Multiple sequence alignment - TraesCS1D01G118300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G118300 chr1D 100.000 5924 0 0 1 5924 114152239 114158162 0.000000e+00 10940.0
1 TraesCS1D01G118300 chr1D 89.494 257 12 1 3072 3313 114155061 114155317 1.600000e-80 311.0
2 TraesCS1D01G118300 chr1D 89.494 257 12 1 2823 3079 114155310 114155551 1.600000e-80 311.0
3 TraesCS1D01G118300 chr1D 90.566 159 15 0 2373 2531 114154245 114154403 1.670000e-50 211.0
4 TraesCS1D01G118300 chr1D 90.566 159 15 0 2007 2165 114154611 114154769 1.670000e-50 211.0
5 TraesCS1D01G118300 chr1D 88.000 175 9 1 2649 2811 114154701 114154875 4.680000e-46 196.0
6 TraesCS1D01G118300 chr1D 88.000 175 9 1 2463 2637 114154887 114155049 4.680000e-46 196.0
7 TraesCS1D01G118300 chr1B 92.593 2781 120 25 258 2978 174985403 174988157 0.000000e+00 3916.0
8 TraesCS1D01G118300 chr1B 98.362 2198 33 3 3010 5206 174988156 174990351 0.000000e+00 3856.0
9 TraesCS1D01G118300 chr1B 91.185 363 12 6 5203 5561 174990319 174990665 5.370000e-130 475.0
10 TraesCS1D01G118300 chr1B 91.440 257 7 1 2823 3079 174988218 174988459 7.350000e-89 339.0
11 TraesCS1D01G118300 chr1B 92.889 225 13 3 4985 5206 307151112 307150888 2.060000e-84 324.0
12 TraesCS1D01G118300 chr1B 86.331 278 20 8 1 261 174984896 174985172 2.700000e-73 287.0
13 TraesCS1D01G118300 chr1B 95.429 175 8 0 2463 2637 174987816 174987990 4.520000e-71 279.0
14 TraesCS1D01G118300 chr1B 94.022 184 10 1 5621 5803 602226096 602226279 1.630000e-70 278.0
15 TraesCS1D01G118300 chr1B 88.017 242 11 5 3072 3313 174988002 174988225 2.720000e-68 270.0
16 TraesCS1D01G118300 chr1B 88.608 158 18 0 2008 2165 174987538 174987695 6.060000e-45 193.0
17 TraesCS1D01G118300 chr1B 89.630 135 14 0 2373 2507 174987186 174987320 7.890000e-39 172.0
18 TraesCS1D01G118300 chr1B 98.810 84 1 0 5207 5290 307150917 307150834 3.700000e-32 150.0
19 TraesCS1D01G118300 chr1A 92.168 2745 131 29 383 3079 124477943 124480651 0.000000e+00 3801.0
20 TraesCS1D01G118300 chr1A 97.705 2135 45 3 3072 5206 124480410 124482540 0.000000e+00 3668.0
21 TraesCS1D01G118300 chr1A 96.910 356 11 0 5207 5562 124482511 124482866 1.100000e-166 597.0
22 TraesCS1D01G118300 chr1A 93.714 175 11 0 2463 2637 124480224 124480398 4.550000e-66 263.0
23 TraesCS1D01G118300 chr1A 91.195 159 14 0 2373 2531 124479579 124479737 3.600000e-52 217.0
24 TraesCS1D01G118300 chr1A 89.937 159 16 0 2007 2165 124479945 124480103 7.780000e-49 206.0
25 TraesCS1D01G118300 chr1A 87.500 184 11 1 2648 2819 124480034 124480217 1.010000e-47 202.0
26 TraesCS1D01G118300 chr1A 95.312 64 2 1 331 393 124476604 124476667 3.780000e-17 100.0
27 TraesCS1D01G118300 chr5A 86.230 443 29 16 4772 5206 66097919 66097501 9.050000e-123 451.0
28 TraesCS1D01G118300 chr5A 95.238 84 4 0 5207 5290 66097530 66097447 3.720000e-27 134.0
29 TraesCS1D01G118300 chr2D 88.279 401 5 6 5564 5924 69264647 69264249 5.450000e-120 442.0
30 TraesCS1D01G118300 chr2D 88.066 243 25 3 5566 5806 86498445 86498685 9.720000e-73 285.0
31 TraesCS1D01G118300 chr7A 86.175 434 28 17 4781 5206 450288013 450287604 1.960000e-119 440.0
32 TraesCS1D01G118300 chr7A 85.393 445 28 18 4768 5206 117820668 117821081 1.530000e-115 427.0
33 TraesCS1D01G118300 chr7A 93.023 43 2 1 5451 5492 73758971 73759013 1.780000e-05 62.1
34 TraesCS1D01G118300 chr3D 97.590 249 5 1 5566 5814 539501510 539501263 5.490000e-115 425.0
35 TraesCS1D01G118300 chr3D 96.023 176 7 0 5621 5796 69647250 69647425 2.700000e-73 287.0
36 TraesCS1D01G118300 chr5D 86.216 399 14 5 5566 5924 515689247 515688850 1.550000e-105 394.0
37 TraesCS1D01G118300 chr5D 87.281 228 26 3 5571 5797 410192713 410192938 2.120000e-64 257.0
38 TraesCS1D01G118300 chr3B 94.222 225 10 3 4985 5206 736001510 736001286 2.040000e-89 340.0
39 TraesCS1D01G118300 chr3B 92.340 235 13 4 4977 5206 146565497 146565731 4.430000e-86 329.0
40 TraesCS1D01G118300 chr3B 90.517 116 10 1 5208 5322 145363020 145363135 1.030000e-32 152.0
41 TraesCS1D01G118300 chr3B 100.000 81 0 0 5207 5287 146565702 146565782 3.700000e-32 150.0
42 TraesCS1D01G118300 chr3B 96.429 84 1 2 5207 5290 736001315 736001234 2.880000e-28 137.0
43 TraesCS1D01G118300 chr4B 90.431 209 10 6 5004 5206 45780590 45780386 3.520000e-67 267.0
44 TraesCS1D01G118300 chr4B 96.591 88 2 1 5203 5290 45780418 45780332 1.720000e-30 145.0
45 TraesCS1D01G118300 chr4B 87.500 56 3 4 5462 5517 654777119 654777170 1.780000e-05 62.1
46 TraesCS1D01G118300 chr5B 93.064 173 12 0 5624 5796 35177367 35177195 2.740000e-63 254.0
47 TraesCS1D01G118300 chr6B 91.351 185 13 3 5621 5803 77097057 77096874 3.540000e-62 250.0
48 TraesCS1D01G118300 chr3A 89.655 116 11 1 5208 5322 549265620 549265735 4.780000e-31 147.0
49 TraesCS1D01G118300 chr7D 74.894 235 44 10 5566 5799 577380297 577380077 6.320000e-15 93.5
50 TraesCS1D01G118300 chr7D 91.111 45 3 1 5453 5496 76970475 76970519 6.410000e-05 60.2
51 TraesCS1D01G118300 chr7D 86.538 52 5 2 5438 5487 522156980 522156929 8.290000e-04 56.5
52 TraesCS1D01G118300 chr7B 100.000 35 0 0 5451 5485 199113861 199113827 1.380000e-06 65.8
53 TraesCS1D01G118300 chr7B 100.000 35 0 0 5451 5485 611543517 611543483 1.380000e-06 65.8
54 TraesCS1D01G118300 chr4D 89.583 48 4 1 5446 5492 509837519 509837472 6.410000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G118300 chr1D 114152239 114158162 5923 False 1768.000000 10940 90.874286 1 5924 7 chr1D.!!$F1 5923
1 TraesCS1D01G118300 chr1B 174984896 174990665 5769 False 1087.444444 3916 91.288333 1 5561 9 chr1B.!!$F2 5560
2 TraesCS1D01G118300 chr1A 124476604 124482866 6262 False 1131.750000 3801 93.055125 331 5562 8 chr1A.!!$F1 5231

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
772 2337 0.106708 GACAGGTGAGCACACTCCAA 59.893 55.0 14.08 0.0 45.32 3.53 F
773 2338 0.546122 ACAGGTGAGCACACTCCAAA 59.454 50.0 14.08 0.0 45.32 3.28 F
2592 4184 0.328258 ATGTGGAAGCAGGGGTACAC 59.672 55.0 0.00 0.0 0.00 2.90 F
2903 4510 0.321996 AAGGAGAAGGAGTCCGTTGC 59.678 55.0 2.76 0.0 39.30 4.17 F
3111 4718 0.831307 AGTCCCCGCTGGTTAATCTC 59.169 55.0 0.00 0.0 34.77 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2237 3829 0.103208 GACATGGTCAGGCTCCGTAG 59.897 60.000 0.00 0.00 32.09 3.51 R
2734 4329 0.607489 GCCACATCAAGAGGTGCACT 60.607 55.000 17.98 2.27 41.31 4.40 R
3835 5442 0.739561 ATTACTCGGACAGGCGTCTC 59.260 55.000 0.00 0.00 42.21 3.36 R
4497 6104 1.078201 CGTCGCTATGCAACAGCTCA 61.078 55.000 18.32 5.43 36.86 4.26 R
5047 6655 1.774254 TGGCAAGGTTGAAAGAGGAGA 59.226 47.619 0.00 0.00 0.00 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.531206 GTCTCAAGCACCGTACTCATC 58.469 52.381 0.00 0.00 0.00 2.92
36 37 7.254252 CCGTACTCATCAAAGAAAATCAGCTAG 60.254 40.741 0.00 0.00 0.00 3.42
37 38 6.434018 ACTCATCAAAGAAAATCAGCTAGC 57.566 37.500 6.62 6.62 0.00 3.42
41 42 6.209192 TCATCAAAGAAAATCAGCTAGCCAAA 59.791 34.615 12.13 0.00 0.00 3.28
42 43 6.403866 TCAAAGAAAATCAGCTAGCCAAAA 57.596 33.333 12.13 0.00 0.00 2.44
44 45 6.925165 TCAAAGAAAATCAGCTAGCCAAAAAG 59.075 34.615 12.13 0.00 0.00 2.27
45 46 4.814147 AGAAAATCAGCTAGCCAAAAAGC 58.186 39.130 12.13 0.00 39.08 3.51
46 47 2.927553 AATCAGCTAGCCAAAAAGCG 57.072 45.000 12.13 0.00 43.63 4.68
47 48 2.113860 ATCAGCTAGCCAAAAAGCGA 57.886 45.000 12.13 0.00 43.63 4.93
75 90 1.386533 CTCTGGTGTGATCAATGCCC 58.613 55.000 0.00 0.00 0.00 5.36
76 91 0.392863 TCTGGTGTGATCAATGCCCG 60.393 55.000 0.00 0.00 0.00 6.13
118 134 1.609208 AAGAAATCAAGCACACGCCT 58.391 45.000 0.00 0.00 39.83 5.52
176 194 5.514169 TGCTTATCATGGAAACCAATACCA 58.486 37.500 0.00 0.00 36.95 3.25
182 200 6.528537 TCATGGAAACCAATACCATCTTTG 57.471 37.500 0.00 0.00 41.68 2.77
191 209 3.669939 ATACCATCTTTGGACTTGGGG 57.330 47.619 0.00 0.00 46.92 4.96
214 232 7.304497 GGAGTCTAATCTTATCCCAGCTTAA 57.696 40.000 0.00 0.00 0.00 1.85
215 233 7.912719 GGAGTCTAATCTTATCCCAGCTTAAT 58.087 38.462 0.00 0.00 0.00 1.40
216 234 7.821846 GGAGTCTAATCTTATCCCAGCTTAATG 59.178 40.741 0.00 0.00 0.00 1.90
217 235 7.164803 AGTCTAATCTTATCCCAGCTTAATGC 58.835 38.462 0.00 0.00 43.29 3.56
245 263 7.974501 AGTGTCGATTTGATACTTATCGAGTTT 59.025 33.333 6.65 0.00 45.70 2.66
283 535 5.365895 AGATTTATGGCTACCGTTTAGGAGT 59.634 40.000 0.00 0.00 45.00 3.85
