Multiple sequence alignment - TraesCS1D01G116100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G116100 chr1D 100.000 2512 0 0 1 2512 111953330 111950819 0.000000e+00 4639.0
1 TraesCS1D01G116100 chr1D 94.264 645 26 6 1 634 434607562 434608206 0.000000e+00 976.0
2 TraesCS1D01G116100 chr1A 86.727 1002 71 34 1056 2032 118877416 118876452 0.000000e+00 1057.0
3 TraesCS1D01G116100 chr1A 86.685 368 23 17 673 1036 118877739 118877394 3.920000e-103 385.0
4 TraesCS1D01G116100 chr4D 95.768 638 17 3 1 628 422199436 422200073 0.000000e+00 1020.0
5 TraesCS1D01G116100 chr4D 94.769 650 15 4 1 631 74410251 74409602 0.000000e+00 994.0
6 TraesCS1D01G116100 chr4B 94.976 637 27 2 1 632 615553284 615553920 0.000000e+00 994.0
7 TraesCS1D01G116100 chr2A 95.000 640 21 4 1 630 9996691 9996053 0.000000e+00 994.0
8 TraesCS1D01G116100 chr2A 94.548 642 24 6 1 631 566667561 566666920 0.000000e+00 981.0
9 TraesCS1D01G116100 chr7B 96.072 611 16 3 1 603 747453778 747454388 0.000000e+00 989.0
10 TraesCS1D01G116100 chr7B 83.951 81 8 5 2214 2292 657660065 657659988 3.470000e-09 73.1
11 TraesCS1D01G116100 chr5B 94.844 640 21 3 1 631 61584432 61583796 0.000000e+00 989.0
12 TraesCS1D01G116100 chr2D 94.704 642 22 4 1 630 630315507 630314866 0.000000e+00 987.0
13 TraesCS1D01G116100 chr1B 81.811 1281 95 49 661 1913 171201448 171200278 0.000000e+00 948.0
14 TraesCS1D01G116100 chr5D 94.340 53 3 0 2230 2282 420277176 420277228 5.760000e-12 82.4
15 TraesCS1D01G116100 chr5A 88.571 70 5 3 2214 2282 533944219 533944286 5.760000e-12 82.4
16 TraesCS1D01G116100 chr3D 96.000 50 2 0 2230 2279 36979711 36979760 5.760000e-12 82.4
17 TraesCS1D01G116100 chr3D 94.340 53 3 0 2230 2282 157099406 157099354 5.760000e-12 82.4
18 TraesCS1D01G116100 chr6A 88.406 69 3 4 2171 2238 25021871 25021807 7.450000e-11 78.7
19 TraesCS1D01G116100 chr6A 91.379 58 4 1 2230 2286 311856945 311857002 7.450000e-11 78.7
20 TraesCS1D01G116100 chr7A 91.228 57 4 1 2224 2279 623742160 623742104 2.680000e-10 76.8
21 TraesCS1D01G116100 chr7A 91.228 57 4 1 2224 2279 623776195 623776139 2.680000e-10 76.8
22 TraesCS1D01G116100 chr4A 93.878 49 3 0 584 632 651474191 651474143 9.640000e-10 75.0
23 TraesCS1D01G116100 chr3A 86.765 68 7 2 2212 2279 359357298 359357233 9.640000e-10 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G116100 chr1D 111950819 111953330 2511 True 4639 4639 100.000 1 2512 1 chr1D.!!$R1 2511
1 TraesCS1D01G116100 chr1D 434607562 434608206 644 False 976 976 94.264 1 634 1 chr1D.!!$F1 633
2 TraesCS1D01G116100 chr1A 118876452 118877739 1287 True 721 1057 86.706 673 2032 2 chr1A.!!$R1 1359
3 TraesCS1D01G116100 chr4D 422199436 422200073 637 False 1020 1020 95.768 1 628 1 chr4D.!!$F1 627
4 TraesCS1D01G116100 chr4D 74409602 74410251 649 True 994 994 94.769 1 631 1 chr4D.!!$R1 630
5 TraesCS1D01G116100 chr4B 615553284 615553920 636 False 994 994 94.976 1 632 1 chr4B.!!$F1 631
6 TraesCS1D01G116100 chr2A 9996053 9996691 638 True 994 994 95.000 1 630 1 chr2A.!!$R1 629
7 TraesCS1D01G116100 chr2A 566666920 566667561 641 True 981 981 94.548 1 631 1 chr2A.!!$R2 630
8 TraesCS1D01G116100 chr7B 747453778 747454388 610 False 989 989 96.072 1 603 1 chr7B.!!$F1 602
9 TraesCS1D01G116100 chr5B 61583796 61584432 636 True 989 989 94.844 1 631 1 chr5B.!!$R1 630
10 TraesCS1D01G116100 chr2D 630314866 630315507 641 True 987 987 94.704 1 630 1 chr2D.!!$R1 629
11 TraesCS1D01G116100 chr1B 171200278 171201448 1170 True 948 948 81.811 661 1913 1 chr1B.!!$R1 1252

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
671 696 0.109272 TAAACTGCGAGGCGAGAGTG 60.109 55.0 0.0 0.0 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2190 2261 0.108945 GTACTAAGTCGGCGGCACTT 60.109 55.0 16.23 22.91 37.8 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
135 136 7.051623 TGTAATTTGGCTCGTTCTATATGGTT 58.948 34.615 0.00 0.00 0.00 3.67
545 556 5.811399 TCTTTTATATTGGCTTGTCGTGG 57.189 39.130 0.00 0.00 0.00 4.94
591 607 1.602237 CAGAGGCCGGGTGTAATGT 59.398 57.895 2.18 0.00 0.00 2.71
624 649 7.876896 TTTAAGTAATAAAGCGCCCTTTTTG 57.123 32.000 2.29 0.00 41.37 2.44
649 674 4.415881 AAATCAAGTTGGTTTTGGTCCC 57.584 40.909 8.34 0.00 22.78 4.46
650 675 2.534042 TCAAGTTGGTTTTGGTCCCA 57.466 45.000 2.34 0.00 0.00 4.37
651 676 2.383855 TCAAGTTGGTTTTGGTCCCAG 58.616 47.619 2.34 0.00 31.04 4.45
652 677 2.107366 CAAGTTGGTTTTGGTCCCAGT 58.893 47.619 0.00 0.00 31.04 4.00
653 678 3.053544 TCAAGTTGGTTTTGGTCCCAGTA 60.054 43.478 2.34 0.00 31.04 2.74
654 679 3.673543 AGTTGGTTTTGGTCCCAGTAA 57.326 42.857 0.00 0.00 31.04 2.24
655 680 3.983821 AGTTGGTTTTGGTCCCAGTAAA 58.016 40.909 0.00 0.00 31.04 2.01
656 681 3.702548 AGTTGGTTTTGGTCCCAGTAAAC 59.297 43.478 5.44 5.44 31.04 2.01
657 682 3.673543 TGGTTTTGGTCCCAGTAAACT 57.326 42.857 11.46 0.00 31.23 2.66
658 683 3.292460 TGGTTTTGGTCCCAGTAAACTG 58.708 45.455 11.46 3.02 43.40 3.16
659 684 2.035449 GGTTTTGGTCCCAGTAAACTGC 59.965 50.000 4.53 0.00 42.47 4.40
671 696 0.109272 TAAACTGCGAGGCGAGAGTG 60.109 55.000 0.00 0.00 0.00 3.51
707 732 5.593095 CCACTGTCATTTCATGATTCCTCAT 59.407 40.000 0.00 0.00 43.02 2.90
821 852 2.496070 CCCTCCTACGTCAAATCACTCA 59.504 50.000 0.00 0.00 0.00 3.41
824 855 4.416620 CTCCTACGTCAAATCACTCACTC 58.583 47.826 0.00 0.00 0.00 3.51
826 857 4.156190 TCCTACGTCAAATCACTCACTCTC 59.844 45.833 0.00 0.00 0.00 3.20
830 861 4.083003 ACGTCAAATCACTCACTCTCTCTC 60.083 45.833 0.00 0.00 0.00 3.20
831 862 4.155826 CGTCAAATCACTCACTCTCTCTCT 59.844 45.833 0.00 0.00 0.00 3.10
832 863 5.640732 GTCAAATCACTCACTCTCTCTCTC 58.359 45.833 0.00 0.00 0.00 3.20
833 864 5.415701 GTCAAATCACTCACTCTCTCTCTCT 59.584 44.000 0.00 0.00 0.00 3.10
834 865 5.647658 TCAAATCACTCACTCTCTCTCTCTC 59.352 44.000 0.00 0.00 0.00 3.20
835 866 5.441718 AATCACTCACTCTCTCTCTCTCT 57.558 43.478 0.00 0.00 0.00 3.10
836 867 4.471904 TCACTCACTCTCTCTCTCTCTC 57.528 50.000 0.00 0.00 0.00 3.20
837 868 4.096681 TCACTCACTCTCTCTCTCTCTCT 58.903 47.826 0.00 0.00 0.00 3.10
838 869 4.160439 TCACTCACTCTCTCTCTCTCTCTC 59.840 50.000 0.00 0.00 0.00 3.20
839 870 4.161189 CACTCACTCTCTCTCTCTCTCTCT 59.839 50.000 0.00 0.00 0.00 3.10
840 871 4.404073 ACTCACTCTCTCTCTCTCTCTCTC 59.596 50.000 0.00 0.00 0.00 3.20
841 872 4.614475 TCACTCTCTCTCTCTCTCTCTCT 58.386 47.826 0.00 0.00 0.00 3.10
842 873 4.646945 TCACTCTCTCTCTCTCTCTCTCTC 59.353 50.000 0.00 0.00 0.00 3.20
843 874 4.648762 CACTCTCTCTCTCTCTCTCTCTCT 59.351 50.000 0.00 0.00 0.00 3.10
844 875 4.892934 ACTCTCTCTCTCTCTCTCTCTCTC 59.107 50.000 0.00 0.00 0.00 3.20
845 876 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
846 877 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
847 878 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
848 879 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
849 880 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
850 881 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
851 882 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
852 883 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
853 884 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
933 964 0.741221 GTTGCCAACCAACGCCAAAA 60.741 50.000 0.00 0.00 43.85 2.44
949 980 1.257936 CAAAACTCACCACTGTCGTCG 59.742 52.381 0.00 0.00 0.00 5.12
954 987 1.440518 CACCACTGTCGTCGTCTCG 60.441 63.158 0.00 0.00 0.00 4.04
1012 1045 1.743394 CTCCAACCAATTTCTACGCCC 59.257 52.381 0.00 0.00 0.00 6.13
1013 1046 1.074084 TCCAACCAATTTCTACGCCCA 59.926 47.619 0.00 0.00 0.00 5.36
1014 1047 2.099405 CCAACCAATTTCTACGCCCAT 58.901 47.619 0.00 0.00 0.00 4.00
1015 1048 3.054287 TCCAACCAATTTCTACGCCCATA 60.054 43.478 0.00 0.00 0.00 2.74
1016 1049 3.315191 CCAACCAATTTCTACGCCCATAG 59.685 47.826 0.00 0.00 0.00 2.23
1036 1069 1.518367 GGGGGAGAGAGAGAGAGAGA 58.482 60.000 0.00 0.00 0.00 3.10
1037 1070 1.421646 GGGGGAGAGAGAGAGAGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
1038 1071 2.408565 GGGGAGAGAGAGAGAGAGAGA 58.591 57.143 0.00 0.00 0.00 3.10
1039 1072 2.370189 GGGGAGAGAGAGAGAGAGAGAG 59.630 59.091 0.00 0.00 0.00 3.20
1040 1073 3.309296 GGGAGAGAGAGAGAGAGAGAGA 58.691 54.545 0.00 0.00 0.00 3.10
1041 1074 3.711704 GGGAGAGAGAGAGAGAGAGAGAA 59.288 52.174 0.00 0.00 0.00 2.87
