Multiple sequence alignment - TraesCS1D01G115100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G115100 chr1D 100.000 2774 0 0 1 2774 110904670 110907443 0.000000e+00 5123.0
1 TraesCS1D01G115100 chr1D 95.855 193 8 0 1987 2179 298577586 298577778 2.070000e-81 313.0
2 TraesCS1D01G115100 chr1D 98.295 176 3 0 1993 2168 427704534 427704709 2.680000e-80 309.0
3 TraesCS1D01G115100 chr7A 92.799 1472 75 15 1 1459 625674453 625675906 0.000000e+00 2102.0
4 TraesCS1D01G115100 chr7A 90.946 1469 80 18 5 1459 625641684 625643113 0.000000e+00 1927.0
5 TraesCS1D01G115100 chr7A 85.369 704 70 6 8 708 631653206 631652533 0.000000e+00 699.0
6 TraesCS1D01G115100 chr7A 89.397 481 43 5 2300 2774 206774528 206774050 1.420000e-167 599.0
7 TraesCS1D01G115100 chr7A 84.632 475 36 17 1458 1918 625643196 625643647 3.280000e-119 438.0
8 TraesCS1D01G115100 chr7A 82.887 485 26 16 1456 1925 625675987 625676429 1.560000e-102 383.0
9 TraesCS1D01G115100 chr6B 90.773 1474 83 20 1 1459 694680475 694681910 0.000000e+00 1919.0
10 TraesCS1D01G115100 chr6B 93.878 196 11 1 1985 2179 213152564 213152369 7.510000e-76 294.0
11 TraesCS1D01G115100 chr1B 94.788 921 32 12 1 916 169024454 169025363 0.000000e+00 1421.0
12 TraesCS1D01G115100 chr1B 92.412 514 20 7 1190 1696 169028965 169029466 0.000000e+00 715.0
13 TraesCS1D01G115100 chr1B 92.453 106 2 3 1786 1891 169029469 169029568 2.230000e-31 147.0
14 TraesCS1D01G115100 chr1B 90.566 106 4 4 1786 1891 169029795 169029894 4.820000e-28 135.0
15 TraesCS1D01G115100 chr1B 100.000 32 0 0 1665 1696 169029761 169029792 2.980000e-05 60.2
16 TraesCS1D01G115100 chr7D 92.680 970 48 13 1 953 543730913 543731876 0.000000e+00 1376.0
17 TraesCS1D01G115100 chr7D 87.864 206 13 2 1456 1649 543732415 543732620 5.970000e-57 231.0
18 TraesCS1D01G115100 chr7B 87.122 893 65 24 588 1459 587479499 587480362 0.000000e+00 966.0
19 TraesCS1D01G115100 chr7B 86.674 893 69 31 588 1459 587518760 587519623 0.000000e+00 944.0
20 TraesCS1D01G115100 chr7B 86.168 882 67 22 586 1459 587101595 587102429 0.000000e+00 902.0
21 TraesCS1D01G115100 chr7B 85.601 882 63 25 586 1459 587266811 587267636 0.000000e+00 867.0
22 TraesCS1D01G115100 chr7B 89.216 714 43 12 754 1459 587440670 587441357 0.000000e+00 861.0
23 TraesCS1D01G115100 chr7B 87.743 669 62 11 1 653 569440628 569439964 0.000000e+00 763.0
24 TraesCS1D01G115100 chr7B 87.761 670 47 13 792 1452 587615241 587615884 0.000000e+00 750.0
25 TraesCS1D01G115100 chr7B 87.712 236 24 1 492 722 587464293 587464528 1.270000e-68 270.0
26 TraesCS1D01G115100 chr7B 87.712 236 24 1 492 722 587503572 587503807 1.270000e-68 270.0
27 TraesCS1D01G115100 chr1A 91.441 479 33 5 2302 2774 278230061 278229585 0.000000e+00 651.0
28 TraesCS1D01G115100 chr1A 89.938 487 40 5 2292 2774 252737451 252737932 1.090000e-173 619.0
29 TraesCS1D01G115100 chr2D 91.232 479 35 4 2300 2774 38173801 38173326 0.000000e+00 645.0
30 TraesCS1D01G115100 chr2D 96.296 189 7 0 1988 2176 62026292 62026104 7.460000e-81 311.0
31 TraesCS1D01G115100 chr5A 89.592 490 43 5 2289 2774 605419963 605420448 1.410000e-172 616.0
32 TraesCS1D01G115100 chrUn 89.958 478 37 5 2300 2774 97100334 97099865 8.500000e-170 606.0
33 TraesCS1D01G115100 chrUn 98.315 178 2 1 1998 2174 102837099 102836922 7.460000e-81 311.0
34 TraesCS1D01G115100 chr4D 90.126 476 34 6 2304 2774 370672689 370672222 8.500000e-170 606.0
35 TraesCS1D01G115100 chr4D 98.830 171 1 1 1998 2168 472411891 472412060 1.250000e-78 303.0
36 TraesCS1D01G115100 chr2A 89.087 504 33 6 957 1460 701782492 701782011 8.500000e-170 606.0
37 TraesCS1D01G115100 chr2A 85.608 403 26 11 1456 1844 701781919 701781535 7.200000e-106 394.0
38 TraesCS1D01G115100 chr2A 83.374 409 33 17 532 918 701783101 701782706 2.050000e-91 346.0
39 TraesCS1D01G115100 chr5D 89.506 486 40 5 2292 2774 420377073 420377550 3.060000e-169 604.0
40 TraesCS1D01G115100 chr5D 96.875 192 4 2 1986 2176 539072829 539072639 1.240000e-83 320.0
41 TraesCS1D01G115100 chr5D 95.361 194 7 2 1981 2172 218937284 218937477 9.650000e-80 307.0
42 TraesCS1D01G115100 chr4A 89.419 482 43 4 2299 2774 223891765 223892244 3.950000e-168 601.0
43 TraesCS1D01G115100 chr4A 85.577 520 60 8 1 520 141909542 141909038 5.260000e-147 531.0
44 TraesCS1D01G115100 chr4B 85.326 552 67 7 1 552 527592897 527593434 2.410000e-155 558.0
45 TraesCS1D01G115100 chr6D 95.238 189 5 3 1990 2177 470689539 470689354 2.090000e-76 296.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G115100 chr1D 110904670 110907443 2773 False 5123.000000 5123 100.0000 1 2774 1 chr1D.!!$F1 2773
1 TraesCS1D01G115100 chr7A 625674453 625676429 1976 False 1242.500000 2102 87.8430 1 1925 2 chr7A.!!$F2 1924
2 TraesCS1D01G115100 chr7A 625641684 625643647 1963 False 1182.500000 1927 87.7890 5 1918 2 chr7A.!!$F1 1913
3 TraesCS1D01G115100 chr7A 631652533 631653206 673 True 699.000000 699 85.3690 8 708 1 chr7A.!!$R2 700
4 TraesCS1D01G115100 chr6B 694680475 694681910 1435 False 1919.000000 1919 90.7730 1 1459 1 chr6B.!!$F1 1458
5 TraesCS1D01G115100 chr1B 169024454 169029894 5440 False 495.640000 1421 94.0438 1 1891 5 chr1B.!!$F1 1890
6 TraesCS1D01G115100 chr7D 543730913 543732620 1707 False 803.500000 1376 90.2720 1 1649 2 chr7D.!!$F1 1648
7 TraesCS1D01G115100 chr7B 587479499 587480362 863 False 966.000000 966 87.1220 588 1459 1 chr7B.!!$F5 871
8 TraesCS1D01G115100 chr7B 587518760 587519623 863 False 944.000000 944 86.6740 588 1459 1 chr7B.!!$F7 871
9 TraesCS1D01G115100 chr7B 587101595 587102429 834 False 902.000000 902 86.1680 586 1459 1 chr7B.!!$F1 873
10 TraesCS1D01G115100 chr7B 587266811 587267636 825 False 867.000000 867 85.6010 586 1459 1 chr7B.!!$F2 873
11 TraesCS1D01G115100 chr7B 587440670 587441357 687 False 861.000000 861 89.2160 754 1459 1 chr7B.!!$F3 705
12 TraesCS1D01G115100 chr7B 569439964 569440628 664 True 763.000000 763 87.7430 1 653 1 chr7B.!!$R1 652
13 TraesCS1D01G115100 chr7B 587615241 587615884 643 False 750.000000 750 87.7610 792 1452 1 chr7B.!!$F8 660
14 TraesCS1D01G115100 chr2A 701781535 701783101 1566 True 448.666667 606 86.0230 532 1844 3 chr2A.!!$R1 1312
15 TraesCS1D01G115100 chr4A 141909038 141909542 504 True 531.000000 531 85.5770 1 520 1 chr4A.!!$R1 519
16 TraesCS1D01G115100 chr4B 527592897 527593434 537 False 558.000000 558 85.3260 1 552 1 chr4B.!!$F1 551

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
603 635 1.670406 AGCTCGTACTCGTCGGTGT 60.67 57.895 0.0 0.0 38.33 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2434 6093 0.03213 GCGAACTCTCTCACACACCA 59.968 55.0 0.0 0.0 0.0 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
603 635 1.670406 AGCTCGTACTCGTCGGTGT 60.670 57.895 0.00 0.00 38.33 4.16
725 771 3.245948 CTGCTTGCTGGTGCGTGTC 62.246 63.158 0.00 0.00 43.34 3.67
729 775 4.662961 TGCTGGTGCGTGTCGGAG 62.663 66.667 0.00 0.00 43.34 4.63
730 776 4.357947 GCTGGTGCGTGTCGGAGA 62.358 66.667 0.00 0.00 0.00 3.71
751 799 6.418226 GGAGAATGTAGCGTAGTTATGAACAG 59.582 42.308 0.00 0.00 0.00 3.16
752 800 6.273825 AGAATGTAGCGTAGTTATGAACAGG 58.726 40.000 0.00 0.00 0.00 4.00
1407 4845 0.106918 ACCAGCCGGACAACTTCAAA 60.107 50.000 5.05 0.00 35.59 2.69
1410 4848 2.489971 CAGCCGGACAACTTCAAAGTA 58.510 47.619 5.05 0.00 38.57 2.24
1412 4850 1.193874 GCCGGACAACTTCAAAGTACG 59.806 52.381 5.05 0.00 38.57 3.67
1506 5046 0.876777 ACGTCGTCGGCATCAACAAA 60.877 50.000 7.05 0.00 41.85 2.83
1643 5195 1.669440 GCAGGGTACAACTCGTGGA 59.331 57.895 0.00 0.00 0.00 4.02
1644 5196 0.389948 GCAGGGTACAACTCGTGGAG 60.390 60.000 0.00 0.00 35.52 3.86
1645 5197 0.246635 CAGGGTACAACTCGTGGAGG 59.753 60.000 0.00 0.00 33.35 4.30
1646 5198 1.079336 GGGTACAACTCGTGGAGGC 60.079 63.158 0.00 0.00 33.35 4.70
1647 5199 1.445582 GGTACAACTCGTGGAGGCG 60.446 63.158 0.00 0.00 33.35 5.52
1648 5200 2.092882 GTACAACTCGTGGAGGCGC 61.093 63.158 0.00 0.00 33.35 6.53
1649 5201 3.620300 TACAACTCGTGGAGGCGCG 62.620 63.158 0.00 0.00 33.35 6.86
1743 5304 1.444553 CTTCTCCGTCAGTCGCCAC 60.445 63.158 0.00 0.00 38.35 5.01
1746 5307 3.633094 CTCCGTCAGTCGCCACCAG 62.633 68.421 0.00 0.00 38.35 4.00
1777 5338 0.183731 GGGTTTAGCAGGCTAGGCAT 59.816 55.000 19.70 6.50 0.00 4.40
1778 5339 1.312815 GGTTTAGCAGGCTAGGCATG 58.687 55.000 19.70 14.14 43.53 4.06