450 1989 4.250431 GCACGCCACACACACACC 62.250 66.667 0.00 0.00 0.00 4.16
454 1993 3.582120 GCCACACACACACCCACG 61.582 66.667 0.00 0.00 0.00 4.94
455 1994 2.899838 CCACACACACACCCACGG 60.900 66.667 0.00 0.00 0.00 4.94
457 1996 4.102815 ACACACACACCCACGGCA 62.103 61.111 0.00 0.00 0.00 5.69
666 2230 2.350895 CACCAGTCCGGCATTCCA 59.649 61.111 0.00 0.00 39.03 3.53
667 2231 1.077501 CACCAGTCCGGCATTCCAT 60.078 57.895 0.00 0.00 39.03 3.41
668 2232 0.680921 CACCAGTCCGGCATTCCATT 60.681 55.000 0.00 0.00 39.03 3.16
669 2233 0.394352 ACCAGTCCGGCATTCCATTC 60.394 55.000 0.00 0.00 39.03 2.67
670 2234 1.103398 CCAGTCCGGCATTCCATTCC 61.103 60.000 0.00 0.00 0.00 3.01
772 2337 0.106708 GACAGGTGAGCACACTCCAA 59.893 55.000 14.08 0.00 45.32 3.53
773 2338 0.546122 ACAGGTGAGCACACTCCAAA 59.454 50.000 14.08 0.00 45.32 3.28
782 2347 2.073716 ACACTCCAAACCGTCCCCA 61.074 57.895 0.00 0.00 0.00 4.96
787 2352 3.966543 CAAACCGTCCCCAGGCCT 61.967 66.667 0.00 0.00 0.00 5.19
830 2395 1.199624 GTCGTGTCGTAACGGTTTGT 58.800 50.000 0.00 0.00 43.73 2.83
831 2396 2.380660 GTCGTGTCGTAACGGTTTGTA 58.619 47.619 0.00 0.00 43.73 2.41
1036 2604 2.040544 CCTTCGCCGCATCCACTTT 61.041 57.895 0.00 0.00 0.00 2.66
1191 2783 1.377594 GGTATCCGGCGGTTTGGTT 60.378 57.895 27.32 7.58 0.00 3.67
1465 3057 1.159664 AGAGAGGAGGGTGGCTTGT 59.840 57.895 0.00 0.00 0.00 3.16
1513 3105 4.704833 TGCCTGTGCCGGAGAAGC 62.705 66.667 5.05 0.41 36.33 3.86
1594 3186 2.223971 GCGGAGGTGAAATCTTCGGATA 60.224 50.000 0.00 0.00 34.07 2.59
1628 3220 1.962807 TGCTGATTTGGTGGTGAAAGG 59.037 47.619 0.00 0.00 0.00 3.11
1771 3363 0.961019 TGATGAGGTTGGTTTGCAGC 59.039 50.000 0.00 0.00 0.00 5.25
1867 3459 1.805945 GGCACTACAGAAGCGGTCG 60.806 63.158 0.00 0.00 0.00 4.79
1936 3528 1.836802 GTGAGATTCCTCCTGAGCCTT 59.163 52.381 0.00 0.00 38.66 4.35
1941 3533 3.903090 AGATTCCTCCTGAGCCTTATCAG 59.097 47.826 0.00 0.00 45.24 2.90
2013 3605 3.191162 CGGCTGATGGACTTGATGAAAAA 59.809 43.478 0.00 0.00 0.00 1.94
2089 3681 4.498241 TGAAGATCTCAAGGTGATGAACG 58.502 43.478 0.00 0.00 0.00 3.95
2126 3718 1.985895 ACCCAAGGCTGCTAGTAAACT 59.014 47.619 0.00 0.00 0.00 2.66
2138 3730 4.452455 TGCTAGTAAACTTTCTGCTGAAGC 59.548 41.667 6.13 4.00 42.50 3.86
2152 3744 3.008813 TGCTGAAGCTCCTCTGAAAGAAT 59.991 43.478 3.61 0.00 42.31 2.40
2179 3771 1.340568 GGGATACTACAGAAGCGGTCC 59.659 57.143 0.00 0.00 0.00 4.46
2233 3825 1.283321 AGGAATTGGAGGAAGGTGAGC 59.717 52.381 0.00 0.00 0.00 4.26
2283 3875 5.308825 CAAGAGAACCCAGTTACTCACAAT 58.691 41.667 0.00 0.00 32.59 2.71
2353 3945 1.133025 CAATGGTTGATGCGGAACCTC 59.867 52.381 11.40 0.00 43.00 3.85
2355 3947 1.749258 GGTTGATGCGGAACCTCCC 60.749 63.158 0.00 0.00 39.94 4.30
2356 3948 1.299976 GTTGATGCGGAACCTCCCT 59.700 57.895 0.00 0.00 31.13 4.20
2395 3987 3.584406 TGAGAAGATCCCTGTGAACATGT 59.416 43.478 0.00 0.00 0.00 3.21
2454 4046 4.940046 GCTGAAGATCTCAAGGTGATGAAA 59.060 41.667 0.00 0.00 32.17 2.69
2484 4076 1.538687 GCAATTCACCCAAGGCTGCT 61.539 55.000 0.00 0.00 0.00 4.24
2485 4077 1.838112 CAATTCACCCAAGGCTGCTA 58.162 50.000 0.00 0.00 0.00 3.49
2592 4184 0.328258 ATGTGGAAGCAGGGGTACAC 59.672 55.000 0.00 0.00 0.00 2.90
2711 4306 8.766476 TGAAGATCCTCTGAAAGAATATCTTGT 58.234 33.333 14.06 0.00 46.30 3.16
2734 4329 7.732025 TGTGGATAAGAAAGTGTCTGAAAGTA 58.268 34.615 0.00 0.00 36.40 2.24
2740 4347 4.811557 AGAAAGTGTCTGAAAGTAGTGCAC 59.188 41.667 9.40 9.40 34.29 4.57
2757 4364 1.376424 ACCTCTTGATGTGGCAGCG 60.376 57.895 0.00 0.00 32.83 5.18
2769 4376 4.109675 GCAGCGGGGGTACATGGT 62.110 66.667 0.00 0.00 0.00 3.55
2788 4395 2.451132 GTGACGGTATCATGAGACGTG 58.549 52.381 21.65 15.55 40.28 4.49
2816 4423 8.125448 GGTATCATTCACAGCTAGAAAAACATC 58.875 37.037 5.04 0.00 0.00 3.06
2847 4454 6.006449 ACCTGTTGAAGCAAATCATAAGTCT 58.994 36.000 0.00 0.00 0.00 3.24
2903 4510 0.321996 AAGGAGAAGGAGTCCGTTGC 59.678 55.000 2.76 0.00 39.30 4.17
2930 4537 1.803289 GCGAATCCTTTGCTCCCAC 59.197 57.895 0.00 0.00 37.09 4.61
2956 4563 8.947115 CGAAGAAGTTAAAGATAAAAGGTCCAT 58.053 33.333 0.00 0.00 0.00 3.41
2974 4581 9.620259 AAGGTCCATCTCAAAGTAAATATCTTC 57.380 33.333 0.00 0.00 0.00 2.87
2976 4583 7.445707 GGTCCATCTCAAAGTAAATATCTTCCC 59.554 40.741 0.00 0.00 0.00 3.97
2977 4584 7.993183 GTCCATCTCAAAGTAAATATCTTCCCA 59.007 37.037 0.00 0.00 0.00 4.37
2978 4585 8.727149 TCCATCTCAAAGTAAATATCTTCCCAT 58.273 33.333 0.00 0.00 0.00 4.00
2979 4586 8.790718 CCATCTCAAAGTAAATATCTTCCCATG 58.209 37.037 0.00 0.00 0.00 3.66
2980 4587 9.565090 CATCTCAAAGTAAATATCTTCCCATGA 57.435 33.333 0.00 0.00 0.00 3.07
2991 4598 9.887862 AAATATCTTCCCATGAATACCATTTCT 57.112 29.630 0.00 0.00 31.94 2.52
2993 4600 9.965902 ATATCTTCCCATGAATACCATTTCTAC 57.034 33.333 0.00 0.00 31.94 2.59
2994 4601 7.206789 TCTTCCCATGAATACCATTTCTACA 57.793 36.000 0.00 0.00 31.94 2.74
2995 4602 7.815383 TCTTCCCATGAATACCATTTCTACAT 58.185 34.615 0.00 0.00 31.94 2.29
2996 4603 7.939039 TCTTCCCATGAATACCATTTCTACATC 59.061 37.037 0.00 0.00 31.94 3.06
2997 4604 7.392766 TCCCATGAATACCATTTCTACATCT 57.607 36.000 0.00 0.00 31.94 2.90
2998 4605 7.226441 TCCCATGAATACCATTTCTACATCTG 58.774 38.462 0.00 0.00 31.94 2.90
2999 4606 7.000472 CCCATGAATACCATTTCTACATCTGT 59.000 38.462 0.00 0.00 31.94 3.41
3000 4607 8.156820 CCCATGAATACCATTTCTACATCTGTA 58.843 37.037 0.00 0.00 31.94 2.74
3001 4608 9.730705 CCATGAATACCATTTCTACATCTGTAT 57.269 33.333 0.00 0.00 31.94 2.29
3004 4611 9.056005 TGAATACCATTTCTACATCTGTATTGC 57.944 33.333 0.00 0.00 30.10 3.56
3005 4612 8.978874 AATACCATTTCTACATCTGTATTGCA 57.021 30.769 0.00 0.00 0.00 4.08
3006 4613 9.578576 AATACCATTTCTACATCTGTATTGCAT 57.421 29.630 0.00 0.00 0.00 3.96
3008 4615 8.613060 ACCATTTCTACATCTGTATTGCATAG 57.387 34.615 0.00 0.00 0.00 2.23
3073 4680 9.582431 AAGATGATGAAGTTTTGAATGCAATAG 57.418 29.630 0.00 0.00 33.25 1.73
3097 4704 5.643379 TGTTGAAGCAAATCATAAGTCCC 57.357 39.130 0.00 0.00 0.00 4.46
3111 4718 0.831307 AGTCCCCGCTGGTTAATCTC 59.169 55.000 0.00 0.00 34.77 2.75
3137 4744 3.290710 GACCATGTTCTATGGGCAATGT 58.709 45.455 6.90 0.00 46.48 2.71
3202 4809 8.731605 CCAGGAAGAAGTTAAAGATAAAAGGTC 58.268 37.037 0.00 0.00 0.00 3.85
3252 4859 8.593945 TGAATACCATTTCTAGCAAGGAAAAT 57.406 30.769 3.61 0.00 36.47 1.82
3442 5049 7.195374 AGGTTTCAGTTTATATGCAGGACTA 57.805 36.000 0.00 0.00 0.00 2.59
3705 5312 2.851263 TTGTTGCGTCTGGAGGTTAT 57.149 45.000 0.00 0.00 0.00 1.89
3835 5442 6.095377 GCCCTGAAGAATTGTATCAAAACAG 58.905 40.000 0.00 0.00 0.00 3.16
4453 6060 1.916181 CAGGTTGGGGTGTAAGATCCT 59.084 52.381 0.00 0.00 0.00 3.24
4497 6104 6.260936 GCAGCTTTATATGTGAGTATGTTGGT 59.739 38.462 0.00 0.00 0.00 3.67
4767 6374 1.872952 CATGACGACAAAAGAGTGCCA 59.127 47.619 0.00 0.00 0.00 4.92
4944 6551 3.075148 AGGCGTAGAAGGCTTTTTCTTC 58.925 45.455 0.00 0.00 45.21 2.87
5047 6655 4.961438 AAATCCTTTGGAATGCTGTTGT 57.039 36.364 0.00 0.00 34.34 3.32
5155 6763 9.219603 CTAAAGAGGTTGTGATTCTGTTATTCA 57.780 33.333 0.00 0.00 0.00 2.57
5215 6823 8.942338 CAATTTCATTGTGAATCCTCATGATT 57.058 30.769 0.00 0.00 39.60 2.57
5304 6912 5.304614 TGCAGGATAGAACTATGGAGGTAAC 59.695 44.000 0.00 0.00 0.00 2.50
5398 7006 3.057033 CCATCCTGAACTTGAAAGGCTTG 60.057 47.826 0.00 0.00 0.00 4.01
5524 7136 6.175471 TCAGTTCATGTATGCATTTCTCTGT 58.825 36.000 3.54 0.00 31.99 3.41
5562 7174 4.081972 ACAGACATGCTATCGGTGATATCC 60.082 45.833 0.00 0.00 0.00 2.59
5563 7175 4.082026 CAGACATGCTATCGGTGATATCCA 60.082 45.833 0.00 0.00 0.00 3.41
5564 7176 4.159321 AGACATGCTATCGGTGATATCCAG 59.841 45.833 0.00 0.00 0.00 3.86
5565 7177 4.089361 ACATGCTATCGGTGATATCCAGA 58.911 43.478 0.00 0.00 0.00 3.86
5566 7178 4.713814 ACATGCTATCGGTGATATCCAGAT 59.286 41.667 0.00 6.23 0.00 2.90
5567 7179 4.991153 TGCTATCGGTGATATCCAGATC 57.009 45.455 0.00 0.00 0.00 2.75
5568 7180 3.701542 TGCTATCGGTGATATCCAGATCC 59.298 47.826 0.00 0.88 0.00 3.36
5569 7181 3.701542 GCTATCGGTGATATCCAGATCCA 59.298 47.826 0.00 0.00 0.00 3.41
5570 7182 4.202101 GCTATCGGTGATATCCAGATCCAG 60.202 50.000 0.00 1.38 0.00 3.86
5571 7183 3.525800 TCGGTGATATCCAGATCCAGA 57.474 47.619 0.00 0.00 0.00 3.86
5572 7184 4.053009 TCGGTGATATCCAGATCCAGAT 57.947 45.455 0.00 1.13 0.00 2.90
5573 7185 5.193099 TCGGTGATATCCAGATCCAGATA 57.807 43.478 0.00 5.10 0.00 1.98