1042 1075 4.164221 GGGAGAGAGAGAGAGAGAGAGAAA 59.836 50.000 0.00 0.00 0.00 2.52
1043 1076 5.363939 GGAGAGAGAGAGAGAGAGAGAAAG 58.636 50.000 0.00 0.00 0.00 2.62
1044 1077 5.129485 GGAGAGAGAGAGAGAGAGAGAAAGA 59.871 48.000 0.00 0.00 0.00 2.52
1045 1078 6.232581 AGAGAGAGAGAGAGAGAGAAAGAG 57.767 45.833 0.00 0.00 0.00 2.85
1046 1079 5.960811 AGAGAGAGAGAGAGAGAGAAAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
1047 1080 6.098124 AGAGAGAGAGAGAGAGAGAAAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
1048 1081 5.960811 AGAGAGAGAGAGAGAGAAAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
1049 1082 6.098124 AGAGAGAGAGAGAGAGAAAGAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
1050 1083 5.960811 AGAGAGAGAGAGAGAAAGAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
1061 1094 6.098124 AGAGAAAGAGAGAGAGAGAGAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
1063 1096 6.441924 AGAAAGAGAGAGAGAGAGAGAGAGAA 59.558 42.308 0.00 0.00 0.00 2.87
1167 1200 3.359523 CTCGTCGTCCCGTCACCA 61.360 66.667 0.00 0.00 0.00 4.17
1171 1204 2.036731 TCGTCCCGTCACCATCCT 59.963 61.111 0.00 0.00 0.00 3.24
1432 1477 4.345257 TCTCTGTCTTTGCAAAGTCTACCT 59.655 41.667 32.46 0.00 37.31 3.08
1433 1478 4.380531 TCTGTCTTTGCAAAGTCTACCTG 58.619 43.478 32.46 19.92 37.31 4.00
1454 1499 4.460263 TGACTGGTGCAGTGTAATTTTCT 58.540 39.130 0.00 0.00 45.44 2.52
1508 1553 9.893634 TTCCTTATTGATTTTGCATTGATTGAT 57.106 25.926 0.00 0.00 0.00 2.57
1531 1576 0.394192 TGGGCTGTCTCTGTGTCTTG 59.606 55.000 0.00 0.00 0.00 3.02
1556 1601 8.465999 TGTTGGTGTTCAATTTGGTCATATATC 58.534 33.333 0.00 0.00 37.73 1.63
1557 1602 7.581213 TGGTGTTCAATTTGGTCATATATCC 57.419 36.000 0.00 0.00 0.00 2.59
1558 1603 7.353525 TGGTGTTCAATTTGGTCATATATCCT 58.646 34.615 0.00 0.00 0.00 3.24
1560 1605 8.695456 GGTGTTCAATTTGGTCATATATCCTTT 58.305 33.333 0.00 0.00 0.00 3.11
1562 1607 9.699410 TGTTCAATTTGGTCATATATCCTTTCT 57.301 29.630 0.00 0.00 0.00 2.52
1580 1628 6.071503 TCCTTTCTAACTTACAGTAGCCTGAC 60.072 42.308 0.00 0.00 41.50 3.51
1604 1652 1.564348 AGGTTGTCAAGAACCCACTGT 59.436 47.619 5.51 0.00 45.85 3.55
1606 1654 3.201266 AGGTTGTCAAGAACCCACTGTTA 59.799 43.478 5.51 0.00 45.85 2.41
1661 1717 9.342308 TCAGAACAGAGATTGACAAAATTTAGT 57.658 29.630 0.00 0.00 0.00 2.24
1691 1747 8.262933 ACCATATACTCACTTACTACCAAAACC 58.737 37.037 0.00 0.00 0.00 3.27
1709 1765 4.657436 AACCTGGTTTTATTCGTTGCAA 57.343 36.364 6.18 0.00 0.00 4.08
1749 1805 5.516044 ACTCTTTTTGGGGAAGTTTACAGT 58.484 37.500 0.00 0.00 0.00 3.55
1750 1806 5.359860 ACTCTTTTTGGGGAAGTTTACAGTG 59.640 40.000 0.00 0.00 0.00 3.66
1760 1816 4.511826 GGAAGTTTACAGTGGTTCACTCAG 59.488 45.833 0.00 0.00 43.43 3.35
1766 1822 3.467803 ACAGTGGTTCACTCAGTTTAGC 58.532 45.455 0.00 0.00 43.43 3.09
1786 1842 1.812571 CCACTCGTTCAAGGGGATTTG 59.187 52.381 0.00 0.00 43.02 2.32
1798 1854 3.648528 GGATTTGCGCTTTCCCATC 57.351 52.632 9.73 0.86 0.00 3.51
1812 1868 3.587797 TCCCATCGTAACTGAACTGTC 57.412 47.619 0.00 0.00 0.00 3.51
1824 1891 0.598065 GAACTGTCCATGTTGGTGCC 59.402 55.000 0.00 0.00 39.03 5.01
1829 1896 1.327303 GTCCATGTTGGTGCCAAGAA 58.673 50.000 3.57 0.00 39.03 2.52
1843 1910 2.935481 CAAGAATTGCAGCTTCCTCC 57.065 50.000 7.31 0.00 40.39 4.30
1844 1911 2.165167 CAAGAATTGCAGCTTCCTCCA 58.835 47.619 7.31 0.00 40.39 3.86
1878 1945 1.269448 GAAAAAGGAGCATCGTTGGCA 59.731 47.619 0.00 0.00 43.22 4.92
1932 2003 2.091852 GTGCAACTCTTCCTCCTGAG 57.908 55.000 0.00 0.00 36.47 3.35
1933 2004 0.322975 TGCAACTCTTCCTCCTGAGC 59.677 55.000 0.00 0.00 33.92 4.26
1934 2005 0.392327 GCAACTCTTCCTCCTGAGCC 60.392 60.000 0.00 0.00 33.92 4.70
1935 2006 1.274712 CAACTCTTCCTCCTGAGCCT 58.725 55.000 0.00 0.00 33.92 4.58
1936 2007 1.066286 CAACTCTTCCTCCTGAGCCTG 60.066 57.143 0.00 0.00 33.92 4.85
1937 2008 0.617249 ACTCTTCCTCCTGAGCCTGG 60.617 60.000 0.00 0.00 33.92 4.45
1938 2009 1.970352 CTCTTCCTCCTGAGCCTGGC 61.970 65.000 11.65 11.65 0.00 4.85
1950 2021 0.407139 AGCCTGGCAACCTGAAGAAT 59.593 50.000 22.65 0.00 0.00 2.40
1974 2045 6.518208 TTTCAACCGGTTTTATATTGGGAG 57.482 37.500 19.55 1.38 0.00 4.30
1976 2047 5.187687 TCAACCGGTTTTATATTGGGAGTC 58.812 41.667 19.55 0.00 0.00 3.36
1977 2048 5.045432 TCAACCGGTTTTATATTGGGAGTCT 60.045 40.000 19.55 0.00 0.00 3.24
1978 2049 5.032327 ACCGGTTTTATATTGGGAGTCTC 57.968 43.478 0.00 0.00 0.00 3.36
1979 2050 4.720273 ACCGGTTTTATATTGGGAGTCTCT 59.280 41.667 0.00 0.00 0.00 3.10
1980 2051 5.163332 ACCGGTTTTATATTGGGAGTCTCTC 60.163 44.000 0.00 0.00 0.00 3.20
1992 2063 4.041567 TGGGAGTCTCTCTCTATAGCTCAG 59.958 50.000 0.40 0.00 42.40 3.35
1995 2066 5.470098 GGAGTCTCTCTCTATAGCTCAGTTG 59.530 48.000 0.00 0.00 42.40 3.16
2003 2074 7.931407 TCTCTCTATAGCTCAGTTGACTTAGAG 59.069 40.741 0.00 8.16 35.08 2.43
2006 2077 8.988546 TCTATAGCTCAGTTGACTTAGAGATT 57.011 34.615 0.00 0.00 0.00 2.40
2025 2096 8.316640 AGAGATTGTTATTTCTCAGTCAACAC 57.683 34.615 3.08 0.00 40.69 3.32
2035 2106 2.957576 CAGTCAACACTGTTAGCAGC 57.042 50.000 6.48 0.00 46.30 5.25
2036 2107 1.532868 CAGTCAACACTGTTAGCAGCC 59.467 52.381 6.48 0.00 46.30 4.85
2037 2108 0.875059 GTCAACACTGTTAGCAGCCC 59.125 55.000 6.48 0.00 46.30 5.19
2038 2109 0.472044 TCAACACTGTTAGCAGCCCA 59.528 50.000 6.48 0.00 46.30 5.36
2039 2110 1.133945 TCAACACTGTTAGCAGCCCAA 60.134 47.619 6.48 0.00 46.30 4.12
2040 2111 1.888512 CAACACTGTTAGCAGCCCAAT 59.111 47.619 6.48 0.00 46.30 3.16
2041 2112 1.826385 ACACTGTTAGCAGCCCAATC 58.174 50.000 6.48 0.00 46.30 2.67
2042 2113 1.073763 ACACTGTTAGCAGCCCAATCA 59.926 47.619 6.48 0.00 46.30 2.57
2043 2114 1.741706 CACTGTTAGCAGCCCAATCAG 59.258 52.381 6.48 0.00 46.30 2.90
2044 2115 1.352352 ACTGTTAGCAGCCCAATCAGT 59.648 47.619 6.48 0.00 46.30 3.41
2045 2116 2.571653 ACTGTTAGCAGCCCAATCAGTA 59.428 45.455 6.48 0.00 46.30 2.74
2046 2117 2.939103 CTGTTAGCAGCCCAATCAGTAC 59.061 50.000 0.00 0.00 35.77 2.73
2047 2118 2.571653 TGTTAGCAGCCCAATCAGTACT 59.428 45.455 0.00 0.00 0.00 2.73
2048 2119 2.939103 GTTAGCAGCCCAATCAGTACTG 59.061 50.000 17.17 17.17 0.00 2.74
2049 2120 0.987294 AGCAGCCCAATCAGTACTGT 59.013 50.000 21.99 7.40 0.00 3.55
2050 2121 2.187958 AGCAGCCCAATCAGTACTGTA 58.812 47.619 21.99 9.79 0.00 2.74
2051 2122 2.774234 AGCAGCCCAATCAGTACTGTAT 59.226 45.455 21.99 11.58 0.00 2.29
2052 2123 3.134458 GCAGCCCAATCAGTACTGTATC 58.866 50.000 21.99 7.33 0.00 2.24
2053 2124 3.181461 GCAGCCCAATCAGTACTGTATCT 60.181 47.826 21.99 9.25 0.00 1.98
2054 2125 4.684485 GCAGCCCAATCAGTACTGTATCTT 60.684 45.833 21.99 9.30 0.00 2.40
2055 2126 5.053145 CAGCCCAATCAGTACTGTATCTTC 58.947 45.833 21.99 9.22 0.00 2.87
2056 2127 4.965532 AGCCCAATCAGTACTGTATCTTCT 59.034 41.667 21.99 11.13 0.00 2.85
2057 2128 5.426833 AGCCCAATCAGTACTGTATCTTCTT 59.573 40.000 21.99 3.95 0.00 2.52
2058 2129 6.611642 AGCCCAATCAGTACTGTATCTTCTTA 59.388 38.462 21.99 0.05 0.00 2.10
2059 2130 6.926272 GCCCAATCAGTACTGTATCTTCTTAG 59.074 42.308 21.99 4.18 0.00 2.18
2060 2131 6.926272 CCCAATCAGTACTGTATCTTCTTAGC 59.074 42.308 21.99 0.00 0.00 3.09
2061 2132 6.926272 CCAATCAGTACTGTATCTTCTTAGCC 59.074 42.308 21.99 0.00 0.00 3.93
2062 2133 7.417911 CCAATCAGTACTGTATCTTCTTAGCCA 60.418 40.741 21.99 0.00 0.00 4.75
2063 2134 6.452494 TCAGTACTGTATCTTCTTAGCCAC 57.548 41.667 21.99 0.00 0.00 5.01
2064 2135 5.949952 TCAGTACTGTATCTTCTTAGCCACA 59.050 40.000 21.99 0.00 0.00 4.17
2065 2136 6.607600 TCAGTACTGTATCTTCTTAGCCACAT 59.392 38.462 21.99 0.00 0.00 3.21
2066 2137 7.124298 TCAGTACTGTATCTTCTTAGCCACATT 59.876 37.037 21.99 0.00 0.00 2.71
2067 2138 7.766278 CAGTACTGTATCTTCTTAGCCACATTT 59.234 37.037 15.06 0.00 0.00 2.32
2068 2139 6.992063 ACTGTATCTTCTTAGCCACATTTG 57.008 37.500 0.00 0.00 0.00 2.32
2069 2140 6.711277 ACTGTATCTTCTTAGCCACATTTGA 58.289 36.000 0.00 0.00 0.00 2.69
2070 2141 6.820656 ACTGTATCTTCTTAGCCACATTTGAG 59.179 38.462 0.00 0.00 0.00 3.02
2071 2142 5.586243 TGTATCTTCTTAGCCACATTTGAGC 59.414 40.000 0.00 0.00 0.00 4.26
2072 2143 4.292186 TCTTCTTAGCCACATTTGAGCT 57.708 40.909 0.00 0.00 40.66 4.09
2073 2144 4.655963 TCTTCTTAGCCACATTTGAGCTT 58.344 39.130 0.00 0.00 38.06 3.74
2074 2145 4.456911 TCTTCTTAGCCACATTTGAGCTTG 59.543 41.667 0.00 0.00 38.06 4.01
2075 2146 2.489329 TCTTAGCCACATTTGAGCTTGC 59.511 45.455 0.00 0.00 38.06 4.01