1813 5376 1.728971 GAACTGTTGATCAGACGCTGG 59.271 52.381 0.00 0.00 46.27 4.85
1814 5377 0.671781 ACTGTTGATCAGACGCTGGC 60.672 55.000 0.00 1.85 46.27 4.85
1815 5378 0.390866 CTGTTGATCAGACGCTGGCT 60.391 55.000 0.00 0.00 46.27 4.75
1816 5379 0.671472 TGTTGATCAGACGCTGGCTG 60.671 55.000 5.20 5.20 34.71 4.85
1853 5416 2.672874 TCTTGTAAGCGCTGCATGTTAG 59.327 45.455 12.58 7.93 0.00 2.34
1912 5475 6.656632 ACTACTCGGTGATCATGAATACAT 57.343 37.500 0.00 0.00 37.19 2.29
1920 5483 9.559732 TCGGTGATCATGAATACATATTTCTTT 57.440 29.630 0.00 0.00 35.09 2.52
1930 5493 9.929180 TGAATACATATTTCTTTATCTCCCTCG 57.071 33.333 0.00 0.00 0.00 4.63
1931 5494 9.930693 GAATACATATTTCTTTATCTCCCTCGT 57.069 33.333 0.00 0.00 0.00 4.18
1933 5496 7.604657 ACATATTTCTTTATCTCCCTCGTCT 57.395 36.000 0.00 0.00 0.00 4.18
1935 5498 8.578151 ACATATTTCTTTATCTCCCTCGTCTAC 58.422 37.037 0.00 0.00 0.00 2.59
1936 5499 8.798402 CATATTTCTTTATCTCCCTCGTCTACT 58.202 37.037 0.00 0.00 0.00 2.57
1938 5501 7.565323 TTTCTTTATCTCCCTCGTCTACTAC 57.435 40.000 0.00 0.00 0.00 2.73
1939 5502 6.497624 TCTTTATCTCCCTCGTCTACTACT 57.502 41.667 0.00 0.00 0.00 2.57
1940 5503 7.609097 TCTTTATCTCCCTCGTCTACTACTA 57.391 40.000 0.00 0.00 0.00 1.82
1941 5504 8.204903 TCTTTATCTCCCTCGTCTACTACTAT 57.795 38.462 0.00 0.00 0.00 2.12
1943 5506 9.941325 CTTTATCTCCCTCGTCTACTACTATTA 57.059 37.037 0.00 0.00 0.00 0.98
1944 5507 9.941325 TTTATCTCCCTCGTCTACTACTATTAG 57.059 37.037 0.00 0.00 0.00 1.73
1945 5508 5.792741 TCTCCCTCGTCTACTACTATTAGC 58.207 45.833 0.00 0.00 0.00 3.09
1946 5509 5.543405 TCTCCCTCGTCTACTACTATTAGCT 59.457 44.000 0.00 0.00 0.00 3.32
1947 5510 6.043012 TCTCCCTCGTCTACTACTATTAGCTT 59.957 42.308 0.00 0.00 0.00 3.74
1948 5511 5.996513 TCCCTCGTCTACTACTATTAGCTTG 59.003 44.000 0.00 0.00 0.00 4.01
1950 5513 5.335035 CCTCGTCTACTACTATTAGCTTGCC 60.335 48.000 0.00 0.00 0.00 4.52
1951 5514 4.518211 TCGTCTACTACTATTAGCTTGCCC 59.482 45.833 0.00 0.00 0.00 5.36
1952 5515 4.321082 CGTCTACTACTATTAGCTTGCCCC 60.321 50.000 0.00 0.00 0.00 5.80
1953 5516 4.587684 GTCTACTACTATTAGCTTGCCCCA 59.412 45.833 0.00 0.00 0.00 4.96
1954 5517 5.070047 GTCTACTACTATTAGCTTGCCCCAA 59.930 44.000 0.00 0.00 0.00 4.12
1955 5518 4.152284 ACTACTATTAGCTTGCCCCAAC 57.848 45.455 0.00 0.00 0.00 3.77
1956 5519 2.437085 ACTATTAGCTTGCCCCAACC 57.563 50.000 0.00 0.00 0.00 3.77
1957 5520 1.638589 ACTATTAGCTTGCCCCAACCA 59.361 47.619 0.00 0.00 0.00 3.67
1958 5521 2.244769 ACTATTAGCTTGCCCCAACCAT 59.755 45.455 0.00 0.00 0.00 3.55
1959 5522 3.461831 ACTATTAGCTTGCCCCAACCATA 59.538 43.478 0.00 0.00 0.00 2.74
1960 5523 2.435372 TTAGCTTGCCCCAACCATAG 57.565 50.000 0.00 0.00 0.00 2.23
1961 5524 0.106719 TAGCTTGCCCCAACCATAGC 60.107 55.000 0.00 0.00 0.00 2.97
1962 5525 1.380380 GCTTGCCCCAACCATAGCT 60.380 57.895 0.00 0.00 0.00 3.32
1963 5526 0.972471 GCTTGCCCCAACCATAGCTT 60.972 55.000 0.00 0.00 0.00 3.74
1965 5528 0.704076 TTGCCCCAACCATAGCTTCT 59.296 50.000 0.00 0.00 0.00 2.85
1966 5529 0.704076 TGCCCCAACCATAGCTTCTT 59.296 50.000 0.00 0.00 0.00 2.52
1967 5530 1.106285 GCCCCAACCATAGCTTCTTG 58.894 55.000 0.00 0.00 0.00 3.02
1968 5531 1.616994 GCCCCAACCATAGCTTCTTGT 60.617 52.381 0.00 0.00 0.00 3.16
1969 5532 2.807676 CCCCAACCATAGCTTCTTGTT 58.192 47.619 0.00 0.00 0.00 2.83
1971 5534 3.694566 CCCCAACCATAGCTTCTTGTTAC 59.305 47.826 0.00 0.00 0.00 2.50
1972 5535 3.374058 CCCAACCATAGCTTCTTGTTACG 59.626 47.826 0.00 0.00 0.00 3.18
1973 5536 4.250464 CCAACCATAGCTTCTTGTTACGA 58.750 43.478 0.00 0.00 0.00 3.43
1974 5537 4.092968 CCAACCATAGCTTCTTGTTACGAC 59.907 45.833 0.00 0.00 0.00 4.34
1975 5538 4.803098 ACCATAGCTTCTTGTTACGACT 57.197 40.909 0.00 0.00 0.00 4.18
1976 5539 5.909621 ACCATAGCTTCTTGTTACGACTA 57.090 39.130 0.00 0.00 0.00 2.59
1978 5541 4.733887 CCATAGCTTCTTGTTACGACTACG 59.266 45.833 0.00 0.00 45.75 3.51
1979 5542 5.448225 CCATAGCTTCTTGTTACGACTACGA 60.448 44.000 0.00 0.00 42.66 3.43
1980 5543 4.080969 AGCTTCTTGTTACGACTACGAG 57.919 45.455 0.00 0.00 42.66 4.18
1981 5544 3.501445 AGCTTCTTGTTACGACTACGAGT 59.499 43.478 0.00 0.00 42.66 4.18
1983 5546 4.785561 GCTTCTTGTTACGACTACGAGTAC 59.214 45.833 0.00 0.00 42.66 2.73
2020 5583 8.637986 AGAGAGTGCCTAGAACTTATTTAGATG 58.362 37.037 0.00 0.00 0.00 2.90
2022 5585 8.637986 AGAGTGCCTAGAACTTATTTAGATGAG 58.362 37.037 0.00 0.00 0.00 2.90
2023 5586 8.540507 AGTGCCTAGAACTTATTTAGATGAGA 57.459 34.615 0.00 0.00 0.00 3.27
2024 5587 9.153479 AGTGCCTAGAACTTATTTAGATGAGAT 57.847 33.333 0.00 0.00 0.00 2.75
2044 5607 8.908786 TGAGATATAATTTGGTCTCATTCACC 57.091 34.615 10.50 0.00 41.40 4.02
2045 5608 8.717717 TGAGATATAATTTGGTCTCATTCACCT 58.282 33.333 10.50 0.00 41.40 4.00
2046 5609 9.566432 GAGATATAATTTGGTCTCATTCACCTT 57.434 33.333 8.11 0.00 37.60 3.50
2058 5621 7.201522 GGTCTCATTCACCTTGAAAACAAAAAC 60.202 37.037 0.00 0.00 40.12 2.43
2059 5622 7.330700 GTCTCATTCACCTTGAAAACAAAAACA 59.669 33.333 0.00 0.00 40.12 2.83
2060 5623 7.545265 TCTCATTCACCTTGAAAACAAAAACAG 59.455 33.333 0.00 0.00 40.12 3.16
2061 5624 6.593382 TCATTCACCTTGAAAACAAAAACAGG 59.407 34.615 0.00 0.00 40.12 4.00
2063 5626 6.591750 TCACCTTGAAAACAAAAACAGGTA 57.408 33.333 0.00 0.00 0.00 3.08
2064 5627 6.391537 TCACCTTGAAAACAAAAACAGGTAC 58.608 36.000 0.00 0.00 0.00 3.34
2065 5628 6.015350 TCACCTTGAAAACAAAAACAGGTACA 60.015 34.615 0.00 0.00 0.00 2.90
2067 5630 6.647481 ACCTTGAAAACAAAAACAGGTACAAC 59.353 34.615 0.00 0.00 0.00 3.32
2070 5633 5.011738 TGAAAACAAAAACAGGTACAACCCA 59.988 36.000 0.00 0.00 39.75 4.51
2072 5635 2.424246 ACAAAAACAGGTACAACCCACG 59.576 45.455 0.00 0.00 39.75 4.94
2076 5639 0.391597 ACAGGTACAACCCACGTCAG 59.608 55.000 0.00 0.00 39.75 3.51
2080 5643 0.531090 GTACAACCCACGTCAGCACA 60.531 55.000 0.00 0.00 0.00 4.57
2081 5644 0.531090 TACAACCCACGTCAGCACAC 60.531 55.000 0.00 0.00 0.00 3.82
2082 5645 1.817520 CAACCCACGTCAGCACACA 60.818 57.895 0.00 0.00 0.00 3.72
2083 5646 1.817941 AACCCACGTCAGCACACAC 60.818 57.895 0.00 0.00 0.00 3.82
2096 5755 1.933181 GCACACACGCATCTTATAGCA 59.067 47.619 0.00 0.00 0.00 3.49
2097 5756 2.545526 GCACACACGCATCTTATAGCAT 59.454 45.455 0.00 0.00 0.00 3.79
2098 5757 3.363378 GCACACACGCATCTTATAGCATC 60.363 47.826 0.00 0.00 0.00 3.91
2099 5758 3.803778 CACACACGCATCTTATAGCATCA 59.196 43.478 0.00 0.00 0.00 3.07
2103 5762 4.687948 ACACGCATCTTATAGCATCACATC 59.312 41.667 0.00 0.00 0.00 3.06
2105 5764 4.248058 CGCATCTTATAGCATCACATCCA 58.752 43.478 0.00 0.00 0.00 3.41
2106 5765 4.692155 CGCATCTTATAGCATCACATCCAA 59.308 41.667 0.00 0.00 0.00 3.53
2107 5766 5.353400 CGCATCTTATAGCATCACATCCAAT 59.647 40.000 0.00 0.00 0.00 3.16
2109 5768 6.404403 GCATCTTATAGCATCACATCCAATGG 60.404 42.308 0.00 0.00 33.60 3.16
2110 5769 5.005740 TCTTATAGCATCACATCCAATGGC 58.994 41.667 0.00 0.00 33.60 4.40
2111 5770 3.520691 ATAGCATCACATCCAATGGCT 57.479 42.857 0.00 0.00 33.60 4.75
2113 5772 3.520691 AGCATCACATCCAATGGCTAT 57.479 42.857 0.00 0.00 33.60 2.97
2117 5776 5.834742 AGCATCACATCCAATGGCTATAAAA 59.165 36.000 0.00 0.00 33.60 1.52
2118 5777 6.015688 AGCATCACATCCAATGGCTATAAAAG 60.016 38.462 0.00 0.00 33.60 2.27
2119 5778 6.684686 CATCACATCCAATGGCTATAAAAGG 58.315 40.000 0.00 0.00 33.60 3.11
2121 5780 5.593909 TCACATCCAATGGCTATAAAAGGTG 59.406 40.000 0.00 0.00 33.60 4.00
2122 5781 5.593909 CACATCCAATGGCTATAAAAGGTGA 59.406 40.000 0.00 0.00 33.60 4.02
2123 5782 6.096705 CACATCCAATGGCTATAAAAGGTGAA 59.903 38.462 0.00 0.00 33.60 3.18
2125 5784 6.713762 TCCAATGGCTATAAAAGGTGAATG 57.286 37.500 0.00 0.00 0.00 2.67
2126 5785 6.430864 TCCAATGGCTATAAAAGGTGAATGA 58.569 36.000 0.00 0.00 0.00 2.57
2127 5786 6.547141 TCCAATGGCTATAAAAGGTGAATGAG 59.453 38.462 0.00 0.00 0.00 2.90
2128 5787 6.547141 CCAATGGCTATAAAAGGTGAATGAGA 59.453 38.462 0.00 0.00 0.00 3.27
2129 5788 7.420800 CAATGGCTATAAAAGGTGAATGAGAC 58.579 38.462 0.00 0.00 0.00 3.36
2131 5790 5.045213 TGGCTATAAAAGGTGAATGAGACCA 60.045 40.000 0.00 0.00 35.76 4.02
2132 5791 5.885912 GGCTATAAAAGGTGAATGAGACCAA 59.114 40.000 0.00 0.00 35.76 3.67
2133 5792 6.377146 GGCTATAAAAGGTGAATGAGACCAAA 59.623 38.462 0.00 0.00 35.76 3.28
2134 5793 7.251281 GCTATAAAAGGTGAATGAGACCAAAC 58.749 38.462 0.00 0.00 35.76 2.93
2135 5794 7.121315 GCTATAAAAGGTGAATGAGACCAAACT 59.879 37.037 0.00 0.00 35.76 2.66
2136 5795 9.667107 CTATAAAAGGTGAATGAGACCAAACTA 57.333 33.333 0.00 0.00 35.76 2.24