5574 7186 5.770919 TCGGTGATATCCAGATCCAGATAT 58.229 41.667 12.64 12.64 38.18 1.63
5575 7187 6.911308 TCGGTGATATCCAGATCCAGATATA 58.089 40.000 12.73 3.14 36.14 0.86
5576 7188 7.530435 TCGGTGATATCCAGATCCAGATATAT 58.470 38.462 12.73 0.00 36.14 0.86
5577 7189 7.449704 TCGGTGATATCCAGATCCAGATATATG 59.550 40.741 12.73 0.00 36.14 1.78
5578 7190 7.232330 CGGTGATATCCAGATCCAGATATATGT 59.768 40.741 12.73 0.00 36.14 2.29
5579 7191 8.932610 GGTGATATCCAGATCCAGATATATGTT 58.067 37.037 12.73 0.00 36.14 2.71
5585 7197 8.138928 TCCAGATCCAGATATATGTTAGTTGG 57.861 38.462 0.00 0.00 0.00 3.77
5586 7198 7.180946 TCCAGATCCAGATATATGTTAGTTGGG 59.819 40.741 0.00 0.00 0.00 4.12
5587 7199 7.180946 CCAGATCCAGATATATGTTAGTTGGGA 59.819 40.741 0.00 0.00 0.00 4.37
5588 7200 8.256605 CAGATCCAGATATATGTTAGTTGGGAG 58.743 40.741 0.00 0.00 0.00 4.30
5589 7201 8.180165 AGATCCAGATATATGTTAGTTGGGAGA 58.820 37.037 0.00 0.00 0.00 3.71
5590 7202 8.742125 ATCCAGATATATGTTAGTTGGGAGAA 57.258 34.615 0.00 0.00 0.00 2.87
5591 7203 7.963532 TCCAGATATATGTTAGTTGGGAGAAC 58.036 38.462 0.00 0.00 0.00 3.01
5592 7204 7.567250 TCCAGATATATGTTAGTTGGGAGAACA 59.433 37.037 0.00 0.00 37.47 3.18
5593 7205 8.378565 CCAGATATATGTTAGTTGGGAGAACAT 58.621 37.037 5.00 5.00 44.07 2.71
5594 7206 9.212641 CAGATATATGTTAGTTGGGAGAACATG 57.787 37.037 9.20 0.00 42.33 3.21
5595 7207 9.159254 AGATATATGTTAGTTGGGAGAACATGA 57.841 33.333 0.00 0.00 42.33 3.07
5596 7208 9.778741 GATATATGTTAGTTGGGAGAACATGAA 57.221 33.333 0.00 0.00 42.33 2.57
5597 7209 7.865706 ATATGTTAGTTGGGAGAACATGAAC 57.134 36.000 0.00 0.00 42.33 3.18
5598 7210 4.062293 TGTTAGTTGGGAGAACATGAACG 58.938 43.478 0.00 0.00 0.00 3.95
5599 7211 2.930826 AGTTGGGAGAACATGAACGT 57.069 45.000 0.00 0.00 0.00 3.99
5600 7212 3.208747 AGTTGGGAGAACATGAACGTT 57.791 42.857 0.00 0.00 0.00 3.99
5601 7213 3.139077 AGTTGGGAGAACATGAACGTTC 58.861 45.455 21.42 21.42 44.63 3.95
5610 7222 5.659048 GAACATGAACGTTCTCAGAGTTT 57.341 39.130 27.32 11.53 41.70 2.66
5611 7223 6.764877 GAACATGAACGTTCTCAGAGTTTA 57.235 37.500 27.32 5.77 41.70 2.01
5612 7224 6.771188 AACATGAACGTTCTCAGAGTTTAG 57.229 37.500 27.32 8.56 28.61 1.85
5613 7225 4.686554 ACATGAACGTTCTCAGAGTTTAGC 59.313 41.667 27.32 0.00 0.00 3.09
5614 7226 3.305964 TGAACGTTCTCAGAGTTTAGCG 58.694 45.455 27.32 0.00 0.00 4.26
5615 7227 3.004002 TGAACGTTCTCAGAGTTTAGCGA 59.996 43.478 27.32 0.52 0.00 4.93
5616 7228 3.637998 ACGTTCTCAGAGTTTAGCGAA 57.362 42.857 0.00 0.00 0.00 4.70
5617 7229 4.175787 ACGTTCTCAGAGTTTAGCGAAT 57.824 40.909 0.00 0.00 0.00 3.34
5618 7230 5.306532 ACGTTCTCAGAGTTTAGCGAATA 57.693 39.130 0.00 0.00 0.00 1.75
5619 7231 5.892568 ACGTTCTCAGAGTTTAGCGAATAT 58.107 37.500 0.00 0.00 0.00 1.28
5620 7232 6.331061 ACGTTCTCAGAGTTTAGCGAATATT 58.669 36.000 0.00 0.00 0.00 1.28
5621 7233 6.253727 ACGTTCTCAGAGTTTAGCGAATATTG 59.746 38.462 0.00 0.00 0.00 1.90
5622 7234 6.291849 CGTTCTCAGAGTTTAGCGAATATTGG 60.292 42.308 0.00 0.00 0.00 3.16
5623 7235 5.050490 TCTCAGAGTTTAGCGAATATTGGC 58.950 41.667 14.01 14.01 0.00 4.52
5624 7236 4.127171 TCAGAGTTTAGCGAATATTGGCC 58.873 43.478 17.64 0.00 31.78 5.36
5625 7237 3.059597 CAGAGTTTAGCGAATATTGGCCG 60.060 47.826 17.64 4.87 31.78 6.13
5626 7238 2.870411 GAGTTTAGCGAATATTGGCCGT 59.130 45.455 17.64 4.36 31.78 5.68
5627 7239 2.870411 AGTTTAGCGAATATTGGCCGTC 59.130 45.455 17.64 7.41 31.78 4.79
5628 7240 1.493772 TTAGCGAATATTGGCCGTCG 58.506 50.000 17.64 3.49 36.59 5.12
5629 7241 0.319211 TAGCGAATATTGGCCGTCGG 60.319 55.000 17.64 6.99 34.13 4.79
5630 7242 1.593209 GCGAATATTGGCCGTCGGA 60.593 57.895 17.49 0.00 34.13 4.55
5631 7243 0.949105 GCGAATATTGGCCGTCGGAT 60.949 55.000 17.49 1.83 34.13 4.18
5632 7244 1.068474 CGAATATTGGCCGTCGGATC 58.932 55.000 17.49 6.79 0.00 3.36
5633 7245 1.336887 CGAATATTGGCCGTCGGATCT 60.337 52.381 17.49 0.00 0.00 2.75
5634 7246 2.069273 GAATATTGGCCGTCGGATCTG 58.931 52.381 17.49 0.00 0.00 2.90
5635 7247 0.321671 ATATTGGCCGTCGGATCTGG 59.678 55.000 17.49 0.00 0.00 3.86
5636 7248 1.046472 TATTGGCCGTCGGATCTGGT 61.046 55.000 17.49 0.00 0.00 4.00
5637 7249 1.910580 ATTGGCCGTCGGATCTGGTT 61.911 55.000 17.49 0.00 0.00 3.67
5638 7250 2.511600 GGCCGTCGGATCTGGTTG 60.512 66.667 17.49 0.00 0.00 3.77
5639 7251 3.195698 GCCGTCGGATCTGGTTGC 61.196 66.667 17.49 0.00 0.00 4.17
5640 7252 2.579201 CCGTCGGATCTGGTTGCT 59.421 61.111 4.91 0.00 0.00 3.91
5641 7253 1.079127 CCGTCGGATCTGGTTGCTT 60.079 57.895 4.91 0.00 0.00 3.91
5642 7254 1.361668 CCGTCGGATCTGGTTGCTTG 61.362 60.000 4.91 0.00 0.00 4.01
5643 7255 0.389817 CGTCGGATCTGGTTGCTTGA 60.390 55.000 0.62 0.00 0.00 3.02
5644 7256 1.740380 CGTCGGATCTGGTTGCTTGAT 60.740 52.381 0.62 0.00 0.00 2.57
5645 7257 1.936547 GTCGGATCTGGTTGCTTGATC 59.063 52.381 0.62 0.00 36.72 2.92
5646 7258 0.933097 CGGATCTGGTTGCTTGATCG 59.067 55.000 0.00 0.00 37.91 3.69
5647 7259 1.303309 GGATCTGGTTGCTTGATCGG 58.697 55.000 0.00 0.00 37.91 4.18
5648 7260 1.134401 GGATCTGGTTGCTTGATCGGA 60.134 52.381 0.00 0.00 37.91 4.55
5649 7261 2.486191 GGATCTGGTTGCTTGATCGGAT 60.486 50.000 0.00 0.00 37.91 4.18
5650 7262 2.315925 TCTGGTTGCTTGATCGGATC 57.684 50.000 11.07 11.07 0.00 3.36
5651 7263 1.833630 TCTGGTTGCTTGATCGGATCT 59.166 47.619 18.16 0.00 0.00 2.75
5652 7264 2.159043 TCTGGTTGCTTGATCGGATCTC 60.159 50.000 18.16 8.56 0.00 2.75
5653 7265 1.212616 GGTTGCTTGATCGGATCTCG 58.787 55.000 18.16 10.31 40.90 4.04
5654 7266 1.212616 GTTGCTTGATCGGATCTCGG 58.787 55.000 18.16 9.52 39.77 4.63
5655 7267 0.530650 TTGCTTGATCGGATCTCGGC 60.531 55.000 18.16 17.44 39.77 5.54
5656 7268 1.666234 GCTTGATCGGATCTCGGCC 60.666 63.158 18.16 0.00 39.77 6.13
5663 7275 3.296054 GGATCTCGGCCGTCGGAT 61.296 66.667 27.15 24.51 39.77 4.18
5664 7276 2.255856 GATCTCGGCCGTCGGATC 59.744 66.667 27.15 27.48 37.90 3.36
5665 7277 2.518587 ATCTCGGCCGTCGGATCA 60.519 61.111 27.15 1.93 39.77 2.92
5666 7278 2.071844 GATCTCGGCCGTCGGATCAA 62.072 60.000 31.92 13.82 41.18 2.57
5667 7279 2.076622 ATCTCGGCCGTCGGATCAAG 62.077 60.000 27.15 12.70 39.77 3.02
5668 7280 3.064987 CTCGGCCGTCGGATCAAGT 62.065 63.158 27.15 0.00 39.77 3.16
5669 7281 2.582498 CGGCCGTCGGATCAAGTC 60.582 66.667 19.50 0.00 34.75 3.01
5670 7282 2.202892 GGCCGTCGGATCAAGTCC 60.203 66.667 17.49 0.00 44.10 3.85
5671 7283 2.722201 GGCCGTCGGATCAAGTCCT 61.722 63.158 17.49 0.00 45.46 3.85
5672 7284 1.218316 GCCGTCGGATCAAGTCCTT 59.782 57.895 17.49 0.00 45.46 3.36
5673 7285 1.084370 GCCGTCGGATCAAGTCCTTG 61.084 60.000 17.49 0.47 45.46 3.61
5674 7286 0.460284 CCGTCGGATCAAGTCCTTGG 60.460 60.000 4.91 0.00 45.46 3.61
5675 7287 0.530744 CGTCGGATCAAGTCCTTGGA 59.469 55.000 7.16 0.00 45.46 3.53
5676 7288 1.067142 CGTCGGATCAAGTCCTTGGAA 60.067 52.381 7.16 0.00 45.46 3.53
5677 7289 2.622436 GTCGGATCAAGTCCTTGGAAG 58.378 52.381 7.16 0.00 45.46 3.46
5678 7290 2.233922 GTCGGATCAAGTCCTTGGAAGA 59.766 50.000 7.16 0.65 45.46 2.87
5679 7291 2.233922 TCGGATCAAGTCCTTGGAAGAC 59.766 50.000 7.16 0.00 45.46 3.01
5680 7292 2.678190 CGGATCAAGTCCTTGGAAGACC 60.678 54.545 7.16 3.92 45.46 3.85
5681 7293 2.573915 GGATCAAGTCCTTGGAAGACCT 59.426 50.000 7.16 0.00 44.16 3.85
5682 7294 3.369997 GGATCAAGTCCTTGGAAGACCTC 60.370 52.174 7.16 0.00 44.16 3.85
5683 7295 1.618837 TCAAGTCCTTGGAAGACCTCG 59.381 52.381 7.16 0.00 40.78 4.63
5684 7296 0.977395 AAGTCCTTGGAAGACCTCGG 59.023 55.000 0.00 0.00 34.67 4.63
5685 7297 1.079057 GTCCTTGGAAGACCTCGGC 60.079 63.158 0.00 0.00 37.04 5.54
5686 7298 2.269241 CCTTGGAAGACCTCGGCC 59.731 66.667 0.00 0.00 37.04 6.13
5687 7299 2.125512 CTTGGAAGACCTCGGCCG 60.126 66.667 22.12 22.12 37.04 6.13
5688 7300 2.920912 TTGGAAGACCTCGGCCGT 60.921 61.111 27.15 5.51 37.04 5.68
5689 7301 2.837371 CTTGGAAGACCTCGGCCGTC 62.837 65.000 27.15 16.05 37.04 4.79
5690 7302 4.493747 GGAAGACCTCGGCCGTCG 62.494 72.222 27.15 18.48 40.90 5.12
5691 7303 4.493747 GAAGACCTCGGCCGTCGG 62.494 72.222 27.15 27.00 39.77 4.79
5693 7305 4.816984 AGACCTCGGCCGTCGGAT 62.817 66.667 32.47 21.21 39.77 4.18
5694 7306 4.267503 GACCTCGGCCGTCGGATC 62.268 72.222 32.47 23.44 39.77 3.36
5697 7309 3.884350 CTCGGCCGTCGGATCGAA 61.884 66.667 27.15 0.17 37.72 3.71
5698 7310 3.808771 CTCGGCCGTCGGATCGAAG 62.809 68.421 27.15 7.77 37.72 3.79
