Multiple sequence alignment - TraesCS1D01G111100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G111100 chr1D 100.000 4451 0 0 1 4451 106325287 106320837 0.000000e+00 8220.0
1 TraesCS1D01G111100 chr1D 91.144 271 24 0 4181 4451 220360625 220360895 7.030000e-98 368.0
2 TraesCS1D01G111100 chr1D 90.775 271 25 0 4181 4451 156154630 156154360 3.270000e-96 363.0
3 TraesCS1D01G111100 chr1D 90.706 269 25 0 4181 4449 431953344 431953612 4.230000e-95 359.0
4 TraesCS1D01G111100 chr1A 92.376 2689 116 27 995 3650 107093879 107096511 0.000000e+00 3747.0
5 TraesCS1D01G111100 chr1A 97.778 45 1 0 3407 3451 564394479 564394523 1.330000e-10 78.7
6 TraesCS1D01G111100 chr1B 93.745 1263 56 10 1835 3079 160665367 160666624 0.000000e+00 1873.0
7 TraesCS1D01G111100 chr1B 93.742 831 37 8 1012 1835 160664426 160665248 0.000000e+00 1232.0
8 TraesCS1D01G111100 chr1B 92.164 855 66 1 142 996 643025805 643024952 0.000000e+00 1206.0
9 TraesCS1D01G111100 chr1B 92.417 844 61 3 153 996 94009974 94009134 0.000000e+00 1201.0
10 TraesCS1D01G111100 chr1B 90.526 475 22 8 3176 3650 160666964 160667415 1.370000e-169 606.0
11 TraesCS1D01G111100 chr1B 94.340 53 2 1 3403 3455 480766903 480766954 3.690000e-11 80.5
12 TraesCS1D01G111100 chr1B 92.308 52 4 0 3406 3457 476928442 476928391 1.720000e-09 75.0
13 TraesCS1D01G111100 chr2B 92.254 852 64 2 145 996 175453753 175454602 0.000000e+00 1206.0
14 TraesCS1D01G111100 chr2B 92.155 854 64 3 143 996 452911028 452910178 0.000000e+00 1203.0
15 TraesCS1D01G111100 chr3B 92.155 854 66 1 143 996 745557891 745557039 0.000000e+00 1205.0
16 TraesCS1D01G111100 chr3B 92.244 851 65 1 146 996 824304204 824305053 0.000000e+00 1205.0
17 TraesCS1D01G111100 chr3B 92.037 854 65 3 143 996 533444568 533445418 0.000000e+00 1197.0
18 TraesCS1D01G111100 chr7B 92.056 856 66 2 143 998 498598918 498599771 0.000000e+00 1203.0
19 TraesCS1D01G111100 chr7B 78.431 510 97 11 3650 4152 434158938 434159441 2.000000e-83 320.0
20 TraesCS1D01G111100 chr2D 91.870 861 62 6 144 999 590029333 590028476 0.000000e+00 1195.0
21 TraesCS1D01G111100 chr2D 72.956 477 121 7 3683 4155 433028846 433028374 4.610000e-35 159.0
22 TraesCS1D01G111100 chr2D 89.474 57 4 2 3416 3471 73496149 73496094 2.220000e-08 71.3
23 TraesCS1D01G111100 chr5A 81.838 1360 176 39 1117 2456 326721405 326720097 0.000000e+00 1077.0
24 TraesCS1D01G111100 chr5A 81.829 831 86 32 2569 3393 326719620 326718849 4.860000e-179 638.0
25 TraesCS1D01G111100 chr5A 93.220 59 4 0 1569 1627 313883887 313883945 2.210000e-13 87.9
26 TraesCS1D01G111100 chr5D 81.360 1368 158 40 1117 2456 230016623 230017921 0.000000e+00 1024.0
27 TraesCS1D01G111100 chr5D 84.569 836 86 24 2566 3393 230018361 230019161 0.000000e+00 789.0
28 TraesCS1D01G111100 chr4A 88.346 532 62 0 3649 4180 698911529 698910998 1.350000e-179 640.0
29 TraesCS1D01G111100 chr4A 91.513 271 23 0 4180 4450 628199607 628199337 1.510000e-99 374.0
30 TraesCS1D01G111100 chr6A 88.150 481 56 1 3701 4180 106462086 106462566 4.990000e-159 571.0
31 TraesCS1D01G111100 chr6A 94.340 53 2 1 3644 3696 106460288 106460339 3.690000e-11 80.5
32 TraesCS1D01G111100 chr7A 85.827 508 72 0 3644 4151 386943222 386943729 1.410000e-149 540.0
33 TraesCS1D01G111100 chr7A 84.554 505 68 4 3650 4154 450415148 450414654 4.000000e-135 492.0
34 TraesCS1D01G111100 chr3A 85.347 505 73 1 3650 4154 425246991 425246488 5.100000e-144 521.0
35 TraesCS1D01G111100 chr3A 91.525 59 3 1 3411 3469 733654786 733654730 3.690000e-11 80.5
36 TraesCS1D01G111100 chr5B 89.730 370 33 1 3811 4180 81171951 81172315 6.740000e-128 468.0
37 TraesCS1D01G111100 chr5B 94.915 59 2 1 1569 1627 263525553 263525610 1.700000e-14 91.6
38 TraesCS1D01G111100 chr4D 90.842 273 23 2 4180 4451 463458635 463458364 9.100000e-97 364.0
39 TraesCS1D01G111100 chr4D 90.441 272 25 1 4181 4451 107685335 107685606 1.520000e-94 357.0
40 TraesCS1D01G111100 chr3D 90.809 272 25 0 4180 4451 559039359 559039630 9.100000e-97 364.0
41 TraesCS1D01G111100 chr3D 90.441 272 26 0 4180 4451 25818261 25818532 4.230000e-95 359.0
42 TraesCS1D01G111100 chr6D 90.406 271 26 0 4181 4451 249433165 249432895 1.520000e-94 357.0
43 TraesCS1D01G111100 chr6D 95.918 49 2 0 3403 3451 460808279 460808327 3.690000e-11 80.5
44 TraesCS1D01G111100 chr6D 85.294 68 6 3 3409 3472 131992515 131992448 2.870000e-07 67.6
45 TraesCS1D01G111100 chr6B 92.593 54 2 2 3407 3460 42749448 42749499 4.770000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G111100 chr1D 106320837 106325287 4450 True 8220.00 8220 100.0000 1 4451 1 chr1D.!!$R1 4450
1 TraesCS1D01G111100 chr1A 107093879 107096511 2632 False 3747.00 3747 92.3760 995 3650 1 chr1A.!!$F1 2655
2 TraesCS1D01G111100 chr1B 160664426 160667415 2989 False 1237.00 1873 92.6710 1012 3650 3 chr1B.!!$F2 2638
3 TraesCS1D01G111100 chr1B 643024952 643025805 853 True 1206.00 1206 92.1640 142 996 1 chr1B.!!$R3 854
4 TraesCS1D01G111100 chr1B 94009134 94009974 840 True 1201.00 1201 92.4170 153 996 1 chr1B.!!$R1 843
5 TraesCS1D01G111100 chr2B 175453753 175454602 849 False 1206.00 1206 92.2540 145 996 1 chr2B.!!$F1 851
6 TraesCS1D01G111100 chr2B 452910178 452911028 850 True 1203.00 1203 92.1550 143 996 1 chr2B.!!$R1 853
7 TraesCS1D01G111100 chr3B 745557039 745557891 852 True 1205.00 1205 92.1550 143 996 1 chr3B.!!$R1 853
8 TraesCS1D01G111100 chr3B 824304204 824305053 849 False 1205.00 1205 92.2440 146 996 1 chr3B.!!$F2 850
9 TraesCS1D01G111100 chr3B 533444568 533445418 850 False 1197.00 1197 92.0370 143 996 1 chr3B.!!$F1 853
10 TraesCS1D01G111100 chr7B 498598918 498599771 853 False 1203.00 1203 92.0560 143 998 1 chr7B.!!$F2 855
11 TraesCS1D01G111100 chr7B 434158938 434159441 503 False 320.00 320 78.4310 3650 4152 1 chr7B.!!$F1 502
12 TraesCS1D01G111100 chr2D 590028476 590029333 857 True 1195.00 1195 91.8700 144 999 1 chr2D.!!$R3 855
13 TraesCS1D01G111100 chr5A 326718849 326721405 2556 True 857.50 1077 81.8335 1117 3393 2 chr5A.!!$R1 2276
14 TraesCS1D01G111100 chr5D 230016623 230019161 2538 False 906.50 1024 82.9645 1117 3393 2 chr5D.!!$F1 2276
15 TraesCS1D01G111100 chr4A 698910998 698911529 531 True 640.00 640 88.3460 3649 4180 1 chr4A.!!$R2 531
16 TraesCS1D01G111100 chr6A 106460288 106462566 2278 False 325.75 571 91.2450 3644 4180 2 chr6A.!!$F1 536
17 TraesCS1D01G111100 chr7A 386943222 386943729 507 False 540.00 540 85.8270 3644 4151 1 chr7A.!!$F1 507
18 TraesCS1D01G111100 chr3A 425246488 425246991 503 True 521.00 521 85.3470 3650 4154 1 chr3A.!!$R1 504

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
56 57 0.038526 ACACGGCTAAACTCGACCTG 60.039 55.0 0.0 0.0 0.00 4.00 F
57 58 0.242825 CACGGCTAAACTCGACCTGA 59.757 55.0 0.0 0.0 0.00 3.86 F
112 113 0.371645 CGCTCCTCTTTGTCAATCGC 59.628 55.0 0.0 0.0 0.00 4.58 F
130 131 0.455633 GCAGAAATCAACCGCAGCAG 60.456 55.0 0.0 0.0 0.00 4.24 F
2119 2270 0.175989 GGCAGGTCCTAGAGAAACCG 59.824 60.0 0.0 0.0 38.14 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1078 1083 0.698818 AGGGGCAAGAGATTTTCGGT 59.301 50.000 0.00 0.00 0.00 4.69 R
1085 1090 1.222936 CGAAGCAGGGGCAAGAGAT 59.777 57.895 0.00 0.00 44.61 2.75 R
2074 2225 0.618458 AAAGGCATCCGGTTCAGCTA 59.382 50.000 0.00 0.00 0.00 3.32 R
2235 2390 3.567397 TGAGAACCCTAGTAGGAGCATC 58.433 50.000 18.43 10.44 37.67 3.91 R
4182 7285 0.115944 TCCCATGCAATGTTCCCCAA 59.884 50.000 0.00 0.00 44.81 4.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.294138 TCCCAGCGTTTAAGACCGG 59.706 57.895 0.00 0.00 0.00 5.28
19 20 1.004200 CCCAGCGTTTAAGACCGGT 60.004 57.895 6.92 6.92 34.78 5.28
20 21 0.604511 CCCAGCGTTTAAGACCGGTT 60.605 55.000 9.42 0.00 31.64 4.44
21 22 1.232119 CCAGCGTTTAAGACCGGTTT 58.768 50.000 9.42 0.00 31.64 3.27
22 23 2.415776 CCAGCGTTTAAGACCGGTTTA 58.584 47.619 9.42 6.84 31.64 2.01
23 24 2.807392 CCAGCGTTTAAGACCGGTTTAA 59.193 45.455 9.42 12.68 31.64 1.52
24 25 3.120442 CCAGCGTTTAAGACCGGTTTAAG 60.120 47.826 9.42 6.39 31.64 1.85
25 26 3.069289 AGCGTTTAAGACCGGTTTAAGG 58.931 45.455 9.42 11.74 0.00 2.69