2140 5799 8.738645 AAAGGTGAATGAGACCAAACTATATC 57.261 34.615 0.00 0.00 35.76 1.63
2142 5801 7.731054 AGGTGAATGAGACCAAACTATATCTC 58.269 38.462 0.00 0.00 38.46 2.75
2169 5828 7.897575 CTAGATGAGTTCTAGCAAAACTGTT 57.102 36.000 0.32 0.00 45.63 3.16
2170 5829 8.316640 CTAGATGAGTTCTAGCAAAACTGTTT 57.683 34.615 0.00 0.00 45.63 2.83
2171 5830 7.573968 AGATGAGTTCTAGCAAAACTGTTTT 57.426 32.000 12.50 12.50 37.10 2.43
2172 5831 8.000780 AGATGAGTTCTAGCAAAACTGTTTTT 57.999 30.769 15.41 5.70 37.10 1.94
2200 5859 9.620660 AAAATTCGTGATCTTACATTTACCAAC 57.379 29.630 0.00 0.00 0.00 3.77
2201 5860 8.561738 AATTCGTGATCTTACATTTACCAACT 57.438 30.769 0.00 0.00 0.00 3.16
2202 5861 7.972832 TTCGTGATCTTACATTTACCAACTT 57.027 32.000 0.00 0.00 0.00 2.66
2203 5862 7.972832 TCGTGATCTTACATTTACCAACTTT 57.027 32.000 0.00 0.00 0.00 2.66
2204 5863 8.385898 TCGTGATCTTACATTTACCAACTTTT 57.614 30.769 0.00 0.00 0.00 2.27
2205 5864 8.842280 TCGTGATCTTACATTTACCAACTTTTT 58.158 29.630 0.00 0.00 0.00 1.94
2252 5911 8.783833 TCAAATTTGTGAACTTTTTCCAATCA 57.216 26.923 17.47 0.00 0.00 2.57
2253 5912 9.224267 TCAAATTTGTGAACTTTTTCCAATCAA 57.776 25.926 17.47 0.00 0.00 2.57
2254 5913 9.837525 CAAATTTGTGAACTTTTTCCAATCAAA 57.162 25.926 10.15 0.00 0.00 2.69
2257 5916 8.839310 TTTGTGAACTTTTTCCAATCAAAAGA 57.161 26.923 11.20 0.00 41.81 2.52
2258 5917 7.826260 TGTGAACTTTTTCCAATCAAAAGAC 57.174 32.000 11.20 6.28 41.81 3.01
2259 5918 7.610865 TGTGAACTTTTTCCAATCAAAAGACT 58.389 30.769 11.20 0.00 41.81 3.24
2260 5919 8.093927 TGTGAACTTTTTCCAATCAAAAGACTT 58.906 29.630 11.20 0.00 41.81 3.01
2261 5920 8.935844 GTGAACTTTTTCCAATCAAAAGACTTT 58.064 29.630 11.20 0.00 41.81 2.66
2262 5921 9.500785 TGAACTTTTTCCAATCAAAAGACTTTT 57.499 25.926 7.38 7.38 41.81 2.27
2315 5974 5.366829 AAAACTACGGAAACACTAATGCC 57.633 39.130 0.00 0.00 0.00 4.40
2316 5975 2.981898 ACTACGGAAACACTAATGCCC 58.018 47.619 0.00 0.00 0.00 5.36
2317 5976 2.303600 ACTACGGAAACACTAATGCCCA 59.696 45.455 0.00 0.00 0.00 5.36
2318 5977 1.530323 ACGGAAACACTAATGCCCAC 58.470 50.000 0.00 0.00 0.00 4.61
2319 5978 1.202830 ACGGAAACACTAATGCCCACA 60.203 47.619 0.00 0.00 0.00 4.17
2320 5979 1.199097 CGGAAACACTAATGCCCACAC 59.801 52.381 0.00 0.00 0.00 3.82
2321 5980 1.199097 GGAAACACTAATGCCCACACG 59.801 52.381 0.00 0.00 0.00 4.49
2322 5981 1.877443 GAAACACTAATGCCCACACGT 59.123 47.619 0.00 0.00 0.00 4.49
2323 5982 1.234821 AACACTAATGCCCACACGTG 58.765 50.000 15.48 15.48 0.00 4.49
2324 5983 0.107831 ACACTAATGCCCACACGTGT 59.892 50.000 17.22 17.22 33.03 4.49
2325 5984 0.516877 CACTAATGCCCACACGTGTG 59.483 55.000 36.13 36.13 45.23 3.82
2335 5994 3.650369 CACGTGTGGGTGTTAGCC 58.350 61.111 7.58 0.00 36.00 3.93
2336 5995 1.227704 CACGTGTGGGTGTTAGCCA 60.228 57.895 7.58 0.00 44.64 4.75
2342 6001 3.717842 TGGGTGTTAGCCAACTCAC 57.282 52.632 0.00 0.00 43.74 3.51
2343 6002 0.109723 TGGGTGTTAGCCAACTCACC 59.890 55.000 4.82 4.82 43.74 4.02
2344 6003 2.942641 GGTGTTAGCCAACTCACCC 58.057 57.895 0.00 0.00 42.90 4.61
2345 6004 0.109723 GGTGTTAGCCAACTCACCCA 59.890 55.000 0.00 0.00 42.90 4.51
2346 6005 1.235724 GTGTTAGCCAACTCACCCAC 58.764 55.000 0.00 0.00 35.56 4.61
2347 6006 0.840617 TGTTAGCCAACTCACCCACA 59.159 50.000 0.00 0.00 35.56 4.17
2348 6007 1.235724 GTTAGCCAACTCACCCACAC 58.764 55.000 0.00 0.00 0.00 3.82
2349 6008 0.250124 TTAGCCAACTCACCCACACG 60.250 55.000 0.00 0.00 0.00 4.49
2350 6009 2.725203 TAGCCAACTCACCCACACGC 62.725 60.000 0.00 0.00 0.00 5.34
2351 6010 2.978010 CCAACTCACCCACACGCC 60.978 66.667 0.00 0.00 0.00 5.68
2352 6011 2.111043 CAACTCACCCACACGCCT 59.889 61.111 0.00 0.00 0.00 5.52
2353 6012 1.961277 CAACTCACCCACACGCCTC 60.961 63.158 0.00 0.00 0.00 4.70
2354 6013 3.178540 AACTCACCCACACGCCTCC 62.179 63.158 0.00 0.00 0.00 4.30
2355 6014 3.625897 CTCACCCACACGCCTCCA 61.626 66.667 0.00 0.00 0.00 3.86
2356 6015 2.927856 TCACCCACACGCCTCCAT 60.928 61.111 0.00 0.00 0.00 3.41
2357 6016 2.436646 CACCCACACGCCTCCATC 60.437 66.667 0.00 0.00 0.00 3.51
2358 6017 4.082523 ACCCACACGCCTCCATCG 62.083 66.667 0.00 0.00 0.00 3.84
2366 6025 4.899239 GCCTCCATCGCCGTCCAG 62.899 72.222 0.00 0.00 0.00 3.86
2367 6026 3.461773 CCTCCATCGCCGTCCAGT 61.462 66.667 0.00 0.00 0.00 4.00
2368 6027 2.125326 CCTCCATCGCCGTCCAGTA 61.125 63.158 0.00 0.00 0.00 2.74
2369 6028 1.672854 CCTCCATCGCCGTCCAGTAA 61.673 60.000 0.00 0.00 0.00 2.24
2370 6029 0.527817 CTCCATCGCCGTCCAGTAAC 60.528 60.000 0.00 0.00 0.00 2.50
2371 6030 0.968901 TCCATCGCCGTCCAGTAACT 60.969 55.000 0.00 0.00 0.00 2.24
2372 6031 0.108329 CCATCGCCGTCCAGTAACTT 60.108 55.000 0.00 0.00 0.00 2.66
2373 6032 1.278238 CATCGCCGTCCAGTAACTTC 58.722 55.000 0.00 0.00 0.00 3.01
2374 6033 1.135083 CATCGCCGTCCAGTAACTTCT 60.135 52.381 0.00 0.00 0.00 2.85
2375 6034 0.242825 TCGCCGTCCAGTAACTTCTG 59.757 55.000 0.00 0.00 35.45 3.02
2376 6035 1.352156 CGCCGTCCAGTAACTTCTGC 61.352 60.000 0.00 0.00 34.47 4.26
2377 6036 0.320421 GCCGTCCAGTAACTTCTGCA 60.320 55.000 0.00 0.00 34.47 4.41
2378 6037 1.676014 GCCGTCCAGTAACTTCTGCAT 60.676 52.381 0.00 0.00 34.47 3.96
2379 6038 2.002586 CCGTCCAGTAACTTCTGCATG 58.997 52.381 0.00 0.00 34.47 4.06
2380 6039 2.353704 CCGTCCAGTAACTTCTGCATGA 60.354 50.000 0.00 0.00 34.47 3.07
2381 6040 3.325870 CGTCCAGTAACTTCTGCATGAA 58.674 45.455 0.00 0.00 34.47 2.57
2382 6041 3.935203 CGTCCAGTAACTTCTGCATGAAT 59.065 43.478 0.00 0.00 33.71 2.57
2383 6042 4.033358 CGTCCAGTAACTTCTGCATGAATC 59.967 45.833 0.00 0.00 33.71 2.52
2384 6043 5.181748 GTCCAGTAACTTCTGCATGAATCT 58.818 41.667 0.00 0.00 33.71 2.40
2385 6044 5.645497 GTCCAGTAACTTCTGCATGAATCTT 59.355 40.000 0.00 0.00 33.71 2.40
2386 6045 5.645067 TCCAGTAACTTCTGCATGAATCTTG 59.355 40.000 0.00 0.00 33.71 3.02
2387 6046 5.163683 CCAGTAACTTCTGCATGAATCTTGG 60.164 44.000 0.00 0.00 33.71 3.61
2388 6047 3.863142 AACTTCTGCATGAATCTTGGC 57.137 42.857 0.00 0.00 33.71 4.52
2389 6048 2.799017 ACTTCTGCATGAATCTTGGCA 58.201 42.857 0.00 0.00 33.71 4.92
2392 6051 3.983229 TGCATGAATCTTGGCAGGA 57.017 47.368 0.39 0.39 0.00 3.86
2393 6052 2.219080 TGCATGAATCTTGGCAGGAA 57.781 45.000 2.53 0.00 0.00 3.36
2394 6053 2.742348 TGCATGAATCTTGGCAGGAAT 58.258 42.857 2.53 0.00 0.00 3.01
2395 6054 3.101437 TGCATGAATCTTGGCAGGAATT 58.899 40.909 2.53 0.00 0.00 2.17
2396 6055 3.118920 TGCATGAATCTTGGCAGGAATTG 60.119 43.478 2.53 0.66 0.00 2.32
2397 6056 3.740141 GCATGAATCTTGGCAGGAATTGG 60.740 47.826 2.53 0.00 0.00 3.16
2407 6066 3.598019 GCAGGAATTGGCTGATTTTGA 57.402 42.857 0.00 0.00 0.00 2.69
2408 6067 4.133013 GCAGGAATTGGCTGATTTTGAT 57.867 40.909 0.00 0.00 0.00 2.57
2409 6068 4.510571 GCAGGAATTGGCTGATTTTGATT 58.489 39.130 0.00 0.00 0.00 2.57
2410 6069 4.331717 GCAGGAATTGGCTGATTTTGATTG 59.668 41.667 0.00 0.00 0.00 2.67
2411 6070 5.484715 CAGGAATTGGCTGATTTTGATTGT 58.515 37.500 0.00 0.00 0.00 2.71
2412 6071 5.579511 CAGGAATTGGCTGATTTTGATTGTC 59.420 40.000 0.00 0.00 0.00 3.18
2413 6072 5.246656 AGGAATTGGCTGATTTTGATTGTCA 59.753 36.000 0.00 0.00 0.00 3.58
2414 6073 5.349543 GGAATTGGCTGATTTTGATTGTCAC 59.650 40.000 0.00 0.00 0.00 3.67
2415 6074 3.557577 TGGCTGATTTTGATTGTCACG 57.442 42.857 0.00 0.00 0.00 4.35
2416 6075 2.884012 TGGCTGATTTTGATTGTCACGT 59.116 40.909 0.00 0.00 0.00 4.49
2417 6076 4.068599 TGGCTGATTTTGATTGTCACGTA 58.931 39.130 0.00 0.00 0.00 3.57
2418 6077 4.154015 TGGCTGATTTTGATTGTCACGTAG 59.846 41.667 0.00 0.00 0.00 3.51
2419 6078 4.437390 GGCTGATTTTGATTGTCACGTAGG 60.437 45.833 0.00 0.00 0.00 3.18
2420 6079 4.391830 GCTGATTTTGATTGTCACGTAGGA 59.608 41.667 0.00 0.00 0.00 2.94
2421 6080 5.671329 GCTGATTTTGATTGTCACGTAGGAC 60.671 44.000 0.00 0.00 38.29 3.85
2422 6081 5.301555 TGATTTTGATTGTCACGTAGGACA 58.698 37.500 4.71 4.71 45.54 4.02
2428 6087 1.705256 TGTCACGTAGGACAATTCGC 58.295 50.000 6.27 0.00 44.34 4.70
2429 6088 0.638746 GTCACGTAGGACAATTCGCG 59.361 55.000 0.00 0.00 37.73 5.87
2430 6089 0.241749 TCACGTAGGACAATTCGCGT 59.758 50.000 5.77 0.00 0.00 6.01
2431 6090 0.365523 CACGTAGGACAATTCGCGTG 59.634 55.000 5.77 0.00 42.39 5.34
2432 6091 0.038892 ACGTAGGACAATTCGCGTGT 60.039 50.000 5.77 2.50 0.00 4.49
2433 6092 0.365523 CGTAGGACAATTCGCGTGTG 59.634 55.000 5.77 5.40 0.00 3.82
2434 6093 1.425412 GTAGGACAATTCGCGTGTGT 58.575 50.000 5.77 8.97 0.00 3.72
2435 6094 1.126113 GTAGGACAATTCGCGTGTGTG 59.874 52.381 14.84 8.19 0.00 3.82