5699 7311 3.884350 CGGCCGTCGGATCGAAGA 61.884 66.667 19.50 0.00 37.53 2.87
5700 7312 2.026301 GGCCGTCGGATCGAAGAG 59.974 66.667 17.49 0.00 43.63 2.85
5701 7313 2.026301 GCCGTCGGATCGAAGAGG 59.974 66.667 17.49 4.57 43.63 3.69
5702 7314 2.772691 GCCGTCGGATCGAAGAGGT 61.773 63.158 17.49 0.00 43.63 3.85
5703 7315 1.064296 CCGTCGGATCGAAGAGGTG 59.936 63.158 4.91 0.00 43.63 4.00
5704 7316 1.654954 CCGTCGGATCGAAGAGGTGT 61.655 60.000 4.91 0.00 43.63 4.16
5705 7317 0.248134 CGTCGGATCGAAGAGGTGTC 60.248 60.000 0.00 0.00 43.63 3.67
5706 7318 0.809385 GTCGGATCGAAGAGGTGTCA 59.191 55.000 0.00 0.00 43.63 3.58
5707 7319 0.809385 TCGGATCGAAGAGGTGTCAC 59.191 55.000 0.00 0.00 43.63 3.67
5708 7320 0.811915 CGGATCGAAGAGGTGTCACT 59.188 55.000 2.35 0.00 43.63 3.41
5709 7321 1.468224 CGGATCGAAGAGGTGTCACTG 60.468 57.143 2.35 0.00 43.63 3.66
5710 7322 1.546476 GGATCGAAGAGGTGTCACTGT 59.454 52.381 2.35 0.00 43.63 3.55
5711 7323 2.028930 GGATCGAAGAGGTGTCACTGTT 60.029 50.000 2.35 0.00 43.63 3.16
5712 7324 2.509052 TCGAAGAGGTGTCACTGTTG 57.491 50.000 2.35 0.00 0.00 3.33
5713 7325 0.861837 CGAAGAGGTGTCACTGTTGC 59.138 55.000 2.35 0.00 0.00 4.17
5714 7326 1.806247 CGAAGAGGTGTCACTGTTGCA 60.806 52.381 2.35 0.00 0.00 4.08
5715 7327 2.288666 GAAGAGGTGTCACTGTTGCAA 58.711 47.619 2.35 0.00 0.00 4.08
5716 7328 2.645838 AGAGGTGTCACTGTTGCAAT 57.354 45.000 0.59 0.00 0.00 3.56
5717 7329 2.224606 AGAGGTGTCACTGTTGCAATG 58.775 47.619 0.59 1.21 0.00 2.82
5718 7330 2.158769 AGAGGTGTCACTGTTGCAATGA 60.159 45.455 0.59 0.00 0.00 2.57
5719 7331 2.618241 GAGGTGTCACTGTTGCAATGAA 59.382 45.455 0.59 0.00 0.00 2.57
5720 7332 3.225104 AGGTGTCACTGTTGCAATGAAT 58.775 40.909 0.59 0.00 0.00 2.57
5721 7333 4.397420 AGGTGTCACTGTTGCAATGAATA 58.603 39.130 0.59 0.00 0.00 1.75
5722 7334 4.456911 AGGTGTCACTGTTGCAATGAATAG 59.543 41.667 0.59 0.00 0.00 1.73
5723 7335 4.216257 GGTGTCACTGTTGCAATGAATAGT 59.784 41.667 0.59 0.00 0.00 2.12
5724 7336 5.278463 GGTGTCACTGTTGCAATGAATAGTT 60.278 40.000 0.59 0.00 0.00 2.24
5725 7337 6.072728 GGTGTCACTGTTGCAATGAATAGTTA 60.073 38.462 0.59 0.00 0.00 2.24
5726 7338 6.797033 GTGTCACTGTTGCAATGAATAGTTAC 59.203 38.462 0.59 5.49 0.00 2.50
5727 7339 6.072728 TGTCACTGTTGCAATGAATAGTTACC 60.073 38.462 0.59 0.00 0.00 2.85
5728 7340 6.149474 GTCACTGTTGCAATGAATAGTTACCT 59.851 38.462 0.59 0.00 0.00 3.08
5729 7341 6.371548 TCACTGTTGCAATGAATAGTTACCTC 59.628 38.462 0.59 0.00 0.00 3.85
5730 7342 6.372659 CACTGTTGCAATGAATAGTTACCTCT 59.627 38.462 0.59 0.00 0.00 3.69
5731 7343 6.595716 ACTGTTGCAATGAATAGTTACCTCTC 59.404 38.462 0.59 0.00 0.00 3.20
5732 7344 5.580691 TGTTGCAATGAATAGTTACCTCTCG 59.419 40.000 0.59 0.00 0.00 4.04
5733 7345 4.119862 TGCAATGAATAGTTACCTCTCGC 58.880 43.478 0.00 0.00 0.00 5.03
5734 7346 4.141937 TGCAATGAATAGTTACCTCTCGCT 60.142 41.667 0.00 0.00 0.00 4.93
5735 7347 4.210120 GCAATGAATAGTTACCTCTCGCTG 59.790 45.833 0.00 0.00 0.00 5.18
5736 7348 5.352284 CAATGAATAGTTACCTCTCGCTGT 58.648 41.667 0.00 0.00 0.00 4.40
5737 7349 6.504398 CAATGAATAGTTACCTCTCGCTGTA 58.496 40.000 0.00 0.00 0.00 2.74
5738 7350 6.710597 ATGAATAGTTACCTCTCGCTGTAA 57.289 37.500 0.00 0.00 0.00 2.41
5739 7351 6.519679 TGAATAGTTACCTCTCGCTGTAAA 57.480 37.500 0.00 0.00 0.00 2.01
5740 7352 6.927416 TGAATAGTTACCTCTCGCTGTAAAA 58.073 36.000 0.00 0.00 0.00 1.52
5741 7353 7.380536 TGAATAGTTACCTCTCGCTGTAAAAA 58.619 34.615 0.00 0.00 0.00 1.94
5742 7354 8.038944 TGAATAGTTACCTCTCGCTGTAAAAAT 58.961 33.333 0.00 0.00 0.00 1.82
5743 7355 8.421673 AATAGTTACCTCTCGCTGTAAAAATC 57.578 34.615 0.00 0.00 0.00 2.17
5744 7356 6.038997 AGTTACCTCTCGCTGTAAAAATCT 57.961 37.500 0.00 0.00 0.00 2.40
5745 7357 6.100668 AGTTACCTCTCGCTGTAAAAATCTC 58.899 40.000 0.00 0.00 0.00 2.75
5746 7358 4.537135 ACCTCTCGCTGTAAAAATCTCA 57.463 40.909 0.00 0.00 0.00 3.27
5747 7359 5.091261 ACCTCTCGCTGTAAAAATCTCAT 57.909 39.130 0.00 0.00 0.00 2.90
5748 7360 4.872691 ACCTCTCGCTGTAAAAATCTCATG 59.127 41.667 0.00 0.00 0.00 3.07
5749 7361 4.260538 CCTCTCGCTGTAAAAATCTCATGC 60.261 45.833 0.00 0.00 0.00 4.06
5750 7362 3.623060 TCTCGCTGTAAAAATCTCATGCC 59.377 43.478 0.00 0.00 0.00 4.40
5751 7363 3.342719 TCGCTGTAAAAATCTCATGCCA 58.657 40.909 0.00 0.00 0.00 4.92
5752 7364 3.126858 TCGCTGTAAAAATCTCATGCCAC 59.873 43.478 0.00 0.00 0.00 5.01
5753 7365 3.731867 CGCTGTAAAAATCTCATGCCACC 60.732 47.826 0.00 0.00 0.00 4.61
5754 7366 3.731867 GCTGTAAAAATCTCATGCCACCG 60.732 47.826 0.00 0.00 0.00 4.94
5755 7367 2.163412 TGTAAAAATCTCATGCCACCGC 59.837 45.455 0.00 0.00 0.00 5.68
5756 7368 0.171007 AAAAATCTCATGCCACCGCG 59.829 50.000 0.00 0.00 38.08 6.46
5757 7369 0.960364 AAAATCTCATGCCACCGCGT 60.960 50.000 4.92 0.00 38.08 6.01
5762 7374 3.496711 CATGCCACCGCGTGTAAT 58.503 55.556 4.92 0.00 45.38 1.89
5763 7375 1.800032 CATGCCACCGCGTGTAATT 59.200 52.632 4.92 0.00 45.38 1.40
5764 7376 0.248054 CATGCCACCGCGTGTAATTC 60.248 55.000 4.92 0.00 45.38 2.17
5765 7377 0.392461 ATGCCACCGCGTGTAATTCT 60.392 50.000 4.92 0.00 38.08 2.40
5766 7378 1.017177 TGCCACCGCGTGTAATTCTC 61.017 55.000 4.92 0.00 38.08 2.87
5767 7379 1.995991 CCACCGCGTGTAATTCTCG 59.004 57.895 4.92 0.00 36.33 4.04
5768 7380 0.734942 CCACCGCGTGTAATTCTCGT 60.735 55.000 4.92 0.00 35.78 4.18
5769 7381 0.365523 CACCGCGTGTAATTCTCGTG 59.634 55.000 4.92 0.00 41.28 4.35
5770 7382 1.343821 CCGCGTGTAATTCTCGTGC 59.656 57.895 4.92 0.00 40.61 5.34
5771 7383 1.343821 CGCGTGTAATTCTCGTGCC 59.656 57.895 0.00 0.00 36.90 5.01
5772 7384 1.713830 GCGTGTAATTCTCGTGCCC 59.286 57.895 0.00 0.00 35.78 5.36
5773 7385 1.702491 GCGTGTAATTCTCGTGCCCC 61.702 60.000 0.00 0.00 35.78 5.80
5774 7386 1.418342 CGTGTAATTCTCGTGCCCCG 61.418 60.000 0.00 0.00 38.13 5.73
5775 7387 1.448893 TGTAATTCTCGTGCCCCGC 60.449 57.895 0.00 0.00 36.19 6.13
5776 7388 2.178235 GTAATTCTCGTGCCCCGCC 61.178 63.158 0.00 0.00 36.19 6.13
5777 7389 2.661066 TAATTCTCGTGCCCCGCCA 61.661 57.895 0.00 0.00 36.19 5.69
5778 7390 2.186602 TAATTCTCGTGCCCCGCCAA 62.187 55.000 0.00 0.00 36.19 4.52
5779 7391 3.976701 ATTCTCGTGCCCCGCCAAG 62.977 63.158 0.00 0.00 36.19 3.61
5797 7409 4.815269 CCAAGGGCATTTTCGTAATTTCA 58.185 39.130 0.00 0.00 0.00 2.69
5798 7410 4.625311 CCAAGGGCATTTTCGTAATTTCAC 59.375 41.667 0.00 0.00 0.00 3.18
5799 7411 5.226396 CAAGGGCATTTTCGTAATTTCACA 58.774 37.500 0.00 0.00 0.00 3.58
5800 7412 5.659440 AGGGCATTTTCGTAATTTCACAT 57.341 34.783 0.00 0.00 0.00 3.21
5801 7413 6.036577 AGGGCATTTTCGTAATTTCACATT 57.963 33.333 0.00 0.00 0.00 2.71
5802 7414 5.868801 AGGGCATTTTCGTAATTTCACATTG 59.131 36.000 0.00 0.00 0.00 2.82
5803 7415 5.637387 GGGCATTTTCGTAATTTCACATTGT 59.363 36.000 0.00 0.00 0.00 2.71
5804 7416 6.147000 GGGCATTTTCGTAATTTCACATTGTT 59.853 34.615 0.00 0.00 0.00 2.83
5805 7417 7.008859 GGCATTTTCGTAATTTCACATTGTTG 58.991 34.615 0.00 0.00 0.00 3.33
5806 7418 7.008859 GCATTTTCGTAATTTCACATTGTTGG 58.991 34.615 0.00 0.00 0.00 3.77
5807 7419 7.508965 CATTTTCGTAATTTCACATTGTTGGG 58.491 34.615 0.00 0.00 0.00 4.12
5808 7420 6.392625 TTTCGTAATTTCACATTGTTGGGA 57.607 33.333 0.00 0.00 31.90 4.37
5809 7421 6.392625 TTCGTAATTTCACATTGTTGGGAA 57.607 33.333 0.00 0.00 43.52 3.97
5815 7427 3.025322 TCACATTGTTGGGAAAGTGGT 57.975 42.857 0.00 0.00 30.42 4.16
5816 7428 3.370104 TCACATTGTTGGGAAAGTGGTT 58.630 40.909 0.00 0.00 30.42 3.67
5817 7429 3.131933 TCACATTGTTGGGAAAGTGGTTG 59.868 43.478 0.00 0.00 30.42 3.77
5818 7430 3.131933 CACATTGTTGGGAAAGTGGTTGA 59.868 43.478 0.00 0.00 0.00 3.18
5819 7431 3.384467 ACATTGTTGGGAAAGTGGTTGAG 59.616 43.478 0.00 0.00 0.00 3.02
5820 7432 3.374042 TTGTTGGGAAAGTGGTTGAGA 57.626 42.857 0.00 0.00 0.00 3.27
5821 7433 2.930950 TGTTGGGAAAGTGGTTGAGAG 58.069 47.619 0.00 0.00 0.00 3.20
5822 7434 1.609072 GTTGGGAAAGTGGTTGAGAGC 59.391 52.381 0.00 0.00 0.00 4.09
5823 7435 0.110486 TGGGAAAGTGGTTGAGAGCC 59.890 55.000 0.00 0.00 0.00 4.70
5824 7436 0.402121 GGGAAAGTGGTTGAGAGCCT 59.598 55.000 0.00 0.00 0.00 4.58
5825 7437 1.528129 GGAAAGTGGTTGAGAGCCTG 58.472 55.000 0.00 0.00 0.00 4.85
5826 7438 0.877743 GAAAGTGGTTGAGAGCCTGC 59.122 55.000 0.00 0.00 0.00 4.85
5827 7439 0.475906 AAAGTGGTTGAGAGCCTGCT 59.524 50.000 0.00 0.00 0.00 4.24
5828 7440 0.250640 AAGTGGTTGAGAGCCTGCTG 60.251 55.000 0.00 0.00 0.00 4.41