2076 2147 1.908344 TAGCCACATTTGAGCTTGCA 58.092 45.000 0.00 0.00 38.06 4.08
2077 2148 0.601558 AGCCACATTTGAGCTTGCAG 59.398 50.000 0.00 0.00 31.27 4.41
2078 2149 0.389426 GCCACATTTGAGCTTGCAGG 60.389 55.000 0.00 0.00 0.00 4.85
2079 2150 1.250328 CCACATTTGAGCTTGCAGGA 58.750 50.000 0.00 0.00 0.00 3.86
2080 2151 1.614903 CCACATTTGAGCTTGCAGGAA 59.385 47.619 0.00 0.00 0.00 3.36
2081 2152 2.232941 CCACATTTGAGCTTGCAGGAAT 59.767 45.455 0.00 0.00 0.00 3.01
2082 2153 3.250744 CACATTTGAGCTTGCAGGAATG 58.749 45.455 0.00 3.21 0.00 2.67
2083 2154 2.268298 CATTTGAGCTTGCAGGAATGC 58.732 47.619 0.00 0.00 0.00 3.56
2084 2155 0.604578 TTTGAGCTTGCAGGAATGCC 59.395 50.000 0.00 0.00 0.00 4.40
2085 2156 0.540133 TTGAGCTTGCAGGAATGCCA 60.540 50.000 0.00 0.00 36.29 4.92
2086 2157 0.323999 TGAGCTTGCAGGAATGCCAT 60.324 50.000 0.00 0.00 36.29 4.40
2087 2158 0.102481 GAGCTTGCAGGAATGCCATG 59.898 55.000 0.00 0.00 36.29 3.66
2088 2159 0.613853 AGCTTGCAGGAATGCCATGT 60.614 50.000 0.00 0.00 36.29 3.21
2089 2160 0.248289 GCTTGCAGGAATGCCATGTT 59.752 50.000 0.00 0.00 36.29 2.71
2090 2161 1.338389 GCTTGCAGGAATGCCATGTTT 60.338 47.619 0.00 0.00 36.29 2.83
2091 2162 2.094078 GCTTGCAGGAATGCCATGTTTA 60.094 45.455 0.00 0.00 36.29 2.01
2092 2163 3.777478 CTTGCAGGAATGCCATGTTTAG 58.223 45.455 0.00 0.00 36.29 1.85
2093 2164 3.084536 TGCAGGAATGCCATGTTTAGA 57.915 42.857 0.00 0.00 36.29 2.10
2094 2165 3.634504 TGCAGGAATGCCATGTTTAGAT 58.365 40.909 0.00 0.00 36.29 1.98
2095 2166 4.025360 TGCAGGAATGCCATGTTTAGATT 58.975 39.130 0.00 0.00 36.29 2.40
2096 2167 4.142116 TGCAGGAATGCCATGTTTAGATTG 60.142 41.667 0.00 0.00 36.29 2.67
2097 2168 4.098349 GCAGGAATGCCATGTTTAGATTGA 59.902 41.667 0.00 0.00 36.29 2.57
2098 2169 5.394443 GCAGGAATGCCATGTTTAGATTGAA 60.394 40.000 0.00 0.00 36.29 2.69
2099 2170 6.038356 CAGGAATGCCATGTTTAGATTGAAC 58.962 40.000 0.00 0.00 36.29 3.18
2100 2171 5.036737 GGAATGCCATGTTTAGATTGAACG 58.963 41.667 0.00 0.00 0.00 3.95
2101 2172 4.637483 ATGCCATGTTTAGATTGAACGG 57.363 40.909 0.00 0.00 0.00 4.44
2102 2173 3.417101 TGCCATGTTTAGATTGAACGGT 58.583 40.909 0.00 0.00 0.00 4.83
2103 2174 3.438781 TGCCATGTTTAGATTGAACGGTC 59.561 43.478 0.00 0.00 0.00 4.79
2104 2175 3.689649 GCCATGTTTAGATTGAACGGTCT 59.310 43.478 0.33 0.00 0.00 3.85
2105 2176 4.156008 GCCATGTTTAGATTGAACGGTCTT 59.844 41.667 0.33 0.00 0.00 3.01
2106 2177 5.353123 GCCATGTTTAGATTGAACGGTCTTA 59.647 40.000 0.33 0.00 0.00 2.10
2107 2178 6.456988 GCCATGTTTAGATTGAACGGTCTTAG 60.457 42.308 0.33 0.00 0.00 2.18
2108 2179 6.456988 CCATGTTTAGATTGAACGGTCTTAGC 60.457 42.308 0.33 0.00 0.00 3.09
2109 2180 5.790593 TGTTTAGATTGAACGGTCTTAGCT 58.209 37.500 0.33 0.16 0.00 3.32
2110 2181 5.637810 TGTTTAGATTGAACGGTCTTAGCTG 59.362 40.000 0.33 0.00 0.00 4.24
2111 2182 3.963428 AGATTGAACGGTCTTAGCTGT 57.037 42.857 0.33 0.00 0.00 4.40
2112 2183 3.589988 AGATTGAACGGTCTTAGCTGTG 58.410 45.455 0.33 0.00 0.00 3.66
2113 2184 3.258372 AGATTGAACGGTCTTAGCTGTGA 59.742 43.478 0.33 0.00 0.00 3.58
2114 2185 2.433868 TGAACGGTCTTAGCTGTGAC 57.566 50.000 0.33 11.10 0.00 3.67
2115 2186 1.961394 TGAACGGTCTTAGCTGTGACT 59.039 47.619 16.72 2.19 34.01 3.41
2116 2187 2.364324 TGAACGGTCTTAGCTGTGACTT 59.636 45.455 16.72 7.61 34.01 3.01
2117 2188 2.440539 ACGGTCTTAGCTGTGACTTG 57.559 50.000 16.72 13.04 34.01 3.16
2118 2189 1.000955 ACGGTCTTAGCTGTGACTTGG 59.999 52.381 16.72 10.89 34.01 3.61
2119 2190 1.443802 GGTCTTAGCTGTGACTTGGC 58.556 55.000 16.72 1.72 34.01 4.52
2120 2191 1.071605 GTCTTAGCTGTGACTTGGCG 58.928 55.000 11.97 0.00 0.00 5.69
2121 2192 0.966179 TCTTAGCTGTGACTTGGCGA 59.034 50.000 0.00 0.00 0.00 5.54
2122 2193 1.550524 TCTTAGCTGTGACTTGGCGAT 59.449 47.619 0.00 0.00 0.00 4.58
2123 2194 2.758423 TCTTAGCTGTGACTTGGCGATA 59.242 45.455 0.00 0.00 0.00 2.92
2124 2195 2.871182 TAGCTGTGACTTGGCGATAG 57.129 50.000 0.00 0.00 0.00 2.08
2125 2196 0.898320 AGCTGTGACTTGGCGATAGT 59.102 50.000 0.00 0.00 39.35 2.12
2126 2197 1.276421 AGCTGTGACTTGGCGATAGTT 59.724 47.619 0.00 0.00 39.35 2.24
2127 2198 2.496070 AGCTGTGACTTGGCGATAGTTA 59.504 45.455 0.00 0.00 39.35 2.24
2128 2199 3.133003 AGCTGTGACTTGGCGATAGTTAT 59.867 43.478 0.00 0.00 39.35 1.89
2129 2200 3.871594 GCTGTGACTTGGCGATAGTTATT 59.128 43.478 0.00 0.00 39.35 1.40
2130 2201 4.332819 GCTGTGACTTGGCGATAGTTATTT 59.667 41.667 0.00 0.00 39.35 1.40
2131 2202 5.502544 GCTGTGACTTGGCGATAGTTATTTC 60.503 44.000 0.00 0.00 39.35 2.17
2132 2203 5.730550 TGTGACTTGGCGATAGTTATTTCT 58.269 37.500 0.00 0.00 39.35 2.52
2133 2204 5.810587 TGTGACTTGGCGATAGTTATTTCTC 59.189 40.000 0.00 0.00 39.35 2.87
2134 2205 5.810587 GTGACTTGGCGATAGTTATTTCTCA 59.189 40.000 0.00 0.00 39.35 3.27
2135 2206 6.019479 GTGACTTGGCGATAGTTATTTCTCAG 60.019 42.308 0.00 0.00 39.35 3.35
2136 2207 5.978814 ACTTGGCGATAGTTATTTCTCAGT 58.021 37.500 0.00 0.00 39.35 3.41
2137 2208 6.043411 ACTTGGCGATAGTTATTTCTCAGTC 58.957 40.000 0.00 0.00 39.35 3.51
2138 2209 5.592104 TGGCGATAGTTATTTCTCAGTCA 57.408 39.130 0.00 0.00 39.35 3.41
2139 2210 6.161855 TGGCGATAGTTATTTCTCAGTCAT 57.838 37.500 0.00 0.00 39.35 3.06
2140 2211 7.284919 TGGCGATAGTTATTTCTCAGTCATA 57.715 36.000 0.00 0.00 39.35 2.15
2141 2212 7.896811 TGGCGATAGTTATTTCTCAGTCATAT 58.103 34.615 0.00 0.00 39.35 1.78
2142 2213 7.814587 TGGCGATAGTTATTTCTCAGTCATATG 59.185 37.037 0.00 0.00 39.35 1.78
2143 2214 8.029522 GGCGATAGTTATTTCTCAGTCATATGA 58.970 37.037 0.00 0.00 39.35 2.15
2144 2215 9.071221 GCGATAGTTATTTCTCAGTCATATGAG 57.929 37.037 5.42 0.00 42.94 2.90
2158 2229 9.681692 TCAGTCATATGAGAAACAACAAAATTG 57.318 29.630 5.42 0.00 0.00 2.32
2159 2230 9.467258 CAGTCATATGAGAAACAACAAAATTGT 57.533 29.630 5.42 0.00 44.72 2.71
2195 2266 9.998106 TTACTCCCTCTATATCAAAATAAGTGC 57.002 33.333 0.00 0.00 0.00 4.40
2196 2267 7.454225 ACTCCCTCTATATCAAAATAAGTGCC 58.546 38.462 0.00 0.00 0.00 5.01
2197 2268 6.464222 TCCCTCTATATCAAAATAAGTGCCG 58.536 40.000 0.00 0.00 0.00 5.69
2198 2269 5.122396 CCCTCTATATCAAAATAAGTGCCGC 59.878 44.000 0.00 0.00 0.00 6.53
2199 2270 5.122396 CCTCTATATCAAAATAAGTGCCGCC 59.878 44.000 0.00 0.00 0.00 6.13
2200 2271 3.896648 ATATCAAAATAAGTGCCGCCG 57.103 42.857 0.00 0.00 0.00 6.46
2201 2272 1.745232 ATCAAAATAAGTGCCGCCGA 58.255 45.000 0.00 0.00 0.00 5.54
2202 2273 0.800012 TCAAAATAAGTGCCGCCGAC 59.200 50.000 0.00 0.00 0.00 4.79
2203 2274 0.802494 CAAAATAAGTGCCGCCGACT 59.198 50.000 0.00 0.00 0.00 4.18
2204 2275 1.199097 CAAAATAAGTGCCGCCGACTT 59.801 47.619 2.07 2.07 37.43 3.01
2205 2276 2.389962 AAATAAGTGCCGCCGACTTA 57.610 45.000 5.94 5.94 39.60 2.24
2206 2277 1.935933 AATAAGTGCCGCCGACTTAG 58.064 50.000 8.71 0.00 38.87 2.18
2207 2278 0.822164 ATAAGTGCCGCCGACTTAGT 59.178 50.000 8.71 0.00 38.87 2.24
2208 2279 1.462616 TAAGTGCCGCCGACTTAGTA 58.537 50.000 0.34 0.00 35.30 1.82
2209 2280 0.108945 AAGTGCCGCCGACTTAGTAC 60.109 55.000 0.00 0.00 31.72 2.73
2210 2281 1.213537 GTGCCGCCGACTTAGTACA 59.786 57.895 0.00 0.00 0.00 2.90
2211 2282 0.388907 GTGCCGCCGACTTAGTACAA 60.389 55.000 0.00 0.00 0.00 2.41
2212 2283 0.388907 TGCCGCCGACTTAGTACAAC 60.389 55.000 0.00 0.00 0.00 3.32
2213 2284 0.108945 GCCGCCGACTTAGTACAACT 60.109 55.000 0.00 0.00 0.00 3.16
2214 2285 1.670967 GCCGCCGACTTAGTACAACTT 60.671 52.381 0.00 0.00 0.00 2.66
2215 2286 2.680577 CCGCCGACTTAGTACAACTTT 58.319 47.619 0.00 0.00 0.00 2.66
2216 2287 2.410730 CCGCCGACTTAGTACAACTTTG 59.589 50.000 0.00 0.00 0.00 2.77
2217 2288 3.054878 CGCCGACTTAGTACAACTTTGT 58.945 45.455 0.00 0.00 44.86 2.83
2218 2289 4.229096 CGCCGACTTAGTACAACTTTGTA 58.771 43.478 0.00 0.00 42.35 2.41
2240 2311 8.550710 TGTACTAAGTTGTTGTACAAAGTTGT 57.449 30.769 10.51 8.44 42.07 3.32
2241 2312 9.650539 TGTACTAAGTTGTTGTACAAAGTTGTA 57.349 29.630 10.51 7.63 42.07 2.41
2254 2325 6.224420 ACAAAGTTGTACTAAATCAGCGAC 57.776 37.500 0.00 0.00 40.16 5.19
2255 2326 5.756347 ACAAAGTTGTACTAAATCAGCGACA 59.244 36.000 0.00 0.00 40.16 4.35
2256 2327 5.840940 AAGTTGTACTAAATCAGCGACAC 57.159 39.130 0.00 0.00 0.00 3.67
2257 2328 5.135508 AGTTGTACTAAATCAGCGACACT 57.864 39.130 0.00 0.00 0.00 3.55
2258 2329 5.539048 AGTTGTACTAAATCAGCGACACTT 58.461 37.500 0.00 0.00 0.00 3.16
2259 2330 6.684686 AGTTGTACTAAATCAGCGACACTTA 58.315 36.000 0.00 0.00 0.00 2.24