26 27 2.413239 GCGTTTAAGACCGGTTTAAGGC 60.413 50.000 9.42 16.60 0.00 4.35
27 28 2.159801 CGTTTAAGACCGGTTTAAGGCG 60.160 50.000 9.42 17.14 0.00 5.52
28 29 1.441738 TTAAGACCGGTTTAAGGCGC 58.558 50.000 9.42 0.00 0.00 6.53
29 30 0.391528 TAAGACCGGTTTAAGGCGCC 60.392 55.000 21.89 21.89 0.00 6.53
30 31 3.129502 GACCGGTTTAAGGCGCCC 61.130 66.667 26.15 7.01 0.00 6.13
51 52 0.989890 GCTGTACACGGCTAAACTCG 59.010 55.000 5.91 0.00 44.58 4.18
52 53 1.401931 GCTGTACACGGCTAAACTCGA 60.402 52.381 5.91 0.00 44.58 4.04
53 54 2.248487 CTGTACACGGCTAAACTCGAC 58.752 52.381 0.00 0.00 0.00 4.20
54 55 1.068333 TGTACACGGCTAAACTCGACC 60.068 52.381 0.00 0.00 0.00 4.79
55 56 1.200948 GTACACGGCTAAACTCGACCT 59.799 52.381 0.00 0.00 0.00 3.85
56 57 0.038526 ACACGGCTAAACTCGACCTG 60.039 55.000 0.00 0.00 0.00 4.00
57 58 0.242825 CACGGCTAAACTCGACCTGA 59.757 55.000 0.00 0.00 0.00 3.86
58 59 0.963962 ACGGCTAAACTCGACCTGAA 59.036 50.000 0.00 0.00 0.00 3.02
59 60 1.336609 ACGGCTAAACTCGACCTGAAC 60.337 52.381 0.00 0.00 0.00 3.18
60 61 1.336517 CGGCTAAACTCGACCTGAACA 60.337 52.381 0.00 0.00 0.00 3.18
61 62 2.067013 GGCTAAACTCGACCTGAACAC 58.933 52.381 0.00 0.00 0.00 3.32
62 63 2.547218 GGCTAAACTCGACCTGAACACA 60.547 50.000 0.00 0.00 0.00 3.72
63 64 2.731976 GCTAAACTCGACCTGAACACAG 59.268 50.000 0.00 0.00 0.00 3.66
71 72 3.713902 CCTGAACACAGGCTGTCTT 57.286 52.632 19.13 13.22 43.51 3.01
72 73 2.839486 CCTGAACACAGGCTGTCTTA 57.161 50.000 19.13 3.86 43.51 2.10
73 74 3.340814 CCTGAACACAGGCTGTCTTAT 57.659 47.619 19.13 3.81 43.51 1.73
74 75 3.679389 CCTGAACACAGGCTGTCTTATT 58.321 45.455 19.13 9.82 43.51 1.40
75 76 4.074970 CCTGAACACAGGCTGTCTTATTT 58.925 43.478 19.13 5.95 43.51 1.40
76 77 4.083110 CCTGAACACAGGCTGTCTTATTTG 60.083 45.833 19.13 7.35 43.51 2.32
77 78 3.253188 TGAACACAGGCTGTCTTATTTGC 59.747 43.478 19.13 0.71 30.29 3.68
78 79 2.162681 ACACAGGCTGTCTTATTTGCC 58.837 47.619 19.13 0.00 45.21 4.52
81 82 3.996825 GGCTGTCTTATTTGCCGTG 57.003 52.632 0.00 0.00 35.79 4.94
82 83 1.448985 GGCTGTCTTATTTGCCGTGA 58.551 50.000 0.00 0.00 35.79 4.35
83 84 1.810151 GGCTGTCTTATTTGCCGTGAA 59.190 47.619 0.00 0.00 35.79 3.18
84 85 2.414161 GGCTGTCTTATTTGCCGTGAAC 60.414 50.000 0.00 0.00 35.79 3.18
85 86 2.414161 GCTGTCTTATTTGCCGTGAACC 60.414 50.000 0.00 0.00 0.00 3.62
86 87 1.801771 TGTCTTATTTGCCGTGAACCG 59.198 47.619 0.00 0.00 0.00 4.44
87 88 0.800012 TCTTATTTGCCGTGAACCGC 59.200 50.000 0.00 0.00 34.38 5.68
88 89 0.519519 CTTATTTGCCGTGAACCGCA 59.480 50.000 0.00 0.00 34.38 5.69
89 90 1.132262 CTTATTTGCCGTGAACCGCAT 59.868 47.619 0.00 0.00 34.38 4.73
90 91 0.449786 TATTTGCCGTGAACCGCATG 59.550 50.000 0.00 0.00 34.38 4.06
91 92 1.523154 ATTTGCCGTGAACCGCATGT 61.523 50.000 0.00 0.00 34.38 3.21
92 93 0.885150 TTTGCCGTGAACCGCATGTA 60.885 50.000 0.00 0.00 34.38 2.29
93 94 1.570347 TTGCCGTGAACCGCATGTAC 61.570 55.000 0.00 0.00 34.38 2.90
94 95 3.077705 CCGTGAACCGCATGTACG 58.922 61.111 0.00 0.00 34.38 3.67
95 96 2.394136 CGTGAACCGCATGTACGC 59.606 61.111 0.00 0.00 0.00 4.42
96 97 2.092291 CGTGAACCGCATGTACGCT 61.092 57.895 0.00 0.00 0.00 5.07
97 98 1.708027 GTGAACCGCATGTACGCTC 59.292 57.895 0.00 0.00 0.00 5.03
98 99 1.447140 TGAACCGCATGTACGCTCC 60.447 57.895 0.00 0.00 0.00 4.70
99 100 1.153628 GAACCGCATGTACGCTCCT 60.154 57.895 0.00 0.00 0.00 3.69
100 101 1.146358 GAACCGCATGTACGCTCCTC 61.146 60.000 0.00 0.00 0.00 3.71
101 102 1.605058 AACCGCATGTACGCTCCTCT 61.605 55.000 0.00 0.00 0.00 3.69
102 103 1.141881 CCGCATGTACGCTCCTCTT 59.858 57.895 0.00 0.00 0.00 2.85
103 104 0.460284 CCGCATGTACGCTCCTCTTT 60.460 55.000 0.00 0.00 0.00 2.52
104 105 0.647410 CGCATGTACGCTCCTCTTTG 59.353 55.000 0.00 0.00 0.00 2.77
105 106 1.726853 GCATGTACGCTCCTCTTTGT 58.273 50.000 0.00 0.00 0.00 2.83
106 107 1.661112 GCATGTACGCTCCTCTTTGTC 59.339 52.381 0.00 0.00 0.00 3.18
107 108 2.930887 GCATGTACGCTCCTCTTTGTCA 60.931 50.000 0.00 0.00 0.00 3.58
108 109 3.325870 CATGTACGCTCCTCTTTGTCAA 58.674 45.455 0.00 0.00 0.00 3.18
109 110 3.678056 TGTACGCTCCTCTTTGTCAAT 57.322 42.857 0.00 0.00 0.00 2.57
110 111 3.585862 TGTACGCTCCTCTTTGTCAATC 58.414 45.455 0.00 0.00 0.00 2.67
111 112 1.714794 ACGCTCCTCTTTGTCAATCG 58.285 50.000 0.00 0.00 0.00 3.34
112 113 0.371645 CGCTCCTCTTTGTCAATCGC 59.628 55.000 0.00 0.00 0.00 4.58
113 114 1.442769 GCTCCTCTTTGTCAATCGCA 58.557 50.000 0.00 0.00 0.00 5.10
114 115 1.396301 GCTCCTCTTTGTCAATCGCAG 59.604 52.381 0.00 0.00 0.00 5.18
115 116 2.932622 GCTCCTCTTTGTCAATCGCAGA 60.933 50.000 0.00 0.00 45.75 4.26
116 117 3.329386 CTCCTCTTTGTCAATCGCAGAA 58.671 45.455 0.00 0.00 43.58 3.02
117 118 3.738982 TCCTCTTTGTCAATCGCAGAAA 58.261 40.909 0.00 0.00 43.58 2.52
118 119 4.326826 TCCTCTTTGTCAATCGCAGAAAT 58.673 39.130 0.00 0.00 43.58 2.17
119 120 4.393062 TCCTCTTTGTCAATCGCAGAAATC 59.607 41.667 0.00 0.00 43.58 2.17
120 121 4.154737 CCTCTTTGTCAATCGCAGAAATCA 59.845 41.667 0.00 0.00 43.58 2.57
121 122 5.335113 CCTCTTTGTCAATCGCAGAAATCAA 60.335 40.000 0.00 0.00 43.58 2.57
122 123 5.451908 TCTTTGTCAATCGCAGAAATCAAC 58.548 37.500 0.00 0.00 43.58 3.18
123 124 3.829886 TGTCAATCGCAGAAATCAACC 57.170 42.857 0.00 0.00 43.58 3.77
124 125 2.159430 TGTCAATCGCAGAAATCAACCG 59.841 45.455 0.00 0.00 43.58 4.44
125 126 1.130373 TCAATCGCAGAAATCAACCGC 59.870 47.619 0.00 0.00 43.58 5.68
126 127 1.135717 CAATCGCAGAAATCAACCGCA 60.136 47.619 0.00 0.00 43.58 5.69
127 128 0.729116 ATCGCAGAAATCAACCGCAG 59.271 50.000 0.00 0.00 43.58 5.18
128 129 1.512734 CGCAGAAATCAACCGCAGC 60.513 57.895 0.00 0.00 0.00 5.25
129 130 1.580942 GCAGAAATCAACCGCAGCA 59.419 52.632 0.00 0.00 0.00 4.41
130 131 0.455633 GCAGAAATCAACCGCAGCAG 60.456 55.000 0.00 0.00 0.00 4.24
131 132 0.877071 CAGAAATCAACCGCAGCAGT 59.123 50.000 0.00 0.00 0.00 4.40
132 133 0.877071 AGAAATCAACCGCAGCAGTG 59.123 50.000 0.00 0.00 0.00 3.66
133 134 0.874390 GAAATCAACCGCAGCAGTGA 59.126 50.000 0.00 0.00 0.00 3.41
134 135 1.266718 GAAATCAACCGCAGCAGTGAA 59.733 47.619 0.00 0.00 0.00 3.18
135 136 1.317613 AATCAACCGCAGCAGTGAAA 58.682 45.000 0.00 0.00 0.00 2.69
136 137 1.538047 ATCAACCGCAGCAGTGAAAT 58.462 45.000 0.00 0.00 0.00 2.17
137 138 2.177394 TCAACCGCAGCAGTGAAATA 57.823 45.000 0.00 0.00 0.00 1.40
138 139 2.710377 TCAACCGCAGCAGTGAAATAT 58.290 42.857 0.00 0.00 0.00 1.28
139 140 3.867857 TCAACCGCAGCAGTGAAATATA 58.132 40.909 0.00 0.00 0.00 0.86
140 141 4.450976 TCAACCGCAGCAGTGAAATATAT 58.549 39.130 0.00 0.00 0.00 0.86
309 314 6.372659 TCGTTTTTACTCATCCGTAGTCTAGT 59.627 38.462 0.00 0.00 0.00 2.57
449 454 3.144506 CAGTCTGTTCAAGCAAGGATGT 58.855 45.455 0.00 0.00 0.00 3.06
593 598 2.262211 TGCATCGACGACATCTGAAAG 58.738 47.619 0.00 0.00 0.00 2.62
596 601 3.511699 CATCGACGACATCTGAAAGGAA 58.488 45.455 0.00 0.00 0.00 3.36
625 630 3.220999 CTGGGCTCGTGGTTCGTGA 62.221 63.158 0.00 0.00 40.80 4.35
635 640 0.888736 TGGTTCGTGAATGGCAGGTG 60.889 55.000 0.00 0.00 34.14 4.00
637 642 1.609580 GGTTCGTGAATGGCAGGTGTA 60.610 52.381 0.00 0.00 34.14 2.90
653 658 1.001633 GTGTAGTTTCCTCCTTCGGCA 59.998 52.381 0.00 0.00 0.00 5.69
654 659 1.001633 TGTAGTTTCCTCCTTCGGCAC 59.998 52.381 0.00 0.00 0.00 5.01
722 727 0.893727 GTGTTGCCCCGGTCTGATTT 60.894 55.000 0.00 0.00 0.00 2.17
730 735 2.226330 CCCGGTCTGATTTGTTCAACA 58.774 47.619 0.00 0.00 32.78 3.33
838 843 6.438763 GTGGTGATTCGTCATTCTTTTCTTT 58.561 36.000 0.00 0.00 0.00 2.52
903 908 4.081972 GGTGTCAAGCTCAGAGATGTTCTA 60.082 45.833 0.00 0.00 33.83 2.10
949 954 7.188157 TGTTGGTTTTTACGTGATTTGTACTC 58.812 34.615 0.00 0.00 0.00 2.59
985 990 8.417884 TGATATGAATGAGACACGTATTACCAA 58.582 33.333 0.00 0.00 0.00 3.67
986 991 9.424319 GATATGAATGAGACACGTATTACCAAT 57.576 33.333 0.00 0.00 0.00 3.16
987 992 9.778741 ATATGAATGAGACACGTATTACCAATT 57.221 29.630 0.00 0.00 0.00 2.32
1010 1015 0.814457 AAAAACCGCAGCAGTGAACA 59.186 45.000 0.00 0.00 0.00 3.18
1021 1026 1.271379 GCAGTGAACAGGAAGCCCTAA 60.271 52.381 0.00 0.00 42.02 2.69
1024 1029 2.160205 GTGAACAGGAAGCCCTAAACC 58.840 52.381 0.00 0.00 42.02 3.27
1033 1038 1.198759 AGCCCTAAACCGAGCCAGAA 61.199 55.000 0.00 0.00 0.00 3.02
1100 1105 1.844687 GAAAATCTCTTGCCCCTGCT 58.155 50.000 0.00 0.00 38.71 4.24