5829 7441 1.673665 GTGGTTGAGAGCCTGCTGG 60.674 63.158 5.03 5.03 0.00 4.85
5830 7442 2.149383 TGGTTGAGAGCCTGCTGGT 61.149 57.895 11.69 0.00 35.27 4.00
5831 7443 1.376553 GGTTGAGAGCCTGCTGGTC 60.377 63.158 11.69 7.66 41.93 4.02
5832 7444 1.739562 GTTGAGAGCCTGCTGGTCG 60.740 63.158 11.69 0.00 46.24 4.79
5833 7445 2.210013 TTGAGAGCCTGCTGGTCGT 61.210 57.895 11.69 0.00 46.24 4.34
5834 7446 1.758440 TTGAGAGCCTGCTGGTCGTT 61.758 55.000 11.69 0.00 46.24 3.85
5835 7447 1.446966 GAGAGCCTGCTGGTCGTTC 60.447 63.158 11.69 4.78 46.24 3.95
5836 7448 2.435059 GAGCCTGCTGGTCGTTCC 60.435 66.667 11.69 0.00 35.27 3.62
5837 7449 3.959991 GAGCCTGCTGGTCGTTCCC 62.960 68.421 11.69 0.00 35.27 3.97
5839 7451 3.322466 CCTGCTGGTCGTTCCCCT 61.322 66.667 0.51 0.00 34.77 4.79
5840 7452 2.266055 CTGCTGGTCGTTCCCCTC 59.734 66.667 0.00 0.00 34.77 4.30
5841 7453 3.316573 CTGCTGGTCGTTCCCCTCC 62.317 68.421 0.00 0.00 34.77 4.30
5842 7454 4.097361 GCTGGTCGTTCCCCTCCC 62.097 72.222 0.00 0.00 34.77 4.30
5843 7455 3.400054 CTGGTCGTTCCCCTCCCC 61.400 72.222 0.00 0.00 34.77 4.81
5845 7457 4.735599 GGTCGTTCCCCTCCCCCT 62.736 72.222 0.00 0.00 0.00 4.79
5846 7458 3.082055 GTCGTTCCCCTCCCCCTC 61.082 72.222 0.00 0.00 0.00 4.30
5847 7459 4.772231 TCGTTCCCCTCCCCCTCG 62.772 72.222 0.00 0.00 0.00 4.63
5848 7460 4.772231 CGTTCCCCTCCCCCTCGA 62.772 72.222 0.00 0.00 0.00 4.04
5849 7461 2.764547 GTTCCCCTCCCCCTCGAG 60.765 72.222 5.13 5.13 0.00 4.04
5850 7462 4.798682 TTCCCCTCCCCCTCGAGC 62.799 72.222 6.99 0.00 0.00 5.03
5864 7476 4.851214 GAGCCCGCCTCCTCTCCT 62.851 72.222 0.00 0.00 34.35 3.69
5865 7477 4.851214 AGCCCGCCTCCTCTCCTC 62.851 72.222 0.00 0.00 0.00 3.71
5876 7488 4.761058 TCTCCTCCCCGCGCTCTT 62.761 66.667 5.56 0.00 0.00 2.85
5877 7489 4.214327 CTCCTCCCCGCGCTCTTC 62.214 72.222 5.56 0.00 0.00 2.87
5884 7496 3.775654 CCGCGCTCTTCCCCTCTT 61.776 66.667 5.56 0.00 0.00 2.85
5885 7497 2.202810 CGCGCTCTTCCCCTCTTC 60.203 66.667 5.56 0.00 0.00 2.87
5886 7498 2.716017 CGCGCTCTTCCCCTCTTCT 61.716 63.158 5.56 0.00 0.00 2.85
5887 7499 1.142965 GCGCTCTTCCCCTCTTCTC 59.857 63.158 0.00 0.00 0.00 2.87
5888 7500 1.819905 CGCTCTTCCCCTCTTCTCC 59.180 63.158 0.00 0.00 0.00 3.71
5889 7501 0.686112 CGCTCTTCCCCTCTTCTCCT 60.686 60.000 0.00 0.00 0.00 3.69
5890 7502 1.119684 GCTCTTCCCCTCTTCTCCTC 58.880 60.000 0.00 0.00 0.00 3.71
5891 7503 1.342975 GCTCTTCCCCTCTTCTCCTCT 60.343 57.143 0.00 0.00 0.00 3.69
5892 7504 2.666317 CTCTTCCCCTCTTCTCCTCTC 58.334 57.143 0.00 0.00 0.00 3.20
5893 7505 1.289530 TCTTCCCCTCTTCTCCTCTCC 59.710 57.143 0.00 0.00 0.00 3.71
5894 7506 1.290732 CTTCCCCTCTTCTCCTCTCCT 59.709 57.143 0.00 0.00 0.00 3.69
5895 7507 0.930726 TCCCCTCTTCTCCTCTCCTC 59.069 60.000 0.00 0.00 0.00 3.71
5896 7508 0.105709 CCCCTCTTCTCCTCTCCTCC 60.106 65.000 0.00 0.00 0.00 4.30
5897 7509 0.105709 CCCTCTTCTCCTCTCCTCCC 60.106 65.000 0.00 0.00 0.00 4.30
5898 7510 0.105709 CCTCTTCTCCTCTCCTCCCC 60.106 65.000 0.00 0.00 0.00 4.81
5899 7511 0.633921 CTCTTCTCCTCTCCTCCCCA 59.366 60.000 0.00 0.00 0.00 4.96
5900 7512 0.336737 TCTTCTCCTCTCCTCCCCAC 59.663 60.000 0.00 0.00 0.00 4.61
5901 7513 0.689412 CTTCTCCTCTCCTCCCCACC 60.689 65.000 0.00 0.00 0.00 4.61
5902 7514 2.443016 CTCCTCTCCTCCCCACCG 60.443 72.222 0.00 0.00 0.00 4.94
5903 7515 4.779733 TCCTCTCCTCCCCACCGC 62.780 72.222 0.00 0.00 0.00 5.68
5905 7517 4.787280 CTCTCCTCCCCACCGCCT 62.787 72.222 0.00 0.00 0.00 5.52
5906 7518 4.779733 TCTCCTCCCCACCGCCTC 62.780 72.222 0.00 0.00 0.00 4.70
5920 7532 4.150454 CCTCCCGCCTCCTCTCCT 62.150 72.222 0.00 0.00 0.00 3.69
5921 7533 2.520741 CTCCCGCCTCCTCTCCTC 60.521 72.222 0.00 0.00 0.00 3.71
5922 7534 4.144727 TCCCGCCTCCTCTCCTCC 62.145 72.222 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 6.347160 GCTTTTTGGCTAGCTGATTTTCTTTG 60.347 38.462 15.72 0.00 34.57 2.77
36 37 0.161446 CGCAATTGTCGCTTTTTGGC 59.839 50.000 7.40 0.00 0.00 4.52
45 46 1.133253 CACCAGAGCGCAATTGTCG 59.867 57.895 11.47 15.07 0.00 4.35
46 47 0.110056 CACACCAGAGCGCAATTGTC 60.110 55.000 11.47 0.00 0.00 3.18
47 48 0.534877 TCACACCAGAGCGCAATTGT 60.535 50.000 11.47 1.85 0.00 2.71
75 90 2.099446 CGGGTATTGGCGTTTGCG 59.901 61.111 0.00 0.00 44.10 4.85
76 91 2.202557 GCGGGTATTGGCGTTTGC 60.203 61.111 0.00 0.00 41.71 3.68
101 117 2.484264 AGTTAGGCGTGTGCTTGATTTC 59.516 45.455 0.00 0.00 42.25 2.17
153 169 5.514169 TGGTATTGGTTTCCATGATAAGCA 58.486 37.500 0.00 0.68 31.53 3.91
161 177 5.937975 CCAAAGATGGTATTGGTTTCCAT 57.062 39.130 0.00 0.00 43.54 3.41
163 179 9.404456 CCAAGTCCAAAGATGGTATTGGTTTCC 62.404 44.444 17.86 0.00 46.70 3.13
165 181 5.245977 CCAAGTCCAAAGATGGTATTGGTTT 59.754 40.000 17.86 0.00 46.70 3.27
168 184 4.989279 CCAAGTCCAAAGATGGTATTGG 57.011 45.455 14.72 14.72 46.72 3.16
191 209 7.333174 GCATTAAGCTGGGATAAGATTAGACTC 59.667 40.741 0.00 0.00 41.15 3.36
198 216 4.040952 ACTCGCATTAAGCTGGGATAAGAT 59.959 41.667 0.00 0.00 42.61 2.40
214 232 4.046938 AGTATCAAATCGACACTCGCAT 57.953 40.909 0.00 0.00 40.21 4.73
215 233 3.503827 AGTATCAAATCGACACTCGCA 57.496 42.857 0.00 0.00 40.21 5.10
216 234 5.164273 CGATAAGTATCAAATCGACACTCGC 60.164 44.000 0.00 0.00 43.96 5.03
217 235 6.134061 TCGATAAGTATCAAATCGACACTCG 58.866 40.000 2.76 0.00 44.64 4.18
219 237 7.028926 ACTCGATAAGTATCAAATCGACACT 57.971 36.000 2.76 0.00 44.64 3.55
224 242 9.845305 GGTAAAAACTCGATAAGTATCAAATCG 57.155 33.333 0.00 0.00 42.90 3.34
238 256 4.220382 TCTTACATCCCGGTAAAAACTCGA 59.780 41.667 0.00 0.00 33.18 4.04
245 263 5.766174 GCCATAAATCTTACATCCCGGTAAA 59.234 40.000 0.00 0.00 33.18 2.01
246 264 5.072600 AGCCATAAATCTTACATCCCGGTAA 59.927 40.000 0.00 0.00 0.00 2.85
247 265 4.595781 AGCCATAAATCTTACATCCCGGTA 59.404 41.667 0.00 0.00 0.00 4.02
450 1989 0.940126 CTAGCTTTGCTATGCCGTGG 59.060 55.000 0.00 0.00 40.54 4.94
454 1993 0.815615 ACGGCTAGCTTTGCTATGCC 60.816 55.000 15.72 20.00 44.24 4.40
455 1994 1.017387 AACGGCTAGCTTTGCTATGC 58.983 50.000 15.72 6.21 40.54 3.14
457 1996 1.017387 GCAACGGCTAGCTTTGCTAT 58.983 50.000 30.98 7.36 40.54 2.97
648 2212 1.852157 ATGGAATGCCGGACTGGTGT 61.852 55.000 5.05 0.00 41.21 4.16
666 2230 0.557397 TTTGGGGATGGGGAGGGAAT 60.557 55.000 0.00 0.00 0.00 3.01
667 2231 0.557397 ATTTGGGGATGGGGAGGGAA 60.557 55.000 0.00 0.00 0.00 3.97
668 2232 0.557397 AATTTGGGGATGGGGAGGGA 60.557 55.000 0.00 0.00 0.00 4.20
669 2233 1.133167 GTAATTTGGGGATGGGGAGGG 60.133 57.143 0.00 0.00 0.00 4.30
670 2234 1.133167 GGTAATTTGGGGATGGGGAGG 60.133 57.143 0.00 0.00 0.00 4.30
754 2319 0.546122 TTTGGAGTGTGCTCACCTGT 59.454 50.000 14.99 0.00 44.83 4.00
766 2331 2.526046 CCTGGGGACGGTTTGGAGT 61.526 63.158 0.00 0.00 33.66 3.85
787 2352 3.524648 AAAACGAAGCGGCGGAGGA 62.525 57.895 9.78 0.00 35.12 3.71
830 2395 6.365518 GTGGCGAAAAATTAAAACCCGAATTA 59.634 34.615 0.00 0.00 0.00 1.40
831 2396 5.177881 GTGGCGAAAAATTAAAACCCGAATT 59.822 36.000 0.00 0.00 0.00 2.17
863 2428 3.211963 CGCCTGCAATACCCCAGC 61.212 66.667 0.00 0.00 0.00 4.85
913 2481 1.298859 GCGTGGAACATCACCTCACC 61.299 60.000 0.00 0.00 44.52 4.02
915 2483 1.003839 GGCGTGGAACATCACCTCA 60.004 57.895 0.00 0.00 44.52 3.86
916 2484 2.100631 CGGCGTGGAACATCACCTC 61.101 63.158 0.00 0.00 44.52 3.85
917 2485 2.047274 CGGCGTGGAACATCACCT 60.047 61.111 0.00 0.00 44.52 4.00
918 2486 3.799755 GCGGCGTGGAACATCACC 61.800 66.667 9.37 0.00 44.52 4.02
919 2487 4.147322 CGCGGCGTGGAACATCAC 62.147 66.667 15.36 0.00 44.52 3.06
1165 2757 2.279918 GCCGGATACCGCGACATT 60.280 61.111 8.23 0.00 46.86 2.71
1255 2847 3.277416 ACCCCTCTTCCTCTGTAGTTT 57.723 47.619 0.00 0.00 0.00 2.66
1513 3105 1.804372 GCCACTATCAGAAGCCGTCAG 60.804 57.143 0.00 0.00 0.00 3.51
1715 3307 2.110213 GAAGCACCACCACGTCCA 59.890 61.111 0.00 0.00 0.00 4.02
1771 3363 1.378250 CAGGAGGCAGGGCTTCAAG 60.378 63.158 3.79 0.00 36.34 3.02
1867 3459 3.929695 ATTGCATCCAAAGCATTCTTGCC 60.930 43.478 0.00 0.00 42.33 4.52
1870 3462 5.927281 ACTATTGCATCCAAAGCATTCTT 57.073 34.783 0.00 0.00 42.33 2.52
1929 3521 1.008327 TGGAGGACCTGATAAGGCTCA 59.992 52.381 0.00 0.00 37.04 4.26
1936 3528 3.775316 GGAAACTCTTGGAGGACCTGATA 59.225 47.826 0.00 0.00 37.04 2.15
1941 3533 1.700186 ACTGGAAACTCTTGGAGGACC 59.300 52.381 0.00 0.00 33.35 4.46
2013 3605 2.747989 CTGCAGCATGTTCACTGAGATT 59.252 45.455 0.00 0.00 39.31 2.40