2436 6095 1.206578 GGACAATTCGCGTGTGTGG 59.793 57.895 14.84 1.13 0.00 4.17
2437 6096 1.503818 GGACAATTCGCGTGTGTGGT 61.504 55.000 14.84 4.11 0.00 4.16
2438 6097 0.384230 GACAATTCGCGTGTGTGGTG 60.384 55.000 14.84 4.49 0.00 4.17
2439 6098 1.092921 ACAATTCGCGTGTGTGGTGT 61.093 50.000 5.77 0.00 0.00 4.16
2440 6099 0.657077 CAATTCGCGTGTGTGGTGTG 60.657 55.000 5.77 0.00 0.00 3.82
2441 6100 1.092921 AATTCGCGTGTGTGGTGTGT 61.093 50.000 5.77 0.00 0.00 3.72
2442 6101 1.771073 ATTCGCGTGTGTGGTGTGTG 61.771 55.000 5.77 0.00 0.00 3.82
2443 6102 2.837371 TTCGCGTGTGTGGTGTGTGA 62.837 55.000 5.77 0.00 0.00 3.58
2444 6103 2.870341 CGCGTGTGTGGTGTGTGAG 61.870 63.158 0.00 0.00 0.00 3.51
2445 6104 1.520564 GCGTGTGTGGTGTGTGAGA 60.521 57.895 0.00 0.00 0.00 3.27
2446 6105 1.490693 GCGTGTGTGGTGTGTGAGAG 61.491 60.000 0.00 0.00 0.00 3.20
2447 6106 0.102300 CGTGTGTGGTGTGTGAGAGA 59.898 55.000 0.00 0.00 0.00 3.10
2448 6107 1.858091 GTGTGTGGTGTGTGAGAGAG 58.142 55.000 0.00 0.00 0.00 3.20
2449 6108 1.137086 GTGTGTGGTGTGTGAGAGAGT 59.863 52.381 0.00 0.00 0.00 3.24
2450 6109 1.831106 TGTGTGGTGTGTGAGAGAGTT 59.169 47.619 0.00 0.00 0.00 3.01
2451 6110 2.159099 TGTGTGGTGTGTGAGAGAGTTC 60.159 50.000 0.00 0.00 0.00 3.01
2452 6111 1.067060 TGTGGTGTGTGAGAGAGTTCG 59.933 52.381 0.00 0.00 0.00 3.95
2453 6112 0.032130 TGGTGTGTGAGAGAGTTCGC 59.968 55.000 0.00 0.00 0.00 4.70
2454 6113 0.667792 GGTGTGTGAGAGAGTTCGCC 60.668 60.000 0.00 0.00 0.00 5.54
2455 6114 0.667792 GTGTGTGAGAGAGTTCGCCC 60.668 60.000 0.00 0.00 0.00 6.13
2456 6115 1.444553 GTGTGAGAGAGTTCGCCCG 60.445 63.158 0.00 0.00 0.00 6.13
2457 6116 2.507324 GTGAGAGAGTTCGCCCGC 60.507 66.667 0.00 0.00 0.00 6.13
2458 6117 2.989253 TGAGAGAGTTCGCCCGCA 60.989 61.111 0.00 0.00 0.00 5.69
2459 6118 2.507324 GAGAGAGTTCGCCCGCAC 60.507 66.667 0.00 0.00 0.00 5.34
2460 6119 4.421479 AGAGAGTTCGCCCGCACG 62.421 66.667 0.00 0.00 0.00 5.34
2473 6132 3.119096 GCACGCCGGTTTCCTCTC 61.119 66.667 1.90 0.00 0.00 3.20
2474 6133 2.434359 CACGCCGGTTTCCTCTCC 60.434 66.667 1.90 0.00 0.00 3.71
2475 6134 4.065281 ACGCCGGTTTCCTCTCCG 62.065 66.667 1.90 0.00 45.42 4.63
2478 6137 4.814294 CCGGTTTCCTCTCCGCGG 62.814 72.222 22.12 22.12 44.63 6.46
2479 6138 4.065281 CGGTTTCCTCTCCGCGGT 62.065 66.667 27.15 0.00 40.28 5.68
2480 6139 2.125633 GGTTTCCTCTCCGCGGTC 60.126 66.667 27.15 6.44 0.00 4.79
2481 6140 2.654877 GTTTCCTCTCCGCGGTCA 59.345 61.111 27.15 11.99 0.00 4.02
2482 6141 1.005394 GTTTCCTCTCCGCGGTCAA 60.005 57.895 27.15 10.86 0.00 3.18
2483 6142 1.005394 TTTCCTCTCCGCGGTCAAC 60.005 57.895 27.15 0.00 0.00 3.18
2492 6151 4.322385 GCGGTCAACGGTTGCCAC 62.322 66.667 24.08 15.78 44.51 5.01
2493 6152 2.590575 CGGTCAACGGTTGCCACT 60.591 61.111 24.08 0.00 39.42 4.00
2494 6153 2.604174 CGGTCAACGGTTGCCACTC 61.604 63.158 24.08 10.77 39.42 3.51
2495 6154 2.604174 GGTCAACGGTTGCCACTCG 61.604 63.158 21.52 0.00 0.00 4.18
2496 6155 2.280524 TCAACGGTTGCCACTCGG 60.281 61.111 15.89 0.00 0.00 4.63
2497 6156 3.353836 CAACGGTTGCCACTCGGG 61.354 66.667 8.09 0.00 40.85 5.14
2498 6157 4.636435 AACGGTTGCCACTCGGGG 62.636 66.667 0.00 0.00 37.04 5.73
2571 6230 2.704758 CGTCAACCACGTCTCGTAC 58.295 57.895 0.00 0.00 44.07 3.67
2572 6231 0.236711 CGTCAACCACGTCTCGTACT 59.763 55.000 0.00 0.00 44.07 2.73
2573 6232 1.334419 CGTCAACCACGTCTCGTACTT 60.334 52.381 0.00 0.00 44.07 2.24
2574 6233 2.314122 GTCAACCACGTCTCGTACTTC 58.686 52.381 0.00 0.00 38.32 3.01
2575 6234 1.069703 TCAACCACGTCTCGTACTTCG 60.070 52.381 0.00 0.00 38.32 3.79
2576 6235 0.386478 AACCACGTCTCGTACTTCGC 60.386 55.000 0.00 0.00 38.32 4.70
2577 6236 1.513586 CCACGTCTCGTACTTCGCC 60.514 63.158 0.00 0.00 38.32 5.54
2578 6237 1.513586 CACGTCTCGTACTTCGCCC 60.514 63.158 0.00 0.00 38.32 6.13
2579 6238 2.101770 CGTCTCGTACTTCGCCCC 59.898 66.667 0.00 0.00 39.67 5.80
2580 6239 2.493501 GTCTCGTACTTCGCCCCC 59.506 66.667 0.00 0.00 39.67 5.40
2598 6257 3.470888 CTCCCCTCGCGGTTCCAT 61.471 66.667 6.13 0.00 0.00 3.41
2599 6258 3.006728 TCCCCTCGCGGTTCCATT 61.007 61.111 6.13 0.00 0.00 3.16
2600 6259 2.045340 CCCCTCGCGGTTCCATTT 60.045 61.111 6.13 0.00 0.00 2.32
2601 6260 1.222387 CCCCTCGCGGTTCCATTTA 59.778 57.895 6.13 0.00 0.00 1.40
2602 6261 1.093496 CCCCTCGCGGTTCCATTTAC 61.093 60.000 6.13 0.00 0.00 2.01
2603 6262 0.107848 CCCTCGCGGTTCCATTTACT 60.108 55.000 6.13 0.00 0.00 2.24
2604 6263 1.287425 CCTCGCGGTTCCATTTACTC 58.713 55.000 6.13 0.00 0.00 2.59
2605 6264 0.921347 CTCGCGGTTCCATTTACTCG 59.079 55.000 6.13 0.00 0.00 4.18
2606 6265 1.079875 TCGCGGTTCCATTTACTCGC 61.080 55.000 6.13 0.00 39.79 5.03
2607 6266 1.082117 CGCGGTTCCATTTACTCGCT 61.082 55.000 0.00 0.00 40.82 4.93
2608 6267 0.651031 GCGGTTCCATTTACTCGCTC 59.349 55.000 0.00 0.00 40.00 5.03
2609 6268 1.287425 CGGTTCCATTTACTCGCTCC 58.713 55.000 0.00 0.00 0.00 4.70
2610 6269 1.404986 CGGTTCCATTTACTCGCTCCA 60.405 52.381 0.00 0.00 0.00 3.86
2611 6270 2.007608 GGTTCCATTTACTCGCTCCAC 58.992 52.381 0.00 0.00 0.00 4.02
2612 6271 2.354805 GGTTCCATTTACTCGCTCCACT 60.355 50.000 0.00 0.00 0.00 4.00
2613 6272 3.335579 GTTCCATTTACTCGCTCCACTT 58.664 45.455 0.00 0.00 0.00 3.16
2614 6273 3.247006 TCCATTTACTCGCTCCACTTC 57.753 47.619 0.00 0.00 0.00 3.01
2615 6274 2.565391 TCCATTTACTCGCTCCACTTCA 59.435 45.455 0.00 0.00 0.00 3.02
2616 6275 3.197766 TCCATTTACTCGCTCCACTTCAT 59.802 43.478 0.00 0.00 0.00 2.57
2617 6276 3.941483 CCATTTACTCGCTCCACTTCATT 59.059 43.478 0.00 0.00 0.00 2.57
2618 6277 5.105106 TCCATTTACTCGCTCCACTTCATTA 60.105 40.000 0.00 0.00 0.00 1.90
2619 6278 5.006746 CCATTTACTCGCTCCACTTCATTAC 59.993 44.000 0.00 0.00 0.00 1.89
2620 6279 5.401531 TTTACTCGCTCCACTTCATTACT 57.598 39.130 0.00 0.00 0.00 2.24
2621 6280 3.512033 ACTCGCTCCACTTCATTACTC 57.488 47.619 0.00 0.00 0.00 2.59
2622 6281 2.826128 ACTCGCTCCACTTCATTACTCA 59.174 45.455 0.00 0.00 0.00 3.41
2623 6282 3.182967 CTCGCTCCACTTCATTACTCAC 58.817 50.000 0.00 0.00 0.00 3.51
2624 6283 2.094182 TCGCTCCACTTCATTACTCACC 60.094 50.000 0.00 0.00 0.00 4.02
2625 6284 2.633488 GCTCCACTTCATTACTCACCC 58.367 52.381 0.00 0.00 0.00 4.61
2626 6285 2.027192 GCTCCACTTCATTACTCACCCA 60.027 50.000 0.00 0.00 0.00 4.51
2627 6286 3.559171 GCTCCACTTCATTACTCACCCAA 60.559 47.826 0.00 0.00 0.00 4.12
2628 6287 4.003648 CTCCACTTCATTACTCACCCAAC 58.996 47.826 0.00 0.00 0.00 3.77
2629 6288 3.081804 CCACTTCATTACTCACCCAACC 58.918 50.000 0.00 0.00 0.00 3.77
2630 6289 3.081804 CACTTCATTACTCACCCAACCC 58.918 50.000 0.00 0.00 0.00 4.11
2631 6290 2.714250 ACTTCATTACTCACCCAACCCA 59.286 45.455 0.00 0.00 0.00 4.51
2632 6291 2.871096 TCATTACTCACCCAACCCAC 57.129 50.000 0.00 0.00 0.00 4.61
2633 6292 1.353022 TCATTACTCACCCAACCCACC 59.647 52.381 0.00 0.00 0.00 4.61
2634 6293 1.074727 CATTACTCACCCAACCCACCA 59.925 52.381 0.00 0.00 0.00 4.17
2635 6294 1.451449 TTACTCACCCAACCCACCAT 58.549 50.000 0.00 0.00 0.00 3.55
2636 6295 0.988832 TACTCACCCAACCCACCATC 59.011 55.000 0.00 0.00 0.00 3.51
2637 6296 1.000896 CTCACCCAACCCACCATCC 60.001 63.158 0.00 0.00 0.00 3.51
2638 6297 1.776293 TCACCCAACCCACCATCCA 60.776 57.895 0.00 0.00 0.00 3.41
2639 6298 1.145900 TCACCCAACCCACCATCCAT 61.146 55.000 0.00 0.00 0.00 3.41
2640 6299 0.628522 CACCCAACCCACCATCCATA 59.371 55.000 0.00 0.00 0.00 2.74
2641 6300 0.926293 ACCCAACCCACCATCCATAG 59.074 55.000 0.00 0.00 0.00 2.23
2642 6301 0.468029 CCCAACCCACCATCCATAGC 60.468 60.000 0.00 0.00 0.00 2.97
2643 6302 0.258484 CCAACCCACCATCCATAGCA 59.742 55.000 0.00 0.00 0.00 3.49
2644 6303 1.683943 CAACCCACCATCCATAGCAG 58.316 55.000 0.00 0.00 0.00 4.24
2645 6304 1.064463 CAACCCACCATCCATAGCAGT 60.064 52.381 0.00 0.00 0.00 4.40
2646 6305 1.298953 ACCCACCATCCATAGCAGTT 58.701 50.000 0.00 0.00 0.00 3.16
2647 6306 1.212935 ACCCACCATCCATAGCAGTTC 59.787 52.381 0.00 0.00 0.00 3.01
2648 6307 1.212688 CCCACCATCCATAGCAGTTCA 59.787 52.381 0.00 0.00 0.00 3.18
2649 6308 2.158564 CCCACCATCCATAGCAGTTCAT 60.159 50.000 0.00 0.00 0.00 2.57
2650 6309 3.559069 CCACCATCCATAGCAGTTCATT 58.441 45.455 0.00 0.00 0.00 2.57
2651 6310 3.567164 CCACCATCCATAGCAGTTCATTC 59.433 47.826 0.00 0.00 0.00 2.67
2652 6311 4.201657 CACCATCCATAGCAGTTCATTCA 58.798 43.478 0.00 0.00 0.00 2.57
2653 6312 4.641541 CACCATCCATAGCAGTTCATTCAA 59.358 41.667 0.00 0.00 0.00 2.69
2654 6313 5.301045 CACCATCCATAGCAGTTCATTCAAT 59.699 40.000 0.00 0.00 0.00 2.57