2260 2331 7.321153 AGTTGTACTAAATCAGCGACACTTAT 58.679 34.615 0.00 0.00 0.00 1.73
2261 2332 7.817962 AGTTGTACTAAATCAGCGACACTTATT 59.182 33.333 0.00 0.00 0.00 1.40
2262 2333 8.440833 GTTGTACTAAATCAGCGACACTTATTT 58.559 33.333 0.00 0.00 36.43 1.40
2263 2334 8.542497 TGTACTAAATCAGCGACACTTATTTT 57.458 30.769 0.00 0.00 34.69 1.82
2264 2335 9.642327 TGTACTAAATCAGCGACACTTATTTTA 57.358 29.630 0.00 0.00 34.69 1.52
2266 2337 8.773404 ACTAAATCAGCGACACTTATTTTAGT 57.227 30.769 0.00 0.00 34.69 2.24
2267 2338 9.865321 ACTAAATCAGCGACACTTATTTTAGTA 57.135 29.630 0.00 0.00 35.26 1.82
2269 2340 6.807708 ATCAGCGACACTTATTTTAGTACG 57.192 37.500 0.00 0.00 33.47 3.67
2270 2341 5.941733 TCAGCGACACTTATTTTAGTACGA 58.058 37.500 0.00 0.00 32.70 3.43
2271 2342 6.380995 TCAGCGACACTTATTTTAGTACGAA 58.619 36.000 0.00 0.00 32.70 3.85
2272 2343 6.525628 TCAGCGACACTTATTTTAGTACGAAG 59.474 38.462 0.00 0.00 32.70 3.79
2273 2344 5.803967 AGCGACACTTATTTTAGTACGAAGG 59.196 40.000 0.00 0.00 32.70 3.46
2274 2345 5.005107 GCGACACTTATTTTAGTACGAAGGG 59.995 44.000 0.00 0.00 32.70 3.95
2275 2346 6.324819 CGACACTTATTTTAGTACGAAGGGA 58.675 40.000 0.00 0.00 32.70 4.20
2276 2347 6.471519 CGACACTTATTTTAGTACGAAGGGAG 59.528 42.308 0.00 0.00 32.70 4.30
2277 2348 7.237209 ACACTTATTTTAGTACGAAGGGAGT 57.763 36.000 0.00 0.00 0.00 3.85
2278 2349 8.353423 ACACTTATTTTAGTACGAAGGGAGTA 57.647 34.615 0.00 0.00 0.00 2.59
2279 2350 8.975295 ACACTTATTTTAGTACGAAGGGAGTAT 58.025 33.333 0.00 0.00 0.00 2.12
2291 2362 9.367444 GTACGAAGGGAGTATAAATAATCATGG 57.633 37.037 0.00 0.00 0.00 3.66
2292 2363 7.974504 ACGAAGGGAGTATAAATAATCATGGT 58.025 34.615 0.00 0.00 0.00 3.55
2293 2364 8.095169 ACGAAGGGAGTATAAATAATCATGGTC 58.905 37.037 0.00 0.00 0.00 4.02
2294 2365 8.094548 CGAAGGGAGTATAAATAATCATGGTCA 58.905 37.037 0.00 0.00 0.00 4.02
2295 2366 9.793259 GAAGGGAGTATAAATAATCATGGTCAA 57.207 33.333 0.00 0.00 0.00 3.18
2303 2374 8.924511 ATAAATAATCATGGTCAAATCCTCGT 57.075 30.769 0.00 0.00 0.00 4.18
2305 2376 8.924511 AAATAATCATGGTCAAATCCTCGTAT 57.075 30.769 0.00 0.00 0.00 3.06
2308 2379 7.912056 AATCATGGTCAAATCCTCGTATATG 57.088 36.000 0.00 0.00 0.00 1.78
2309 2380 6.419484 TCATGGTCAAATCCTCGTATATGT 57.581 37.500 0.00 0.00 0.00 2.29
2310 2381 7.533289 TCATGGTCAAATCCTCGTATATGTA 57.467 36.000 0.00 0.00 0.00 2.29
2311 2382 7.602753 TCATGGTCAAATCCTCGTATATGTAG 58.397 38.462 0.00 0.00 0.00 2.74
2312 2383 6.340962 TGGTCAAATCCTCGTATATGTAGG 57.659 41.667 4.79 4.79 0.00 3.18
2313 2384 6.072649 TGGTCAAATCCTCGTATATGTAGGA 58.927 40.000 12.65 12.65 43.38 2.94
2314 2385 6.015688 TGGTCAAATCCTCGTATATGTAGGAC 60.016 42.308 12.57 0.00 42.08 3.85
2315 2386 6.208994 GGTCAAATCCTCGTATATGTAGGACT 59.791 42.308 12.57 3.17 42.08 3.85
2316 2387 7.085116 GTCAAATCCTCGTATATGTAGGACTG 58.915 42.308 12.57 12.53 42.08 3.51
2317 2388 7.002276 TCAAATCCTCGTATATGTAGGACTGA 58.998 38.462 12.57 13.89 42.08 3.41
2318 2389 7.670140 TCAAATCCTCGTATATGTAGGACTGAT 59.330 37.037 12.57 0.00 42.08 2.90
2319 2390 8.307483 CAAATCCTCGTATATGTAGGACTGATT 58.693 37.037 12.57 6.46 42.08 2.57
2320 2391 8.423906 AATCCTCGTATATGTAGGACTGATTT 57.576 34.615 12.57 4.14 42.08 2.17
2321 2392 9.529823 AATCCTCGTATATGTAGGACTGATTTA 57.470 33.333 12.57 0.00 42.08 1.40
2322 2393 9.702253 ATCCTCGTATATGTAGGACTGATTTAT 57.298 33.333 12.57 0.00 42.08 1.40
2323 2394 8.957466 TCCTCGTATATGTAGGACTGATTTATG 58.043 37.037 8.32 0.00 34.46 1.90
2324 2395 7.702772 CCTCGTATATGTAGGACTGATTTATGC 59.297 40.741 5.09 0.00 31.64 3.14
2325 2396 8.349568 TCGTATATGTAGGACTGATTTATGCT 57.650 34.615 0.00 0.00 0.00 3.79
2326 2397 8.803235 TCGTATATGTAGGACTGATTTATGCTT 58.197 33.333 0.00 0.00 0.00 3.91
2332 2403 9.712305 ATGTAGGACTGATTTATGCTTATGTAC 57.288 33.333 0.00 0.00 0.00 2.90
2333 2404 8.924303 TGTAGGACTGATTTATGCTTATGTACT 58.076 33.333 0.00 0.00 0.00 2.73
2334 2405 9.413048 GTAGGACTGATTTATGCTTATGTACTC 57.587 37.037 0.00 0.00 0.00 2.59
2335 2406 7.445945 AGGACTGATTTATGCTTATGTACTCC 58.554 38.462 0.00 0.00 0.00 3.85
2336 2407 7.291182 AGGACTGATTTATGCTTATGTACTCCT 59.709 37.037 0.00 0.00 0.00 3.69
2337 2408 7.934120 GGACTGATTTATGCTTATGTACTCCTT 59.066 37.037 0.00 0.00 0.00 3.36
2338 2409 9.331282 GACTGATTTATGCTTATGTACTCCTTT 57.669 33.333 0.00 0.00 0.00 3.11
2346 2417 8.807948 ATGCTTATGTACTCCTTTAATGTTGT 57.192 30.769 0.00 0.00 0.00 3.32
2347 2418 9.899661 ATGCTTATGTACTCCTTTAATGTTGTA 57.100 29.630 0.00 0.00 0.00 2.41
2348 2419 9.378551 TGCTTATGTACTCCTTTAATGTTGTAG 57.621 33.333 0.00 0.00 0.00 2.74
2349 2420 9.379791 GCTTATGTACTCCTTTAATGTTGTAGT 57.620 33.333 0.00 0.00 0.00 2.73
2354 2425 9.647797 TGTACTCCTTTAATGTTGTAGTACATG 57.352 33.333 3.28 0.00 41.51 3.21
2355 2426 9.649167 GTACTCCTTTAATGTTGTAGTACATGT 57.351 33.333 2.69 2.69 38.69 3.21
2356 2427 8.773404 ACTCCTTTAATGTTGTAGTACATGTC 57.227 34.615 0.00 0.00 38.69 3.06
2357 2428 8.594550 ACTCCTTTAATGTTGTAGTACATGTCT 58.405 33.333 0.00 2.11 38.69 3.41
2358 2429 9.436957 CTCCTTTAATGTTGTAGTACATGTCTT 57.563 33.333 0.00 0.00 38.69 3.01
2359 2430 9.787435 TCCTTTAATGTTGTAGTACATGTCTTT 57.213 29.630 0.00 5.68 38.69 2.52
2370 2441 9.398538 TGTAGTACATGTCTTTTTAAAACCTGT 57.601 29.630 0.00 2.84 0.00 4.00
2371 2442 9.659830 GTAGTACATGTCTTTTTAAAACCTGTG 57.340 33.333 0.00 0.00 0.00 3.66
2372 2443 8.288689 AGTACATGTCTTTTTAAAACCTGTGT 57.711 30.769 0.00 5.49 0.00 3.72
2373 2444 8.188139 AGTACATGTCTTTTTAAAACCTGTGTG 58.812 33.333 0.00 0.00 0.00 3.82
2374 2445 6.930731 ACATGTCTTTTTAAAACCTGTGTGT 58.069 32.000 0.00 0.00 0.00 3.72
2375 2446 7.382898 ACATGTCTTTTTAAAACCTGTGTGTT 58.617 30.769 0.00 0.00 0.00 3.32
2376 2447 8.524487 ACATGTCTTTTTAAAACCTGTGTGTTA 58.476 29.630 0.00 0.00 0.00 2.41
2377 2448 9.019764 CATGTCTTTTTAAAACCTGTGTGTTAG 57.980 33.333 0.00 0.00 0.00 2.34
2378 2449 8.113173 TGTCTTTTTAAAACCTGTGTGTTAGT 57.887 30.769 0.00 0.00 0.00 2.24
2379 2450 8.578151 TGTCTTTTTAAAACCTGTGTGTTAGTT 58.422 29.630 0.00 0.00 0.00 2.24
2398 2469 9.991388 TGTTAGTTAAACAGTTTATGTGTTGAC 57.009 29.630 6.58 0.81 43.22 3.18
2436 2507 6.751514 AAAAATATGTAACACCTCGCATGA 57.248 33.333 0.00 0.00 0.00 3.07
2437 2508 6.942532 AAAATATGTAACACCTCGCATGAT 57.057 33.333 0.00 0.00 0.00 2.45
2438 2509 8.445275 AAAAATATGTAACACCTCGCATGATA 57.555 30.769 0.00 0.00 0.00 2.15
2439 2510 8.445275 AAAATATGTAACACCTCGCATGATAA 57.555 30.769 0.00 0.00 0.00 1.75
2440 2511 8.445275 AAATATGTAACACCTCGCATGATAAA 57.555 30.769 0.00 0.00 0.00 1.40
2441 2512 8.621532 AATATGTAACACCTCGCATGATAAAT 57.378 30.769 0.00 0.00 0.00 1.40
2442 2513 9.719355 AATATGTAACACCTCGCATGATAAATA 57.281 29.630 0.00 0.00 0.00 1.40
2443 2514 6.838198 TGTAACACCTCGCATGATAAATAC 57.162 37.500 0.00 0.00 0.00 1.89
2444 2515 6.578944 TGTAACACCTCGCATGATAAATACT 58.421 36.000 0.00 0.00 0.00 2.12
2445 2516 7.718525 TGTAACACCTCGCATGATAAATACTA 58.281 34.615 0.00 0.00 0.00 1.82
2446 2517 7.650504 TGTAACACCTCGCATGATAAATACTAC 59.349 37.037 0.00 0.00 0.00 2.73
2447 2518 6.406692 ACACCTCGCATGATAAATACTACT 57.593 37.500 0.00 0.00 0.00 2.57
2448 2519 6.448006 ACACCTCGCATGATAAATACTACTC 58.552 40.000 0.00 0.00 0.00 2.59
2449 2520 6.265649 ACACCTCGCATGATAAATACTACTCT 59.734 38.462 0.00 0.00 0.00 3.24
2450 2521 6.804295 CACCTCGCATGATAAATACTACTCTC 59.196 42.308 0.00 0.00 0.00 3.20
2451 2522 6.717540 ACCTCGCATGATAAATACTACTCTCT 59.282 38.462 0.00 0.00 0.00 3.10
2452 2523 7.094549 ACCTCGCATGATAAATACTACTCTCTC 60.095 40.741 0.00 0.00 0.00 3.20
2453 2524 7.147143 TCGCATGATAAATACTACTCTCTCC 57.853 40.000 0.00 0.00 0.00 3.71
2454 2525 6.024664 CGCATGATAAATACTACTCTCTCCG 58.975 44.000 0.00 0.00 0.00 4.63
2455 2526 6.348622 CGCATGATAAATACTACTCTCTCCGT 60.349 42.308 0.00 0.00 0.00 4.69
2456 2527 7.371936 GCATGATAAATACTACTCTCTCCGTT 58.628 38.462 0.00 0.00 0.00 4.44
2457 2528 7.327275 GCATGATAAATACTACTCTCTCCGTTG 59.673 40.741 0.00 0.00 0.00 4.10
2458 2529 7.876936 TGATAAATACTACTCTCTCCGTTGT 57.123 36.000 0.00 0.00 0.00 3.32
2459 2530 8.969260 TGATAAATACTACTCTCTCCGTTGTA 57.031 34.615 0.00 0.00 0.00 2.41
2460 2531 9.570468 TGATAAATACTACTCTCTCCGTTGTAT 57.430 33.333 0.00 0.00 35.74 2.29
2495 2566 9.921637 TCATATACATTTTTGGAAAGTCAAACC 57.078 29.630 0.00 0.00 36.49 3.27