2089 3681 0.169009 GGTGAACTGCCTTCGCATTC 59.831 55.000 7.00 0.00 46.11 2.67
2126 3718 1.973515 TCAGAGGAGCTTCAGCAGAAA 59.026 47.619 0.75 0.00 45.16 2.52
2138 3730 5.367937 TCCCCAAGATATTCTTTCAGAGGAG 59.632 44.000 0.00 0.00 33.78 3.69
2152 3744 4.523173 CGCTTCTGTAGTATCCCCAAGATA 59.477 45.833 0.00 0.00 36.33 1.98
2237 3829 0.103208 GACATGGTCAGGCTCCGTAG 59.897 60.000 0.00 0.00 32.09 3.51
2283 3875 4.635223 CTGTAAGCTCATGCAGGCTATTA 58.365 43.478 11.13 0.00 42.74 0.98
2353 3945 5.653769 TCTCATTAGAAAAATGCCTCAAGGG 59.346 40.000 0.00 0.00 35.18 3.95
2355 3947 8.048534 TCTTCTCATTAGAAAAATGCCTCAAG 57.951 34.615 0.00 0.00 41.19 3.02
2356 3948 8.585471 ATCTTCTCATTAGAAAAATGCCTCAA 57.415 30.769 0.00 0.00 41.19 3.02
2395 3987 1.463214 TCTCCCCCTTGTGCTCCAA 60.463 57.895 0.00 0.00 0.00 3.53
2461 4053 0.686789 GCCTTGGGTGAATTGCCTTT 59.313 50.000 0.00 0.00 0.00 3.11
2484 4076 5.043281 AGGATCTTCAGGAGGAGGTTTACTA 60.043 44.000 0.00 0.00 0.00 1.82
2485 4077 4.034410 GGATCTTCAGGAGGAGGTTTACT 58.966 47.826 0.00 0.00 0.00 2.24
2592 4184 0.660595 GTCTCATGATACCGTCGCCG 60.661 60.000 0.00 0.00 0.00 6.46
2711 4306 7.872993 CACTACTTTCAGACACTTTCTTATCCA 59.127 37.037 0.00 0.00 28.96 3.41
2734 4329 0.607489 GCCACATCAAGAGGTGCACT 60.607 55.000 17.98 2.27 41.31 4.40
2740 4347 2.110967 CCGCTGCCACATCAAGAGG 61.111 63.158 0.00 0.00 0.00 3.69
2757 4364 0.977108 TACCGTCACCATGTACCCCC 60.977 60.000 0.00 0.00 0.00 5.40
2769 4376 2.089201 ACACGTCTCATGATACCGTCA 58.911 47.619 10.40 0.00 42.06 4.35
2788 4395 6.985188 TTTTCTAGCTGTGAATGATACCAC 57.015 37.500 0.00 0.00 0.00 4.16
2816 4423 2.163818 TGCTTCAACAGGTAACCGAG 57.836 50.000 0.00 0.00 37.17 4.63
2847 4454 2.698274 TCTATCCAGATTAACCAGCGCA 59.302 45.455 11.47 0.00 0.00 6.09
2903 4510 2.289002 GCAAAGGATTCGCTCATAGTGG 59.711 50.000 0.00 0.00 0.00 4.00
2930 4537 8.319143 TGGACCTTTTATCTTTAACTTCTTCG 57.681 34.615 0.00 0.00 0.00 3.79
2974 4581 7.000472 ACAGATGTAGAAATGGTATTCATGGG 59.000 38.462 0.00 0.00 35.99 4.00
2978 4585 9.056005 GCAATACAGATGTAGAAATGGTATTCA 57.944 33.333 0.00 0.00 33.52 2.57
2979 4586 9.056005 TGCAATACAGATGTAGAAATGGTATTC 57.944 33.333 0.00 0.00 33.52 1.75
2980 4587 8.978874 TGCAATACAGATGTAGAAATGGTATT 57.021 30.769 0.00 0.00 33.52 1.89
2982 4589 9.710900 CTATGCAATACAGATGTAGAAATGGTA 57.289 33.333 0.00 0.00 33.52 3.25
2983 4590 7.173907 GCTATGCAATACAGATGTAGAAATGGT 59.826 37.037 0.00 0.00 33.52 3.55
2984 4591 7.173735 TGCTATGCAATACAGATGTAGAAATGG 59.826 37.037 0.00 0.00 34.76 3.16
2985 4592 8.091385 TGCTATGCAATACAGATGTAGAAATG 57.909 34.615 0.00 0.00 34.76 2.32
2986 4593 8.681486 TTGCTATGCAATACAGATGTAGAAAT 57.319 30.769 0.45 0.00 43.99 2.17
3001 4608 5.409214 GCTTCAATTTTTCCTTGCTATGCAA 59.591 36.000 4.87 4.87 46.80 4.08
3002 4609 4.931002 GCTTCAATTTTTCCTTGCTATGCA 59.069 37.500 0.00 0.00 36.47 3.96
3003 4610 4.931002 TGCTTCAATTTTTCCTTGCTATGC 59.069 37.500 0.00 0.00 0.00 3.14
3004 4611 6.814644 TCATGCTTCAATTTTTCCTTGCTATG 59.185 34.615 0.00 0.00 0.00 2.23
3005 4612 6.938507 TCATGCTTCAATTTTTCCTTGCTAT 58.061 32.000 0.00 0.00 0.00 2.97
3006 4613 6.343716 TCATGCTTCAATTTTTCCTTGCTA 57.656 33.333 0.00 0.00 0.00 3.49
3007 4614 5.217978 TCATGCTTCAATTTTTCCTTGCT 57.782 34.783 0.00 0.00 0.00 3.91
3008 4615 5.697633 TCTTCATGCTTCAATTTTTCCTTGC 59.302 36.000 0.00 0.00 0.00 4.01
3097 4704 3.566523 GTCTATCGAGATTAACCAGCGG 58.433 50.000 0.00 0.00 33.14 5.52
3111 4718 3.006859 TGCCCATAGAACATGGTCTATCG 59.993 47.826 27.09 21.42 38.52 2.92
3135 4742 2.766263 AGTGACAACAGACTCCTTCACA 59.234 45.455 0.00 0.00 36.61 3.58
3137 4744 4.832823 TCATAGTGACAACAGACTCCTTCA 59.167 41.667 0.00 0.00 0.00 3.02
3202 4809 6.122277 TGGGAAGATATTTACTTTGAGCTGG 58.878 40.000 0.00 0.00 0.00 4.85
3442 5049 2.254546 TGTTCCACAGCTTGAACGAT 57.745 45.000 13.10 0.00 42.93 3.73
3468 5075 4.404073 AGATCAATTCTACGGCTCTTCAGT 59.596 41.667 0.00 0.00 30.96 3.41
3835 5442 0.739561 ATTACTCGGACAGGCGTCTC 59.260 55.000 0.00 0.00 42.21 3.36
4453 6060 1.210478 GCCAGCAGAGATGGACCTTAA 59.790 52.381 5.34 0.00 42.34 1.85
4497 6104 1.078201 CGTCGCTATGCAACAGCTCA 61.078 55.000 18.32 5.43 36.86 4.26
4944 6551 4.963276 TCCATGCCGATGTAAAAAGAAG 57.037 40.909 0.00 0.00 0.00 2.85
5047 6655 1.774254 TGGCAAGGTTGAAAGAGGAGA 59.226 47.619 0.00 0.00 0.00 3.71
5155 6763 3.577415 GGTTCTGTAGTAGGTGGACAACT 59.423 47.826 0.00 0.00 0.00 3.16
5221 6829 5.246656 TCTCCAGGCAATTCACAATGAAATT 59.753 36.000 0.00 0.00 40.12 1.82
5222 6830 4.773674 TCTCCAGGCAATTCACAATGAAAT 59.226 37.500 0.00 0.00 40.12 2.17
5223 6831 4.151121 TCTCCAGGCAATTCACAATGAAA 58.849 39.130 0.00 0.00 40.12 2.69
5224 6832 3.760151 CTCTCCAGGCAATTCACAATGAA 59.240 43.478 0.00 0.00 41.09 2.57
5225 6833 3.349927 CTCTCCAGGCAATTCACAATGA 58.650 45.455 0.00 0.00 0.00 2.57
5226 6834 2.426024 CCTCTCCAGGCAATTCACAATG 59.574 50.000 0.00 0.00 30.98 2.82
5227 6835 2.042162 ACCTCTCCAGGCAATTCACAAT 59.958 45.455 0.00 0.00 45.05 2.71
5228 6836 1.425066 ACCTCTCCAGGCAATTCACAA 59.575 47.619 0.00 0.00 45.05 3.33
5229 6837 1.067295 ACCTCTCCAGGCAATTCACA 58.933 50.000 0.00 0.00 45.05 3.58
5230 6838 2.206576 AACCTCTCCAGGCAATTCAC 57.793 50.000 0.00 0.00 45.05 3.18
5231 6839 2.555227 GGAAACCTCTCCAGGCAATTCA 60.555 50.000 0.00 0.00 45.05 2.57
5232 6840 2.095461 GGAAACCTCTCCAGGCAATTC 58.905 52.381 0.00 0.00 45.05 2.17
5233 6841 1.614317 CGGAAACCTCTCCAGGCAATT 60.614 52.381 0.00 0.00 45.05 2.32
5234 6842 0.035056 CGGAAACCTCTCCAGGCAAT 60.035 55.000 0.00 0.00 45.05 3.56
5235 6843 1.374947 CGGAAACCTCTCCAGGCAA 59.625 57.895 0.00 0.00 45.05 4.52
5464 7076 7.186972 ACATATACTCCCTCCGTTCCATAATA 58.813 38.462 0.00 0.00 0.00 0.98
5562 7174 8.138928 TCCCAACTAACATATATCTGGATCTG 57.861 38.462 0.00 0.00 0.00 2.90
5563 7175 8.180165 TCTCCCAACTAACATATATCTGGATCT 58.820 37.037 0.00 0.00 0.00 2.75
5564 7176 8.367660 TCTCCCAACTAACATATATCTGGATC 57.632 38.462 0.00 0.00 0.00 3.36
5565 7177 8.598041 GTTCTCCCAACTAACATATATCTGGAT 58.402 37.037 0.00 0.00 0.00 3.41
5566 7178 7.567250 TGTTCTCCCAACTAACATATATCTGGA 59.433 37.037 0.00 0.00 0.00 3.86
5567 7179 7.735917 TGTTCTCCCAACTAACATATATCTGG 58.264 38.462 0.00 0.00 0.00 3.86
5568 7180 9.212641 CATGTTCTCCCAACTAACATATATCTG 57.787 37.037 0.00 0.00 40.83 2.90
5569 7181 9.159254 TCATGTTCTCCCAACTAACATATATCT 57.841 33.333 0.00 0.00 40.83 1.98
5570 7182 9.778741 TTCATGTTCTCCCAACTAACATATATC 57.221 33.333 0.00 0.00 40.83 1.63
5571 7183 9.561069 GTTCATGTTCTCCCAACTAACATATAT 57.439 33.333 0.00 0.00 40.83 0.86
5572 7184 7.709182 CGTTCATGTTCTCCCAACTAACATATA 59.291 37.037 0.00 0.00 40.83 0.86
5573 7185 6.538742 CGTTCATGTTCTCCCAACTAACATAT 59.461 38.462 0.00 0.00 40.83 1.78
5574 7186 5.872617 CGTTCATGTTCTCCCAACTAACATA 59.127 40.000 0.00 0.00 40.83 2.29
5575 7187 4.695455 CGTTCATGTTCTCCCAACTAACAT 59.305 41.667 0.00 0.00 42.91 2.71
5576 7188 4.062293 CGTTCATGTTCTCCCAACTAACA 58.938 43.478 0.00 0.00 37.51 2.41
5577 7189 4.062991 ACGTTCATGTTCTCCCAACTAAC 58.937 43.478 0.00 0.00 0.00 2.34
5578 7190 4.345859 ACGTTCATGTTCTCCCAACTAA 57.654 40.909 0.00 0.00 0.00 2.24
5579 7191 4.312443 GAACGTTCATGTTCTCCCAACTA 58.688 43.478 23.12 0.00 43.82 2.24
5580 7192 2.930826 ACGTTCATGTTCTCCCAACT 57.069 45.000 0.00 0.00 0.00 3.16
5581 7193 3.537793 GAACGTTCATGTTCTCCCAAC 57.462 47.619 23.12 0.00 43.82 3.77
5588 7200 5.659048 AAACTCTGAGAACGTTCATGTTC 57.341 39.130 28.78 17.86 46.78 3.18
5589 7201 5.177696 GCTAAACTCTGAGAACGTTCATGTT 59.822 40.000 28.78 20.09 34.02 2.71
5590 7202 4.686554 GCTAAACTCTGAGAACGTTCATGT 59.313 41.667 28.78 16.05 0.00 3.21
5591 7203 4.201532 CGCTAAACTCTGAGAACGTTCATG 60.202 45.833 28.78 17.60 0.00 3.07
5592 7204 3.921021 CGCTAAACTCTGAGAACGTTCAT 59.079 43.478 28.78 14.60 0.00 2.57
5593 7205 3.004002 TCGCTAAACTCTGAGAACGTTCA 59.996 43.478 28.78 10.41 0.00 3.18
5594 7206 3.562505 TCGCTAAACTCTGAGAACGTTC 58.437 45.455 20.71 20.71 0.00 3.95
5595 7207 3.637998 TCGCTAAACTCTGAGAACGTT 57.362 42.857 12.44 0.00 0.00 3.99
5596 7208 3.637998 TTCGCTAAACTCTGAGAACGT 57.362 42.857 12.44 0.00 0.00 3.99
5597 7209 6.291849 CCAATATTCGCTAAACTCTGAGAACG 60.292 42.308 12.44 7.34 0.00 3.95
5598 7210 6.510317 GCCAATATTCGCTAAACTCTGAGAAC 60.510 42.308 12.44 0.00 0.00 3.01
5599 7211 5.523916 GCCAATATTCGCTAAACTCTGAGAA 59.476 40.000 12.44 0.00 0.00 2.87