1113 1118 4.809496 CTGCTTCGCCCTGCCCAT 62.809 66.667 0.00 0.00 0.00 4.00
1239 1251 3.743017 GCCATCAGCCCTCCCCAA 61.743 66.667 0.00 0.00 34.35 4.12
1342 1354 4.660938 GGCCGGCAAGTCCAAGGT 62.661 66.667 30.85 0.00 34.01 3.50
1492 1504 6.758416 GCCTTCTTCTGTTTTCTGAATTGTTT 59.242 34.615 0.00 0.00 37.20 2.83
1522 1544 9.781834 CTTTTCTGTTTATATTTTCGCCATACA 57.218 29.630 0.00 0.00 0.00 2.29
1623 1645 3.698040 CCATGACCAATTCTCTCTTTGGG 59.302 47.826 6.64 0.00 45.45 4.12
1668 1691 7.254932 GGAATTATGTAGAACAGAATGCAGTCC 60.255 40.741 11.14 4.60 38.89 3.85
1676 1699 2.823747 ACAGAATGCAGTCCGTGTAGTA 59.176 45.455 11.14 0.00 42.53 1.82
1677 1700 3.119459 ACAGAATGCAGTCCGTGTAGTAG 60.119 47.826 11.14 0.00 42.53 2.57
1678 1701 3.090037 AGAATGCAGTCCGTGTAGTAGT 58.910 45.455 11.14 0.00 0.00 2.73
1752 1775 0.887387 GGTAGCAAACAAGGCGTGGA 60.887 55.000 5.22 0.00 36.08 4.02
1875 2022 9.605275 TGTTTATCAATGATTTTTGGTTGTTGA 57.395 25.926 0.00 0.00 0.00 3.18
1910 2057 1.337703 TGCAATCAGACAACAGCCAAC 59.662 47.619 0.00 0.00 0.00 3.77
1930 2077 1.468520 CCCCTAACAAGTGTCAATGCG 59.531 52.381 0.00 0.00 0.00 4.73
2074 2225 1.606531 GCCTCTCATGTTCAGGGCT 59.393 57.895 8.74 0.00 36.96 5.19
2119 2270 0.175989 GGCAGGTCCTAGAGAAACCG 59.824 60.000 0.00 0.00 38.14 4.44
2168 2320 2.814336 GCCTCTCATTTCTTTTCGGTGT 59.186 45.455 0.00 0.00 0.00 4.16
2189 2341 1.149174 CTGTGTGGACAGCCTGGTT 59.851 57.895 0.00 0.00 43.24 3.67
2235 2390 6.910972 TCACTCTTCGCATAGTAAATAAGTCG 59.089 38.462 0.00 0.00 0.00 4.18
2251 2406 1.495574 AGTCGATGCTCCTACTAGGGT 59.504 52.381 2.04 0.00 35.59 4.34
2263 2418 6.352308 GCTCCTACTAGGGTTCTCAAAAAGAT 60.352 42.308 2.04 0.00 35.59 2.40
2292 2463 7.611770 AGAAACATGCTATTCCCCTTTTAAAC 58.388 34.615 0.00 0.00 0.00 2.01
2327 2498 3.119245 GGACTTACGATGCAACTGACCTA 60.119 47.826 0.00 0.00 0.00 3.08
2328 2499 4.441634 GGACTTACGATGCAACTGACCTAT 60.442 45.833 0.00 0.00 0.00 2.57
2378 2552 3.879998 TCCAGAAACAGTTGCACTTGTA 58.120 40.909 2.93 0.00 0.00 2.41
2393 2567 4.319766 GCACTTGTAGAGGACATTGTTGTG 60.320 45.833 0.00 0.00 38.07 3.33
2509 3148 3.515602 AAGGTCTTGTTGAGGATTGCT 57.484 42.857 0.00 0.00 0.00 3.91
2515 3154 2.957402 TGTTGAGGATTGCTTGACCT 57.043 45.000 0.00 0.00 36.68 3.85
2516 3155 2.507484 TGTTGAGGATTGCTTGACCTG 58.493 47.619 0.00 0.00 33.89 4.00
2619 3689 2.107031 TGAGGATAGCATGACCCATTGG 59.893 50.000 0.00 0.00 37.80 3.16
2668 3738 7.838884 AGTCCATTAAGTACACTTAGGAAGTC 58.161 38.462 10.21 2.18 40.46 3.01
2675 3745 3.771577 ACACTTAGGAAGTCTTGGGTG 57.228 47.619 0.00 0.00 40.46 4.61
2761 3831 1.914051 CGACATCTTGCACTGTACGAG 59.086 52.381 0.00 0.00 0.00 4.18
2835 3906 2.173782 TCTACCTGCCACAACCTTCAAA 59.826 45.455 0.00 0.00 0.00 2.69
2850 3921 5.240121 ACCTTCAAAACAATCCATTCATGC 58.760 37.500 0.00 0.00 0.00 4.06
2867 3938 4.346730 TCATGCTGAACCAAGAAATCCAT 58.653 39.130 0.00 0.00 0.00 3.41
2906 3979 3.004315 ACCAGTTATGCCAGTTTGTTTCG 59.996 43.478 0.00 0.00 0.00 3.46
2938 4011 8.770438 TGGCTGTTTATAATTCCATTGTTTTC 57.230 30.769 0.00 0.00 0.00 2.29
3091 4169 4.820775 AGGTATGGTCTGGACTACATGAT 58.179 43.478 0.00 0.00 0.00 2.45
3130 4210 2.499693 TCACTTGTGTCACCAGAGTTCA 59.500 45.455 10.88 0.00 0.00 3.18
3157 4237 4.835199 GCTAAGCATTTGCATTTCACTG 57.165 40.909 5.20 0.00 46.06 3.66
3306 4661 2.806856 GCGTCCTTGAGCAGCATCG 61.807 63.158 0.00 0.00 0.00 3.84
3333 4688 9.277783 GAGACTACCATGTTATCTGCAATATTT 57.722 33.333 0.00 0.00 0.00 1.40
3350 4706 6.371548 GCAATATTTCACTAACTGGTCAGACA 59.628 38.462 2.17 0.00 0.00 3.41
3414 4771 9.938280 TTTGTATATGGAGTACTATTACCATGC 57.062 33.333 19.31 11.91 42.16 4.06
3419 4776 4.202080 TGGAGTACTATTACCATGCGACAC 60.202 45.833 0.00 0.00 0.00 3.67
3420 4777 4.202080 GGAGTACTATTACCATGCGACACA 60.202 45.833 0.00 0.00 0.00 3.72
3421 4778 5.509163 GGAGTACTATTACCATGCGACACAT 60.509 44.000 0.00 0.00 40.66 3.21
3527 4887 2.646930 TCCACTGTGATGAATGGATGC 58.353 47.619 9.86 0.00 36.30 3.91
3563 4923 6.538742 TGCTCAGTCATACTAGGCATAAAAAC 59.461 38.462 0.00 0.00 32.71 2.43
3566 4926 7.630082 TCAGTCATACTAGGCATAAAAACCTT 58.370 34.615 0.00 0.00 37.50 3.50
3644 5004 1.819928 TGCGCACATTACAATCAGGT 58.180 45.000 5.66 0.00 0.00 4.00
3663 5023 0.322322 TACGTTGGGAATGGCTTCGT 59.678 50.000 0.00 0.00 31.75 3.85
3805 6906 4.324874 GGAAGGATAGATGGATTCATGGGG 60.325 50.000 0.00 0.00 32.98 4.96
3844 6945 4.757149 TCGCTTCGATGATCTTAGAGATGA 59.243 41.667 1.89 0.00 34.53 2.92
3897 6998 2.238646 TCGACAGGCTTTGGTGGATAAT 59.761 45.455 0.00 0.00 0.00 1.28
3933 7035 3.554934 TGTGCAAGGTGACATCTCTTTT 58.445 40.909 0.00 0.00 0.00 2.27
3934 7036 3.953612 TGTGCAAGGTGACATCTCTTTTT 59.046 39.130 0.00 0.00 0.00 1.94
4001 7103 0.033920 CCGCGGGATGATCATCTTCA 59.966 55.000 29.85 0.00 37.92 3.02
4028 7130 0.321919 TTTAGCTGGCCTGCTGACAG 60.322 55.000 38.75 13.26 43.87 3.51
4051 7153 1.352156 CGGAGTCTACACGGCAAAGC 61.352 60.000 0.00 0.00 0.00 3.51
4067 7170 0.896226 AAGCCGACTTACCAGAGACC 59.104 55.000 0.00 0.00 33.13 3.85
4095 7198 2.461945 TTTTGTGCGTTCGCCGTCA 61.462 52.632 14.44 8.37 39.32 4.35
4143 7246 1.400629 CCGCTGTGTTGCAAGATCTTG 60.401 52.381 27.82 27.82 43.14 3.02
4155 7258 0.694771 AGATCTTGGCTTGGCTCACA 59.305 50.000 0.00 0.00 0.00 3.58
4156 7259 1.074405 AGATCTTGGCTTGGCTCACAA 59.926 47.619 0.00 0.00 37.55 3.33
4164 7267 3.019564 GGCTTGGCTCACAATTCAGTAT 58.980 45.455 0.00 0.00 38.65 2.12
4165 7268 3.065925 GGCTTGGCTCACAATTCAGTATC 59.934 47.826 0.00 0.00 38.65 2.24
4169 7272 2.866762 GGCTCACAATTCAGTATCGACC 59.133 50.000 0.00 0.00 0.00 4.79
4180 7283 3.960755 TCAGTATCGACCATGGACATCTT 59.039 43.478 21.47 0.00 0.00 2.40
4181 7284 4.053983 CAGTATCGACCATGGACATCTTG 58.946 47.826 21.47 0.00 0.00 3.02
4182 7285 3.706594 AGTATCGACCATGGACATCTTGT 59.293 43.478 21.47 0.00 0.00 3.16
4183 7286 3.634397 ATCGACCATGGACATCTTGTT 57.366 42.857 21.47 0.00 0.00 2.83
4184 7287 2.698803 TCGACCATGGACATCTTGTTG 58.301 47.619 21.47 0.00 0.00 3.33
4185 7288 1.739466 CGACCATGGACATCTTGTTGG 59.261 52.381 21.47 0.00 33.24 3.77
4186 7289 2.094675 GACCATGGACATCTTGTTGGG 58.905 52.381 21.47 0.00 31.71 4.12
4187 7290 1.272648 ACCATGGACATCTTGTTGGGG 60.273 52.381 21.47 0.00 31.71 4.96
4188 7291 1.005805 CCATGGACATCTTGTTGGGGA 59.994 52.381 5.56 0.00 0.00 4.81
4189 7292 2.557229 CCATGGACATCTTGTTGGGGAA 60.557 50.000 5.56 0.00 0.00 3.97
4190 7293 2.286365 TGGACATCTTGTTGGGGAAC 57.714 50.000 0.00 0.00 0.00 3.62
4191 7294 1.496857 TGGACATCTTGTTGGGGAACA 59.503 47.619 0.00 0.00 0.00 3.18
4192 7295 2.109834 TGGACATCTTGTTGGGGAACAT 59.890 45.455 0.00 0.00 32.01 2.71
4193 7296 3.165071 GGACATCTTGTTGGGGAACATT 58.835 45.455 0.00 0.00 32.01 2.71
4194 7297 3.056607 GGACATCTTGTTGGGGAACATTG 60.057 47.826 0.00 0.00 32.01 2.82
4195 7298 2.299867 ACATCTTGTTGGGGAACATTGC 59.700 45.455 0.00 0.00 32.01 3.56
4196 7299 2.079170 TCTTGTTGGGGAACATTGCA 57.921 45.000 0.00 0.00 32.01 4.08
4197 7300 2.607499 TCTTGTTGGGGAACATTGCAT 58.393 42.857 0.00 0.00 32.01 3.96
4198 7301 2.299582 TCTTGTTGGGGAACATTGCATG 59.700 45.455 0.00 0.00 32.01 4.06
4199 7302 0.975135 TGTTGGGGAACATTGCATGG 59.025 50.000 0.00 0.00 33.60 3.66
4200 7303 0.249955 GTTGGGGAACATTGCATGGG 59.750 55.000 0.00 0.00 33.60 4.00
4201 7304 0.115944 TTGGGGAACATTGCATGGGA 59.884 50.000 0.00 0.00 33.60 4.37
4202 7305 0.115944 TGGGGAACATTGCATGGGAA 59.884 50.000 0.00 0.00 33.60 3.97
4203 7306 1.274712 GGGGAACATTGCATGGGAAA 58.725 50.000 0.00 0.00 33.60 3.13
4204 7307 1.066215 GGGGAACATTGCATGGGAAAC 60.066 52.381 0.00 0.00 33.60 2.78
4222 7325 6.448053 GGAAACCAAAAATTTTCTACGCTC 57.552 37.500 3.41 0.00 33.10 5.03
4223 7326 5.980715 GGAAACCAAAAATTTTCTACGCTCA 59.019 36.000 3.41 0.00 33.10 4.26
4224 7327 6.074516 GGAAACCAAAAATTTTCTACGCTCAC 60.075 38.462 3.41 0.00 33.10 3.51
4225 7328 5.767816 ACCAAAAATTTTCTACGCTCACT 57.232 34.783 3.41 0.00 0.00 3.41
4226 7329 6.870971 ACCAAAAATTTTCTACGCTCACTA 57.129 33.333 3.41 0.00 0.00 2.74
4227 7330 7.266922 ACCAAAAATTTTCTACGCTCACTAA 57.733 32.000 3.41 0.00 0.00 2.24
4228 7331 7.360361 ACCAAAAATTTTCTACGCTCACTAAG 58.640 34.615 3.41 0.00 0.00 2.18
4229 7332 7.227910 ACCAAAAATTTTCTACGCTCACTAAGA 59.772 33.333 3.41 0.00 0.00 2.10
