00 0.00 0.00 3.41
5093 10753 1.383109 ATGGGATGACGGCTCTGGA 60.383 57.895 0.00 0.00 0.00 3.86
5094 10754 1.070445 GATGGGATGACGGCTCTGG 59.930 63.158 0.00 0.00 0.00 3.86
5095 10755 1.300465 CGATGGGATGACGGCTCTG 60.300 63.158 0.00 0.00 0.00 3.35
5096 10756 2.502492 CCGATGGGATGACGGCTCT 61.502 63.158 0.00 0.00 40.19 4.09
5097 10757 2.029666 CCGATGGGATGACGGCTC 59.970 66.667 0.00 0.00 40.19 4.70
5101 10761 1.889105 CCAAGCCGATGGGATGACG 60.889 63.158 0.00 0.00 36.79 4.35
5102 10762 4.147701 CCAAGCCGATGGGATGAC 57.852 61.111 0.00 0.00 36.79 3.06
5114 10774 4.133796 GCAATGACGGGCCCAAGC 62.134 66.667 24.92 11.89 38.76 4.01
5115 10775 2.676121 TGCAATGACGGGCCCAAG 60.676 61.111 24.92 9.21 0.00 3.61
5116 10776 2.676121 CTGCAATGACGGGCCCAA 60.676 61.111 24.92 6.98 0.00 4.12
5117 10777 4.738998 CCTGCAATGACGGGCCCA 62.739 66.667 24.92 1.51 0.00 5.36
5119 10779 4.740822 ACCCTGCAATGACGGGCC 62.741 66.667 7.87 0.00 41.86 5.80
5120 10780 2.676471 AACCCTGCAATGACGGGC 60.676 61.111 7.87 0.00 41.86 6.13
5121 10781 3.277133 CAACCCTGCAATGACGGG 58.723 61.111 6.43 6.43 43.79 5.28
5131 10791 1.741732 CGAGATCCAAGAGCAACCCTG 60.742 57.143 0.00 0.00 0.00 4.45
5132 10792 0.539051 CGAGATCCAAGAGCAACCCT 59.461 55.000 0.00 0.00 0.00 4.34
5133 10793 0.537188 TCGAGATCCAAGAGCAACCC 59.463 55.000 0.00 0.00 0.00 4.11
5134 10794 1.472376 CCTCGAGATCCAAGAGCAACC 60.472 57.143 15.71 0.00 0.00 3.77
5135 10795 1.472376 CCCTCGAGATCCAAGAGCAAC 60.472 57.143 15.71 0.00 0.00 4.17
5136 10796 0.826715 CCCTCGAGATCCAAGAGCAA 59.173 55.000 15.71 0.00 0.00 3.91
5137 10797 0.033109 TCCCTCGAGATCCAAGAGCA 60.033 55.000 15.71 0.00 0.00 4.26
5138 10798 1.115467 TTCCCTCGAGATCCAAGAGC 58.885 55.000 15.71 0.00 0.00 4.09
5139 10799 1.066303 CGTTCCCTCGAGATCCAAGAG 59.934 57.143 15.71 0.00 0.00 2.85
5140 10800 1.103803 CGTTCCCTCGAGATCCAAGA 58.896 55.000 15.71 0.00 0.00 3.02
5141 10801 1.103803 TCGTTCCCTCGAGATCCAAG 58.896 55.000 15.71 0.65 34.85 3.61
5142 10802 3.276281 TCGTTCCCTCGAGATCCAA 57.724 52.632 15.71 0.00 34.85 3.53
5149 10809 4.728110 TCGCCCTCGTTCCCTCGA 62.728 66.667 0.00 0.00 38.19 4.04
5150 10810 4.493747 GTCGCCCTCGTTCCCTCG 62.494 72.222 0.00 0.00 36.96 4.63
5151 10811 4.493747 CGTCGCCCTCGTTCCCTC 62.494 72.222 0.00 0.00 36.96 4.30
5153 10813 4.790861 GACGTCGCCCTCGTTCCC 62.791 72.222 0.00 0.00 41.64 3.97
5155 10815 3.996744 CTCGACGTCGCCCTCGTTC 62.997 68.421 32.19 0.00 41.64 3.95
5156 10816 4.099170 CTCGACGTCGCCCTCGTT 62.099 66.667 32.19 0.00 41.64 3.85
5159 10819 4.176851 GTCCTCGACGTCGCCCTC 62.177 72.222 32.19 17.98 39.60 4.30
5184 10844 4.864334 CCTCCATCCTGCCACGCC 62.864 72.222 0.00 0.00 0.00 5.68
5185 10845 3.746949 CTCCTCCATCCTGCCACGC 62.747 68.421 0.00 0.00 0.00 5.34
5186 10846 1.617018 TTCTCCTCCATCCTGCCACG 61.617 60.000 0.00 0.00 0.00 4.94
5187 10847 0.107459 GTTCTCCTCCATCCTGCCAC 60.107 60.000 0.00 0.00 0.00 5.01
5188 10848 1.617018 CGTTCTCCTCCATCCTGCCA 61.617 60.000 0.00 0.00 0.00 4.92
5189 10849 1.144936 CGTTCTCCTCCATCCTGCC 59.855 63.158 0.00 0.00 0.00 4.85
5190 10850 1.144936 CCGTTCTCCTCCATCCTGC 59.855 63.158 0.00 0.00 0.00 4.85