2655 6314 5.895534 ACCATCCATAGCAGTTCATTCAATT 59.104 36.000 0.00 0.00 0.00 2.32
2656 6315 6.183360 ACCATCCATAGCAGTTCATTCAATTG 60.183 38.462 0.00 0.00 0.00 2.32
2657 6316 5.840243 TCCATAGCAGTTCATTCAATTGG 57.160 39.130 5.42 0.00 0.00 3.16
2658 6317 5.508567 TCCATAGCAGTTCATTCAATTGGA 58.491 37.500 5.42 0.00 0.00 3.53
2659 6318 5.951148 TCCATAGCAGTTCATTCAATTGGAA 59.049 36.000 5.42 0.00 40.46 3.53
2660 6319 6.095860 TCCATAGCAGTTCATTCAATTGGAAG 59.904 38.462 5.42 0.00 39.30 3.46
2661 6320 6.095860 CCATAGCAGTTCATTCAATTGGAAGA 59.904 38.462 5.42 0.00 39.30 2.87
2662 6321 5.640189 AGCAGTTCATTCAATTGGAAGAG 57.360 39.130 5.42 0.00 39.30 2.85
2663 6322 5.319453 AGCAGTTCATTCAATTGGAAGAGA 58.681 37.500 5.42 0.00 39.30 3.10
2664 6323 5.771666 AGCAGTTCATTCAATTGGAAGAGAA 59.228 36.000 5.42 0.78 39.30 2.87
2665 6324 6.072064 AGCAGTTCATTCAATTGGAAGAGAAG 60.072 38.462 5.42 0.00 39.30 2.85
2666 6325 6.091437 CAGTTCATTCAATTGGAAGAGAAGC 58.909 40.000 5.42 0.18 39.30 3.86
2667 6326 5.184671 AGTTCATTCAATTGGAAGAGAAGCC 59.815 40.000 5.42 0.00 39.30 4.35
2668 6327 3.691118 TCATTCAATTGGAAGAGAAGCCG 59.309 43.478 5.42 0.00 39.30 5.52
2669 6328 3.417069 TTCAATTGGAAGAGAAGCCGA 57.583 42.857 5.42 0.00 0.00 5.54
2670 6329 2.977914 TCAATTGGAAGAGAAGCCGAG 58.022 47.619 5.42 0.00 0.00 4.63
2671 6330 2.567169 TCAATTGGAAGAGAAGCCGAGA 59.433 45.455 5.42 0.00 0.00 4.04
2672 6331 2.935201 CAATTGGAAGAGAAGCCGAGAG 59.065 50.000 0.00 0.00 0.00 3.20
2684 6343 3.188786 CGAGAGGAAAAGGCGGCG 61.189 66.667 0.51 0.51 0.00 6.46
2685 6344 2.820037 GAGAGGAAAAGGCGGCGG 60.820 66.667 9.78 0.00 0.00 6.13
2686 6345 3.310860 GAGAGGAAAAGGCGGCGGA 62.311 63.158 9.78 0.00 0.00 5.54
2687 6346 2.820037 GAGGAAAAGGCGGCGGAG 60.820 66.667 9.78 0.00 0.00 4.63
2688 6347 4.410400 AGGAAAAGGCGGCGGAGG 62.410 66.667 9.78 0.00 0.00 4.30
2699 6358 4.856607 GCGGAGGCGGAAGAGTCG 62.857 72.222 0.00 0.00 0.00 4.18
2700 6359 3.132139 CGGAGGCGGAAGAGTCGA 61.132 66.667 0.00 0.00 0.00 4.20
2701 6360 2.697761 CGGAGGCGGAAGAGTCGAA 61.698 63.158 0.00 0.00 0.00 3.71
2702 6361 1.590147 GGAGGCGGAAGAGTCGAAA 59.410 57.895 0.00 0.00 0.00 3.46
2703 6362 0.458716 GGAGGCGGAAGAGTCGAAAG 60.459 60.000 0.00 0.00 0.00 2.62
2704 6363 1.079317 GAGGCGGAAGAGTCGAAAGC 61.079 60.000 0.00 0.00 0.00 3.51
2705 6364 1.374252 GGCGGAAGAGTCGAAAGCA 60.374 57.895 0.00 0.00 0.00 3.91
2706 6365 0.741221 GGCGGAAGAGTCGAAAGCAT 60.741 55.000 0.00 0.00 0.00 3.79
2707 6366 1.079503 GCGGAAGAGTCGAAAGCATT 58.920 50.000 0.00 0.00 0.00 3.56
2708 6367 1.061276 GCGGAAGAGTCGAAAGCATTC 59.939 52.381 0.00 0.00 0.00 2.67
2716 6375 3.799755 GAAAGCATTCGCGGCCGT 61.800 61.111 28.70 2.82 45.49 5.68
2717 6376 3.718480 GAAAGCATTCGCGGCCGTC 62.718 63.158 28.70 18.03 45.49 4.79
2747 6406 4.831307 CGGACCGGAGCGTCTTCG 62.831 72.222 9.46 0.00 40.37 3.79
2767 6426 4.838152 GGAGCGCCCGCAGATTGA 62.838 66.667 15.50 0.00 44.88 2.57
2768 6427 2.819595 GAGCGCCCGCAGATTGAA 60.820 61.111 15.50 0.00 44.88 2.69
2769 6428 2.817423 GAGCGCCCGCAGATTGAAG 61.817 63.158 15.50 0.00 44.88 3.02
2770 6429 3.880846 GCGCCCGCAGATTGAAGG 61.881 66.667 7.91 0.00 41.49 3.46
2771 6430 2.436646 CGCCCGCAGATTGAAGGT 60.437 61.111 0.00 0.00 0.00 3.50
2772 6431 1.153449 CGCCCGCAGATTGAAGGTA 60.153 57.895 0.00 0.00 0.00 3.08
2773 6432 0.742990 CGCCCGCAGATTGAAGGTAA 60.743 55.000 0.00 0.00 0.00 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 4.681978 GCTCGTGGACGCCTGGTT 62.682 66.667 0.00 0.00 39.60 3.67
482 514 3.518998 CTCGTCCGCTCACCCGAT 61.519 66.667 0.00 0.00 0.00 4.18
603 635 4.508128 GAGACGGCGCATCGGGAA 62.508 66.667 10.83 0.00 0.00 3.97
679 711 3.506096 CCACCGTCTCGCGAGCTA 61.506 66.667 30.97 12.71 44.77 3.32
725 771 5.104562 TCATAACTACGCTACATTCTCCG 57.895 43.478 0.00 0.00 0.00 4.63
729 775 6.270815 TCCTGTTCATAACTACGCTACATTC 58.729 40.000 0.00 0.00 0.00 2.67
730 776 6.216801 TCCTGTTCATAACTACGCTACATT 57.783 37.500 0.00 0.00 0.00 2.71
751 799 1.377725 CATGTGCCACACCTCCTCC 60.378 63.158 0.00 0.00 32.73 4.30
752 800 2.042831 GCATGTGCCACACCTCCTC 61.043 63.158 0.00 0.00 32.73 3.71
1130 1602 0.032540 GTTGCACAGCCCTTCAAAGG 59.967 55.000 1.54 1.54 46.06 3.11
1407 4845 2.663196 GCCTTGGGCTGACGTACT 59.337 61.111 0.80 0.00 46.69 2.73
1506 5046 4.608774 TGACCGACGGTGACCCCT 62.609 66.667 27.26 0.00 35.25 4.79
1585 5137 4.437390 CGATGCTTGTTGGTACCTTTCATC 60.437 45.833 14.36 14.37 0.00 2.92
1706 5267 1.063031 GGTTTTCTTGCGCATTGAGC 58.937 50.000 12.75 5.34 40.87 4.26
1743 5304 2.360852 CCCTGTGAAGCTGGCTGG 60.361 66.667 0.00 0.00 35.15 4.85
1746 5307 1.168714 CTAAACCCTGTGAAGCTGGC 58.831 55.000 0.00 0.00 35.15 4.85
1747 5308 1.168714 GCTAAACCCTGTGAAGCTGG 58.831 55.000 0.00 0.00 36.12 4.85
1778 5339 3.077359 ACAGTTCAATTCTGCCTAGTGC 58.923 45.455 0.00 0.00 41.77 4.40
1779 5340 4.756642 TCAACAGTTCAATTCTGCCTAGTG 59.243 41.667 0.00 0.00 36.50 2.74
1813 5376 1.669779 GATGGAGCAAGATGACACAGC 59.330 52.381 0.00 0.00 0.00 4.40
1814 5377 3.263489 AGATGGAGCAAGATGACACAG 57.737 47.619 0.00 0.00 0.00 3.66
1815 5378 3.244665 ACAAGATGGAGCAAGATGACACA 60.245 43.478 0.00 0.00 0.00 3.72
1816 5379 3.341823 ACAAGATGGAGCAAGATGACAC 58.658 45.455 0.00 0.00 0.00 3.67
1853 5416 6.625873 AAGAGACAAATGGTTTCTTCTGTC 57.374 37.500 0.00 0.00 45.04 3.51
1912 5475 9.282569 GTAGTAGACGAGGGAGATAAAGAAATA 57.717 37.037 0.00 0.00 0.00 1.40
1920 5483 7.399765 AGCTAATAGTAGTAGACGAGGGAGATA 59.600 40.741 8.80 0.00 0.00 1.98
1925 5488 5.335035 GCAAGCTAATAGTAGTAGACGAGGG 60.335 48.000 8.80 0.00 0.00 4.30
1926 5489 5.335035 GGCAAGCTAATAGTAGTAGACGAGG 60.335 48.000 8.80 0.00 0.00 4.63
1928 5491 4.518211 GGGCAAGCTAATAGTAGTAGACGA 59.482 45.833 8.80 0.00 0.00 4.20
1929 5492 4.321082 GGGGCAAGCTAATAGTAGTAGACG 60.321 50.000 8.80 0.00 0.00 4.18
1930 5493 4.587684 TGGGGCAAGCTAATAGTAGTAGAC 59.412 45.833 8.80 0.72 0.00 2.59
1931 5494 4.811498 TGGGGCAAGCTAATAGTAGTAGA 58.189 43.478 8.80 0.00 0.00 2.59
1933 5496 4.102054 GGTTGGGGCAAGCTAATAGTAGTA 59.898 45.833 0.00 0.00 38.60 1.82
1935 5498 3.118038 TGGTTGGGGCAAGCTAATAGTAG 60.118 47.826 0.00 0.00 41.66 2.57
1936 5499 2.847449 TGGTTGGGGCAAGCTAATAGTA 59.153 45.455 0.00 0.00 41.66 1.82
1937 5500 1.638589 TGGTTGGGGCAAGCTAATAGT 59.361 47.619 0.00 0.00 41.66 2.12
1938 5501 2.435372 TGGTTGGGGCAAGCTAATAG 57.565 50.000 0.00 0.00 41.66 1.73
1939 5502 3.750599 GCTATGGTTGGGGCAAGCTAATA 60.751 47.826 0.00 0.00 41.66 0.98
1940 5503 2.949447 CTATGGTTGGGGCAAGCTAAT 58.051 47.619 0.00 0.00 41.66 1.73
1941 5504 1.684869 GCTATGGTTGGGGCAAGCTAA 60.685 52.381 0.00 0.00 41.66 3.09
1943 5506 1.380380 GCTATGGTTGGGGCAAGCT 60.380 57.895 0.00 0.00 41.66 3.74
1944 5507 0.972471 AAGCTATGGTTGGGGCAAGC 60.972 55.000 0.00 0.00 41.51 4.01
1945 5508 1.106285 GAAGCTATGGTTGGGGCAAG 58.894 55.000 0.00 0.00 0.00 4.01
1946 5509 0.704076 AGAAGCTATGGTTGGGGCAA 59.296 50.000 0.00 0.00 0.00 4.52
1947 5510 0.704076 AAGAAGCTATGGTTGGGGCA 59.296 50.000 0.00 0.00 0.00 5.36
1948 5511 1.106285 CAAGAAGCTATGGTTGGGGC 58.894 55.000 0.00 0.00 0.00 5.80
1950 5513 3.374058 CGTAACAAGAAGCTATGGTTGGG 59.626 47.826 2.55 0.00 0.00 4.12
1951 5514 4.092968 GTCGTAACAAGAAGCTATGGTTGG 59.907 45.833 2.55 0.00 0.00 3.77
1952 5515 4.929808 AGTCGTAACAAGAAGCTATGGTTG 59.070 41.667 2.55 0.05 0.00 3.77
1953 5516 5.148651 AGTCGTAACAAGAAGCTATGGTT 57.851 39.130 0.00 0.00 0.00 3.67
1954 5517 4.803098 AGTCGTAACAAGAAGCTATGGT 57.197 40.909 0.00 0.00 0.00 3.55
1955 5518 4.733887 CGTAGTCGTAACAAGAAGCTATGG 59.266 45.833 0.00 0.00 0.00 2.74
1956 5519 5.566623 TCGTAGTCGTAACAAGAAGCTATG 58.433 41.667 0.00 0.00 38.33 2.23
1957 5520 5.353678 ACTCGTAGTCGTAACAAGAAGCTAT 59.646 40.000 0.00 0.00 38.33 2.97
1958 5521 4.692625 ACTCGTAGTCGTAACAAGAAGCTA 59.307 41.667 0.00 0.00 38.33 3.32
1959 5522 3.501445 ACTCGTAGTCGTAACAAGAAGCT 59.499 43.478 0.00 0.00 38.33 3.74
1960 5523 3.819537 ACTCGTAGTCGTAACAAGAAGC 58.180 45.455 0.00 0.00 38.33 3.86
1961 5524 5.011991 CGTACTCGTAGTCGTAACAAGAAG 58.988 45.833 0.00 0.00 38.33 2.85
1962 5525 4.946255 CGTACTCGTAGTCGTAACAAGAA 58.054 43.478 0.00 0.00 38.33 2.52
1963 5526 4.568229 CGTACTCGTAGTCGTAACAAGA 57.432 45.455 0.00 0.00 38.33 3.02
1993 5556 8.596781 TCTAAATAAGTTCTAGGCACTCTCTT 57.403 34.615 0.00 0.00 41.75 2.85
1997 5560 8.634444 TCTCATCTAAATAAGTTCTAGGCACTC 58.366 37.037 0.00 0.00 41.75 3.51