2496 2567 9.927668 CATATACATTTTTGGAAAGTCAAACCT 57.072 29.630 0.00 0.00 36.49 3.50
2498 2569 6.293004 ACATTTTTGGAAAGTCAAACCTCA 57.707 33.333 0.00 0.00 36.49 3.86
2499 2570 6.106003 ACATTTTTGGAAAGTCAAACCTCAC 58.894 36.000 0.00 0.00 36.49 3.51
2500 2571 5.730296 TTTTTGGAAAGTCAAACCTCACA 57.270 34.783 0.00 0.00 36.49 3.58
2501 2572 5.930837 TTTTGGAAAGTCAAACCTCACAT 57.069 34.783 0.00 0.00 36.49 3.21
2502 2573 7.411486 TTTTTGGAAAGTCAAACCTCACATA 57.589 32.000 0.00 0.00 36.49 2.29
2503 2574 6.385649 TTTGGAAAGTCAAACCTCACATAC 57.614 37.500 0.00 0.00 32.39 2.39
2504 2575 5.304686 TGGAAAGTCAAACCTCACATACT 57.695 39.130 0.00 0.00 0.00 2.12
2505 2576 5.690865 TGGAAAGTCAAACCTCACATACTT 58.309 37.500 0.00 0.00 0.00 2.24
2506 2577 6.126409 TGGAAAGTCAAACCTCACATACTTT 58.874 36.000 0.00 0.00 39.24 2.66
2507 2578 6.039270 TGGAAAGTCAAACCTCACATACTTTG 59.961 38.462 0.00 0.00 37.31 2.77
2508 2579 6.262273 GGAAAGTCAAACCTCACATACTTTGA 59.738 38.462 0.00 0.00 37.31 2.69
2509 2580 7.040409 GGAAAGTCAAACCTCACATACTTTGAT 60.040 37.037 0.00 0.00 37.31 2.57
2510 2581 7.440523 AAGTCAAACCTCACATACTTTGATC 57.559 36.000 0.00 0.00 35.61 2.92
2511 2582 6.533730 AGTCAAACCTCACATACTTTGATCA 58.466 36.000 0.00 0.00 35.61 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
115 116 6.127281 TGACTAACCATATAGAACGAGCCAAA 60.127 38.462 0.00 0.00 0.00 3.28
545 556 0.385390 CACACAGCCAACAAAGTCCC 59.615 55.000 0.00 0.00 0.00 4.46
591 607 9.409312 GGCGCTTTATTACTTAAAAGGTTTAAA 57.591 29.630 7.64 0.00 34.07 1.52
631 656 2.291930 ACTGGGACCAAAACCAACTTGA 60.292 45.455 0.00 0.00 36.09 3.02
632 657 2.107366 ACTGGGACCAAAACCAACTTG 58.893 47.619 0.00 0.00 36.09 3.16
633 658 2.543037 ACTGGGACCAAAACCAACTT 57.457 45.000 0.00 0.00 36.09 2.66
634 659 3.673543 TTACTGGGACCAAAACCAACT 57.326 42.857 0.00 0.00 36.09 3.16
635 660 3.702548 AGTTTACTGGGACCAAAACCAAC 59.297 43.478 12.64 3.81 36.09 3.77
636 661 3.702045 CAGTTTACTGGGACCAAAACCAA 59.298 43.478 12.64 0.00 40.20 3.67
637 662 3.292460 CAGTTTACTGGGACCAAAACCA 58.708 45.455 12.64 0.00 40.20 3.67
638 663 2.035449 GCAGTTTACTGGGACCAAAACC 59.965 50.000 11.55 0.00 43.94 3.27
639 664 3.364889 GCAGTTTACTGGGACCAAAAC 57.635 47.619 11.55 9.56 43.94 2.43
648 673 1.078759 CTCGCCTCGCAGTTTACTGG 61.079 60.000 11.55 2.71 43.94 4.00
649 674 0.109272 TCTCGCCTCGCAGTTTACTG 60.109 55.000 5.52 5.52 46.40 2.74
650 675 0.171455 CTCTCGCCTCGCAGTTTACT 59.829 55.000 0.00 0.00 0.00 2.24
651 676 0.109226 ACTCTCGCCTCGCAGTTTAC 60.109 55.000 0.00 0.00 0.00 2.01
652 677 0.109272 CACTCTCGCCTCGCAGTTTA 60.109 55.000 0.00 0.00 0.00 2.01
653 678 1.373497 CACTCTCGCCTCGCAGTTT 60.373 57.895 0.00 0.00 0.00 2.66
654 679 2.206515 CTCACTCTCGCCTCGCAGTT 62.207 60.000 0.00 0.00 0.00 3.16
655 680 2.673341 TCACTCTCGCCTCGCAGT 60.673 61.111 0.00 0.00 0.00 4.40
656 681 2.101965 CTCACTCTCGCCTCGCAG 59.898 66.667 0.00 0.00 0.00 5.18
657 682 2.673341 ACTCACTCTCGCCTCGCA 60.673 61.111 0.00 0.00 0.00 5.10
658 683 2.202544 CACTCACTCTCGCCTCGC 60.203 66.667 0.00 0.00 0.00 5.03
659 684 1.427419 CTCACTCACTCTCGCCTCG 59.573 63.158 0.00 0.00 0.00 4.63
671 696 0.107945 GACAGTGGCATCCCTCACTC 60.108 60.000 0.00 0.00 41.71 3.51
707 732 0.671163 CCGGTTTTCGATTGGACGGA 60.671 55.000 9.55 0.00 42.19 4.69
741 766 2.980233 GCAAGTGAGCCCAGCGTT 60.980 61.111 0.00 0.00 0.00 4.84
759 784 0.467804 GGGAGCAGCTTTCTAGAGGG 59.532 60.000 0.00 0.00 0.00 4.30
821 852 4.877773 AGAGAGAGAGAGAGAGAGAGAGT 58.122 47.826 0.00 0.00 0.00 3.24
824 855 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
826 857 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
830 861 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
831 862 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
832 863 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
833 864 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
834 865 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
835 866 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
836 867 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
837 868 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
838 869 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
839 870 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
840 871 4.280677 GGAGAGAGAGAGAGAGAGAGAGAG 59.719 54.167 0.00 0.00 0.00 3.20
841 872 4.219115 GGAGAGAGAGAGAGAGAGAGAGA 58.781 52.174 0.00 0.00 0.00 3.10
842 873 3.005261 CGGAGAGAGAGAGAGAGAGAGAG 59.995 56.522 0.00 0.00 0.00 3.20
843 874 2.959030 CGGAGAGAGAGAGAGAGAGAGA 59.041 54.545 0.00 0.00 0.00 3.10
844 875 2.546795 GCGGAGAGAGAGAGAGAGAGAG 60.547 59.091 0.00 0.00 0.00 3.20
845 876 1.412710 GCGGAGAGAGAGAGAGAGAGA 59.587 57.143 0.00 0.00 0.00 3.10
846 877 1.138859 TGCGGAGAGAGAGAGAGAGAG 59.861 57.143 0.00 0.00 0.00 3.20
847 878 1.199615 TGCGGAGAGAGAGAGAGAGA 58.800 55.000 0.00 0.00 0.00 3.10
848 879 1.875514 CATGCGGAGAGAGAGAGAGAG 59.124 57.143 0.00 0.00 0.00 3.20
849 880 1.488393 TCATGCGGAGAGAGAGAGAGA 59.512 52.381 0.00 0.00 0.00 3.10
850 881 1.603802 GTCATGCGGAGAGAGAGAGAG 59.396 57.143 0.00 0.00 0.00 3.20
851 882 1.211703 AGTCATGCGGAGAGAGAGAGA 59.788 52.381 0.00 0.00 0.00 3.10
852 883 1.334556 CAGTCATGCGGAGAGAGAGAG 59.665 57.143 0.00 0.00 0.00 3.20
853 884 1.387539 CAGTCATGCGGAGAGAGAGA 58.612 55.000 0.00 0.00 0.00 3.10
933 964 0.818445 AGACGACGACAGTGGTGAGT 60.818 55.000 0.00 0.00 39.44 3.41
1018 1051 2.370189 CTCTCTCTCTCTCTCTCTCCCC 59.630 59.091 0.00 0.00 0.00 4.81
1020 1053 5.129485 TCTTTCTCTCTCTCTCTCTCTCTCC 59.871 48.000 0.00 0.00 0.00 3.71
1021 1054 6.097554 TCTCTTTCTCTCTCTCTCTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
1022 1055 5.960811 TCTCTTTCTCTCTCTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
1023 1056 6.097554 TCTCTCTTTCTCTCTCTCTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
1024 1057 5.960811 TCTCTCTTTCTCTCTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
1025 1058 6.097554 TCTCTCTCTTTCTCTCTCTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
1026 1059 5.960811 TCTCTCTCTTTCTCTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
1027 1060 6.097554 TCTCTCTCTCTTTCTCTCTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
1028 1061 5.960811 TCTCTCTCTCTTTCTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
1029 1062 6.097554 TCTCTCTCTCTCTTTCTCTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
1030 1063 5.960811 TCTCTCTCTCTCTTTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
1031 1064 6.097554 TCTCTCTCTCTCTCTTTCTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
1032 1065 5.960811 TCTCTCTCTCTCTCTTTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
1033 1066 6.097554 TCTCTCTCTCTCTCTCTTTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
1034 1067 5.960811 TCTCTCTCTCTCTCTCTTTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
1035 1068 6.097554 TCTCTCTCTCTCTCTCTCTTTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
1036 1069 5.960811 TCTCTCTCTCTCTCTCTCTTTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
1037 1070 6.097554 TCTCTCTCTCTCTCTCTCTCTTTCTC 59.902 46.154 0.00 0.00 0.00 2.87
1038 1071 5.960811 TCTCTCTCTCTCTCTCTCTCTTTCT 59.039 44.000 0.00 0.00 0.00 2.52
1039 1072 6.227298 TCTCTCTCTCTCTCTCTCTCTTTC 57.773 45.833 0.00 0.00 0.00 2.62
1040 1073 6.627087 TTCTCTCTCTCTCTCTCTCTCTTT 57.373 41.667 0.00 0.00 0.00 2.52
1041 1074 6.013379 TGTTTCTCTCTCTCTCTCTCTCTCTT 60.013 42.308 0.00 0.00 0.00 2.85
1042 1075 5.485353 TGTTTCTCTCTCTCTCTCTCTCTCT 59.515 44.000 0.00 0.00 0.00 3.10
1043 1076 5.734720 TGTTTCTCTCTCTCTCTCTCTCTC 58.265 45.833 0.00 0.00 0.00 3.20
1044 1077 5.338708 CCTGTTTCTCTCTCTCTCTCTCTCT 60.339 48.000 0.00 0.00 0.00 3.10
1045 1078 4.878397 CCTGTTTCTCTCTCTCTCTCTCTC 59.122 50.000 0.00 0.00 0.00 3.20
1046 1079 4.324563 CCCTGTTTCTCTCTCTCTCTCTCT 60.325 50.000 0.00 0.00 0.00 3.10
1047 1080 3.947834 CCCTGTTTCTCTCTCTCTCTCTC 59.052 52.174 0.00 0.00 0.00 3.20
1048 1081 3.591527 TCCCTGTTTCTCTCTCTCTCTCT 59.408 47.826 0.00 0.00 0.00 3.10
1049 1082 3.947834 CTCCCTGTTTCTCTCTCTCTCTC 59.052 52.174 0.00 0.00 0.00 3.20
1050 1083 3.309121 CCTCCCTGTTTCTCTCTCTCTCT 60.309 52.174 0.00 0.00 0.00 3.10
1061 1094 2.269241 CGGCTCCCTCCCTGTTTC 59.731 66.667 0.00 0.00 0.00 2.78