5600 7212 5.050490 GCCAATATTCGCTAAACTCTGAGA 58.950 41.667 12.44 0.00 0.00 3.27
5601 7213 4.212214 GGCCAATATTCGCTAAACTCTGAG 59.788 45.833 5.01 2.45 0.00 3.35
5602 7214 4.127171 GGCCAATATTCGCTAAACTCTGA 58.873 43.478 5.01 0.00 0.00 3.27
5603 7215 3.059597 CGGCCAATATTCGCTAAACTCTG 60.060 47.826 2.24 0.00 0.00 3.35
5604 7216 3.131396 CGGCCAATATTCGCTAAACTCT 58.869 45.455 2.24 0.00 0.00 3.24
5605 7217 2.870411 ACGGCCAATATTCGCTAAACTC 59.130 45.455 2.24 0.00 0.00 3.01
5606 7218 2.870411 GACGGCCAATATTCGCTAAACT 59.130 45.455 2.24 0.00 0.00 2.66
5607 7219 2.348218 CGACGGCCAATATTCGCTAAAC 60.348 50.000 2.24 0.00 0.00 2.01
5608 7220 1.862201 CGACGGCCAATATTCGCTAAA 59.138 47.619 2.24 0.00 0.00 1.85
5609 7221 1.493772 CGACGGCCAATATTCGCTAA 58.506 50.000 2.24 0.00 0.00 3.09
5610 7222 0.319211 CCGACGGCCAATATTCGCTA 60.319 55.000 2.24 0.00 0.00 4.26
5611 7223 1.594293 CCGACGGCCAATATTCGCT 60.594 57.895 2.24 0.00 0.00 4.93
5612 7224 0.949105 ATCCGACGGCCAATATTCGC 60.949 55.000 9.66 0.00 0.00 4.70
5613 7225 1.068474 GATCCGACGGCCAATATTCG 58.932 55.000 9.66 1.94 0.00 3.34
5614 7226 2.069273 CAGATCCGACGGCCAATATTC 58.931 52.381 9.66 0.00 0.00 1.75
5615 7227 1.270839 CCAGATCCGACGGCCAATATT 60.271 52.381 9.66 0.00 0.00 1.28
5616 7228 0.321671 CCAGATCCGACGGCCAATAT 59.678 55.000 9.66 0.00 0.00 1.28
5617 7229 1.046472 ACCAGATCCGACGGCCAATA 61.046 55.000 9.66 0.00 0.00 1.90
5618 7230 1.910580 AACCAGATCCGACGGCCAAT 61.911 55.000 9.66 0.00 0.00 3.16
5619 7231 2.589157 AACCAGATCCGACGGCCAA 61.589 57.895 9.66 0.00 0.00 4.52
5620 7232 3.000819 AACCAGATCCGACGGCCA 61.001 61.111 9.66 0.00 0.00 5.36
5621 7233 2.511600 CAACCAGATCCGACGGCC 60.512 66.667 9.66 3.31 0.00 6.13
5622 7234 3.195698 GCAACCAGATCCGACGGC 61.196 66.667 9.66 0.00 0.00 5.68
5623 7235 1.079127 AAGCAACCAGATCCGACGG 60.079 57.895 7.84 7.84 0.00 4.79
5624 7236 0.389817 TCAAGCAACCAGATCCGACG 60.390 55.000 0.00 0.00 0.00 5.12
5625 7237 1.936547 GATCAAGCAACCAGATCCGAC 59.063 52.381 0.00 0.00 33.70 4.79
5626 7238 1.471501 CGATCAAGCAACCAGATCCGA 60.472 52.381 0.00 0.00 35.82 4.55
5627 7239 0.933097 CGATCAAGCAACCAGATCCG 59.067 55.000 0.00 0.00 35.82 4.18
5628 7240 1.134401 TCCGATCAAGCAACCAGATCC 60.134 52.381 0.00 0.00 35.82 3.36
5629 7241 2.315925 TCCGATCAAGCAACCAGATC 57.684 50.000 0.00 0.00 35.86 2.75
5630 7242 2.437281 AGATCCGATCAAGCAACCAGAT 59.563 45.455 11.01 0.00 0.00 2.90
5631 7243 1.833630 AGATCCGATCAAGCAACCAGA 59.166 47.619 11.01 0.00 0.00 3.86
5632 7244 2.208431 GAGATCCGATCAAGCAACCAG 58.792 52.381 11.01 0.00 0.00 4.00
5633 7245 1.471501 CGAGATCCGATCAAGCAACCA 60.472 52.381 11.01 0.00 41.76 3.67
5634 7246 1.212616 CGAGATCCGATCAAGCAACC 58.787 55.000 11.01 0.00 41.76 3.77
5635 7247 1.212616 CCGAGATCCGATCAAGCAAC 58.787 55.000 11.01 0.00 41.76 4.17
5636 7248 0.530650 GCCGAGATCCGATCAAGCAA 60.531 55.000 11.01 0.00 41.76 3.91
5637 7249 1.068083 GCCGAGATCCGATCAAGCA 59.932 57.895 11.01 0.00 41.76 3.91
5638 7250 1.666234 GGCCGAGATCCGATCAAGC 60.666 63.158 11.01 9.39 41.76 4.01
5639 7251 4.663444 GGCCGAGATCCGATCAAG 57.337 61.111 11.01 4.00 41.76 3.02
5646 7258 3.270335 GATCCGACGGCCGAGATCC 62.270 68.421 35.90 18.21 41.76 3.36
5647 7259 2.071844 TTGATCCGACGGCCGAGATC 62.072 60.000 35.90 33.26 41.29 2.75
5648 7260 2.076622 CTTGATCCGACGGCCGAGAT 62.077 60.000 35.90 28.22 41.76 2.75
5649 7261 2.752640 TTGATCCGACGGCCGAGA 60.753 61.111 35.90 24.79 41.76 4.04
5650 7262 2.278857 CTTGATCCGACGGCCGAG 60.279 66.667 35.90 24.42 41.76 4.63
5651 7263 3.060020 GACTTGATCCGACGGCCGA 62.060 63.158 35.90 10.13 41.76 5.54
5652 7264 2.582498 GACTTGATCCGACGGCCG 60.582 66.667 26.86 26.86 38.18 6.13
5653 7265 2.202892 GGACTTGATCCGACGGCC 60.203 66.667 9.66 3.97 37.88 6.13
5659 7271 4.947449 AGGTCTTCCAAGGACTTGATCCG 61.947 52.174 13.35 0.00 44.02 4.18
5660 7272 2.573915 AGGTCTTCCAAGGACTTGATCC 59.426 50.000 13.35 7.83 42.93 3.36
5661 7273 3.677424 CGAGGTCTTCCAAGGACTTGATC 60.677 52.174 13.35 0.00 42.93 2.92
5662 7274 2.234908 CGAGGTCTTCCAAGGACTTGAT 59.765 50.000 13.35 0.00 42.93 2.57
5663 7275 1.618837 CGAGGTCTTCCAAGGACTTGA 59.381 52.381 13.35 0.00 42.93 3.02
5664 7276 1.338200 CCGAGGTCTTCCAAGGACTTG 60.338 57.143 5.09 5.09 40.13 3.16
5665 7277 0.977395 CCGAGGTCTTCCAAGGACTT 59.023 55.000 0.00 0.00 35.53 3.01
5666 7278 1.545706 GCCGAGGTCTTCCAAGGACT 61.546 60.000 0.00 0.00 35.53 3.85
5667 7279 1.079057 GCCGAGGTCTTCCAAGGAC 60.079 63.158 0.00 0.00 35.53 3.85
5668 7280 2.291043 GGCCGAGGTCTTCCAAGGA 61.291 63.158 0.00 0.00 35.53 3.36
5669 7281 2.269241 GGCCGAGGTCTTCCAAGG 59.731 66.667 0.00 0.00 36.23 3.61
5670 7282 2.125512 CGGCCGAGGTCTTCCAAG 60.126 66.667 24.07 0.00 35.89 3.61
5671 7283 2.920912 ACGGCCGAGGTCTTCCAA 60.921 61.111 35.90 0.00 35.89 3.53
5672 7284 3.379445 GACGGCCGAGGTCTTCCA 61.379 66.667 35.90 0.00 35.89 3.53
5673 7285 4.493747 CGACGGCCGAGGTCTTCC 62.494 72.222 35.90 8.64 41.76 3.46
5674 7286 4.493747 CCGACGGCCGAGGTCTTC 62.494 72.222 35.90 17.14 41.76 2.87
5676 7288 4.816984 ATCCGACGGCCGAGGTCT 62.817 66.667 35.90 21.11 41.76 3.85
5677 7289 4.267503 GATCCGACGGCCGAGGTC 62.268 72.222 35.90 25.46 41.76 3.85
5680 7292 3.808771 CTTCGATCCGACGGCCGAG 62.809 68.421 35.90 24.42 41.76 4.63
5681 7293 3.884350 CTTCGATCCGACGGCCGA 61.884 66.667 35.90 21.49 41.76 5.54
5682 7294 3.808771 CTCTTCGATCCGACGGCCG 62.809 68.421 26.86 26.86 34.89 6.13
5683 7295 2.026301 CTCTTCGATCCGACGGCC 59.974 66.667 9.66 2.30 34.89 6.13
5684 7296 2.026301 CCTCTTCGATCCGACGGC 59.974 66.667 9.66 0.00 34.89 5.68
5685 7297 1.064296 CACCTCTTCGATCCGACGG 59.936 63.158 7.84 7.84 34.89 4.79
5686 7298 0.248134 GACACCTCTTCGATCCGACG 60.248 60.000 0.00 0.00 34.89 5.12
5687 7299 0.809385 TGACACCTCTTCGATCCGAC 59.191 55.000 0.00 0.00 34.89 4.79
5688 7300 0.809385 GTGACACCTCTTCGATCCGA 59.191 55.000 0.00 0.00 0.00 4.55
5689 7301 0.811915 AGTGACACCTCTTCGATCCG 59.188 55.000 0.84 0.00 0.00 4.18
5690 7302 1.546476 ACAGTGACACCTCTTCGATCC 59.454 52.381 0.84 0.00 0.00 3.36
5691 7303 2.989840 CAACAGTGACACCTCTTCGATC 59.010 50.000 0.84 0.00 0.00 3.69
5692 7304 2.868044 GCAACAGTGACACCTCTTCGAT 60.868 50.000 0.84 0.00 0.00 3.59
5693 7305 1.538204 GCAACAGTGACACCTCTTCGA 60.538 52.381 0.84 0.00 0.00 3.71
5694 7306 0.861837 GCAACAGTGACACCTCTTCG 59.138 55.000 0.84 0.00 0.00 3.79
5695 7307 1.953559 TGCAACAGTGACACCTCTTC 58.046 50.000 0.84 0.00 0.00 2.87
5696 7308 2.418368 TTGCAACAGTGACACCTCTT 57.582 45.000 0.84 0.00 0.00 2.85
5697 7309 2.158769 TCATTGCAACAGTGACACCTCT 60.159 45.455 0.00 0.00 0.00 3.69
5698 7310 2.221169 TCATTGCAACAGTGACACCTC 58.779 47.619 0.00 0.00 0.00 3.85
5699 7311 2.346766 TCATTGCAACAGTGACACCT 57.653 45.000 0.00 0.00 0.00 4.00
5700 7312 3.648339 ATTCATTGCAACAGTGACACC 57.352 42.857 0.00 0.00 30.16 4.16
5701 7313 5.362556 ACTATTCATTGCAACAGTGACAC 57.637 39.130 0.00 0.00 30.16 3.67
5702 7314 6.072728 GGTAACTATTCATTGCAACAGTGACA 60.073 38.462 0.00 0.00 30.16 3.58
5703 7315 6.314784 GGTAACTATTCATTGCAACAGTGAC 58.685 40.000 0.00 3.84 30.16 3.67
5704 7316 6.494893 GGTAACTATTCATTGCAACAGTGA 57.505 37.500 0.00 0.00 0.00 3.41
5722 7334 5.867716 TGAGATTTTTACAGCGAGAGGTAAC 59.132 40.000 0.00 0.00 41.81 2.50
5723 7335 6.032956 TGAGATTTTTACAGCGAGAGGTAA 57.967 37.500 0.00 0.00 41.81 2.85
5724 7336 5.654603 TGAGATTTTTACAGCGAGAGGTA 57.345 39.130 0.00 0.00 41.81 3.08
5725 7337 4.537135 TGAGATTTTTACAGCGAGAGGT 57.463 40.909 0.00 0.00 46.81 3.85
5726 7338 4.260538 GCATGAGATTTTTACAGCGAGAGG 60.261 45.833 0.00 0.00 0.00 3.69
5727 7339 4.260538 GGCATGAGATTTTTACAGCGAGAG 60.261 45.833 0.00 0.00 0.00 3.20
5728 7340 3.623060 GGCATGAGATTTTTACAGCGAGA 59.377 43.478 0.00 0.00 0.00 4.04
5729 7341 3.374988 TGGCATGAGATTTTTACAGCGAG 59.625 43.478 0.00 0.00 0.00 5.03
5730 7342 3.126858 GTGGCATGAGATTTTTACAGCGA 59.873 43.478 0.00 0.00 0.00 4.93
5731 7343 3.429085 GTGGCATGAGATTTTTACAGCG 58.571 45.455 0.00 0.00 0.00 5.18
5732 7344 3.731867 CGGTGGCATGAGATTTTTACAGC 60.732 47.826 0.00 0.00 0.00 4.40
5733 7345 3.731867 GCGGTGGCATGAGATTTTTACAG 60.732 47.826 0.00 0.00 39.62 2.74
5734 7346 2.163412 GCGGTGGCATGAGATTTTTACA 59.837 45.455 0.00 0.00 39.62 2.41
5735 7347 2.791158 CGCGGTGGCATGAGATTTTTAC 60.791 50.000 0.00 0.00 39.92 2.01