2020 5583 9.566432 AAGGTGAATGAGACCAAATTATATCTC 57.434 33.333 0.00 6.03 38.46 2.75
2022 5585 9.342308 TCAAGGTGAATGAGACCAAATTATATC 57.658 33.333 0.00 0.00 35.76 1.63
2023 5586 9.699410 TTCAAGGTGAATGAGACCAAATTATAT 57.301 29.630 0.00 0.00 35.76 0.86
2024 5587 9.527157 TTTCAAGGTGAATGAGACCAAATTATA 57.473 29.630 0.00 0.00 36.11 0.98
2025 5588 8.421249 TTTCAAGGTGAATGAGACCAAATTAT 57.579 30.769 0.00 0.00 36.11 1.28
2026 5589 7.831691 TTTCAAGGTGAATGAGACCAAATTA 57.168 32.000 0.00 0.00 36.11 1.40
2027 5590 6.729690 TTTCAAGGTGAATGAGACCAAATT 57.270 33.333 0.00 0.00 36.11 1.82
2028 5591 6.098124 TGTTTTCAAGGTGAATGAGACCAAAT 59.902 34.615 0.00 0.00 36.11 2.32
2029 5592 5.420421 TGTTTTCAAGGTGAATGAGACCAAA 59.580 36.000 0.00 0.00 36.11 3.28
2030 5593 4.952957 TGTTTTCAAGGTGAATGAGACCAA 59.047 37.500 0.00 0.00 36.11 3.67
2031 5594 4.531854 TGTTTTCAAGGTGAATGAGACCA 58.468 39.130 0.00 0.00 36.11 4.02
2032 5595 5.514274 TTGTTTTCAAGGTGAATGAGACC 57.486 39.130 0.00 0.00 36.11 3.85
2033 5596 7.330700 TGTTTTTGTTTTCAAGGTGAATGAGAC 59.669 33.333 0.00 0.00 41.09 3.36
2034 5597 7.382110 TGTTTTTGTTTTCAAGGTGAATGAGA 58.618 30.769 0.00 0.00 41.09 3.27
2035 5598 7.201548 CCTGTTTTTGTTTTCAAGGTGAATGAG 60.202 37.037 0.00 0.00 41.09 2.90
2036 5599 6.593382 CCTGTTTTTGTTTTCAAGGTGAATGA 59.407 34.615 0.00 0.00 41.09 2.57
2037 5600 6.371271 ACCTGTTTTTGTTTTCAAGGTGAATG 59.629 34.615 0.00 0.00 41.09 2.67
2038 5601 6.472016 ACCTGTTTTTGTTTTCAAGGTGAAT 58.528 32.000 0.00 0.00 41.09 2.57
2039 5602 5.859495 ACCTGTTTTTGTTTTCAAGGTGAA 58.141 33.333 0.00 0.00 41.09 3.18
2040 5603 5.476091 ACCTGTTTTTGTTTTCAAGGTGA 57.524 34.783 0.00 0.00 41.09 4.02
2041 5604 6.159988 TGTACCTGTTTTTGTTTTCAAGGTG 58.840 36.000 0.00 0.00 41.09 4.00
2042 5605 6.347859 TGTACCTGTTTTTGTTTTCAAGGT 57.652 33.333 0.00 0.00 41.09 3.50
2043 5606 6.091577 GGTTGTACCTGTTTTTGTTTTCAAGG 59.908 38.462 0.00 0.00 36.86 3.61
2044 5607 6.091577 GGGTTGTACCTGTTTTTGTTTTCAAG 59.908 38.462 0.00 0.00 38.57 3.02
2045 5608 5.932883 GGGTTGTACCTGTTTTTGTTTTCAA 59.067 36.000 0.00 0.00 38.64 2.69
2046 5609 5.011738 TGGGTTGTACCTGTTTTTGTTTTCA 59.988 36.000 0.00 0.00 38.64 2.69
2058 5621 0.949105 GCTGACGTGGGTTGTACCTG 60.949 60.000 0.00 0.00 38.64 4.00
2059 5622 1.370064 GCTGACGTGGGTTGTACCT 59.630 57.895 0.00 0.00 38.64 3.08
2060 5623 1.070105 TGCTGACGTGGGTTGTACC 59.930 57.895 0.00 0.00 37.60 3.34
2061 5624 0.531090 TGTGCTGACGTGGGTTGTAC 60.531 55.000 0.00 0.00 0.00 2.90
2063 5626 1.817941 GTGTGCTGACGTGGGTTGT 60.818 57.895 0.00 0.00 0.00 3.32
2064 5627 1.817520 TGTGTGCTGACGTGGGTTG 60.818 57.895 0.00 0.00 0.00 3.77
2065 5628 1.817941 GTGTGTGCTGACGTGGGTT 60.818 57.895 0.00 0.00 0.00 4.11
2067 5630 3.337889 CGTGTGTGCTGACGTGGG 61.338 66.667 0.00 0.00 0.00 4.61
2070 5633 2.280119 ATGCGTGTGTGCTGACGT 60.280 55.556 0.00 0.00 37.89 4.34
2072 5635 1.428448 TAAGATGCGTGTGTGCTGAC 58.572 50.000 0.00 0.00 35.36 3.51
2076 5639 1.933181 TGCTATAAGATGCGTGTGTGC 59.067 47.619 0.00 0.00 0.00 4.57
2080 5643 4.058721 TGTGATGCTATAAGATGCGTGT 57.941 40.909 0.00 0.00 0.00 4.49
2081 5644 4.092529 GGATGTGATGCTATAAGATGCGTG 59.907 45.833 0.00 0.00 0.00 5.34
2082 5645 4.248859 GGATGTGATGCTATAAGATGCGT 58.751 43.478 0.00 0.00 0.00 5.24
2083 5646 4.248058 TGGATGTGATGCTATAAGATGCG 58.752 43.478 0.00 0.00 0.00 4.73
2096 5755 6.266103 CACCTTTTATAGCCATTGGATGTGAT 59.734 38.462 6.95 0.00 0.00 3.06
2097 5756 5.593909 CACCTTTTATAGCCATTGGATGTGA 59.406 40.000 6.95 0.00 0.00 3.58
2098 5757 5.593909 TCACCTTTTATAGCCATTGGATGTG 59.406 40.000 6.95 2.95 0.00 3.21
2099 5758 5.765510 TCACCTTTTATAGCCATTGGATGT 58.234 37.500 6.95 0.10 0.00 3.06
2103 5762 6.547141 TCTCATTCACCTTTTATAGCCATTGG 59.453 38.462 0.00 0.00 0.00 3.16
2105 5764 6.547510 GGTCTCATTCACCTTTTATAGCCATT 59.452 38.462 0.00 0.00 0.00 3.16
2106 5765 6.064717 GGTCTCATTCACCTTTTATAGCCAT 58.935 40.000 0.00 0.00 0.00 4.40
2107 5766 5.045213 TGGTCTCATTCACCTTTTATAGCCA 60.045 40.000 0.00 0.00 34.66 4.75
2109 5768 7.121315 AGTTTGGTCTCATTCACCTTTTATAGC 59.879 37.037 0.00 0.00 34.66 2.97
2110 5769 8.567285 AGTTTGGTCTCATTCACCTTTTATAG 57.433 34.615 0.00 0.00 34.66 1.31
2117 5776 7.345653 TGAGATATAGTTTGGTCTCATTCACCT 59.654 37.037 0.16 0.00 41.40 4.00
2118 5777 7.500992 TGAGATATAGTTTGGTCTCATTCACC 58.499 38.462 0.16 0.00 41.40 4.02
2146 5805 8.677148 AAAACAGTTTTGCTAGAACTCATCTA 57.323 30.769 10.62 0.00 39.71 1.98
2147 5806 7.573968 AAAACAGTTTTGCTAGAACTCATCT 57.426 32.000 10.62 0.00 42.48 2.90
2174 5833 9.620660 GTTGGTAAATGTAAGATCACGAATTTT 57.379 29.630 0.00 0.00 0.00 1.82
2175 5834 9.010029 AGTTGGTAAATGTAAGATCACGAATTT 57.990 29.630 0.00 0.00 0.00 1.82
2176 5835 8.561738 AGTTGGTAAATGTAAGATCACGAATT 57.438 30.769 0.00 0.00 0.00 2.17
2177 5836 8.561738 AAGTTGGTAAATGTAAGATCACGAAT 57.438 30.769 0.00 0.00 0.00 3.34
2178 5837 7.972832 AAGTTGGTAAATGTAAGATCACGAA 57.027 32.000 0.00 0.00 0.00 3.85
2179 5838 7.972832 AAAGTTGGTAAATGTAAGATCACGA 57.027 32.000 0.00 0.00 0.00 4.35
2226 5885 9.224267 TGATTGGAAAAAGTTCACAAATTTGAA 57.776 25.926 24.64 6.83 35.25 2.69
2227 5886 8.783833 TGATTGGAAAAAGTTCACAAATTTGA 57.216 26.923 24.64 0.00 35.25 2.69
2228 5887 9.837525 TTTGATTGGAAAAAGTTCACAAATTTG 57.162 25.926 16.67 16.67 35.25 2.32
2231 5890 9.447157 TCTTTTGATTGGAAAAAGTTCACAAAT 57.553 25.926 8.12 0.00 42.59 2.32
2232 5891 8.716909 GTCTTTTGATTGGAAAAAGTTCACAAA 58.283 29.630 8.12 0.00 42.59 2.83
2233 5892 8.093927 AGTCTTTTGATTGGAAAAAGTTCACAA 58.906 29.630 8.12 0.00 42.59 3.33
2234 5893 7.610865 AGTCTTTTGATTGGAAAAAGTTCACA 58.389 30.769 8.12 0.00 42.59 3.58
2235 5894 8.479313 AAGTCTTTTGATTGGAAAAAGTTCAC 57.521 30.769 8.12 1.39 42.59 3.18
2236 5895 9.500785 AAAAGTCTTTTGATTGGAAAAAGTTCA 57.499 25.926 9.80 0.00 42.59 3.18
2292 5951 5.278610 GGGCATTAGTGTTTCCGTAGTTTTT 60.279 40.000 0.00 0.00 0.00 1.94
2293 5952 4.216902 GGGCATTAGTGTTTCCGTAGTTTT 59.783 41.667 0.00 0.00 0.00 2.43
2294 5953 3.754850 GGGCATTAGTGTTTCCGTAGTTT 59.245 43.478 0.00 0.00 0.00 2.66
2295 5954 3.244630 TGGGCATTAGTGTTTCCGTAGTT 60.245 43.478 0.00 0.00 0.00 2.24
2296 5955 2.303600 TGGGCATTAGTGTTTCCGTAGT 59.696 45.455 0.00 0.00 0.00 2.73
2297 5956 2.676342 GTGGGCATTAGTGTTTCCGTAG 59.324 50.000 0.00 0.00 0.00 3.51
2298 5957 2.038689 TGTGGGCATTAGTGTTTCCGTA 59.961 45.455 0.00 0.00 0.00 4.02
2299 5958 1.202830 TGTGGGCATTAGTGTTTCCGT 60.203 47.619 0.00 0.00 0.00 4.69
2300 5959 1.199097 GTGTGGGCATTAGTGTTTCCG 59.801 52.381 0.00 0.00 0.00 4.30
2301 5960 1.199097 CGTGTGGGCATTAGTGTTTCC 59.801 52.381 0.00 0.00 0.00 3.13
2302 5961 1.877443 ACGTGTGGGCATTAGTGTTTC 59.123 47.619 0.00 0.00 0.00 2.78
2303 5962 1.606668 CACGTGTGGGCATTAGTGTTT 59.393 47.619 7.58 0.00 0.00 2.83
2304 5963 1.234821 CACGTGTGGGCATTAGTGTT 58.765 50.000 7.58 0.00 0.00 3.32
2305 5964 0.107831 ACACGTGTGGGCATTAGTGT 59.892 50.000 22.71 0.00 36.51 3.55
2306 5965 0.516877 CACACGTGTGGGCATTAGTG 59.483 55.000 35.65 10.67 42.10 2.74
2307 5966 2.927004 CACACGTGTGGGCATTAGT 58.073 52.632 35.65 1.12 42.10 2.24
2316 5975 1.503818 GGCTAACACCCACACGTGTG 61.504 60.000 36.13 36.13 46.19 3.82
2318 5977 0.816018 TTGGCTAACACCCACACGTG 60.816 55.000 15.48 15.48 39.75 4.49
2319 5978 0.816421 GTTGGCTAACACCCACACGT 60.816 55.000 8.23 0.00 36.78 4.49
2320 5979 0.534203 AGTTGGCTAACACCCACACG 60.534 55.000 15.86 0.00 39.30 4.49
2321 5980 1.235724 GAGTTGGCTAACACCCACAC 58.764 55.000 15.86 0.00 39.30 3.82
2322 5981 0.840617 TGAGTTGGCTAACACCCACA 59.159 50.000 15.86 4.54 39.30 4.17
2323 5982 1.235724 GTGAGTTGGCTAACACCCAC 58.764 55.000 15.86 14.67 39.30 4.61
2324 5983 0.109723 GGTGAGTTGGCTAACACCCA 59.890 55.000 15.86 7.11 44.59 4.51
2325 5984 2.942641 GGTGAGTTGGCTAACACCC 58.057 57.895 15.86 8.60 44.59 4.61
2327 5986 1.235724 GTGGGTGAGTTGGCTAACAC 58.764 55.000 15.86 9.59 39.30 3.32
2328 5987 0.840617 TGTGGGTGAGTTGGCTAACA 59.159 50.000 15.86 0.00 39.30 2.41
2329 5988 1.235724 GTGTGGGTGAGTTGGCTAAC 58.764 55.000 4.51 4.51 37.06 2.34
2330 5989 0.250124 CGTGTGGGTGAGTTGGCTAA 60.250 55.000 0.00 0.00 0.00 3.09
2331 5990 1.369692 CGTGTGGGTGAGTTGGCTA 59.630 57.895 0.00 0.00 0.00 3.93
2332 5991 2.111043 CGTGTGGGTGAGTTGGCT 59.889 61.111 0.00 0.00 0.00 4.75
2333 5992 3.660111 GCGTGTGGGTGAGTTGGC 61.660 66.667 0.00 0.00 0.00 4.52
2334 5993 2.978010 GGCGTGTGGGTGAGTTGG 60.978 66.667 0.00 0.00 0.00 3.77