1167 1200 0.030297 ATGCAGAGTCAGGGGAGGAT 60.030 55.000 0.00 0.00 0.00 3.24
1171 1204 1.607801 CGTGATGCAGAGTCAGGGGA 61.608 60.000 0.00 0.00 0.00 4.81
1356 1401 2.906897 AGGTTGTGCAGCGGGTTG 60.907 61.111 0.00 0.00 0.00 3.77
1432 1477 4.460263 AGAAAATTACACTGCACCAGTCA 58.540 39.130 0.00 0.00 43.43 3.41
1433 1478 5.239525 AGAAGAAAATTACACTGCACCAGTC 59.760 40.000 0.00 0.00 43.43 3.51
1443 1488 8.715088 ACCGTATGTACAAGAAGAAAATTACAC 58.285 33.333 0.00 0.00 0.00 2.90
1482 1527 9.893634 ATCAATCAATGCAAAATCAATAAGGAA 57.106 25.926 0.00 0.00 0.00 3.36
1508 1553 2.906389 AGACACAGAGACAGCCCATTTA 59.094 45.455 0.00 0.00 0.00 1.40
1531 1576 7.920682 GGATATATGACCAAATTGAACACCAAC 59.079 37.037 0.00 0.00 37.63 3.77
1562 1607 6.183361 ACCTTTTGTCAGGCTACTGTAAGTTA 60.183 38.462 0.00 0.00 40.72 2.24
1563 1608 5.397559 ACCTTTTGTCAGGCTACTGTAAGTT 60.398 40.000 0.00 0.00 40.72 2.66
1564 1609 4.102681 ACCTTTTGTCAGGCTACTGTAAGT 59.897 41.667 0.00 0.00 44.44 2.24
1565 1610 4.642429 ACCTTTTGTCAGGCTACTGTAAG 58.358 43.478 0.00 0.00 45.14 2.34
1570 1615 3.577805 ACAACCTTTTGTCAGGCTACT 57.422 42.857 0.00 0.00 42.67 2.57
1580 1628 3.447229 AGTGGGTTCTTGACAACCTTTTG 59.553 43.478 2.51 0.00 44.80 2.44
1660 1716 9.784531 TGGTAGTAAGTGAGTATATGGTAGTAC 57.215 37.037 0.00 0.00 0.00 2.73
1667 1723 9.314321 CAGGTTTTGGTAGTAAGTGAGTATATG 57.686 37.037 0.00 0.00 0.00 1.78
1668 1724 8.483758 CCAGGTTTTGGTAGTAAGTGAGTATAT 58.516 37.037 0.00 0.00 42.41 0.86
1670 1726 6.708285 CCAGGTTTTGGTAGTAAGTGAGTAT 58.292 40.000 0.00 0.00 42.41 2.12
1672 1728 4.969484 CCAGGTTTTGGTAGTAAGTGAGT 58.031 43.478 0.00 0.00 42.41 3.41
1690 1746 4.497473 TCTTGCAACGAATAAAACCAGG 57.503 40.909 0.00 0.00 0.00 4.45
1691 1747 5.625311 GTCTTCTTGCAACGAATAAAACCAG 59.375 40.000 0.00 0.00 0.00 4.00
1709 1765 2.164338 GAGTCTTCAGGACCGTCTTCT 58.836 52.381 0.00 0.00 45.54 2.85
1749 1805 2.438021 AGTGGCTAAACTGAGTGAACCA 59.562 45.455 0.00 0.00 0.00 3.67
1750 1806 3.067833 GAGTGGCTAAACTGAGTGAACC 58.932 50.000 0.00 0.00 0.00 3.62
1760 1816 1.804748 CCCTTGAACGAGTGGCTAAAC 59.195 52.381 0.00 0.00 0.00 2.01
1766 1822 1.812571 CAAATCCCCTTGAACGAGTGG 59.187 52.381 0.00 0.00 0.00 4.00
1786 1842 0.373716 CAGTTACGATGGGAAAGCGC 59.626 55.000 0.00 0.00 42.90 5.92
1798 1854 3.186409 CCAACATGGACAGTTCAGTTACG 59.814 47.826 0.00 0.00 40.96 3.18
1812 1868 2.690786 CAATTCTTGGCACCAACATGG 58.309 47.619 0.00 0.00 45.02 3.66
1824 1891 2.165167 TGGAGGAAGCTGCAATTCTTG 58.835 47.619 1.02 0.00 0.00 3.02
1829 1896 1.272872 ACCATTGGAGGAAGCTGCAAT 60.273 47.619 10.37 0.00 44.29 3.56
1841 1908 3.791953 TTTCCCTCGTTTACCATTGGA 57.208 42.857 10.37 0.00 0.00 3.53
1842 1909 4.321675 CCTTTTTCCCTCGTTTACCATTGG 60.322 45.833 0.00 0.00 0.00 3.16
1843 1910 4.521256 TCCTTTTTCCCTCGTTTACCATTG 59.479 41.667 0.00 0.00 0.00 2.82
1844 1911 4.732065 TCCTTTTTCCCTCGTTTACCATT 58.268 39.130 0.00 0.00 0.00 3.16
1885 1952 4.093514 CAAAGTGACTTTATGCTGCGATG 58.906 43.478 10.63 0.00 31.96 3.84
1887 1954 3.398406 TCAAAGTGACTTTATGCTGCGA 58.602 40.909 10.63 0.00 31.96 5.10
1894 1961 9.672673 AGTTGCACTATATCAAAGTGACTTTAT 57.327 29.630 10.63 3.78 45.89 1.40
1895 1962 9.151471 GAGTTGCACTATATCAAAGTGACTTTA 57.849 33.333 10.63 0.00 45.89 1.85
1923 1994 2.203983 TTGCCAGGCTCAGGAGGA 60.204 61.111 14.15 0.00 0.00 3.71
1927 1998 2.360852 CAGGTTGCCAGGCTCAGG 60.361 66.667 14.15 0.00 0.00 3.86
1931 2002 0.407139 ATTCTTCAGGTTGCCAGGCT 59.593 50.000 14.15 0.00 0.00 4.58
1932 2003 1.260544 AATTCTTCAGGTTGCCAGGC 58.739 50.000 3.66 3.66 0.00 4.85
1933 2004 3.321682 TGAAAATTCTTCAGGTTGCCAGG 59.678 43.478 0.00 0.00 0.00 4.45
1934 2005 4.589216 TGAAAATTCTTCAGGTTGCCAG 57.411 40.909 0.00 0.00 0.00 4.85
1935 2006 4.442753 GGTTGAAAATTCTTCAGGTTGCCA 60.443 41.667 0.00 0.00 0.00 4.92
1936 2007 4.058124 GGTTGAAAATTCTTCAGGTTGCC 58.942 43.478 0.00 0.00 0.00 4.52
1937 2008 3.735746 CGGTTGAAAATTCTTCAGGTTGC 59.264 43.478 0.00 0.00 0.00 4.17
1938 2009 4.202111 ACCGGTTGAAAATTCTTCAGGTTG 60.202 41.667 0.00 0.00 30.75 3.77
1950 2021 6.494146 ACTCCCAATATAAAACCGGTTGAAAA 59.506 34.615 23.08 7.91 0.00 2.29
1974 2045 6.055588 AGTCAACTGAGCTATAGAGAGAGAC 58.944 44.000 3.21 8.85 0.00 3.36
1976 2047 6.942532 AAGTCAACTGAGCTATAGAGAGAG 57.057 41.667 3.21 0.00 0.00 3.20
1977 2048 7.797062 TCTAAGTCAACTGAGCTATAGAGAGA 58.203 38.462 3.21 0.00 0.00 3.10
1978 2049 7.931407 TCTCTAAGTCAACTGAGCTATAGAGAG 59.069 40.741 3.21 2.25 39.23 3.20
1979 2050 7.797062 TCTCTAAGTCAACTGAGCTATAGAGA 58.203 38.462 3.21 10.72 40.86 3.10
1980 2051 8.621532 ATCTCTAAGTCAACTGAGCTATAGAG 57.378 38.462 3.21 7.53 37.52 2.43
1995 2066 9.862371 TGACTGAGAAATAACAATCTCTAAGTC 57.138 33.333 12.64 12.64 41.48 3.01
2027 2098 2.939103 CAGTACTGATTGGGCTGCTAAC 59.061 50.000 18.45 0.00 0.00 2.34
2028 2099 2.571653 ACAGTACTGATTGGGCTGCTAA 59.428 45.455 29.30 0.00 0.00 3.09
2030 2101 0.987294 ACAGTACTGATTGGGCTGCT 59.013 50.000 29.30 0.00 0.00 4.24
2031 2102 2.691409 TACAGTACTGATTGGGCTGC 57.309 50.000 29.30 0.00 0.00 5.25
2032 2103 4.679373 AGATACAGTACTGATTGGGCTG 57.321 45.455 29.30 0.31 0.00 4.85
2033 2104 4.965532 AGAAGATACAGTACTGATTGGGCT 59.034 41.667 29.30 15.19 0.00 5.19
2034 2105 5.283457 AGAAGATACAGTACTGATTGGGC 57.717 43.478 29.30 13.33 0.00 5.36
2035 2106 6.926272 GCTAAGAAGATACAGTACTGATTGGG 59.074 42.308 29.30 1.64 0.00 4.12
2036 2107 6.926272 GGCTAAGAAGATACAGTACTGATTGG 59.074 42.308 29.30 13.11 0.00 3.16
2037 2108 7.436673 GTGGCTAAGAAGATACAGTACTGATTG 59.563 40.741 29.30 3.91 0.00 2.67
2038 2109 7.124298 TGTGGCTAAGAAGATACAGTACTGATT 59.876 37.037 29.30 16.50 0.00 2.57
2039 2110 6.607600 TGTGGCTAAGAAGATACAGTACTGAT 59.392 38.462 29.30 17.08 0.00 2.90
2040 2111 5.949952 TGTGGCTAAGAAGATACAGTACTGA 59.050 40.000 29.30 13.09 0.00 3.41
2041 2112 6.208988 TGTGGCTAAGAAGATACAGTACTG 57.791 41.667 21.44 21.44 0.00 2.74
2042 2113 7.425224 AATGTGGCTAAGAAGATACAGTACT 57.575 36.000 0.00 0.00 0.00 2.73
2043 2114 7.764443 TCAAATGTGGCTAAGAAGATACAGTAC 59.236 37.037 0.00 0.00 0.00 2.73
2044 2115 7.847096 TCAAATGTGGCTAAGAAGATACAGTA 58.153 34.615 0.00 0.00 0.00 2.74
2045 2116 6.711277 TCAAATGTGGCTAAGAAGATACAGT 58.289 36.000 0.00 0.00 0.00 3.55
2046 2117 6.238320 GCTCAAATGTGGCTAAGAAGATACAG 60.238 42.308 0.00 0.00 0.00 2.74
2047 2118 5.586243 GCTCAAATGTGGCTAAGAAGATACA 59.414 40.000 0.00 0.00 0.00 2.29
2048 2119 5.819901 AGCTCAAATGTGGCTAAGAAGATAC 59.180 40.000 0.00 0.00 31.80 2.24
2049 2120 5.994250 AGCTCAAATGTGGCTAAGAAGATA 58.006 37.500 0.00 0.00 31.80 1.98
2050 2121 4.853007 AGCTCAAATGTGGCTAAGAAGAT 58.147 39.130 0.00 0.00 31.80 2.40
2051 2122 4.292186 AGCTCAAATGTGGCTAAGAAGA 57.708 40.909 0.00 0.00 31.80 2.87
2052 2123 4.730657 CAAGCTCAAATGTGGCTAAGAAG 58.269 43.478 0.00 0.00 32.84 2.85
2053 2124 3.057315 GCAAGCTCAAATGTGGCTAAGAA 60.057 43.478 0.00 0.00 32.84 2.52
2054 2125 2.489329 GCAAGCTCAAATGTGGCTAAGA 59.511 45.455 0.00 0.00 32.84 2.10
2055 2126 2.229543 TGCAAGCTCAAATGTGGCTAAG 59.770 45.455 0.00 0.00 32.84 2.18
2056 2127 2.229543 CTGCAAGCTCAAATGTGGCTAA 59.770 45.455 0.00 0.00 32.84 3.09
2057 2128 1.814394 CTGCAAGCTCAAATGTGGCTA 59.186 47.619 0.00 0.00 32.84 3.93
2058 2129 0.601558 CTGCAAGCTCAAATGTGGCT 59.398 50.000 0.00 0.00 34.07 4.75
2059 2130 0.389426 CCTGCAAGCTCAAATGTGGC 60.389 55.000 0.00 0.00 0.00 5.01
2060 2131 1.250328 TCCTGCAAGCTCAAATGTGG 58.750 50.000 0.00 0.00 0.00 4.17
2061 2132 3.250744 CATTCCTGCAAGCTCAAATGTG 58.749 45.455 0.00 0.00 0.00 3.21
2062 2133 3.587797 CATTCCTGCAAGCTCAAATGT 57.412 42.857 0.00 0.00 0.00 2.71
2075 2146 5.840243 TCAATCTAAACATGGCATTCCTG 57.160 39.130 0.00 0.00 0.00 3.86
2076 2147 5.163622 CGTTCAATCTAAACATGGCATTCCT 60.164 40.000 0.00 0.00 0.00 3.36
2077 2148 5.036737 CGTTCAATCTAAACATGGCATTCC 58.963 41.667 0.00 0.00 0.00 3.01
2078 2149 5.036737 CCGTTCAATCTAAACATGGCATTC 58.963 41.667 0.00 0.00 0.00 2.67
2079 2150 4.462483 ACCGTTCAATCTAAACATGGCATT 59.538 37.500 0.00 0.00 0.00 3.56
2080 2151 4.016444 ACCGTTCAATCTAAACATGGCAT 58.984 39.130 0.00 0.00 0.00 4.40
2081 2152 3.417101 ACCGTTCAATCTAAACATGGCA 58.583 40.909 0.00 0.00 0.00 4.92
2082 2153 3.689649 AGACCGTTCAATCTAAACATGGC 59.310 43.478 0.00 0.00 0.00 4.40
2083 2154 5.880054 AAGACCGTTCAATCTAAACATGG 57.120 39.130 0.00 0.00 0.00 3.66