5191 10851 1.144936 GCCGTTCTCCTCCATCCTG 59.855 63.158 0.00 0.00 0.00 3.86
5192 10852 0.618968 AAGCCGTTCTCCTCCATCCT 60.619 55.000 0.00 0.00 0.00 3.24
5193 10853 0.462759 CAAGCCGTTCTCCTCCATCC 60.463 60.000 0.00 0.00 0.00 3.51
5194 10854 0.462759 CCAAGCCGTTCTCCTCCATC 60.463 60.000 0.00 0.00 0.00 3.51
5195 10855 0.909610 TCCAAGCCGTTCTCCTCCAT 60.910 55.000 0.00 0.00 0.00 3.41
5196 10856 1.535444 TCCAAGCCGTTCTCCTCCA 60.535 57.895 0.00 0.00 0.00 3.86
5197 10857 1.219393 CTCCAAGCCGTTCTCCTCC 59.781 63.158 0.00 0.00 0.00 4.30
5198 10858 0.321996 AACTCCAAGCCGTTCTCCTC 59.678 55.000 0.00 0.00 0.00 3.71
5199 10859 0.765510 AAACTCCAAGCCGTTCTCCT 59.234 50.000 0.00 0.00 0.00 3.69
5200 10860 0.875059 CAAACTCCAAGCCGTTCTCC 59.125 55.000 0.00 0.00 0.00 3.71
5201 10861 1.264288 CACAAACTCCAAGCCGTTCTC 59.736 52.381 0.00 0.00 0.00 2.87
5202 10862 1.308998 CACAAACTCCAAGCCGTTCT 58.691 50.000 0.00 0.00 0.00 3.01
5203 10863 0.317854 GCACAAACTCCAAGCCGTTC 60.318 55.000 0.00 0.00 0.00 3.95
5204 10864 0.751643 AGCACAAACTCCAAGCCGTT 60.752 50.000 0.00 0.00 0.00 4.44
5205 10865 1.152963 AGCACAAACTCCAAGCCGT 60.153 52.632 0.00 0.00 0.00 5.68
5206 10866 1.576421 GAGCACAAACTCCAAGCCG 59.424 57.895 0.00 0.00 0.00 5.52
5207 10867 0.884704 TCGAGCACAAACTCCAAGCC 60.885 55.000 0.00 0.00 32.79 4.35
5208 10868 1.129437 GATCGAGCACAAACTCCAAGC 59.871 52.381 0.00 0.00 32.79 4.01
5209 10869 2.414481 CAGATCGAGCACAAACTCCAAG 59.586 50.000 2.38 0.00 32.79 3.61
5210 10870 2.416747 CAGATCGAGCACAAACTCCAA 58.583 47.619 2.38 0.00 32.79 3.53
5211 10871 1.338105 CCAGATCGAGCACAAACTCCA 60.338 52.381 2.38 0.00 32.79 3.86
5212 10872 1.338200 ACCAGATCGAGCACAAACTCC 60.338 52.381 2.38 0.00 32.79 3.85
5213 10873 1.728971 CACCAGATCGAGCACAAACTC 59.271 52.381 2.38 0.00 0.00 3.01
5214 10874 1.609061 CCACCAGATCGAGCACAAACT 60.609 52.381 2.38 0.00 0.00 2.66
5215 10875 0.798776 CCACCAGATCGAGCACAAAC 59.201 55.000 2.38 0.00 0.00 2.93
5216 10876 0.396435 ACCACCAGATCGAGCACAAA 59.604 50.000 2.38 0.00 0.00 2.83
5217 10877 0.037326 GACCACCAGATCGAGCACAA 60.037 55.000 2.38 0.00 0.00 3.33
5218 10878 1.184970 TGACCACCAGATCGAGCACA 61.185 55.000 2.38 0.00 0.00 4.57
5219 10879 0.459237 CTGACCACCAGATCGAGCAC 60.459 60.000 2.38 0.00 45.78 4.40
5220 10880 1.607801 CCTGACCACCAGATCGAGCA 61.608 60.000 2.38 0.00 45.78 4.26
5221 10881 1.142748 CCTGACCACCAGATCGAGC 59.857 63.158 0.00 0.00 45.78 5.03
5222 10882 1.763968 TACCTGACCACCAGATCGAG 58.236 55.000 0.00 0.00 45.78 4.04
5223 10883 2.100197 CTTACCTGACCACCAGATCGA 58.900 52.381 0.00 0.00 45.78 3.59
5224 10884 2.100197 TCTTACCTGACCACCAGATCG 58.900 52.381 0.00 0.00 45.78 3.69
5225 10885 3.964031 AGATCTTACCTGACCACCAGATC 59.036 47.826 0.00 0.00 45.78 2.75
5226 10886 4.000928 AGATCTTACCTGACCACCAGAT 57.999 45.455 0.00 0.00 45.78 2.90
5227 10887 3.474798 AGATCTTACCTGACCACCAGA 57.525 47.619 0.00 0.00 45.78 3.86
5228 10888 4.559862 AAAGATCTTACCTGACCACCAG 57.440 45.455 8.75 0.00 42.55 4.00
5229 10889 4.993705 AAAAGATCTTACCTGACCACCA 57.006 40.909 8.75 0.00 0.00 4.17



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.