2335 5994 1.961277 GAGGCGTGTGGGTGAGTTG 60.961 63.158 0.00 0.00 0.00 3.16
2336 5995 2.426023 GAGGCGTGTGGGTGAGTT 59.574 61.111 0.00 0.00 0.00 3.01
2337 5996 3.626924 GGAGGCGTGTGGGTGAGT 61.627 66.667 0.00 0.00 0.00 3.41
2338 5997 2.859273 GATGGAGGCGTGTGGGTGAG 62.859 65.000 0.00 0.00 0.00 3.51
2339 5998 2.927856 ATGGAGGCGTGTGGGTGA 60.928 61.111 0.00 0.00 0.00 4.02
2340 5999 2.436646 GATGGAGGCGTGTGGGTG 60.437 66.667 0.00 0.00 0.00 4.61
2341 6000 4.082523 CGATGGAGGCGTGTGGGT 62.083 66.667 0.00 0.00 0.00 4.51
2349 6008 4.899239 CTGGACGGCGATGGAGGC 62.899 72.222 16.62 0.00 0.00 4.70
2350 6009 1.672854 TTACTGGACGGCGATGGAGG 61.673 60.000 16.62 0.64 0.00 4.30
2351 6010 0.527817 GTTACTGGACGGCGATGGAG 60.528 60.000 16.62 6.16 0.00 3.86
2352 6011 0.968901 AGTTACTGGACGGCGATGGA 60.969 55.000 16.62 0.00 0.00 3.41
2353 6012 0.108329 AAGTTACTGGACGGCGATGG 60.108 55.000 16.62 2.98 0.00 3.51
2354 6013 1.135083 AGAAGTTACTGGACGGCGATG 60.135 52.381 16.62 2.57 0.00 3.84
2355 6014 1.135083 CAGAAGTTACTGGACGGCGAT 60.135 52.381 16.62 0.00 34.64 4.58
2356 6015 0.242825 CAGAAGTTACTGGACGGCGA 59.757 55.000 16.62 0.00 34.64 5.54
2357 6016 1.352156 GCAGAAGTTACTGGACGGCG 61.352 60.000 4.80 4.80 38.22 6.46
2358 6017 0.320421 TGCAGAAGTTACTGGACGGC 60.320 55.000 0.00 0.00 38.22 5.68
2359 6018 2.002586 CATGCAGAAGTTACTGGACGG 58.997 52.381 0.00 0.00 40.64 4.79
2360 6019 2.959516 TCATGCAGAAGTTACTGGACG 58.040 47.619 0.00 0.00 40.64 4.79
2361 6020 5.181748 AGATTCATGCAGAAGTTACTGGAC 58.818 41.667 0.00 0.00 40.64 4.02
2362 6021 5.426689 AGATTCATGCAGAAGTTACTGGA 57.573 39.130 0.00 0.00 40.15 3.86
2363 6022 5.163683 CCAAGATTCATGCAGAAGTTACTGG 60.164 44.000 0.00 0.00 40.15 4.00
2364 6023 5.675575 GCCAAGATTCATGCAGAAGTTACTG 60.676 44.000 0.00 0.00 40.15 2.74
2365 6024 4.397417 GCCAAGATTCATGCAGAAGTTACT 59.603 41.667 0.00 0.00 40.15 2.24
2366 6025 4.156556 TGCCAAGATTCATGCAGAAGTTAC 59.843 41.667 0.00 0.00 40.15 2.50
2367 6026 4.334552 TGCCAAGATTCATGCAGAAGTTA 58.665 39.130 0.00 0.00 40.15 2.24
2368 6027 3.159472 TGCCAAGATTCATGCAGAAGTT 58.841 40.909 0.00 0.00 40.15 2.66
2369 6028 2.799017 TGCCAAGATTCATGCAGAAGT 58.201 42.857 0.00 0.00 40.15 3.01
2374 6033 2.219080 TTCCTGCCAAGATTCATGCA 57.781 45.000 0.00 0.00 0.00 3.96
2375 6034 3.454375 CAATTCCTGCCAAGATTCATGC 58.546 45.455 0.00 0.00 0.00 4.06
2376 6035 3.740141 GCCAATTCCTGCCAAGATTCATG 60.740 47.826 0.00 0.00 0.00 3.07
2377 6036 2.433239 GCCAATTCCTGCCAAGATTCAT 59.567 45.455 0.00 0.00 0.00 2.57
2378 6037 1.826720 GCCAATTCCTGCCAAGATTCA 59.173 47.619 0.00 0.00 0.00 2.57
2379 6038 2.105766 AGCCAATTCCTGCCAAGATTC 58.894 47.619 0.00 0.00 0.00 2.52
2380 6039 1.829222 CAGCCAATTCCTGCCAAGATT 59.171 47.619 0.00 0.00 0.00 2.40
2381 6040 1.006281 TCAGCCAATTCCTGCCAAGAT 59.994 47.619 0.00 0.00 0.00 2.40
2382 6041 0.405198 TCAGCCAATTCCTGCCAAGA 59.595 50.000 0.00 0.00 0.00 3.02
2383 6042 1.481871 ATCAGCCAATTCCTGCCAAG 58.518 50.000 0.00 0.00 0.00 3.61
2384 6043 1.941377 AATCAGCCAATTCCTGCCAA 58.059 45.000 0.00 0.00 0.00 4.52
2385 6044 1.941377 AAATCAGCCAATTCCTGCCA 58.059 45.000 0.00 0.00 0.00 4.92
2386 6045 2.234414 TCAAAATCAGCCAATTCCTGCC 59.766 45.455 0.00 0.00 0.00 4.85
2387 6046 3.598019 TCAAAATCAGCCAATTCCTGC 57.402 42.857 0.00 0.00 0.00 4.85
2388 6047 5.484715 ACAATCAAAATCAGCCAATTCCTG 58.515 37.500 0.00 0.00 0.00 3.86
2389 6048 5.246656 TGACAATCAAAATCAGCCAATTCCT 59.753 36.000 0.00 0.00 0.00 3.36
2390 6049 5.349543 GTGACAATCAAAATCAGCCAATTCC 59.650 40.000 0.00 0.00 0.00 3.01
2391 6050 5.061311 CGTGACAATCAAAATCAGCCAATTC 59.939 40.000 0.00 0.00 0.00 2.17
2392 6051 4.925054 CGTGACAATCAAAATCAGCCAATT 59.075 37.500 0.00 0.00 0.00 2.32
2393 6052 4.022068 ACGTGACAATCAAAATCAGCCAAT 60.022 37.500 0.00 0.00 0.00 3.16
2394 6053 3.317711 ACGTGACAATCAAAATCAGCCAA 59.682 39.130 0.00 0.00 0.00 4.52
2395 6054 2.884012 ACGTGACAATCAAAATCAGCCA 59.116 40.909 0.00 0.00 0.00 4.75
2396 6055 3.559238 ACGTGACAATCAAAATCAGCC 57.441 42.857 0.00 0.00 0.00 4.85
2397 6056 4.391830 TCCTACGTGACAATCAAAATCAGC 59.608 41.667 0.00 0.00 0.00 4.26
2398 6057 5.408299 TGTCCTACGTGACAATCAAAATCAG 59.592 40.000 6.27 0.00 42.06 2.90
2399 6058 5.301555 TGTCCTACGTGACAATCAAAATCA 58.698 37.500 6.27 0.00 42.06 2.57
2400 6059 5.856126 TGTCCTACGTGACAATCAAAATC 57.144 39.130 6.27 0.00 42.06 2.17
2409 6068 1.705256 GCGAATTGTCCTACGTGACA 58.295 50.000 4.71 4.71 43.26 3.58
2410 6069 0.638746 CGCGAATTGTCCTACGTGAC 59.361 55.000 0.00 0.00 38.28 3.67
2411 6070 0.241749 ACGCGAATTGTCCTACGTGA 59.758 50.000 15.93 0.00 39.11 4.35
2412 6071 0.365523 CACGCGAATTGTCCTACGTG 59.634 55.000 15.93 0.00 43.83 4.49
2413 6072 0.038892 ACACGCGAATTGTCCTACGT 60.039 50.000 15.93 0.00 0.00 3.57
2414 6073 0.365523 CACACGCGAATTGTCCTACG 59.634 55.000 15.93 0.00 0.00 3.51
2415 6074 1.126113 CACACACGCGAATTGTCCTAC 59.874 52.381 15.93 0.00 0.00 3.18
2416 6075 1.424403 CACACACGCGAATTGTCCTA 58.576 50.000 15.93 0.00 0.00 2.94
2417 6076 1.227999 CCACACACGCGAATTGTCCT 61.228 55.000 15.93 0.00 0.00 3.85
2418 6077 1.206578 CCACACACGCGAATTGTCC 59.793 57.895 15.93 0.00 0.00 4.02
2419 6078 0.384230 CACCACACACGCGAATTGTC 60.384 55.000 15.93 0.00 0.00 3.18
2420 6079 1.092921 ACACCACACACGCGAATTGT 61.093 50.000 15.93 9.84 0.00 2.71
2421 6080 0.657077 CACACCACACACGCGAATTG 60.657 55.000 15.93 9.11 0.00 2.32
2422 6081 1.092921 ACACACCACACACGCGAATT 61.093 50.000 15.93 0.00 0.00 2.17
2423 6082 1.522806 ACACACCACACACGCGAAT 60.523 52.632 15.93 0.00 0.00 3.34
2424 6083 2.125472 ACACACCACACACGCGAA 60.125 55.556 15.93 0.00 0.00 4.70
2425 6084 2.888051 CACACACCACACACGCGA 60.888 61.111 15.93 0.00 0.00 5.87
2426 6085 2.870341 CTCACACACCACACACGCG 61.870 63.158 3.53 3.53 0.00 6.01
2427 6086 1.490693 CTCTCACACACCACACACGC 61.491 60.000 0.00 0.00 0.00 5.34
2428 6087 0.102300 TCTCTCACACACCACACACG 59.898 55.000 0.00 0.00 0.00 4.49
2429 6088 1.137086 ACTCTCTCACACACCACACAC 59.863 52.381 0.00 0.00 0.00 3.82
2430 6089 1.485124 ACTCTCTCACACACCACACA 58.515 50.000 0.00 0.00 0.00 3.72
2431 6090 2.474816 GAACTCTCTCACACACCACAC 58.525 52.381 0.00 0.00 0.00 3.82
2432 6091 1.067060 CGAACTCTCTCACACACCACA 59.933 52.381 0.00 0.00 0.00 4.17
2433 6092 1.772182 CGAACTCTCTCACACACCAC 58.228 55.000 0.00 0.00 0.00 4.16
2434 6093 0.032130 GCGAACTCTCTCACACACCA 59.968 55.000 0.00 0.00 0.00 4.17
2435 6094 0.667792 GGCGAACTCTCTCACACACC 60.668 60.000 0.00 0.00 0.00 4.16
2436 6095 0.667792 GGGCGAACTCTCTCACACAC 60.668 60.000 0.00 0.00 0.00 3.82
2437 6096 1.666011 GGGCGAACTCTCTCACACA 59.334 57.895 0.00 0.00 0.00 3.72
2438 6097 1.444553 CGGGCGAACTCTCTCACAC 60.445 63.158 0.00 0.00 0.00 3.82
2439 6098 2.962569 CGGGCGAACTCTCTCACA 59.037 61.111 0.00 0.00 0.00 3.58
2440 6099 2.507324 GCGGGCGAACTCTCTCAC 60.507 66.667 0.00 0.00 0.00 3.51
2441 6100 2.989253 TGCGGGCGAACTCTCTCA 60.989 61.111 0.00 0.00 0.00 3.27
2442 6101 2.507324 GTGCGGGCGAACTCTCTC 60.507 66.667 0.00 0.00 0.00 3.20
2443 6102 4.421479 CGTGCGGGCGAACTCTCT 62.421 66.667 0.00 0.00 0.00 3.10
2456 6115 3.119096 GAGAGGAAACCGGCGTGC 61.119 66.667 6.01 0.00 0.00 5.34
2457 6116 2.434359 GGAGAGGAAACCGGCGTG 60.434 66.667 6.01 0.00 0.00 5.34
2458 6117 4.065281 CGGAGAGGAAACCGGCGT 62.065 66.667 6.01 0.00 44.59 5.68
2475 6134 4.322385 GTGGCAACCGTTGACCGC 62.322 66.667 14.69 16.08 38.13 5.68
2476 6135 2.590575 AGTGGCAACCGTTGACCG 60.591 61.111 14.69 0.00 38.13 4.79
2477 6136 2.604174 CGAGTGGCAACCGTTGACC 61.604 63.158 14.69 14.49 38.13 4.02
2478 6137 2.604174 CCGAGTGGCAACCGTTGAC 61.604 63.158 15.63 13.09 39.85 3.18
2479 6138 2.280524 CCGAGTGGCAACCGTTGA 60.281 61.111 15.63 0.00 0.00 3.18
2480 6139 3.353836 CCCGAGTGGCAACCGTTG 61.354 66.667 6.91 6.91 0.00 4.10
2481 6140 4.636435 CCCCGAGTGGCAACCGTT 62.636 66.667 8.59 0.00 0.00 4.44
2554 6213 2.314122 GAAGTACGAGACGTGGTTGAC 58.686 52.381 0.00 0.00 41.39 3.18
2555 6214 1.069703 CGAAGTACGAGACGTGGTTGA 60.070 52.381 0.00 0.00 45.77 3.18
2556 6215 1.324718 CGAAGTACGAGACGTGGTTG 58.675 55.000 0.00 0.00 45.77 3.77
2557 6216 0.386478 GCGAAGTACGAGACGTGGTT 60.386 55.000 0.00 0.54 45.77 3.67
2558 6217 1.208614 GCGAAGTACGAGACGTGGT 59.791 57.895 0.00 0.00 45.77 4.16
2559 6218 1.513586 GGCGAAGTACGAGACGTGG 60.514 63.158 0.00 0.00 45.77 4.94
2560 6219 1.513586 GGGCGAAGTACGAGACGTG 60.514 63.158 0.00 0.00 45.77 4.49