2084 2155 6.313905 AGCTAAGACCGTTCAATCTAAACATG 59.686 38.462 0.00 0.00 0.00 3.21
2085 2156 6.313905 CAGCTAAGACCGTTCAATCTAAACAT 59.686 38.462 0.00 0.00 0.00 2.71
2086 2157 5.637810 CAGCTAAGACCGTTCAATCTAAACA 59.362 40.000 0.00 0.00 0.00 2.83
2087 2158 5.638234 ACAGCTAAGACCGTTCAATCTAAAC 59.362 40.000 0.00 0.00 0.00 2.01
2088 2159 5.637810 CACAGCTAAGACCGTTCAATCTAAA 59.362 40.000 0.00 0.00 0.00 1.85
2089 2160 5.047590 TCACAGCTAAGACCGTTCAATCTAA 60.048 40.000 0.00 0.00 0.00 2.10
2090 2161 4.461431 TCACAGCTAAGACCGTTCAATCTA 59.539 41.667 0.00 0.00 0.00 1.98
2091 2162 3.258372 TCACAGCTAAGACCGTTCAATCT 59.742 43.478 0.00 0.00 0.00 2.40
2092 2163 3.368236 GTCACAGCTAAGACCGTTCAATC 59.632 47.826 6.48 0.00 0.00 2.67
2093 2164 3.006967 AGTCACAGCTAAGACCGTTCAAT 59.993 43.478 12.61 0.00 35.38 2.57
2094 2165 2.364324 AGTCACAGCTAAGACCGTTCAA 59.636 45.455 12.61 0.00 35.38 2.69
2095 2166 1.961394 AGTCACAGCTAAGACCGTTCA 59.039 47.619 12.61 0.00 35.38 3.18
2096 2167 2.726832 AGTCACAGCTAAGACCGTTC 57.273 50.000 12.61 0.00 35.38 3.95
2097 2168 2.548067 CCAAGTCACAGCTAAGACCGTT 60.548 50.000 12.61 1.54 35.38 4.44
2098 2169 1.000955 CCAAGTCACAGCTAAGACCGT 59.999 52.381 12.61 1.20 35.38 4.83
2099 2170 1.714794 CCAAGTCACAGCTAAGACCG 58.285 55.000 12.61 6.10 35.38 4.79
2100 2171 1.443802 GCCAAGTCACAGCTAAGACC 58.556 55.000 12.61 0.00 35.38 3.85
2101 2172 1.071605 CGCCAAGTCACAGCTAAGAC 58.928 55.000 9.14 9.14 35.02 3.01
2102 2173 0.966179 TCGCCAAGTCACAGCTAAGA 59.034 50.000 0.00 0.00 0.00 2.10
2103 2174 2.015736 ATCGCCAAGTCACAGCTAAG 57.984 50.000 0.00 0.00 0.00 2.18
2104 2175 2.496070 ACTATCGCCAAGTCACAGCTAA 59.504 45.455 0.00 0.00 0.00 3.09
2105 2176 2.100197 ACTATCGCCAAGTCACAGCTA 58.900 47.619 0.00 0.00 0.00 3.32
2106 2177 0.898320 ACTATCGCCAAGTCACAGCT 59.102 50.000 0.00 0.00 0.00 4.24
2107 2178 1.726853 AACTATCGCCAAGTCACAGC 58.273 50.000 0.00 0.00 0.00 4.40
2108 2179 5.812642 AGAAATAACTATCGCCAAGTCACAG 59.187 40.000 0.00 0.00 0.00 3.66
2109 2180 5.730550 AGAAATAACTATCGCCAAGTCACA 58.269 37.500 0.00 0.00 0.00 3.58
2110 2181 5.810587 TGAGAAATAACTATCGCCAAGTCAC 59.189 40.000 0.00 0.00 0.00 3.67
2111 2182 5.972935 TGAGAAATAACTATCGCCAAGTCA 58.027 37.500 0.00 0.00 0.00 3.41
2112 2183 6.043411 ACTGAGAAATAACTATCGCCAAGTC 58.957 40.000 0.00 0.00 0.00 3.01
2113 2184 5.978814 ACTGAGAAATAACTATCGCCAAGT 58.021 37.500 0.00 0.00 0.00 3.16
2114 2185 6.042777 TGACTGAGAAATAACTATCGCCAAG 58.957 40.000 0.00 0.00 0.00 3.61
2115 2186 5.972935 TGACTGAGAAATAACTATCGCCAA 58.027 37.500 0.00 0.00 0.00 4.52
2116 2187 5.592104 TGACTGAGAAATAACTATCGCCA 57.408 39.130 0.00 0.00 0.00 5.69
2117 2188 8.029522 TCATATGACTGAGAAATAACTATCGCC 58.970 37.037 0.00 0.00 0.00 5.54
2118 2189 8.972262 TCATATGACTGAGAAATAACTATCGC 57.028 34.615 0.00 0.00 0.00 4.58
2131 2202 9.903682 AATTTTGTTGTTTCTCATATGACTGAG 57.096 29.630 0.00 0.00 43.33 3.35
2132 2203 9.681692 CAATTTTGTTGTTTCTCATATGACTGA 57.318 29.630 0.00 0.00 0.00 3.41
2133 2204 9.467258 ACAATTTTGTTGTTTCTCATATGACTG 57.533 29.630 0.00 0.00 38.47 3.51
2169 2240 9.998106 GCACTTATTTTGATATAGAGGGAGTAA 57.002 33.333 0.00 0.00 0.00 2.24
2170 2241 8.594550 GGCACTTATTTTGATATAGAGGGAGTA 58.405 37.037 0.00 0.00 0.00 2.59
2171 2242 7.454225 GGCACTTATTTTGATATAGAGGGAGT 58.546 38.462 0.00 0.00 0.00 3.85
2172 2243 6.591834 CGGCACTTATTTTGATATAGAGGGAG 59.408 42.308 0.00 0.00 0.00 4.30
2173 2244 6.464222 CGGCACTTATTTTGATATAGAGGGA 58.536 40.000 0.00 0.00 0.00 4.20
2174 2245 5.122396 GCGGCACTTATTTTGATATAGAGGG 59.878 44.000 0.00 0.00 0.00 4.30
2175 2246 5.122396 GGCGGCACTTATTTTGATATAGAGG 59.878 44.000 3.07 0.00 0.00 3.69
2176 2247 5.163953 CGGCGGCACTTATTTTGATATAGAG 60.164 44.000 10.53 0.00 0.00 2.43
2177 2248 4.688879 CGGCGGCACTTATTTTGATATAGA 59.311 41.667 10.53 0.00 0.00 1.98
2178 2249 4.688879 TCGGCGGCACTTATTTTGATATAG 59.311 41.667 10.53 0.00 0.00 1.31
2179 2250 4.449743 GTCGGCGGCACTTATTTTGATATA 59.550 41.667 6.63 0.00 0.00 0.86
2180 2251 3.250040 GTCGGCGGCACTTATTTTGATAT 59.750 43.478 6.63 0.00 0.00 1.63
2181 2252 2.610374 GTCGGCGGCACTTATTTTGATA 59.390 45.455 6.63 0.00 0.00 2.15
2182 2253 1.400494 GTCGGCGGCACTTATTTTGAT 59.600 47.619 6.63 0.00 0.00 2.57
2183 2254 0.800012 GTCGGCGGCACTTATTTTGA 59.200 50.000 6.63 0.00 0.00 2.69
2184 2255 0.802494 AGTCGGCGGCACTTATTTTG 59.198 50.000 16.23 0.00 0.00 2.44
2185 2256 1.530323 AAGTCGGCGGCACTTATTTT 58.470 45.000 16.23 0.00 32.08 1.82
2186 2257 2.277084 CTAAGTCGGCGGCACTTATTT 58.723 47.619 23.71 0.00 36.09 1.40
2187 2258 1.206371 ACTAAGTCGGCGGCACTTATT 59.794 47.619 23.71 18.75 36.09 1.40
2188 2259 0.822164 ACTAAGTCGGCGGCACTTAT 59.178 50.000 23.71 15.68 36.09 1.73
2189 2260 1.133025 GTACTAAGTCGGCGGCACTTA 59.867 52.381 16.23 22.76 35.63 2.24
2190 2261 0.108945 GTACTAAGTCGGCGGCACTT 60.109 55.000 16.23 22.91 37.80 3.16
2191 2262 1.246056 TGTACTAAGTCGGCGGCACT 61.246 55.000 16.23 4.53 0.00 4.40
2192 2263 0.388907 TTGTACTAAGTCGGCGGCAC 60.389 55.000 16.23 2.54 0.00 5.01
2193 2264 0.388907 GTTGTACTAAGTCGGCGGCA 60.389 55.000 16.23 0.00 0.00 5.69
2194 2265 0.108945 AGTTGTACTAAGTCGGCGGC 60.109 55.000 1.71 1.71 0.00 6.53
2195 2266 2.358939 AAGTTGTACTAAGTCGGCGG 57.641 50.000 7.21 0.00 0.00 6.13
2196 2267 3.054878 ACAAAGTTGTACTAAGTCGGCG 58.945 45.455 0.00 0.00 40.16 6.46
2215 2286 8.550710 ACAACTTTGTACAACAACTTAGTACA 57.449 30.769 8.07 0.00 44.38 2.90
2230 2301 6.924612 TGTCGCTGATTTAGTACAACTTTGTA 59.075 34.615 0.00 0.00 42.35 2.41
2231 2302 5.756347 TGTCGCTGATTTAGTACAACTTTGT 59.244 36.000 0.00 0.00 44.86 2.83
2232 2303 6.071463 GTGTCGCTGATTTAGTACAACTTTG 58.929 40.000 0.00 0.00 0.00 2.77
2233 2304 5.989777 AGTGTCGCTGATTTAGTACAACTTT 59.010 36.000 0.00 0.00 0.00 2.66
2234 2305 5.539048 AGTGTCGCTGATTTAGTACAACTT 58.461 37.500 0.00 0.00 0.00 2.66
2235 2306 5.135508 AGTGTCGCTGATTTAGTACAACT 57.864 39.130 0.00 0.00 0.00 3.16
2236 2307 5.840940 AAGTGTCGCTGATTTAGTACAAC 57.159 39.130 0.00 0.00 0.00 3.32
2237 2308 8.542497 AAATAAGTGTCGCTGATTTAGTACAA 57.458 30.769 6.91 0.00 36.68 2.41
2238 2309 8.542497 AAAATAAGTGTCGCTGATTTAGTACA 57.458 30.769 8.84 0.00 37.29 2.90
2240 2311 9.865321 ACTAAAATAAGTGTCGCTGATTTAGTA 57.135 29.630 19.56 7.87 37.29 1.82
2241 2312 8.773404 ACTAAAATAAGTGTCGCTGATTTAGT 57.227 30.769 17.34 17.34 37.29 2.24
2243 2314 8.800972 CGTACTAAAATAAGTGTCGCTGATTTA 58.199 33.333 8.84 4.46 37.29 1.40
2244 2315 7.543172 TCGTACTAAAATAAGTGTCGCTGATTT 59.457 33.333 3.21 3.21 39.41 2.17
2245 2316 7.031372 TCGTACTAAAATAAGTGTCGCTGATT 58.969 34.615 0.00 0.00 32.36 2.57
2246 2317 6.558009 TCGTACTAAAATAAGTGTCGCTGAT 58.442 36.000 0.00 0.00 32.36 2.90
2247 2318 5.941733 TCGTACTAAAATAAGTGTCGCTGA 58.058 37.500 0.00 0.00 32.36 4.26
2248 2319 6.237490 CCTTCGTACTAAAATAAGTGTCGCTG 60.237 42.308 0.00 0.00 32.36 5.18
2249 2320 5.803967 CCTTCGTACTAAAATAAGTGTCGCT 59.196 40.000 0.00 0.00 32.36 4.93
2250 2321 5.005107 CCCTTCGTACTAAAATAAGTGTCGC 59.995 44.000 0.00 0.00 32.36 5.19
2251 2322 6.324819 TCCCTTCGTACTAAAATAAGTGTCG 58.675 40.000 0.00 0.00 33.03 4.35
2252 2323 7.318893 ACTCCCTTCGTACTAAAATAAGTGTC 58.681 38.462 0.00 0.00 0.00 3.67
2253 2324 7.237209 ACTCCCTTCGTACTAAAATAAGTGT 57.763 36.000 0.00 0.00 0.00 3.55
2265 2336 9.367444 CCATGATTATTTATACTCCCTTCGTAC 57.633 37.037 0.00 0.00 0.00 3.67
2266 2337 9.096823 ACCATGATTATTTATACTCCCTTCGTA 57.903 33.333 0.00 0.00 0.00 3.43
2267 2338 7.974504 ACCATGATTATTTATACTCCCTTCGT 58.025 34.615 0.00 0.00 0.00 3.85
2268 2339 8.094548 TGACCATGATTATTTATACTCCCTTCG 58.905 37.037 0.00 0.00 0.00 3.79
2269 2340 9.793259 TTGACCATGATTATTTATACTCCCTTC 57.207 33.333 0.00 0.00 0.00 3.46
2278 2349 8.924511 ACGAGGATTTGACCATGATTATTTAT 57.075 30.769 0.00 0.00 0.00 1.40
2280 2351 8.924511 ATACGAGGATTTGACCATGATTATTT 57.075 30.769 0.00 0.00 0.00 1.40
2282 2353 9.605275 CATATACGAGGATTTGACCATGATTAT 57.395 33.333 0.00 0.00 0.00 1.28
2283 2354 8.593679 ACATATACGAGGATTTGACCATGATTA 58.406 33.333 0.00 0.00 0.00 1.75
2284 2355 7.453393 ACATATACGAGGATTTGACCATGATT 58.547 34.615 0.00 0.00 0.00 2.57
2285 2356 7.009179 ACATATACGAGGATTTGACCATGAT 57.991 36.000 0.00 0.00 0.00 2.45
2286 2357 6.419484 ACATATACGAGGATTTGACCATGA 57.581 37.500 0.00 0.00 0.00 3.07