4230 7333 8.237267 CCAAAAATTTTCTACGCTCACTAAGAT 58.763 33.333 3.41 0.00 0.00 2.40
4231 7334 9.267096 CAAAAATTTTCTACGCTCACTAAGATC 57.733 33.333 3.41 0.00 0.00 2.75
4232 7335 8.547967 AAAATTTTCTACGCTCACTAAGATCA 57.452 30.769 0.00 0.00 0.00 2.92
4233 7336 8.547967 AAATTTTCTACGCTCACTAAGATCAA 57.452 30.769 0.00 0.00 0.00 2.57
4234 7337 8.723942 AATTTTCTACGCTCACTAAGATCAAT 57.276 30.769 0.00 0.00 0.00 2.57
4235 7338 7.757097 TTTTCTACGCTCACTAAGATCAATC 57.243 36.000 0.00 0.00 0.00 2.67
4236 7339 6.701145 TTCTACGCTCACTAAGATCAATCT 57.299 37.500 0.00 0.00 39.22 2.40
4237 7340 7.803279 TTCTACGCTCACTAAGATCAATCTA 57.197 36.000 0.00 0.00 35.76 1.98
4238 7341 7.428282 TCTACGCTCACTAAGATCAATCTAG 57.572 40.000 0.00 0.00 35.76 2.43
4239 7342 5.446143 ACGCTCACTAAGATCAATCTAGG 57.554 43.478 0.00 0.00 35.76 3.02
4240 7343 5.133941 ACGCTCACTAAGATCAATCTAGGA 58.866 41.667 0.00 0.00 35.76 2.94
4241 7344 5.240623 ACGCTCACTAAGATCAATCTAGGAG 59.759 44.000 0.00 0.71 35.76 3.69
4242 7345 5.471797 CGCTCACTAAGATCAATCTAGGAGA 59.528 44.000 0.00 4.47 35.76 3.71
4243 7346 6.150976 CGCTCACTAAGATCAATCTAGGAGAT 59.849 42.308 0.00 0.00 36.28 2.75
4244 7347 7.315142 GCTCACTAAGATCAATCTAGGAGATG 58.685 42.308 0.00 4.84 34.65 2.90
4245 7348 7.176515 GCTCACTAAGATCAATCTAGGAGATGA 59.823 40.741 0.00 0.00 34.65 2.92
4246 7349 8.402798 TCACTAAGATCAATCTAGGAGATGAC 57.597 38.462 0.00 0.00 34.65 3.06
4247 7350 7.450014 TCACTAAGATCAATCTAGGAGATGACC 59.550 40.741 0.00 0.00 34.65 4.02
4248 7351 7.232330 CACTAAGATCAATCTAGGAGATGACCA 59.768 40.741 0.00 0.00 34.65 4.02
4249 7352 7.955185 ACTAAGATCAATCTAGGAGATGACCAT 59.045 37.037 0.00 0.00 34.65 3.55
4250 7353 6.855763 AGATCAATCTAGGAGATGACCATC 57.144 41.667 1.90 1.90 34.65 3.51
4251 7354 6.564099 AGATCAATCTAGGAGATGACCATCT 58.436 40.000 11.93 11.93 42.11 2.90
4252 7355 7.707648 AGATCAATCTAGGAGATGACCATCTA 58.292 38.462 12.06 0.00 40.72 1.98
4253 7356 7.615365 AGATCAATCTAGGAGATGACCATCTAC 59.385 40.741 13.10 13.10 46.80 2.59
4260 7363 3.866703 AGATGACCATCTACGAGAGGA 57.133 47.619 10.54 0.00 45.69 3.71
4261 7364 4.171878 AGATGACCATCTACGAGAGGAA 57.828 45.455 10.54 0.00 45.69 3.36
4262 7365 4.537751 AGATGACCATCTACGAGAGGAAA 58.462 43.478 10.54 0.00 45.69 3.13
4263 7366 4.582656 AGATGACCATCTACGAGAGGAAAG 59.417 45.833 10.54 0.00 45.69 2.62
4264 7367 3.964411 TGACCATCTACGAGAGGAAAGA 58.036 45.455 0.00 0.00 0.00 2.52
4265 7368 4.537751 TGACCATCTACGAGAGGAAAGAT 58.462 43.478 0.00 0.00 0.00 2.40
4266 7369 4.956700 TGACCATCTACGAGAGGAAAGATT 59.043 41.667 0.00 0.00 0.00 2.40
4267 7370 5.163509 TGACCATCTACGAGAGGAAAGATTG 60.164 44.000 0.00 0.00 0.00 2.67
4268 7371 4.054671 CCATCTACGAGAGGAAAGATTGC 58.945 47.826 0.00 0.00 0.00 3.56
4269 7372 4.442052 CCATCTACGAGAGGAAAGATTGCA 60.442 45.833 0.00 0.00 0.00 4.08
4270 7373 5.295950 CATCTACGAGAGGAAAGATTGCAT 58.704 41.667 0.00 0.00 0.00 3.96
4271 7374 4.938080 TCTACGAGAGGAAAGATTGCATC 58.062 43.478 0.00 0.00 0.00 3.91
4272 7375 3.902881 ACGAGAGGAAAGATTGCATCT 57.097 42.857 0.00 0.00 42.61 2.90
4273 7376 5.828328 TCTACGAGAGGAAAGATTGCATCTA 59.172 40.000 0.00 0.00 39.08 1.98
4274 7377 4.688021 ACGAGAGGAAAGATTGCATCTAC 58.312 43.478 0.00 0.00 39.08 2.59
4275 7378 4.160439 ACGAGAGGAAAGATTGCATCTACA 59.840 41.667 0.00 0.00 39.08 2.74
4276 7379 5.163364 ACGAGAGGAAAGATTGCATCTACAT 60.163 40.000 0.00 0.00 39.08 2.29
4277 7380 6.040955 ACGAGAGGAAAGATTGCATCTACATA 59.959 38.462 0.00 0.00 39.08 2.29
4278 7381 6.364706 CGAGAGGAAAGATTGCATCTACATAC 59.635 42.308 0.00 0.00 39.08 2.39
4279 7382 6.529220 AGAGGAAAGATTGCATCTACATACC 58.471 40.000 0.00 0.00 39.08 2.73
4280 7383 5.625150 AGGAAAGATTGCATCTACATACCC 58.375 41.667 0.00 0.00 39.08 3.69
4281 7384 5.370880 AGGAAAGATTGCATCTACATACCCT 59.629 40.000 0.00 0.00 39.08 4.34
4282 7385 6.064717 GGAAAGATTGCATCTACATACCCTT 58.935 40.000 0.00 0.00 39.08 3.95
4283 7386 7.072454 AGGAAAGATTGCATCTACATACCCTTA 59.928 37.037 0.00 0.00 39.08 2.69
4284 7387 7.885399 GGAAAGATTGCATCTACATACCCTTAT 59.115 37.037 0.00 0.00 39.08 1.73
4285 7388 9.944376 GAAAGATTGCATCTACATACCCTTATA 57.056 33.333 0.00 0.00 39.08 0.98
4286 7389 9.950496 AAAGATTGCATCTACATACCCTTATAG 57.050 33.333 0.00 0.00 39.08 1.31
4287 7390 8.901472 AGATTGCATCTACATACCCTTATAGA 57.099 34.615 0.00 0.00 38.00 1.98
4288 7391 9.499369 AGATTGCATCTACATACCCTTATAGAT 57.501 33.333 0.00 0.00 38.00 1.98
4289 7392 9.757227 GATTGCATCTACATACCCTTATAGATC 57.243 37.037 0.00 0.00 33.12 2.75
4290 7393 7.334844 TGCATCTACATACCCTTATAGATCG 57.665 40.000 0.00 0.00 33.12 3.69
4291 7394 6.183360 TGCATCTACATACCCTTATAGATCGC 60.183 42.308 0.00 0.00 33.12 4.58
4292 7395 6.039941 GCATCTACATACCCTTATAGATCGCT 59.960 42.308 0.00 0.00 33.12 4.93
4293 7396 7.228906 GCATCTACATACCCTTATAGATCGCTA 59.771 40.741 0.00 0.00 33.12 4.26
4294 7397 9.121658 CATCTACATACCCTTATAGATCGCTAA 57.878 37.037 0.00 0.00 33.12 3.09
4295 7398 8.734218 TCTACATACCCTTATAGATCGCTAAG 57.266 38.462 9.25 9.25 0.00 2.18
4296 7399 6.210287 ACATACCCTTATAGATCGCTAAGC 57.790 41.667 10.28 0.00 0.00 3.09
4311 7414 4.789095 GCTAAGCGGAATCGTTATGAAA 57.211 40.909 0.00 0.00 38.89 2.69
4312 7415 4.515432 GCTAAGCGGAATCGTTATGAAAC 58.485 43.478 0.00 0.00 38.89 2.78
4326 7429 6.476243 GTTATGAAACGTGGTTGATGTAGT 57.524 37.500 0.00 0.00 0.00 2.73
4327 7430 6.531439 GTTATGAAACGTGGTTGATGTAGTC 58.469 40.000 0.00 0.00 0.00 2.59
4328 7431 3.054166 TGAAACGTGGTTGATGTAGTCG 58.946 45.455 0.00 0.00 0.00 4.18
4329 7432 3.243468 TGAAACGTGGTTGATGTAGTCGA 60.243 43.478 0.00 0.00 0.00 4.20
4330 7433 3.374220 AACGTGGTTGATGTAGTCGAA 57.626 42.857 0.00 0.00 0.00 3.71
4331 7434 2.669364 ACGTGGTTGATGTAGTCGAAC 58.331 47.619 0.00 0.00 0.00 3.95
4332 7435 1.647213 CGTGGTTGATGTAGTCGAACG 59.353 52.381 0.00 0.00 29.72 3.95
4333 7436 2.669364 GTGGTTGATGTAGTCGAACGT 58.331 47.619 0.00 0.00 29.72 3.99
4334 7437 2.660236 GTGGTTGATGTAGTCGAACGTC 59.340 50.000 3.01 3.01 36.19 4.34
4335 7438 2.555325 TGGTTGATGTAGTCGAACGTCT 59.445 45.455 10.09 0.00 36.53 4.18
4336 7439 3.005050 TGGTTGATGTAGTCGAACGTCTT 59.995 43.478 10.09 0.00 36.53 3.01
4337 7440 3.607209 GGTTGATGTAGTCGAACGTCTTC 59.393 47.826 10.09 4.37 36.53 2.87
4349 7452 3.507597 CGTCTTCGTGGTCCAATCA 57.492 52.632 0.00 0.00 0.00 2.57
4350 7453 1.068474 CGTCTTCGTGGTCCAATCAC 58.932 55.000 0.00 0.00 0.00 3.06
4356 7459 2.677971 GTGGTCCAATCACGATCCG 58.322 57.895 0.00 0.00 0.00 4.18
4357 7460 0.108329 GTGGTCCAATCACGATCCGT 60.108 55.000 0.00 0.00 42.36 4.69
4358 7461 0.174845 TGGTCCAATCACGATCCGTC 59.825 55.000 0.00 0.00 38.32 4.79
4359 7462 0.529992 GGTCCAATCACGATCCGTCC 60.530 60.000 0.00 0.00 38.32 4.79
4360 7463 0.529992 GTCCAATCACGATCCGTCCC 60.530 60.000 0.00 0.00 38.32 4.46
4361 7464 0.973496 TCCAATCACGATCCGTCCCA 60.973 55.000 0.00 0.00 38.32 4.37
4362 7465 0.810031 CCAATCACGATCCGTCCCAC 60.810 60.000 0.00 0.00 38.32 4.61
4363 7466 1.141019 AATCACGATCCGTCCCACG 59.859 57.895 0.00 0.00 38.32 4.94
4364 7467 1.317431 AATCACGATCCGTCCCACGA 61.317 55.000 0.00 0.00 46.05 4.35
4365 7468 1.317431 ATCACGATCCGTCCCACGAA 61.317 55.000 0.00 0.00 46.05 3.85
4366 7469 1.804326 CACGATCCGTCCCACGAAC 60.804 63.158 0.00 0.00 46.05 3.95
4367 7470 1.975407 ACGATCCGTCCCACGAACT 60.975 57.895 0.00 0.00 46.05 3.01
4368 7471 1.226603 CGATCCGTCCCACGAACTC 60.227 63.158 0.00 0.00 46.05 3.01
4369 7472 1.141234 GATCCGTCCCACGAACTCC 59.859 63.158 0.00 0.00 46.05 3.85
4370 7473 1.305046 ATCCGTCCCACGAACTCCT 60.305 57.895 0.00 0.00 46.05 3.69
4371 7474 1.605058 ATCCGTCCCACGAACTCCTG 61.605 60.000 0.00 0.00 46.05 3.86
4372 7475 2.273179 CCGTCCCACGAACTCCTGA 61.273 63.158 0.00 0.00 46.05 3.86
4373 7476 1.605058 CCGTCCCACGAACTCCTGAT 61.605 60.000 0.00 0.00 46.05 2.90
4374 7477 0.179134 CGTCCCACGAACTCCTGATC 60.179 60.000 0.00 0.00 46.05 2.92
4375 7478 0.175989 GTCCCACGAACTCCTGATCC 59.824 60.000 0.00 0.00 0.00 3.36
4376 7479 0.252057 TCCCACGAACTCCTGATCCA 60.252 55.000 0.00 0.00 0.00 3.41
4377 7480 0.613260 CCCACGAACTCCTGATCCAA 59.387 55.000 0.00 0.00 0.00 3.53
4378 7481 1.406069 CCCACGAACTCCTGATCCAAG 60.406 57.143 0.00 0.00 0.00 3.61