5736 7348 1.400142 CGCGGTGGCATGAGATTTTTA 59.600 47.619 0.00 0.00 39.92 1.52
5737 7349 0.171007 CGCGGTGGCATGAGATTTTT 59.829 50.000 0.00 0.00 39.92 1.94
5738 7350 0.960364 ACGCGGTGGCATGAGATTTT 60.960 50.000 12.47 0.00 39.92 1.82
5739 7351 1.377202 ACGCGGTGGCATGAGATTT 60.377 52.632 12.47 0.00 39.92 2.17
5740 7352 2.108514 CACGCGGTGGCATGAGATT 61.109 57.895 12.47 0.00 33.28 2.40
5741 7353 1.955495 TACACGCGGTGGCATGAGAT 61.955 55.000 12.47 0.00 35.54 2.75
5742 7354 2.161078 TTACACGCGGTGGCATGAGA 62.161 55.000 12.47 0.00 35.54 3.27
5743 7355 1.089481 ATTACACGCGGTGGCATGAG 61.089 55.000 12.47 0.00 35.54 2.90
5744 7356 0.675208 AATTACACGCGGTGGCATGA 60.675 50.000 12.47 0.00 35.54 3.07
5745 7357 0.248054 GAATTACACGCGGTGGCATG 60.248 55.000 12.47 0.00 38.56 4.06
5746 7358 0.392461 AGAATTACACGCGGTGGCAT 60.392 50.000 12.47 0.40 37.94 4.40
5747 7359 1.004320 AGAATTACACGCGGTGGCA 60.004 52.632 12.47 0.00 37.94 4.92
5748 7360 1.713830 GAGAATTACACGCGGTGGC 59.286 57.895 12.47 0.00 37.94 5.01
5749 7361 0.734942 ACGAGAATTACACGCGGTGG 60.735 55.000 12.47 1.38 37.94 4.61
5750 7362 0.365523 CACGAGAATTACACGCGGTG 59.634 55.000 12.47 9.20 39.75 4.94
5751 7363 1.349259 GCACGAGAATTACACGCGGT 61.349 55.000 12.47 8.38 36.14 5.68
5752 7364 1.343821 GCACGAGAATTACACGCGG 59.656 57.895 12.47 1.27 36.14 6.46
5753 7365 1.343821 GGCACGAGAATTACACGCG 59.656 57.895 3.53 3.53 36.14 6.01
5754 7366 1.702491 GGGGCACGAGAATTACACGC 61.702 60.000 0.00 0.00 36.14 5.34
5755 7367 2.380081 GGGGCACGAGAATTACACG 58.620 57.895 0.00 0.00 38.45 4.49
5775 7387 4.625311 GTGAAATTACGAAAATGCCCTTGG 59.375 41.667 0.00 0.00 0.00 3.61
5776 7388 5.226396 TGTGAAATTACGAAAATGCCCTTG 58.774 37.500 0.00 0.00 0.00 3.61
5777 7389 5.461032 TGTGAAATTACGAAAATGCCCTT 57.539 34.783 0.00 0.00 0.00 3.95
5778 7390 5.659440 ATGTGAAATTACGAAAATGCCCT 57.341 34.783 0.00 0.00 0.00 5.19
5779 7391 5.637387 ACAATGTGAAATTACGAAAATGCCC 59.363 36.000 0.00 0.00 0.00 5.36
5780 7392 6.704512 ACAATGTGAAATTACGAAAATGCC 57.295 33.333 0.00 0.00 0.00 4.40
5781 7393 7.008859 CCAACAATGTGAAATTACGAAAATGC 58.991 34.615 0.00 0.00 0.00 3.56
5782 7394 7.383572 TCCCAACAATGTGAAATTACGAAAATG 59.616 33.333 0.00 0.00 0.00 2.32
5783 7395 7.437748 TCCCAACAATGTGAAATTACGAAAAT 58.562 30.769 0.00 0.00 0.00 1.82
5784 7396 6.806751 TCCCAACAATGTGAAATTACGAAAA 58.193 32.000 0.00 0.00 0.00 2.29
5785 7397 6.392625 TCCCAACAATGTGAAATTACGAAA 57.607 33.333 0.00 0.00 0.00 3.46
5786 7398 6.392625 TTCCCAACAATGTGAAATTACGAA 57.607 33.333 0.00 0.00 0.00 3.85
5787 7399 6.039941 ACTTTCCCAACAATGTGAAATTACGA 59.960 34.615 0.00 0.00 33.39 3.43
5788 7400 6.143758 CACTTTCCCAACAATGTGAAATTACG 59.856 38.462 0.00 0.00 33.39 3.18
5789 7401 6.423604 CCACTTTCCCAACAATGTGAAATTAC 59.576 38.462 0.00 0.00 33.39 1.89
5790 7402 6.098982 ACCACTTTCCCAACAATGTGAAATTA 59.901 34.615 0.00 0.00 33.39 1.40
5791 7403 5.104569 ACCACTTTCCCAACAATGTGAAATT 60.105 36.000 0.00 0.00 33.39 1.82
5792 7404 4.408596 ACCACTTTCCCAACAATGTGAAAT 59.591 37.500 0.00 0.00 33.39 2.17
5793 7405 3.772025 ACCACTTTCCCAACAATGTGAAA 59.228 39.130 0.00 0.00 34.74 2.69
5794 7406 3.370104 ACCACTTTCCCAACAATGTGAA 58.630 40.909 0.00 0.00 34.74 3.18
5795 7407 3.025322 ACCACTTTCCCAACAATGTGA 57.975 42.857 0.00 0.00 34.74 3.58
5796 7408 3.131933 TCAACCACTTTCCCAACAATGTG 59.868 43.478 0.00 0.00 33.32 3.21
5797 7409 3.370104 TCAACCACTTTCCCAACAATGT 58.630 40.909 0.00 0.00 0.00 2.71
5798 7410 3.636300 TCTCAACCACTTTCCCAACAATG 59.364 43.478 0.00 0.00 0.00 2.82
5799 7411 3.891366 CTCTCAACCACTTTCCCAACAAT 59.109 43.478 0.00 0.00 0.00 2.71
5800 7412 3.287222 CTCTCAACCACTTTCCCAACAA 58.713 45.455 0.00 0.00 0.00 2.83
5801 7413 2.930950 CTCTCAACCACTTTCCCAACA 58.069 47.619 0.00 0.00 0.00 3.33
5802 7414 1.609072 GCTCTCAACCACTTTCCCAAC 59.391 52.381 0.00 0.00 0.00 3.77
5803 7415 1.478654 GGCTCTCAACCACTTTCCCAA 60.479 52.381 0.00 0.00 0.00 4.12
5804 7416 0.110486 GGCTCTCAACCACTTTCCCA 59.890 55.000 0.00 0.00 0.00 4.37
5805 7417 0.402121 AGGCTCTCAACCACTTTCCC 59.598 55.000 0.00 0.00 0.00 3.97
5806 7418 1.528129 CAGGCTCTCAACCACTTTCC 58.472 55.000 0.00 0.00 0.00 3.13
5807 7419 0.877743 GCAGGCTCTCAACCACTTTC 59.122 55.000 0.00 0.00 0.00 2.62
5808 7420 0.475906 AGCAGGCTCTCAACCACTTT 59.524 50.000 0.00 0.00 0.00 2.66
5809 7421 0.250640 CAGCAGGCTCTCAACCACTT 60.251 55.000 0.00 0.00 0.00 3.16
5810 7422 1.374190 CAGCAGGCTCTCAACCACT 59.626 57.895 0.00 0.00 0.00 4.00
5811 7423 1.673665 CCAGCAGGCTCTCAACCAC 60.674 63.158 0.00 0.00 0.00 4.16
5812 7424 2.116983 GACCAGCAGGCTCTCAACCA 62.117 60.000 0.00 0.00 39.06 3.67
5813 7425 1.376553 GACCAGCAGGCTCTCAACC 60.377 63.158 0.00 0.00 39.06 3.77
5814 7426 1.739562 CGACCAGCAGGCTCTCAAC 60.740 63.158 0.00 0.00 39.06 3.18
5815 7427 1.758440 AACGACCAGCAGGCTCTCAA 61.758 55.000 0.00 0.00 39.06 3.02
5816 7428 2.159819 GAACGACCAGCAGGCTCTCA 62.160 60.000 0.00 0.00 39.06 3.27
5817 7429 1.446966 GAACGACCAGCAGGCTCTC 60.447 63.158 0.00 0.00 39.06 3.20
5818 7430 2.659610 GAACGACCAGCAGGCTCT 59.340 61.111 0.00 0.00 39.06 4.09
5819 7431 2.435059 GGAACGACCAGCAGGCTC 60.435 66.667 0.00 0.00 39.06 4.70
5820 7432 4.021925 GGGAACGACCAGCAGGCT 62.022 66.667 0.00 0.00 41.20 4.58
5822 7434 3.316573 GAGGGGAACGACCAGCAGG 62.317 68.421 0.00 0.00 41.20 4.85
5823 7435 2.266055 GAGGGGAACGACCAGCAG 59.734 66.667 0.00 0.00 41.20 4.24
5824 7436 3.319198 GGAGGGGAACGACCAGCA 61.319 66.667 0.00 0.00 41.20 4.41
5825 7437 4.097361 GGGAGGGGAACGACCAGC 62.097 72.222 0.00 0.00 41.20 4.85
5826 7438 3.400054 GGGGAGGGGAACGACCAG 61.400 72.222 0.00 0.00 41.20 4.00
5828 7440 4.735599 AGGGGGAGGGGAACGACC 62.736 72.222 0.00 0.00 38.08 4.79
5829 7441 3.082055 GAGGGGGAGGGGAACGAC 61.082 72.222 0.00 0.00 0.00 4.34
5830 7442 4.772231 CGAGGGGGAGGGGAACGA 62.772 72.222 0.00 0.00 0.00 3.85
5831 7443 4.772231 TCGAGGGGGAGGGGAACG 62.772 72.222 0.00 0.00 0.00 3.95
5832 7444 2.764547 CTCGAGGGGGAGGGGAAC 60.765 72.222 3.91 0.00 0.00 3.62
5833 7445 4.798682 GCTCGAGGGGGAGGGGAA 62.799 72.222 15.58 0.00 34.56 3.97
5847 7459 4.851214 AGGAGAGGAGGCGGGCTC 62.851 72.222 22.20 22.20 0.00 4.70
5848 7460 4.851214 GAGGAGAGGAGGCGGGCT 62.851 72.222 2.69 2.69 0.00 5.19
5859 7471 4.761058 AAGAGCGCGGGGAGGAGA 62.761 66.667 8.83 0.00 0.00 3.71
5860 7472 4.214327 GAAGAGCGCGGGGAGGAG 62.214 72.222 8.83 0.00 0.00 3.69
5867 7479 3.724914 GAAGAGGGGAAGAGCGCGG 62.725 68.421 8.83 0.00 0.00 6.46
5868 7480 2.202810 GAAGAGGGGAAGAGCGCG 60.203 66.667 0.00 0.00 0.00 6.86
5869 7481 1.142965 GAGAAGAGGGGAAGAGCGC 59.857 63.158 0.00 0.00 0.00 5.92
5870 7482 0.686112 AGGAGAAGAGGGGAAGAGCG 60.686 60.000 0.00 0.00 0.00 5.03
5871 7483 1.119684 GAGGAGAAGAGGGGAAGAGC 58.880 60.000 0.00 0.00 0.00 4.09
5872 7484 2.666317 GAGAGGAGAAGAGGGGAAGAG 58.334 57.143 0.00 0.00 0.00 2.85
5873 7485 1.289530 GGAGAGGAGAAGAGGGGAAGA 59.710 57.143 0.00 0.00 0.00 2.87
5874 7486 1.290732 AGGAGAGGAGAAGAGGGGAAG 59.709 57.143 0.00 0.00 0.00 3.46
5875 7487 1.289530 GAGGAGAGGAGAAGAGGGGAA 59.710 57.143 0.00 0.00 0.00 3.97
5876 7488 0.930726 GAGGAGAGGAGAAGAGGGGA 59.069 60.000 0.00 0.00 0.00 4.81
5877 7489 0.105709 GGAGGAGAGGAGAAGAGGGG 60.106 65.000 0.00 0.00 0.00 4.79
5878 7490 0.105709 GGGAGGAGAGGAGAAGAGGG 60.106 65.000 0.00 0.00 0.00 4.30
5879 7491 0.105709 GGGGAGGAGAGGAGAAGAGG 60.106 65.000 0.00 0.00 0.00 3.69
5880 7492 0.633921 TGGGGAGGAGAGGAGAAGAG 59.366 60.000 0.00 0.00 0.00 2.85
5881 7493 0.336737 GTGGGGAGGAGAGGAGAAGA 59.663 60.000 0.00 0.00 0.00 2.87
5882 7494 0.689412 GGTGGGGAGGAGAGGAGAAG 60.689 65.000 0.00 0.00 0.00 2.85
5883 7495 1.392534 GGTGGGGAGGAGAGGAGAA 59.607 63.158 0.00 0.00 0.00 2.87
5884 7496 2.997584 CGGTGGGGAGGAGAGGAGA 61.998 68.421 0.00 0.00 0.00 3.71
5885 7497 2.443016 CGGTGGGGAGGAGAGGAG 60.443 72.222 0.00 0.00 0.00 3.69
5886 7498 4.779733 GCGGTGGGGAGGAGAGGA 62.780 72.222 0.00 0.00 0.00 3.71
5888 7500 4.787280 AGGCGGTGGGGAGGAGAG 62.787 72.222 0.00 0.00 0.00 3.20
5889 7501 4.779733 GAGGCGGTGGGGAGGAGA 62.780 72.222 0.00 0.00 0.00 3.71
5903 7515 4.150454 AGGAGAGGAGGCGGGAGG 62.150 72.222 0.00 0.00 0.00 4.30
5904 7516 2.520741 GAGGAGAGGAGGCGGGAG 60.521 72.222 0.00 0.00 0.00 4.30
5905 7517 4.144727 GGAGGAGAGGAGGCGGGA 62.145 72.222 0.00 0.00 0.00 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.