2287 2358 6.813649 CCTACATATACGAGGATTTGACCATG 59.186 42.308 0.00 0.00 31.45 3.66
2288 2359 6.724441 TCCTACATATACGAGGATTTGACCAT 59.276 38.462 0.00 0.00 34.36 3.55
2289 2360 6.015688 GTCCTACATATACGAGGATTTGACCA 60.016 42.308 0.00 0.00 41.38 4.02
2290 2361 6.208994 AGTCCTACATATACGAGGATTTGACC 59.791 42.308 0.00 0.00 41.38 4.02
2291 2362 7.040617 TCAGTCCTACATATACGAGGATTTGAC 60.041 40.741 0.00 0.00 41.38 3.18
2292 2363 7.002276 TCAGTCCTACATATACGAGGATTTGA 58.998 38.462 0.00 7.15 41.38 2.69
2293 2364 7.215719 TCAGTCCTACATATACGAGGATTTG 57.784 40.000 0.00 5.50 41.38 2.32
2294 2365 8.423906 AATCAGTCCTACATATACGAGGATTT 57.576 34.615 0.00 0.00 41.38 2.17
2295 2366 8.423906 AAATCAGTCCTACATATACGAGGATT 57.576 34.615 0.00 0.00 41.38 3.01
2296 2367 9.702253 ATAAATCAGTCCTACATATACGAGGAT 57.298 33.333 0.00 0.00 41.38 3.24
2297 2368 8.957466 CATAAATCAGTCCTACATATACGAGGA 58.043 37.037 0.00 0.00 37.02 3.71
2298 2369 7.702772 GCATAAATCAGTCCTACATATACGAGG 59.297 40.741 0.00 0.00 0.00 4.63
2299 2370 8.462811 AGCATAAATCAGTCCTACATATACGAG 58.537 37.037 0.00 0.00 0.00 4.18
2300 2371 8.349568 AGCATAAATCAGTCCTACATATACGA 57.650 34.615 0.00 0.00 0.00 3.43
2301 2372 8.988064 AAGCATAAATCAGTCCTACATATACG 57.012 34.615 0.00 0.00 0.00 3.06
2306 2377 9.712305 GTACATAAGCATAAATCAGTCCTACAT 57.288 33.333 0.00 0.00 0.00 2.29
2307 2378 8.924303 AGTACATAAGCATAAATCAGTCCTACA 58.076 33.333 0.00 0.00 0.00 2.74
2308 2379 9.413048 GAGTACATAAGCATAAATCAGTCCTAC 57.587 37.037 0.00 0.00 0.00 3.18
2309 2380 8.585881 GGAGTACATAAGCATAAATCAGTCCTA 58.414 37.037 0.00 0.00 0.00 2.94
2310 2381 7.291182 AGGAGTACATAAGCATAAATCAGTCCT 59.709 37.037 0.00 0.00 0.00 3.85
2311 2382 7.445945 AGGAGTACATAAGCATAAATCAGTCC 58.554 38.462 0.00 0.00 0.00 3.85
2312 2383 8.894768 AAGGAGTACATAAGCATAAATCAGTC 57.105 34.615 0.00 0.00 0.00 3.51
2320 2391 9.899661 ACAACATTAAAGGAGTACATAAGCATA 57.100 29.630 0.00 0.00 0.00 3.14
2321 2392 8.807948 ACAACATTAAAGGAGTACATAAGCAT 57.192 30.769 0.00 0.00 0.00 3.79
2322 2393 9.378551 CTACAACATTAAAGGAGTACATAAGCA 57.621 33.333 0.00 0.00 0.00 3.91
2323 2394 9.379791 ACTACAACATTAAAGGAGTACATAAGC 57.620 33.333 0.00 0.00 0.00 3.09
2328 2399 9.647797 CATGTACTACAACATTAAAGGAGTACA 57.352 33.333 16.50 16.50 46.88 2.90
2329 2400 9.649167 ACATGTACTACAACATTAAAGGAGTAC 57.351 33.333 0.00 7.13 38.01 2.73
2330 2401 9.865321 GACATGTACTACAACATTAAAGGAGTA 57.135 33.333 0.00 0.00 38.01 2.59
2331 2402 8.594550 AGACATGTACTACAACATTAAAGGAGT 58.405 33.333 0.00 0.00 38.01 3.85
2332 2403 9.436957 AAGACATGTACTACAACATTAAAGGAG 57.563 33.333 0.00 0.00 38.01 3.69
2333 2404 9.787435 AAAGACATGTACTACAACATTAAAGGA 57.213 29.630 0.00 0.00 38.01 3.36
2344 2415 9.398538 ACAGGTTTTAAAAAGACATGTACTACA 57.601 29.630 6.95 0.00 36.65 2.74
2345 2416 9.659830 CACAGGTTTTAAAAAGACATGTACTAC 57.340 33.333 8.11 0.00 36.32 2.73
2346 2417 9.398538 ACACAGGTTTTAAAAAGACATGTACTA 57.601 29.630 8.11 0.00 36.32 1.82
2347 2418 8.188139 CACACAGGTTTTAAAAAGACATGTACT 58.812 33.333 8.11 0.00 36.32 2.73
2348 2419 7.971722 ACACACAGGTTTTAAAAAGACATGTAC 59.028 33.333 8.11 0.00 36.32 2.90
2349 2420 8.057536 ACACACAGGTTTTAAAAAGACATGTA 57.942 30.769 8.11 0.00 36.32 2.29
2350 2421 6.930731 ACACACAGGTTTTAAAAAGACATGT 58.069 32.000 0.00 0.00 38.65 3.21
2351 2422 7.826260 AACACACAGGTTTTAAAAAGACATG 57.174 32.000 1.31 2.02 0.00 3.21
2352 2423 8.745590 ACTAACACACAGGTTTTAAAAAGACAT 58.254 29.630 1.31 0.00 32.29 3.06
2353 2424 8.113173 ACTAACACACAGGTTTTAAAAAGACA 57.887 30.769 1.31 0.00 32.29 3.41
2354 2425 8.975410 AACTAACACACAGGTTTTAAAAAGAC 57.025 30.769 1.31 0.00 32.29 3.01
2359 2430 9.843334 CTGTTTAACTAACACACAGGTTTTAAA 57.157 29.630 0.00 0.00 41.73 1.52
2360 2431 9.012161 ACTGTTTAACTAACACACAGGTTTTAA 57.988 29.630 6.25 0.00 41.73 1.52
2361 2432 8.564509 ACTGTTTAACTAACACACAGGTTTTA 57.435 30.769 6.25 0.00 41.73 1.52
2362 2433 7.457024 ACTGTTTAACTAACACACAGGTTTT 57.543 32.000 6.25 0.00 41.73 2.43
2363 2434 7.457024 AACTGTTTAACTAACACACAGGTTT 57.543 32.000 6.25 0.00 41.73 3.27
2364 2435 7.457024 AAACTGTTTAACTAACACACAGGTT 57.543 32.000 3.51 3.16 41.73 3.50
2365 2436 8.617809 CATAAACTGTTTAACTAACACACAGGT 58.382 33.333 16.14 0.00 41.73 4.00
2366 2437 8.617809 ACATAAACTGTTTAACTAACACACAGG 58.382 33.333 16.14 0.00 41.73 4.00
2367 2438 9.433317 CACATAAACTGTTTAACTAACACACAG 57.567 33.333 16.14 0.00 41.73 3.66
2368 2439 8.948145 ACACATAAACTGTTTAACTAACACACA 58.052 29.630 16.14 0.00 41.73 3.72
2369 2440 9.777575 AACACATAAACTGTTTAACTAACACAC 57.222 29.630 16.14 0.00 41.73 3.82
2370 2441 9.776158 CAACACATAAACTGTTTAACTAACACA 57.224 29.630 16.14 0.00 41.73 3.72
2371 2442 9.991388 TCAACACATAAACTGTTTAACTAACAC 57.009 29.630 16.14 0.00 41.73 3.32
2372 2443 9.991388 GTCAACACATAAACTGTTTAACTAACA 57.009 29.630 16.14 0.00 44.31 2.41
2413 2484 6.751514 TCATGCGAGGTGTTACATATTTTT 57.248 33.333 0.00 0.00 0.00 1.94
2414 2485 6.942532 ATCATGCGAGGTGTTACATATTTT 57.057 33.333 0.00 0.00 0.00 1.82
2415 2486 8.445275 TTTATCATGCGAGGTGTTACATATTT 57.555 30.769 0.00 0.00 0.00 1.40
2416 2487 8.621532 ATTTATCATGCGAGGTGTTACATATT 57.378 30.769 0.00 0.00 0.00 1.28
2417 2488 9.151471 GTATTTATCATGCGAGGTGTTACATAT 57.849 33.333 0.00 0.00 0.00 1.78
2418 2489 8.364894 AGTATTTATCATGCGAGGTGTTACATA 58.635 33.333 0.00 0.00 0.00 2.29
2419 2490 7.217200 AGTATTTATCATGCGAGGTGTTACAT 58.783 34.615 0.00 0.00 0.00 2.29
2420 2491 6.578944 AGTATTTATCATGCGAGGTGTTACA 58.421 36.000 0.00 0.00 0.00 2.41
2421 2492 7.866393 AGTAGTATTTATCATGCGAGGTGTTAC 59.134 37.037 0.00 0.00 0.00 2.50
2422 2493 7.948357 AGTAGTATTTATCATGCGAGGTGTTA 58.052 34.615 0.00 0.00 0.00 2.41
2423 2494 6.817184 AGTAGTATTTATCATGCGAGGTGTT 58.183 36.000 0.00 0.00 0.00 3.32
2424 2495 6.265649 AGAGTAGTATTTATCATGCGAGGTGT 59.734 38.462 0.00 0.00 0.00 4.16
2425 2496 6.682746 AGAGTAGTATTTATCATGCGAGGTG 58.317 40.000 0.00 0.00 0.00 4.00
2426 2497 6.717540 AGAGAGTAGTATTTATCATGCGAGGT 59.282 38.462 0.00 0.00 0.00 3.85
2427 2498 7.151999 AGAGAGTAGTATTTATCATGCGAGG 57.848 40.000 0.00 0.00 0.00 4.63
2428 2499 7.247728 GGAGAGAGTAGTATTTATCATGCGAG 58.752 42.308 0.00 0.00 0.00 5.03
2429 2500 6.128254 CGGAGAGAGTAGTATTTATCATGCGA 60.128 42.308 0.00 0.00 0.00 5.10
2430 2501 6.024664 CGGAGAGAGTAGTATTTATCATGCG 58.975 44.000 0.00 0.00 0.00 4.73
2431 2502 6.915349 ACGGAGAGAGTAGTATTTATCATGC 58.085 40.000 0.00 0.00 0.00 4.06
2432 2503 8.353684 ACAACGGAGAGAGTAGTATTTATCATG 58.646 37.037 0.00 0.00 0.00 3.07
2433 2504 8.466617 ACAACGGAGAGAGTAGTATTTATCAT 57.533 34.615 0.00 0.00 0.00 2.45
2434 2505 7.876936 ACAACGGAGAGAGTAGTATTTATCA 57.123 36.000 0.00 0.00 0.00 2.15
2469 2540 9.921637 GGTTTGACTTTCCAAAAATGTATATGA 57.078 29.630 0.00 0.00 37.72 2.15
2470 2541 9.927668 AGGTTTGACTTTCCAAAAATGTATATG 57.072 29.630 0.00 0.00 37.72 1.78
2472 2543 9.137459 TGAGGTTTGACTTTCCAAAAATGTATA 57.863 29.630 0.00 0.00 37.72 1.47
2473 2544 7.926018 GTGAGGTTTGACTTTCCAAAAATGTAT 59.074 33.333 0.00 0.00 37.72 2.29
2474 2545 7.093727 TGTGAGGTTTGACTTTCCAAAAATGTA 60.094 33.333 0.00 0.00 37.72 2.29
2475 2546 6.106003 GTGAGGTTTGACTTTCCAAAAATGT 58.894 36.000 0.00 0.00 37.72 2.71
2476 2547 6.105333 TGTGAGGTTTGACTTTCCAAAAATG 58.895 36.000 0.00 0.00 37.72 2.32
2477 2548 6.293004 TGTGAGGTTTGACTTTCCAAAAAT 57.707 33.333 0.00 0.00 37.72 1.82
2478 2549 5.730296 TGTGAGGTTTGACTTTCCAAAAA 57.270 34.783 0.00 0.00 37.72 1.94
2479 2550 5.930837 ATGTGAGGTTTGACTTTCCAAAA 57.069 34.783 0.00 0.00 37.72 2.44
2480 2551 6.126409 AGTATGTGAGGTTTGACTTTCCAAA 58.874 36.000 0.00 0.00 34.03 3.28
2481 2552 5.690865 AGTATGTGAGGTTTGACTTTCCAA 58.309 37.500 0.00 0.00 0.00 3.53
2482 2553 5.304686 AGTATGTGAGGTTTGACTTTCCA 57.695 39.130 0.00 0.00 0.00 3.53
2483 2554 6.262273 TCAAAGTATGTGAGGTTTGACTTTCC 59.738 38.462 0.00 0.00 35.51 3.13
2484 2555 7.259290 TCAAAGTATGTGAGGTTTGACTTTC 57.741 36.000 0.00 0.00 35.51 2.62
2485 2556 7.502226 TGATCAAAGTATGTGAGGTTTGACTTT 59.498 33.333 0.00 0.00 40.67 2.66
2486 2557 6.998074 TGATCAAAGTATGTGAGGTTTGACTT 59.002 34.615 0.00 0.00 40.67 3.01
2487 2558 6.533730 TGATCAAAGTATGTGAGGTTTGACT 58.466 36.000 0.00 0.00 40.67 3.41
2488 2559 6.801539 TGATCAAAGTATGTGAGGTTTGAC 57.198 37.500 0.00 0.00 40.67 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.