4379 7482 1.276421 CCACGAACTCCTGATCCAAGT 59.724 52.381 0.00 0.00 0.00 3.16
4380 7483 2.341257 CACGAACTCCTGATCCAAGTG 58.659 52.381 0.00 0.00 0.00 3.16
4381 7484 1.338200 ACGAACTCCTGATCCAAGTGC 60.338 52.381 0.00 0.00 0.00 4.40
4382 7485 1.743996 GAACTCCTGATCCAAGTGCC 58.256 55.000 0.00 0.00 0.00 5.01
4383 7486 0.036010 AACTCCTGATCCAAGTGCCG 60.036 55.000 0.00 0.00 0.00 5.69
4384 7487 0.904865 ACTCCTGATCCAAGTGCCGA 60.905 55.000 0.00 0.00 0.00 5.54
4385 7488 0.250234 CTCCTGATCCAAGTGCCGAA 59.750 55.000 0.00 0.00 0.00 4.30
4386 7489 0.036388 TCCTGATCCAAGTGCCGAAC 60.036 55.000 0.00 0.00 0.00 3.95
4387 7490 0.321564 CCTGATCCAAGTGCCGAACA 60.322 55.000 0.00 0.00 0.00 3.18
4388 7491 1.081892 CTGATCCAAGTGCCGAACAG 58.918 55.000 0.00 0.00 0.00 3.16
4389 7492 0.684535 TGATCCAAGTGCCGAACAGA 59.315 50.000 0.00 0.00 0.00 3.41
4390 7493 1.278985 TGATCCAAGTGCCGAACAGAT 59.721 47.619 0.00 0.00 0.00 2.90
4391 7494 1.667724 GATCCAAGTGCCGAACAGATG 59.332 52.381 0.00 0.00 0.00 2.90
4392 7495 0.321564 TCCAAGTGCCGAACAGATGG 60.322 55.000 0.00 0.00 33.09 3.51
4407 7510 3.737824 TGGCACATTCGCGTTCAA 58.262 50.000 5.77 0.00 0.00 2.69
4408 7511 1.281353 TGGCACATTCGCGTTCAAC 59.719 52.632 5.77 0.00 0.00 3.18
4409 7512 1.281353 GGCACATTCGCGTTCAACA 59.719 52.632 5.77 0.00 0.00 3.33
4410 7513 0.996727 GGCACATTCGCGTTCAACAC 60.997 55.000 5.77 0.00 0.00 3.32
4411 7514 0.316607 GCACATTCGCGTTCAACACA 60.317 50.000 5.77 0.00 0.00 3.72
4412 7515 1.385038 CACATTCGCGTTCAACACAC 58.615 50.000 5.77 0.00 0.00 3.82
4413 7516 0.306533 ACATTCGCGTTCAACACACC 59.693 50.000 5.77 0.00 0.00 4.16
4414 7517 0.586319 CATTCGCGTTCAACACACCT 59.414 50.000 5.77 0.00 0.00 4.00
4415 7518 1.795872 CATTCGCGTTCAACACACCTA 59.204 47.619 5.77 0.00 0.00 3.08
4416 7519 1.210870 TTCGCGTTCAACACACCTAC 58.789 50.000 5.77 0.00 0.00 3.18
4417 7520 0.935831 TCGCGTTCAACACACCTACG 60.936 55.000 5.77 0.00 35.48 3.51
4418 7521 0.935831 CGCGTTCAACACACCTACGA 60.936 55.000 0.00 0.00 34.36 3.43
4419 7522 0.505655 GCGTTCAACACACCTACGAC 59.494 55.000 0.00 0.00 34.36 4.34
4420 7523 1.866880 GCGTTCAACACACCTACGACT 60.867 52.381 0.00 0.00 34.36 4.18
4421 7524 2.466846 CGTTCAACACACCTACGACTT 58.533 47.619 0.00 0.00 34.36 3.01
4422 7525 2.217847 CGTTCAACACACCTACGACTTG 59.782 50.000 0.00 0.00 34.36 3.16
4423 7526 3.450578 GTTCAACACACCTACGACTTGA 58.549 45.455 0.00 0.00 0.00 3.02
4424 7527 4.056050 GTTCAACACACCTACGACTTGAT 58.944 43.478 0.00 0.00 0.00 2.57
4425 7528 3.649073 TCAACACACCTACGACTTGATG 58.351 45.455 0.00 0.00 0.00 3.07
4426 7529 3.319689 TCAACACACCTACGACTTGATGA 59.680 43.478 0.00 0.00 0.00 2.92
4427 7530 3.299340 ACACACCTACGACTTGATGAC 57.701 47.619 0.00 0.00 0.00 3.06
4428 7531 2.251040 CACACCTACGACTTGATGACG 58.749 52.381 0.00 0.00 39.53 4.35
4429 7532 1.269166 CACCTACGACTTGATGACGC 58.731 55.000 0.00 0.00 37.34 5.19
4430 7533 1.135373 CACCTACGACTTGATGACGCT 60.135 52.381 0.00 0.00 37.34 5.07
4431 7534 1.544691 ACCTACGACTTGATGACGCTT 59.455 47.619 0.00 0.00 37.34 4.68
4432 7535 2.029290 ACCTACGACTTGATGACGCTTT 60.029 45.455 0.00 0.00 37.34 3.51
4433 7536 2.599082 CCTACGACTTGATGACGCTTTC 59.401 50.000 0.00 0.00 37.34 2.62
4434 7537 2.148916 ACGACTTGATGACGCTTTCA 57.851 45.000 0.00 0.00 39.11 2.69
4435 7538 1.792949 ACGACTTGATGACGCTTTCAC 59.207 47.619 0.00 0.00 36.92 3.18
4436 7539 1.126846 CGACTTGATGACGCTTTCACC 59.873 52.381 0.00 0.00 36.92 4.02
4437 7540 2.417719 GACTTGATGACGCTTTCACCT 58.582 47.619 0.00 0.00 36.92 4.00
4438 7541 2.413453 GACTTGATGACGCTTTCACCTC 59.587 50.000 0.00 0.00 36.92 3.85
4439 7542 1.734465 CTTGATGACGCTTTCACCTCC 59.266 52.381 0.00 0.00 36.92 4.30
4440 7543 0.976641 TGATGACGCTTTCACCTCCT 59.023 50.000 0.00 0.00 36.92 3.69
4441 7544 1.066858 TGATGACGCTTTCACCTCCTC 60.067 52.381 0.00 0.00 36.92 3.71
4442 7545 0.976641 ATGACGCTTTCACCTCCTCA 59.023 50.000 0.00 0.00 36.92 3.86
4443 7546 0.756294 TGACGCTTTCACCTCCTCAA 59.244 50.000 0.00 0.00 0.00 3.02
4444 7547 1.347707 TGACGCTTTCACCTCCTCAAT 59.652 47.619 0.00 0.00 0.00 2.57
4445 7548 2.003301 GACGCTTTCACCTCCTCAATC 58.997 52.381 0.00 0.00 0.00 2.67
4446 7549 1.339151 ACGCTTTCACCTCCTCAATCC 60.339 52.381 0.00 0.00 0.00 3.01
4447 7550 1.339055 CGCTTTCACCTCCTCAATCCA 60.339 52.381 0.00 0.00 0.00 3.41
4448 7551 2.363683 GCTTTCACCTCCTCAATCCAG 58.636 52.381 0.00 0.00 0.00 3.86
4449 7552 2.363683 CTTTCACCTCCTCAATCCAGC 58.636 52.381 0.00 0.00 0.00 4.85
4450 7553 0.250234 TTCACCTCCTCAATCCAGCG 59.750 55.000 0.00 0.00 0.00 5.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.294138 CCGGTCTTAAACGCTGGGA 59.706 57.895 0.00 0.00 0.00 4.37
1 2 0.604511 AACCGGTCTTAAACGCTGGG 60.605 55.000 8.04 0.00 0.00 4.45
2 3 1.232119 AAACCGGTCTTAAACGCTGG 58.768 50.000 8.04 0.00 0.00 4.85
3 4 3.120442 CCTTAAACCGGTCTTAAACGCTG 60.120 47.826 8.04 3.56 0.00 5.18
4 5 3.069289 CCTTAAACCGGTCTTAAACGCT 58.931 45.455 8.04 0.00 0.00 5.07
5 6 2.413239 GCCTTAAACCGGTCTTAAACGC 60.413 50.000 8.04 14.15 0.00 4.84
6 7 2.159801 CGCCTTAAACCGGTCTTAAACG 60.160 50.000 8.04 15.82 0.00 3.60
7 8 2.413239 GCGCCTTAAACCGGTCTTAAAC 60.413 50.000 8.04 9.10 0.00 2.01
8 9 1.805943 GCGCCTTAAACCGGTCTTAAA 59.194 47.619 8.04 0.00 0.00 1.52
9 10 1.441738 GCGCCTTAAACCGGTCTTAA 58.558 50.000 8.04 13.75 0.00 1.85
10 11 0.391528 GGCGCCTTAAACCGGTCTTA 60.392 55.000 22.15 6.34 0.00 2.10
11 12 1.673337 GGCGCCTTAAACCGGTCTT 60.673 57.895 22.15 7.43 0.00 3.01
12 13 2.046604 GGCGCCTTAAACCGGTCT 60.047 61.111 22.15 0.00 0.00 3.85
13 14 3.129502 GGGCGCCTTAAACCGGTC 61.130 66.667 28.56 0.41 0.00 4.79
18 19 3.810896 CAGCCGGGCGCCTTAAAC 61.811 66.667 28.56 8.15 38.78 2.01
19 20 2.957080 TACAGCCGGGCGCCTTAAA 61.957 57.895 28.56 2.63 38.78 1.52
20 21 3.392243 TACAGCCGGGCGCCTTAA 61.392 61.111 28.56 2.02 38.78 1.85
21 22 4.151582 GTACAGCCGGGCGCCTTA 62.152 66.667 28.56 5.40 38.78 2.69
28 29 2.510064 TTTAGCCGTGTACAGCCGGG 62.510 60.000 22.16 11.25 44.36 5.73
29 30 1.079681 TTTAGCCGTGTACAGCCGG 60.080 57.895 18.04 18.04 46.90 6.13
30 31 0.389426 AGTTTAGCCGTGTACAGCCG 60.389 55.000 0.00 0.00 0.00 5.52
31 32 1.356938 GAGTTTAGCCGTGTACAGCC 58.643 55.000 0.00 0.00 0.00 4.85
32 33 0.989890 CGAGTTTAGCCGTGTACAGC 59.010 55.000 0.00 0.00 0.00 4.40
33 34 2.248487 GTCGAGTTTAGCCGTGTACAG 58.752 52.381 0.00 0.00 0.00 2.74
34 35 1.068333 GGTCGAGTTTAGCCGTGTACA 60.068 52.381 0.00 0.00 0.00 2.90
35 36 1.200948 AGGTCGAGTTTAGCCGTGTAC 59.799 52.381 0.00 0.00 0.00 2.90
36 37 1.200716 CAGGTCGAGTTTAGCCGTGTA 59.799 52.381 0.00 0.00 0.00 2.90
37 38 0.038526 CAGGTCGAGTTTAGCCGTGT 60.039 55.000 0.00 0.00 0.00 4.49
38 39 0.242825 TCAGGTCGAGTTTAGCCGTG 59.757 55.000 0.00 0.00 0.00 4.94
39 40 0.963962 TTCAGGTCGAGTTTAGCCGT 59.036 50.000 0.00 0.00 0.00 5.68
40 41 1.336517 TGTTCAGGTCGAGTTTAGCCG 60.337 52.381 0.00 0.00 0.00 5.52
41 42 2.067013 GTGTTCAGGTCGAGTTTAGCC 58.933 52.381 0.00 0.00 0.00 3.93
42 43 2.731976 CTGTGTTCAGGTCGAGTTTAGC 59.268 50.000 0.00 0.00 37.97 3.09
54 55 4.614535 GCAAATAAGACAGCCTGTGTTCAG 60.615 45.833 10.87 1.53 40.56 3.02
55 56 3.253188 GCAAATAAGACAGCCTGTGTTCA 59.747 43.478 10.87 0.00 40.56 3.18
56 57 3.366374 GGCAAATAAGACAGCCTGTGTTC 60.366 47.826 10.87 0.00 43.70 3.18
57 58 2.558359 GGCAAATAAGACAGCCTGTGTT 59.442 45.455 12.23 12.23 43.70 3.32
58 59 2.162681 GGCAAATAAGACAGCCTGTGT 58.837 47.619 0.00 0.00 43.70 3.72
59 60 1.131126 CGGCAAATAAGACAGCCTGTG 59.869 52.381 0.00 0.00 44.85 3.66
60 61 1.271379 ACGGCAAATAAGACAGCCTGT 60.271 47.619 0.00 0.00 44.85 4.00
61 62 1.131126 CACGGCAAATAAGACAGCCTG 59.869 52.381 0.00 0.00 44.85 4.85
62 63 1.003118 TCACGGCAAATAAGACAGCCT 59.997 47.619 0.00 0.00 44.85 4.58
63 64 1.448985 TCACGGCAAATAAGACAGCC 58.551 50.000 0.00 0.00 43.61 4.85
64 65 2.414161 GGTTCACGGCAAATAAGACAGC 60.414 50.000 0.00 0.00 0.00 4.40
65 66 2.159707 CGGTTCACGGCAAATAAGACAG 60.160 50.000 0.00 0.00 39.42 3.51
66 67 1.801771 CGGTTCACGGCAAATAAGACA 59.198 47.619 0.00 0.00 39.42 3.41
67 68 1.465187 GCGGTTCACGGCAAATAAGAC 60.465 52.381 4.72 0.00 44.51 3.01
68 69 0.800012 GCGGTTCACGGCAAATAAGA 59.200 50.000 4.72 0.00 44.51 2.10