2561 6220 2.694760 GGGGCGAAGTACGAGACGT 61.695 63.158 0.00 0.00 45.77 4.34
2562 6221 2.101770 GGGGCGAAGTACGAGACG 59.898 66.667 0.00 0.00 45.77 4.18
2563 6222 2.493501 GGGGGCGAAGTACGAGAC 59.506 66.667 0.00 0.00 45.77 3.36
2586 6245 0.921347 CGAGTAAATGGAACCGCGAG 59.079 55.000 8.23 0.00 0.00 5.03
2587 6246 1.079875 GCGAGTAAATGGAACCGCGA 61.080 55.000 8.23 0.00 33.42 5.87
2588 6247 1.082117 AGCGAGTAAATGGAACCGCG 61.082 55.000 0.00 0.00 46.11 6.46
2589 6248 0.651031 GAGCGAGTAAATGGAACCGC 59.349 55.000 0.00 0.00 42.52 5.68
2590 6249 1.287425 GGAGCGAGTAAATGGAACCG 58.713 55.000 0.00 0.00 0.00 4.44
2591 6250 2.007608 GTGGAGCGAGTAAATGGAACC 58.992 52.381 0.00 0.00 0.00 3.62
2592 6251 2.973945 AGTGGAGCGAGTAAATGGAAC 58.026 47.619 0.00 0.00 0.00 3.62
2593 6252 3.007506 TGAAGTGGAGCGAGTAAATGGAA 59.992 43.478 0.00 0.00 0.00 3.53
2594 6253 2.565391 TGAAGTGGAGCGAGTAAATGGA 59.435 45.455 0.00 0.00 0.00 3.41
2595 6254 2.972625 TGAAGTGGAGCGAGTAAATGG 58.027 47.619 0.00 0.00 0.00 3.16
2596 6255 5.812642 AGTAATGAAGTGGAGCGAGTAAATG 59.187 40.000 0.00 0.00 0.00 2.32
2597 6256 5.978814 AGTAATGAAGTGGAGCGAGTAAAT 58.021 37.500 0.00 0.00 0.00 1.40
2598 6257 5.047590 TGAGTAATGAAGTGGAGCGAGTAAA 60.048 40.000 0.00 0.00 0.00 2.01
2599 6258 4.461431 TGAGTAATGAAGTGGAGCGAGTAA 59.539 41.667 0.00 0.00 0.00 2.24
2600 6259 4.014406 TGAGTAATGAAGTGGAGCGAGTA 58.986 43.478 0.00 0.00 0.00 2.59
2601 6260 2.826128 TGAGTAATGAAGTGGAGCGAGT 59.174 45.455 0.00 0.00 0.00 4.18
2602 6261 3.182967 GTGAGTAATGAAGTGGAGCGAG 58.817 50.000 0.00 0.00 0.00 5.03
2603 6262 2.094182 GGTGAGTAATGAAGTGGAGCGA 60.094 50.000 0.00 0.00 0.00 4.93
2604 6263 2.271800 GGTGAGTAATGAAGTGGAGCG 58.728 52.381 0.00 0.00 0.00 5.03
2605 6264 2.027192 TGGGTGAGTAATGAAGTGGAGC 60.027 50.000 0.00 0.00 0.00 4.70
2606 6265 3.981071 TGGGTGAGTAATGAAGTGGAG 57.019 47.619 0.00 0.00 0.00 3.86
2607 6266 3.244770 GGTTGGGTGAGTAATGAAGTGGA 60.245 47.826 0.00 0.00 0.00 4.02
2608 6267 3.081804 GGTTGGGTGAGTAATGAAGTGG 58.918 50.000 0.00 0.00 0.00 4.00
2609 6268 3.081804 GGGTTGGGTGAGTAATGAAGTG 58.918 50.000 0.00 0.00 0.00 3.16
2610 6269 2.714250 TGGGTTGGGTGAGTAATGAAGT 59.286 45.455 0.00 0.00 0.00 3.01
2611 6270 3.081804 GTGGGTTGGGTGAGTAATGAAG 58.918 50.000 0.00 0.00 0.00 3.02
2612 6271 2.224917 GGTGGGTTGGGTGAGTAATGAA 60.225 50.000 0.00 0.00 0.00 2.57
2613 6272 1.353022 GGTGGGTTGGGTGAGTAATGA 59.647 52.381 0.00 0.00 0.00 2.57
2614 6273 1.074727 TGGTGGGTTGGGTGAGTAATG 59.925 52.381 0.00 0.00 0.00 1.90
2615 6274 1.451449 TGGTGGGTTGGGTGAGTAAT 58.549 50.000 0.00 0.00 0.00 1.89
2616 6275 1.353022 GATGGTGGGTTGGGTGAGTAA 59.647 52.381 0.00 0.00 0.00 2.24
2617 6276 0.988832 GATGGTGGGTTGGGTGAGTA 59.011 55.000 0.00 0.00 0.00 2.59
2618 6277 1.767692 GATGGTGGGTTGGGTGAGT 59.232 57.895 0.00 0.00 0.00 3.41
2619 6278 1.000896 GGATGGTGGGTTGGGTGAG 60.001 63.158 0.00 0.00 0.00 3.51
2620 6279 1.145900 ATGGATGGTGGGTTGGGTGA 61.146 55.000 0.00 0.00 0.00 4.02
2621 6280 0.628522 TATGGATGGTGGGTTGGGTG 59.371 55.000 0.00 0.00 0.00 4.61
2622 6281 0.926293 CTATGGATGGTGGGTTGGGT 59.074 55.000 0.00 0.00 0.00 4.51
2623 6282 0.468029 GCTATGGATGGTGGGTTGGG 60.468 60.000 0.00 0.00 0.00 4.12
2624 6283 0.258484 TGCTATGGATGGTGGGTTGG 59.742 55.000 0.00 0.00 0.00 3.77
2625 6284 1.064463 ACTGCTATGGATGGTGGGTTG 60.064 52.381 0.00 0.00 0.00 3.77
2626 6285 1.298953 ACTGCTATGGATGGTGGGTT 58.701 50.000 0.00 0.00 0.00 4.11
2627 6286 1.212935 GAACTGCTATGGATGGTGGGT 59.787 52.381 0.00 0.00 0.00 4.51
2628 6287 1.212688 TGAACTGCTATGGATGGTGGG 59.787 52.381 0.00 0.00 0.00 4.61
2629 6288 2.715749 TGAACTGCTATGGATGGTGG 57.284 50.000 0.00 0.00 0.00 4.61
2630 6289 4.201657 TGAATGAACTGCTATGGATGGTG 58.798 43.478 0.00 0.00 0.00 4.17
2631 6290 4.508551 TGAATGAACTGCTATGGATGGT 57.491 40.909 0.00 0.00 0.00 3.55
2632 6291 6.213677 CAATTGAATGAACTGCTATGGATGG 58.786 40.000 0.00 0.00 0.00 3.51
2633 6292 6.040054 TCCAATTGAATGAACTGCTATGGATG 59.960 38.462 7.12 0.00 0.00 3.51
2634 6293 6.131264 TCCAATTGAATGAACTGCTATGGAT 58.869 36.000 7.12 0.00 0.00 3.41
2635 6294 5.508567 TCCAATTGAATGAACTGCTATGGA 58.491 37.500 7.12 0.00 0.00 3.41
2636 6295 5.840243 TCCAATTGAATGAACTGCTATGG 57.160 39.130 7.12 0.00 0.00 2.74
2637 6296 7.066645 TCTCTTCCAATTGAATGAACTGCTATG 59.933 37.037 7.12 0.00 31.06 2.23
2638 6297 7.114754 TCTCTTCCAATTGAATGAACTGCTAT 58.885 34.615 7.12 0.00 31.06 2.97
2639 6298 6.475504 TCTCTTCCAATTGAATGAACTGCTA 58.524 36.000 7.12 0.00 31.06 3.49
2640 6299 5.319453 TCTCTTCCAATTGAATGAACTGCT 58.681 37.500 7.12 0.00 31.06 4.24
2641 6300 5.633830 TCTCTTCCAATTGAATGAACTGC 57.366 39.130 7.12 0.00 31.06 4.40
2642 6301 6.091437 GCTTCTCTTCCAATTGAATGAACTG 58.909 40.000 7.12 0.00 31.06 3.16
2643 6302 5.184671 GGCTTCTCTTCCAATTGAATGAACT 59.815 40.000 7.12 0.00 31.06 3.01
2644 6303 5.405797 GGCTTCTCTTCCAATTGAATGAAC 58.594 41.667 7.12 0.75 31.06 3.18
2645 6304 4.156556 CGGCTTCTCTTCCAATTGAATGAA 59.843 41.667 7.12 1.19 31.06 2.57
2646 6305 3.691118 CGGCTTCTCTTCCAATTGAATGA 59.309 43.478 7.12 0.00 31.06 2.57
2647 6306 3.691118 TCGGCTTCTCTTCCAATTGAATG 59.309 43.478 7.12 0.00 31.06 2.67
2648 6307 3.944015 CTCGGCTTCTCTTCCAATTGAAT 59.056 43.478 7.12 0.00 31.06 2.57
2649 6308 3.007940 TCTCGGCTTCTCTTCCAATTGAA 59.992 43.478 7.12 0.00 0.00 2.69
2650 6309 2.567169 TCTCGGCTTCTCTTCCAATTGA 59.433 45.455 7.12 0.00 0.00 2.57
2651 6310 2.935201 CTCTCGGCTTCTCTTCCAATTG 59.065 50.000 0.00 0.00 0.00 2.32
2652 6311 2.093235 CCTCTCGGCTTCTCTTCCAATT 60.093 50.000 0.00 0.00 0.00 2.32
2653 6312 1.484240 CCTCTCGGCTTCTCTTCCAAT 59.516 52.381 0.00 0.00 0.00 3.16
2654 6313 0.898320 CCTCTCGGCTTCTCTTCCAA 59.102 55.000 0.00 0.00 0.00 3.53
2655 6314 0.039764 TCCTCTCGGCTTCTCTTCCA 59.960 55.000 0.00 0.00 0.00 3.53
2656 6315 1.187087 TTCCTCTCGGCTTCTCTTCC 58.813 55.000 0.00 0.00 0.00 3.46
2657 6316 3.258228 CTTTTCCTCTCGGCTTCTCTTC 58.742 50.000 0.00 0.00 0.00 2.87
2658 6317 2.027653 CCTTTTCCTCTCGGCTTCTCTT 60.028 50.000 0.00 0.00 0.00 2.85
2659 6318 1.552792 CCTTTTCCTCTCGGCTTCTCT 59.447 52.381 0.00 0.00 0.00 3.10
2660 6319 2.009542 GCCTTTTCCTCTCGGCTTCTC 61.010 57.143 0.00 0.00 39.42 2.87
2661 6320 0.035915 GCCTTTTCCTCTCGGCTTCT 60.036 55.000 0.00 0.00 39.42 2.85
2662 6321 1.362406 CGCCTTTTCCTCTCGGCTTC 61.362 60.000 0.00 0.00 40.34 3.86
2663 6322 1.376037 CGCCTTTTCCTCTCGGCTT 60.376 57.895 0.00 0.00 40.34 4.35
2664 6323 2.266055 CGCCTTTTCCTCTCGGCT 59.734 61.111 0.00 0.00 40.34 5.52
2665 6324 2.820037 CCGCCTTTTCCTCTCGGC 60.820 66.667 0.00 0.00 39.14 5.54
2666 6325 2.820037 GCCGCCTTTTCCTCTCGG 60.820 66.667 0.00 0.00 42.68 4.63
2667 6326 3.188786 CGCCGCCTTTTCCTCTCG 61.189 66.667 0.00 0.00 0.00 4.04
2668 6327 2.820037 CCGCCGCCTTTTCCTCTC 60.820 66.667 0.00 0.00 0.00 3.20
2669 6328 3.316573 CTCCGCCGCCTTTTCCTCT 62.317 63.158 0.00 0.00 0.00 3.69
2670 6329 2.820037 CTCCGCCGCCTTTTCCTC 60.820 66.667 0.00 0.00 0.00 3.71
2671 6330 4.410400 CCTCCGCCGCCTTTTCCT 62.410 66.667 0.00 0.00 0.00 3.36
2681 6340 4.516195 GACTCTTCCGCCTCCGCC 62.516 72.222 0.00 0.00 0.00 6.13
2682 6341 4.856607 CGACTCTTCCGCCTCCGC 62.857 72.222 0.00 0.00 0.00 5.54
2683 6342 2.209064 TTTCGACTCTTCCGCCTCCG 62.209 60.000 0.00 0.00 0.00 4.63
2684 6343 0.458716 CTTTCGACTCTTCCGCCTCC 60.459 60.000 0.00 0.00 0.00 4.30
2685 6344 1.079317 GCTTTCGACTCTTCCGCCTC 61.079 60.000 0.00 0.00 0.00 4.70
2686 6345 1.079750 GCTTTCGACTCTTCCGCCT 60.080 57.895 0.00 0.00 0.00 5.52
2687 6346 0.741221 ATGCTTTCGACTCTTCCGCC 60.741 55.000 0.00 0.00 0.00 6.13
2688 6347 1.061276 GAATGCTTTCGACTCTTCCGC 59.939 52.381 0.00 0.00 0.00 5.54
2699 6358 3.718480 GACGGCCGCGAATGCTTTC 62.718 63.158 28.58 8.12 39.65 2.62
2700 6359 3.799755 GACGGCCGCGAATGCTTT 61.800 61.111 28.58 0.57 39.65 3.51
2730 6389 4.831307 CGAAGACGCTCCGGTCCG 62.831 72.222 3.60 3.60 37.66 4.79
2750 6409 4.838152 TCAATCTGCGGGCGCTCC 62.838 66.667 7.64 6.04 42.51 4.70
2751 6410 2.817423 CTTCAATCTGCGGGCGCTC 61.817 63.158 7.64 0.06 42.51 5.03
2752 6411 2.821366 CTTCAATCTGCGGGCGCT 60.821 61.111 7.64 0.00 42.51 5.92
2753 6412 3.880846 CCTTCAATCTGCGGGCGC 61.881 66.667 0.00 0.00 42.35 6.53
2754 6413 0.742990 TTACCTTCAATCTGCGGGCG 60.743 55.000 0.00 0.00 0.00 6.13
2755 6414 3.168773 TTACCTTCAATCTGCGGGC 57.831 52.632 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.