69 70 0.519519 TGCGGTTCACGGCAAATAAG 59.480 50.000 9.54 0.00 46.76 1.73
70 71 2.630214 TGCGGTTCACGGCAAATAA 58.370 47.368 9.54 0.00 46.76 1.40
71 72 4.380980 TGCGGTTCACGGCAAATA 57.619 50.000 9.54 0.00 46.76 1.40
76 77 2.782615 GTACATGCGGTTCACGGC 59.217 61.111 2.66 2.66 44.51 5.68
77 78 3.077705 CGTACATGCGGTTCACGG 58.922 61.111 0.00 0.00 44.51 4.94
78 79 2.009625 GAGCGTACATGCGGTTCACG 62.010 60.000 0.00 0.00 42.89 4.35
79 80 1.693083 GGAGCGTACATGCGGTTCAC 61.693 60.000 0.00 0.00 42.89 3.18
80 81 1.447140 GGAGCGTACATGCGGTTCA 60.447 57.895 0.00 0.00 42.89 3.18
81 82 1.146358 GAGGAGCGTACATGCGGTTC 61.146 60.000 0.00 0.00 42.89 3.62
82 83 1.153628 GAGGAGCGTACATGCGGTT 60.154 57.895 0.00 0.00 42.89 4.44
83 84 1.605058 AAGAGGAGCGTACATGCGGT 61.605 55.000 0.00 0.00 45.63 5.68
84 85 0.460284 AAAGAGGAGCGTACATGCGG 60.460 55.000 0.00 0.00 40.67 5.69
85 86 0.647410 CAAAGAGGAGCGTACATGCG 59.353 55.000 0.00 0.00 40.67 4.73
86 87 1.661112 GACAAAGAGGAGCGTACATGC 59.339 52.381 0.00 0.00 0.00 4.06
87 88 2.959516 TGACAAAGAGGAGCGTACATG 58.040 47.619 0.00 0.00 0.00 3.21
88 89 3.678056 TTGACAAAGAGGAGCGTACAT 57.322 42.857 0.00 0.00 0.00 2.29
89 90 3.585862 GATTGACAAAGAGGAGCGTACA 58.414 45.455 0.00 0.00 0.00 2.90
90 91 2.599082 CGATTGACAAAGAGGAGCGTAC 59.401 50.000 0.00 0.00 0.00 3.67
91 92 2.876091 CGATTGACAAAGAGGAGCGTA 58.124 47.619 0.00 0.00 0.00 4.42
92 93 1.714794 CGATTGACAAAGAGGAGCGT 58.285 50.000 0.00 0.00 0.00 5.07
93 94 0.371645 GCGATTGACAAAGAGGAGCG 59.628 55.000 0.00 0.00 0.00 5.03
94 95 1.396301 CTGCGATTGACAAAGAGGAGC 59.604 52.381 0.00 0.00 0.00 4.70
95 96 2.964740 TCTGCGATTGACAAAGAGGAG 58.035 47.619 0.00 0.00 0.00 3.69
96 97 3.401033 TTCTGCGATTGACAAAGAGGA 57.599 42.857 0.00 0.00 0.00 3.71
97 98 4.154737 TGATTTCTGCGATTGACAAAGAGG 59.845 41.667 0.00 0.00 0.00 3.69
98 99 5.287170 TGATTTCTGCGATTGACAAAGAG 57.713 39.130 0.00 0.00 0.00 2.85
99 100 5.451908 GTTGATTTCTGCGATTGACAAAGA 58.548 37.500 0.00 0.00 0.00 2.52
100 101 4.618489 GGTTGATTTCTGCGATTGACAAAG 59.382 41.667 0.00 0.00 0.00 2.77
101 102 4.545610 GGTTGATTTCTGCGATTGACAAA 58.454 39.130 0.00 0.00 0.00 2.83
102 103 3.364864 CGGTTGATTTCTGCGATTGACAA 60.365 43.478 0.00 0.00 0.00 3.18
103 104 2.159430 CGGTTGATTTCTGCGATTGACA 59.841 45.455 0.00 0.00 0.00 3.58
104 105 2.774007 CGGTTGATTTCTGCGATTGAC 58.226 47.619 0.00 0.00 0.00 3.18
105 106 1.130373 GCGGTTGATTTCTGCGATTGA 59.870 47.619 0.00 0.00 0.00 2.57
106 107 1.135717 TGCGGTTGATTTCTGCGATTG 60.136 47.619 0.00 0.00 39.73 2.67
107 108 1.131126 CTGCGGTTGATTTCTGCGATT 59.869 47.619 0.00 0.00 39.73 3.34
108 109 0.729116 CTGCGGTTGATTTCTGCGAT 59.271 50.000 0.00 0.00 39.73 4.58
109 110 1.911293 GCTGCGGTTGATTTCTGCGA 61.911 55.000 0.00 0.00 39.73 5.10
110 111 1.512734 GCTGCGGTTGATTTCTGCG 60.513 57.895 0.00 0.00 39.73 5.18
111 112 0.455633 CTGCTGCGGTTGATTTCTGC 60.456 55.000 0.00 0.00 37.66 4.26
112 113 0.877071 ACTGCTGCGGTTGATTTCTG 59.123 50.000 8.62 0.00 0.00 3.02
113 114 0.877071 CACTGCTGCGGTTGATTTCT 59.123 50.000 12.25 0.00 0.00 2.52
114 115 0.874390 TCACTGCTGCGGTTGATTTC 59.126 50.000 12.25 0.00 0.00 2.17
115 116 1.317613 TTCACTGCTGCGGTTGATTT 58.682 45.000 12.25 0.00 0.00 2.17
116 117 1.317613 TTTCACTGCTGCGGTTGATT 58.682 45.000 12.25 0.00 0.00 2.57
117 118 1.538047 ATTTCACTGCTGCGGTTGAT 58.462 45.000 12.25 3.46 0.00 2.57
118 119 2.177394 TATTTCACTGCTGCGGTTGA 57.823 45.000 12.25 10.19 0.00 3.18
119 120 4.609113 CGATATATTTCACTGCTGCGGTTG 60.609 45.833 12.25 7.95 0.00 3.77
120 121 3.494626 CGATATATTTCACTGCTGCGGTT 59.505 43.478 12.25 0.00 0.00 4.44
121 122 3.059884 CGATATATTTCACTGCTGCGGT 58.940 45.455 8.62 8.62 0.00 5.68
122 123 2.159787 GCGATATATTTCACTGCTGCGG 60.160 50.000 6.98 6.98 0.00 5.69
123 124 2.733552 AGCGATATATTTCACTGCTGCG 59.266 45.455 0.00 0.00 0.00 5.18
124 125 4.062853 CAGCGATATATTTCACTGCTGC 57.937 45.455 7.99 0.00 41.38 5.25
126 127 6.238484 GGAAAACAGCGATATATTTCACTGCT 60.238 38.462 10.10 0.98 30.57 4.24
127 128 5.909610 GGAAAACAGCGATATATTTCACTGC 59.090 40.000 10.10 0.00 30.57 4.40
128 129 7.225538 AGAGGAAAACAGCGATATATTTCACTG 59.774 37.037 8.97 8.97 33.11 3.66
129 130 7.275920 AGAGGAAAACAGCGATATATTTCACT 58.724 34.615 7.13 4.05 32.91 3.41
130 131 7.484035 AGAGGAAAACAGCGATATATTTCAC 57.516 36.000 7.13 2.41 32.91 3.18
131 132 6.420903 CGAGAGGAAAACAGCGATATATTTCA 59.579 38.462 7.13 0.00 32.91 2.69
132 133 6.421202 ACGAGAGGAAAACAGCGATATATTTC 59.579 38.462 0.00 0.00 0.00 2.17
133 134 6.281405 ACGAGAGGAAAACAGCGATATATTT 58.719 36.000 0.00 0.00 0.00 1.40
134 135 5.844004 ACGAGAGGAAAACAGCGATATATT 58.156 37.500 0.00 0.00 0.00 1.28
135 136 5.455056 ACGAGAGGAAAACAGCGATATAT 57.545 39.130 0.00 0.00 0.00 0.86
136 137 4.913335 ACGAGAGGAAAACAGCGATATA 57.087 40.909 0.00 0.00 0.00 0.86
137 138 3.802948 ACGAGAGGAAAACAGCGATAT 57.197 42.857 0.00 0.00 0.00 1.63
138 139 3.181493 GGTACGAGAGGAAAACAGCGATA 60.181 47.826 0.00 0.00 0.00 2.92
139 140 2.416972 GGTACGAGAGGAAAACAGCGAT 60.417 50.000 0.00 0.00 0.00 4.58
140 141 1.068055 GGTACGAGAGGAAAACAGCGA 60.068 52.381 0.00 0.00 0.00 4.93
326 331 3.353836 GCCGCCGAAGCAAAGACA 61.354 61.111 0.00 0.00 39.83 3.41
353 358 5.297547 TCCGAAGAATATTTATTCAGCGCT 58.702 37.500 2.64 2.64 43.43 5.92
354 359 5.591643 TCCGAAGAATATTTATTCAGCGC 57.408 39.130 0.00 0.00 43.43 5.92
505 510 3.432186 GCTGGAGCAAACACCGTT 58.568 55.556 0.00 0.00 41.59 4.44
593 598 1.598701 GCCCAGCACATGTTCCTTCC 61.599 60.000 0.00 0.00 0.00 3.46
596 601 1.001641 GAGCCCAGCACATGTTCCT 60.002 57.895 0.00 0.00 0.00 3.36
625 630 2.290960 GGAGGAAACTACACCTGCCATT 60.291 50.000 0.00 0.00 42.76 3.16
653 658 1.152183 ACCCCACCACGACTAAGGT 60.152 57.895 0.00 0.00 39.10 3.50
654 659 1.295423 CACCCCACCACGACTAAGG 59.705 63.158 0.00 0.00 0.00 2.69
764 769 1.672363 TGATAAGCAGCTTTGCGGATG 59.328 47.619 14.29 0.00 40.27 3.51
815 820 6.437928 CAAAGAAAAGAATGACGAATCACCA 58.562 36.000 0.00 0.00 37.79 4.17
838 843 4.584518 CCACCACAGCAGCCACCA 62.585 66.667 0.00 0.00 0.00 4.17
875 880 0.249868 TCTGAGCTTGACACCAACGG 60.250 55.000 0.00 0.00 0.00 4.44
927 932 6.539464 ACAGAGTACAAATCACGTAAAAACCA 59.461 34.615 0.00 0.00 0.00 3.67
1010 1015 1.602771 GCTCGGTTTAGGGCTTCCT 59.397 57.895 0.00 0.00 44.52 3.36
1021 1026 2.920912 TCGGGTTCTGGCTCGGTT 60.921 61.111 0.00 0.00 32.39 4.44
1024 1029 4.796231 CCGTCGGGTTCTGGCTCG 62.796 72.222 2.34 0.00 0.00 5.03
1033 1038 1.400530 GGGATCTTGATCCGTCGGGT 61.401 60.000 19.72 3.14 41.63 5.28
1064 1069 3.186047 CGGTTGGCTACGCTTCCG 61.186 66.667 0.00 0.00 41.14 4.30
1078 1083 0.698818 AGGGGCAAGAGATTTTCGGT 59.301 50.000 0.00 0.00 0.00 4.69
1085 1090 1.222936 CGAAGCAGGGGCAAGAGAT 59.777 57.895 0.00 0.00 44.61 2.75
1112 1117 3.451556 CTGCATCCCAGCGTCGGAT 62.452 63.158 0.00 0.00 40.94 4.18
1113 1118 4.147449 CTGCATCCCAGCGTCGGA 62.147 66.667 0.00 0.00 37.31 4.55
1298 1310 4.410400 GCCGGGGAGGAGTTGTGG 62.410 72.222 2.18 0.00 45.00 4.17
1492 1504 8.353684 TGGCGAAAATATAAACAGAAAAGAACA 58.646 29.630 0.00 0.00 0.00 3.18
1522 1544 9.614792 AAGAAAACGAATAGAAGTAAGCCATAT 57.385 29.630 0.00 0.00 0.00 1.78
1798 1826 7.238096 TCCAGGTATGTCCCTTTTACTTTTCTA 59.762 37.037 0.00 0.00 36.75 2.10
1799 1827 6.045106 TCCAGGTATGTCCCTTTTACTTTTCT 59.955 38.462 0.00 0.00 36.75 2.52
1910 2057 1.468520 CGCATTGACACTTGTTAGGGG 59.531 52.381 0.00 0.00 0.00 4.79
1930 2077 2.688507 CATGCGACCACTATCCCATAC 58.311 52.381 0.00 0.00 0.00 2.39
1993 2143 6.207417 AGTTCCTTCCACACATTCAACATAAG 59.793 38.462 0.00 0.00 0.00 1.73
2074 2225 0.618458 AAAGGCATCCGGTTCAGCTA 59.382 50.000 0.00 0.00 0.00 3.32
2235 2390 3.567397 TGAGAACCCTAGTAGGAGCATC 58.433 50.000 18.43 10.44 37.67 3.91
2263 2418 7.790782 AAAGGGGAATAGCATGTTTCTTTAA 57.209 32.000 0.00 0.00 0.00 1.52
2276 2447 7.780271 AGCATCTAAGGTTTAAAAGGGGAATAG 59.220 37.037 0.00 0.00 0.00 1.73
2292 2463 3.632604 TCGTAAGTCCAGAGCATCTAAGG 59.367 47.826 0.00 0.00 41.65 2.69
2378 2552 5.819991 ACATATTCCACAACAATGTCCTCT 58.180 37.500 0.00 0.00 37.82 3.69
2393 2567 6.803642 ACTTACGAGGTCAGTAACATATTCC 58.196 40.000 0.00 0.00 31.59 3.01
2509 3148 3.450457 ACAAATGGCAGAAAACAGGTCAA 59.550 39.130 0.00 0.00 0.00 3.18
2515 3154 5.590530 AGTTGTACAAATGGCAGAAAACA 57.409 34.783 10.51 0.00 0.00 2.83
2516 3155 7.145323 ACATAGTTGTACAAATGGCAGAAAAC 58.855 34.615 18.30 0.00 33.16 2.43
2619 3689 8.734386 ACTCTATTGAAAAGATGAACAATGGTC 58.266 33.333 0.00 0.00 34.50 4.02
2668 3738 2.214376 TGCATAGGAAACCACCCAAG 57.786 50.000 0.00 0.00 0.00 3.61
2675 3745 9.683069 CAATTATGTCTATTTGCATAGGAAACC 57.317 33.333 0.00 0.00 34.12 3.27
2761 3831 6.551385 ACTTGAAATCACATTGACTCACTC 57.449 37.500 0.00 0.00 0.00 3.51
2850 3921 5.745294 CGCAATTATGGATTTCTTGGTTCAG 59.255 40.000 0.00 0.00 0.00 3.02
2867 3938 6.458232 AACTGGTTAAATATGGCGCAATTA 57.542 33.333 10.83 0.00 0.00 1.40
2906 3979 7.333528 TGGAATTATAAACAGCCATGAACTC 57.666 36.000 0.00 0.00 0.00 3.01
3091 4169 9.653287 CACAAGTGAAGAGGAAATAACATAGTA 57.347 33.333 0.00 0.00 0.00 1.82
3130 4210 3.967332 ATGCAAATGCTTAGCTTTGGT 57.033 38.095 21.28 2.49 42.66 3.67
3306 4661 4.672587 TGCAGATAACATGGTAGTCTCC 57.327 45.455 0.00 0.00 0.00 3.71
3333 4688 3.070878 TGCATTGTCTGACCAGTTAGTGA 59.929 43.478 5.17 0.00 0.00 3.41
3414 4771 2.095853 GGATTGCTTACCACATGTGTCG 59.904 50.000 23.79 12.35 0.00 4.35
3419 4776 4.789012 AGTTTGGATTGCTTACCACATG 57.211 40.909 0.00 0.00 35.81 3.21
3420 4777 6.663093 TGAATAGTTTGGATTGCTTACCACAT 59.337 34.615 0.00 0.00 35.81 3.21
3421 4778 6.007076 TGAATAGTTTGGATTGCTTACCACA 58.993 36.000 0.00 0.00 35.81 4.17
3422 4779 6.509418 TGAATAGTTTGGATTGCTTACCAC 57.491 37.500 0.00 0.00 35.81 4.16
3451 4811 4.882842 ACTCTTCTCCTTCCTGTTCTTC 57.117 45.455 0.00 0.00 0.00 2.87
3452 4812 5.104318 ACAAACTCTTCTCCTTCCTGTTCTT 60.104 40.000 0.00 0.00 0.00 2.52
3453 4813 4.410555 ACAAACTCTTCTCCTTCCTGTTCT 59.589 41.667 0.00 0.00 0.00 3.01
3454 4814 4.709250 ACAAACTCTTCTCCTTCCTGTTC 58.291 43.478 0.00 0.00 0.00 3.18
3455 4815 4.779993 ACAAACTCTTCTCCTTCCTGTT 57.220 40.909 0.00 0.00 0.00 3.16
3456 4816 4.779993 AACAAACTCTTCTCCTTCCTGT 57.220 40.909 0.00 0.00 0.00 4.00
3457 4817 4.517075 GGAAACAAACTCTTCTCCTTCCTG 59.483 45.833 0.00 0.00 0.00 3.86
3458 4818 4.413851 AGGAAACAAACTCTTCTCCTTCCT 59.586 41.667 0.00 0.00 37.25 3.36
3459 4819 4.517075 CAGGAAACAAACTCTTCTCCTTCC 59.483 45.833 0.00 0.00 30.78 3.46
3460 4820 5.126779 ACAGGAAACAAACTCTTCTCCTTC 58.873 41.667 0.00 0.00 30.78 3.46
3461 4821 5.117406 ACAGGAAACAAACTCTTCTCCTT 57.883 39.130 0.00 0.00 30.78 3.36
3462 4822 4.164221 TGACAGGAAACAAACTCTTCTCCT 59.836 41.667 0.00 0.00 33.50 3.69
3463 4823 4.451900 TGACAGGAAACAAACTCTTCTCC 58.548 43.478 0.00 0.00 0.00 3.71
3464 4824 5.586643 ACTTGACAGGAAACAAACTCTTCTC 59.413 40.000 0.00 0.00 0.00 2.87
3465 4825 5.501156 ACTTGACAGGAAACAAACTCTTCT 58.499 37.500 0.00 0.00 0.00 2.85
3527 4887 2.135139 TGACTGAGCAAAGCGTACAAG 58.865 47.619 0.00 0.00 0.00 3.16
3563 4923 7.478322 CCTGATATCAAAAGATGACAACAAGG 58.522 38.462 6.90 0.00 41.93 3.61
3566 4926 5.945191 TGCCTGATATCAAAAGATGACAACA 59.055 36.000 6.90 0.00 41.93 3.33
3641 5001 0.696501 AAGCCATTCCCAACGTACCT 59.303 50.000 0.00 0.00 0.00 3.08
3644 5004 0.322322 ACGAAGCCATTCCCAACGTA 59.678 50.000 0.00 0.00 31.21 3.57
3663 5023 3.023832 TGGTCGATGCAGATCAGTTCTA 58.976 45.455 0.00 0.00 31.77 2.10
3699 6800 0.397941 CCTCACTGTCCTCTGCCAAA 59.602 55.000 0.00 0.00 0.00 3.28
3805 6906 2.278013 GATCTCGCCGACCGTGAC 60.278 66.667 3.11 0.00 41.56 3.67
3933 7035 1.665264 CCACCTGCATATGCGCCAAA 61.665 55.000 22.21 3.87 45.83 3.28
3934 7036 2.120282 CCACCTGCATATGCGCCAA 61.120 57.895 22.21 4.26 45.83 4.52
3954 7056 1.518056 CGATGGCAAGGCACAAGTGT 61.518 55.000 0.00 0.00 0.00 3.55
4028 7130 3.061260 GCCGTGTAGACTCCGGACC 62.061 68.421 0.00 0.00 44.41 4.46
4051 7153 0.170561 CACGGTCTCTGGTAAGTCGG 59.829 60.000 0.00 0.00 0.00 4.79
4056 7159 0.249120 CCATGCACGGTCTCTGGTAA 59.751 55.000 0.00 0.00 0.00 2.85
4067 7170 2.015627 CGCACAAAACCCATGCACG 61.016 57.895 0.00 0.00 39.39 5.34
4129 7232 1.614903 CCAAGCCAAGATCTTGCAACA 59.385 47.619 27.01 0.00 39.54 3.33
4143 7246 1.251251 ACTGAATTGTGAGCCAAGCC 58.749 50.000 0.00 0.00 36.25 4.35
4155 7258 4.753516 TGTCCATGGTCGATACTGAATT 57.246 40.909 12.58 0.00 0.00 2.17
4156 7259 4.590647 AGATGTCCATGGTCGATACTGAAT 59.409 41.667 12.58 0.00 0.00 2.57
4164 7267 2.615240 CCAACAAGATGTCCATGGTCGA 60.615 50.000 12.58 0.00 0.00 4.20
4165 7268 1.739466 CCAACAAGATGTCCATGGTCG 59.261 52.381 12.58 0.00 0.00 4.79
4169 7272 2.493278 GTTCCCCAACAAGATGTCCATG 59.507 50.000 0.00 0.00 32.14 3.66
4180 7283 0.975135 CCATGCAATGTTCCCCAACA 59.025 50.000 0.00 0.00 44.81 3.33
4181 7284 0.249955 CCCATGCAATGTTCCCCAAC 59.750 55.000 0.00 0.00 44.81 3.77
4182 7285 0.115944 TCCCATGCAATGTTCCCCAA 59.884 50.000 0.00 0.00 44.81 4.12
4183 7286 0.115944 TTCCCATGCAATGTTCCCCA 59.884 50.000 0.00 0.00 44.81 4.96
4184 7287 1.066215 GTTTCCCATGCAATGTTCCCC 60.066 52.381 0.00 0.00 44.81 4.81
4185 7288 1.066215 GGTTTCCCATGCAATGTTCCC 60.066 52.381 0.00 0.00 44.81 3.97
4186 7289 1.622811 TGGTTTCCCATGCAATGTTCC 59.377 47.619 0.00 0.00 44.81 3.62
4187 7290 3.399440 TTGGTTTCCCATGCAATGTTC 57.601 42.857 0.00 0.00 44.81 3.18
4188 7291 3.853355 TTTGGTTTCCCATGCAATGTT 57.147 38.095 0.00 0.00 44.81 2.71
4189 7292 3.853355 TTTTGGTTTCCCATGCAATGT 57.147 38.095 0.00 0.00 44.81 2.71
4190 7293 5.708877 AATTTTTGGTTTCCCATGCAATG 57.291 34.783 0.00 0.00 46.21 2.82
4191 7294 6.550481 AGAAAATTTTTGGTTTCCCATGCAAT 59.450 30.769 4.63 0.00 41.49 3.56
4192 7295 5.890419 AGAAAATTTTTGGTTTCCCATGCAA 59.110 32.000 4.63 0.00 41.49 4.08
4193 7296 5.444176 AGAAAATTTTTGGTTTCCCATGCA 58.556 33.333 4.63 0.00 41.49 3.96
4194 7297 6.347321 CGTAGAAAATTTTTGGTTTCCCATGC 60.347 38.462 4.63 0.00 41.49 4.06
4195 7298 6.347321 GCGTAGAAAATTTTTGGTTTCCCATG 60.347 38.462 4.63 0.00 41.49 3.66
4196 7299 5.699001 GCGTAGAAAATTTTTGGTTTCCCAT 59.301 36.000 4.63 0.00 41.49 4.00
4197 7300 5.051153 GCGTAGAAAATTTTTGGTTTCCCA 58.949 37.500 4.63 0.00 39.65 4.37
4198 7301 5.294356 AGCGTAGAAAATTTTTGGTTTCCC 58.706 37.500 4.63 0.00 0.00 3.97
4199 7302 5.980715 TGAGCGTAGAAAATTTTTGGTTTCC 59.019 36.000 4.63 0.00 0.00 3.13
4200 7303 6.695713 AGTGAGCGTAGAAAATTTTTGGTTTC 59.304 34.615 4.63 1.05 0.00 2.78
4201 7304 6.569780 AGTGAGCGTAGAAAATTTTTGGTTT 58.430 32.000 4.63 0.00 0.00 3.27
4202 7305 6.144078 AGTGAGCGTAGAAAATTTTTGGTT 57.856 33.333 4.63 0.00 0.00 3.67
4203 7306 5.767816 AGTGAGCGTAGAAAATTTTTGGT 57.232 34.783 4.63 1.81 0.00 3.67
4204 7307 7.581476 TCTTAGTGAGCGTAGAAAATTTTTGG 58.419 34.615 4.63 0.00 0.00 3.28
4205 7308 9.267096 GATCTTAGTGAGCGTAGAAAATTTTTG 57.733 33.333 4.63 0.00 0.00 2.44
4206 7309 8.999431 TGATCTTAGTGAGCGTAGAAAATTTTT 58.001 29.630 4.63 0.00 32.98 1.94
4207 7310 8.547967 TGATCTTAGTGAGCGTAGAAAATTTT 57.452 30.769 2.28 2.28 32.98 1.82
4208 7311 8.547967 TTGATCTTAGTGAGCGTAGAAAATTT 57.452 30.769 0.00 0.00 32.98 1.82
4209 7312 8.723942 ATTGATCTTAGTGAGCGTAGAAAATT 57.276 30.769 0.00 0.00 32.98 1.82
4210 7313 8.200792 AGATTGATCTTAGTGAGCGTAGAAAAT 58.799 33.333 0.00 0.00 31.97 1.82
4211 7314 7.548097 AGATTGATCTTAGTGAGCGTAGAAAA 58.452 34.615 0.00 0.00 31.97 2.29
4212 7315 7.101652 AGATTGATCTTAGTGAGCGTAGAAA 57.898 36.000 0.00 0.00 31.97 2.52
4213 7316 6.701145 AGATTGATCTTAGTGAGCGTAGAA 57.299 37.500 0.00 0.00 31.97 2.10
4214 7317 6.428465 CCTAGATTGATCTTAGTGAGCGTAGA 59.572 42.308 0.00 0.00 38.32 2.59
4215 7318 6.428465 TCCTAGATTGATCTTAGTGAGCGTAG 59.572 42.308 0.00 0.00 38.32 3.51
4216 7319 6.296803 TCCTAGATTGATCTTAGTGAGCGTA 58.703 40.000 0.00 0.00 38.32 4.42
4217 7320 5.133941 TCCTAGATTGATCTTAGTGAGCGT 58.866 41.667 0.00 0.00 38.32 5.07
4218 7321 5.471797 TCTCCTAGATTGATCTTAGTGAGCG 59.528 44.000 0.00 0.00 38.32 5.03
4219 7322 6.892658 TCTCCTAGATTGATCTTAGTGAGC 57.107 41.667 0.00 0.00 38.32 4.26
4220 7323 8.514594 GTCATCTCCTAGATTGATCTTAGTGAG 58.485 40.741 0.00 1.84 38.32 3.51
4221 7324 7.450014 GGTCATCTCCTAGATTGATCTTAGTGA 59.550 40.741 0.00 0.00 38.32 3.41
4222 7325 7.232330 TGGTCATCTCCTAGATTGATCTTAGTG 59.768 40.741 0.00 0.00 38.32 2.74
4223 7326 7.301420 TGGTCATCTCCTAGATTGATCTTAGT 58.699 38.462 0.00 0.00 38.32 2.24
4224 7327 7.773489 TGGTCATCTCCTAGATTGATCTTAG 57.227 40.000 0.00 0.00 38.32 2.18
4225 7328 8.176105 AGATGGTCATCTCCTAGATTGATCTTA 58.824 37.037 7.59 0.00 44.37 2.10
4226 7329 7.018150 AGATGGTCATCTCCTAGATTGATCTT 58.982 38.462 7.59 0.00 44.37 2.40
4227 7330 6.564099 AGATGGTCATCTCCTAGATTGATCT 58.436 40.000 7.59 0.00 44.37 2.75
4228 7331 6.855763 AGATGGTCATCTCCTAGATTGATC 57.144 41.667 7.59 0.00 44.37 2.92
4229 7332 6.376864 CGTAGATGGTCATCTCCTAGATTGAT 59.623 42.308 15.80 0.00 44.37 2.57
4230 7333 5.707764 CGTAGATGGTCATCTCCTAGATTGA 59.292 44.000 15.80 0.00 44.37 2.57
4231 7334 5.707764 TCGTAGATGGTCATCTCCTAGATTG 59.292 44.000 15.80 1.24 44.37 2.67
4232 7335 5.882040 TCGTAGATGGTCATCTCCTAGATT 58.118 41.667 15.80 0.00 44.37 2.40
4233 7336 5.249622 TCTCGTAGATGGTCATCTCCTAGAT 59.750 44.000 15.80 0.00 44.37 1.98
4234 7337 4.593634 TCTCGTAGATGGTCATCTCCTAGA 59.406 45.833 15.80 13.28 44.37 2.43
4235 7338 4.900684 TCTCGTAGATGGTCATCTCCTAG 58.099 47.826 15.80 11.58 44.37 3.02
4236 7339 4.263112 CCTCTCGTAGATGGTCATCTCCTA 60.263 50.000 15.80 0.00 44.37 2.94
4237 7340 3.497763 CCTCTCGTAGATGGTCATCTCCT 60.498 52.174 15.80 0.00 44.37 3.69
4238 7341 2.817258 CCTCTCGTAGATGGTCATCTCC 59.183 54.545 15.80 5.25 44.37 3.71
4239 7342 3.745799 TCCTCTCGTAGATGGTCATCTC 58.254 50.000 15.80 8.08 44.37 2.75
4241 7344 4.580995 TCTTTCCTCTCGTAGATGGTCATC 59.419 45.833 2.92 2.92 38.09 2.92
4242 7345 4.537751 TCTTTCCTCTCGTAGATGGTCAT 58.462 43.478 0.00 0.00 33.89 3.06
4243 7346 3.964411 TCTTTCCTCTCGTAGATGGTCA 58.036 45.455 0.00 0.00 33.89 4.02
4244 7347 5.285651 CAATCTTTCCTCTCGTAGATGGTC 58.714 45.833 0.00 0.00 33.89 4.02
4245 7348 4.442192 GCAATCTTTCCTCTCGTAGATGGT 60.442 45.833 0.00 0.00 33.89 3.55
4246 7349 4.054671 GCAATCTTTCCTCTCGTAGATGG 58.945 47.826 0.00 0.00 33.89 3.51
4247 7350 4.686972 TGCAATCTTTCCTCTCGTAGATG 58.313 43.478 0.00 0.00 33.89 2.90
4248 7351 5.537188 GATGCAATCTTTCCTCTCGTAGAT 58.463 41.667 0.00 0.00 41.17 1.98
4249 7352 4.938080 GATGCAATCTTTCCTCTCGTAGA 58.062 43.478 0.00 0.00 41.17 2.59
4263 7366 9.757227 GATCTATAAGGGTATGTAGATGCAATC 57.243 37.037 0.00 0.00 46.04 2.67
4264 7367 8.417106 CGATCTATAAGGGTATGTAGATGCAAT 58.583 37.037 0.00 0.00 34.85 3.56
4265 7368 7.630728 GCGATCTATAAGGGTATGTAGATGCAA 60.631 40.741 0.00 0.00 34.85 4.08
4266 7369 6.183360 GCGATCTATAAGGGTATGTAGATGCA 60.183 42.308 0.00 0.00 34.85 3.96
4267 7370 6.039941 AGCGATCTATAAGGGTATGTAGATGC 59.960 42.308 0.00 0.00 34.85 3.91
4268 7371 7.575414 AGCGATCTATAAGGGTATGTAGATG 57.425 40.000 0.00 0.00 34.85 2.90
4269 7372 9.344772 CTTAGCGATCTATAAGGGTATGTAGAT 57.655 37.037 6.09 0.00 36.79 1.98
4270 7373 7.282675 GCTTAGCGATCTATAAGGGTATGTAGA 59.717 40.741 12.90 0.00 31.07 2.59
4271 7374 7.419204 GCTTAGCGATCTATAAGGGTATGTAG 58.581 42.308 12.90 0.00 31.07 2.74
4272 7375 7.330900 GCTTAGCGATCTATAAGGGTATGTA 57.669 40.000 12.90 0.00 31.07 2.29
4273 7376 6.210287 GCTTAGCGATCTATAAGGGTATGT 57.790 41.667 12.90 0.00 31.07 2.29
4290 7393 4.515432 GTTTCATAACGATTCCGCTTAGC 58.485 43.478 0.00 0.00 39.95 3.09
4303 7406 6.476243 ACTACATCAACCACGTTTCATAAC 57.524 37.500 0.00 0.00 0.00 1.89
4304 7407 5.346551 CGACTACATCAACCACGTTTCATAA 59.653 40.000 0.00 0.00 0.00 1.90
4305 7408 4.860352 CGACTACATCAACCACGTTTCATA 59.140 41.667 0.00 0.00 0.00 2.15
4306 7409 3.678072 CGACTACATCAACCACGTTTCAT 59.322 43.478 0.00 0.00 0.00 2.57
4307 7410 3.054166 CGACTACATCAACCACGTTTCA 58.946 45.455 0.00 0.00 0.00 2.69
4308 7411 3.311106 TCGACTACATCAACCACGTTTC 58.689 45.455 0.00 0.00 0.00 2.78
4309 7412 3.374220 TCGACTACATCAACCACGTTT 57.626 42.857 0.00 0.00 0.00 3.60
4310 7413 3.054878 GTTCGACTACATCAACCACGTT 58.945 45.455 0.00 0.00 0.00 3.99
4311 7414 2.669364 GTTCGACTACATCAACCACGT 58.331 47.619 0.00 0.00 0.00 4.49
4312 7415 1.647213 CGTTCGACTACATCAACCACG 59.353 52.381 0.00 0.00 0.00 4.94
4313 7416 2.660236 GACGTTCGACTACATCAACCAC 59.340 50.000 0.00 0.00 0.00 4.16
4314 7417 2.555325 AGACGTTCGACTACATCAACCA 59.445 45.455 0.00 0.00 0.00 3.67
4315 7418 3.213249 AGACGTTCGACTACATCAACC 57.787 47.619 0.00 0.00 0.00 3.77
4316 7419 4.802664 GAAGACGTTCGACTACATCAAC 57.197 45.455 0.00 0.00 0.00 3.18
4331 7434 1.068474 GTGATTGGACCACGAAGACG 58.932 55.000 0.00 0.00 45.75 4.18
4338 7441 0.108329 ACGGATCGTGATTGGACCAC 60.108 55.000 0.00 0.00 39.18 4.16
4339 7442 0.174845 GACGGATCGTGATTGGACCA 59.825 55.000 0.00 0.00 41.37 4.02
4340 7443 0.529992 GGACGGATCGTGATTGGACC 60.530 60.000 0.00 0.00 41.37 4.46
4341 7444 0.529992 GGGACGGATCGTGATTGGAC 60.530 60.000 0.00 0.00 41.37 4.02
4342 7445 0.973496 TGGGACGGATCGTGATTGGA 60.973 55.000 0.00 0.00 41.37 3.53
4343 7446 0.810031 GTGGGACGGATCGTGATTGG 60.810 60.000 0.00 0.00 41.37 3.16
4344 7447 1.145759 CGTGGGACGGATCGTGATTG 61.146 60.000 0.00 0.00 41.37 2.67
4345 7448 1.141019 CGTGGGACGGATCGTGATT 59.859 57.895 0.00 0.00 41.37 2.57
4346 7449 1.317431 TTCGTGGGACGGATCGTGAT 61.317 55.000 0.00 0.00 41.37 3.06
4347 7450 1.972752 TTCGTGGGACGGATCGTGA 60.973 57.895 0.00 0.00 41.37 4.35
4348 7451 1.804326 GTTCGTGGGACGGATCGTG 60.804 63.158 0.00 0.00 41.37 4.35
4349 7452 1.930908 GAGTTCGTGGGACGGATCGT 61.931 60.000 0.00 0.00 45.10 3.73
4350 7453 1.226603 GAGTTCGTGGGACGGATCG 60.227 63.158 0.00 0.00 42.81 3.69
4351 7454 1.141234 GGAGTTCGTGGGACGGATC 59.859 63.158 0.00 0.00 42.81 3.36
4352 7455 1.305046 AGGAGTTCGTGGGACGGAT 60.305 57.895 0.00 0.00 42.81 4.18
4353 7456 2.116772 AGGAGTTCGTGGGACGGA 59.883 61.111 0.00 0.00 42.81 4.69
4354 7457 1.605058 ATCAGGAGTTCGTGGGACGG 61.605 60.000 0.00 0.00 42.81 4.79
4355 7458 0.179134 GATCAGGAGTTCGTGGGACG 60.179 60.000 2.40 0.00 44.19 4.79
4356 7459 0.175989 GGATCAGGAGTTCGTGGGAC 59.824 60.000 0.00 0.00 33.00 4.46
4357 7460 0.252057 TGGATCAGGAGTTCGTGGGA 60.252 55.000 0.00 0.00 33.00 4.37
4358 7461 0.613260 TTGGATCAGGAGTTCGTGGG 59.387 55.000 0.00 0.00 33.00 4.61
4359 7462 1.276421 ACTTGGATCAGGAGTTCGTGG 59.724 52.381 0.00 0.00 33.00 4.94
4360 7463 2.341257 CACTTGGATCAGGAGTTCGTG 58.659 52.381 0.00 0.00 0.00 4.35
4361 7464 1.338200 GCACTTGGATCAGGAGTTCGT 60.338 52.381 0.00 0.00 0.00 3.85
4362 7465 1.363744 GCACTTGGATCAGGAGTTCG 58.636 55.000 0.00 0.00 0.00 3.95
4363 7466 1.743996 GGCACTTGGATCAGGAGTTC 58.256 55.000 0.00 0.00 0.00 3.01
4364 7467 0.036010 CGGCACTTGGATCAGGAGTT 60.036 55.000 0.00 0.00 0.00 3.01
4365 7468 0.904865 TCGGCACTTGGATCAGGAGT 60.905 55.000 0.00 0.00 0.00 3.85
4366 7469 0.250234 TTCGGCACTTGGATCAGGAG 59.750 55.000 0.00 0.00 0.00 3.69
4367 7470 0.036388 GTTCGGCACTTGGATCAGGA 60.036 55.000 0.00 0.00 0.00 3.86
4368 7471 0.321564 TGTTCGGCACTTGGATCAGG 60.322 55.000 0.00 0.00 0.00 3.86
4369 7472 1.081892 CTGTTCGGCACTTGGATCAG 58.918 55.000 0.00 0.00 0.00 2.90
4370 7473 0.684535 TCTGTTCGGCACTTGGATCA 59.315 50.000 0.00 0.00 0.00 2.92
4371 7474 1.667724 CATCTGTTCGGCACTTGGATC 59.332 52.381 0.00 0.00 0.00 3.36
4372 7475 1.679944 CCATCTGTTCGGCACTTGGAT 60.680 52.381 0.00 0.00 0.00 3.41
4373 7476 0.321564 CCATCTGTTCGGCACTTGGA 60.322 55.000 0.00 0.00 0.00 3.53
4374 7477 2.174334 CCATCTGTTCGGCACTTGG 58.826 57.895 0.00 0.00 0.00 3.61
4381 7484 0.374758 CGAATGTGCCATCTGTTCGG 59.625 55.000 0.00 0.00 38.30 4.30
4382 7485 0.247814 GCGAATGTGCCATCTGTTCG 60.248 55.000 0.00 0.00 43.10 3.95
4383 7486 0.247814 CGCGAATGTGCCATCTGTTC 60.248 55.000 0.00 0.00 0.00 3.18
4384 7487 0.955428 ACGCGAATGTGCCATCTGTT 60.955 50.000 15.93 0.00 0.00 3.16
4385 7488 0.955428 AACGCGAATGTGCCATCTGT 60.955 50.000 15.93 0.00 0.00 3.41
4386 7489 0.247814 GAACGCGAATGTGCCATCTG 60.248 55.000 15.93 0.00 0.00 2.90
4387 7490 0.673333 TGAACGCGAATGTGCCATCT 60.673 50.000 15.93 0.00 0.00 2.90
4388 7491 0.167908 TTGAACGCGAATGTGCCATC 59.832 50.000 15.93 0.00 0.00 3.51
4389 7492 0.109781 GTTGAACGCGAATGTGCCAT 60.110 50.000 15.93 0.00 0.00 4.40
4390 7493 1.281353 GTTGAACGCGAATGTGCCA 59.719 52.632 15.93 0.00 0.00 4.92
4391 7494 0.996727 GTGTTGAACGCGAATGTGCC 60.997 55.000 15.93 0.00 0.00 5.01
4392 7495 0.316607 TGTGTTGAACGCGAATGTGC 60.317 50.000 15.93 0.00 0.00 4.57
4393 7496 1.385038 GTGTGTTGAACGCGAATGTG 58.615 50.000 15.93 0.00 0.00 3.21
4394 7497 0.306533 GGTGTGTTGAACGCGAATGT 59.693 50.000 15.93 0.00 40.40 2.71
4395 7498 0.586319 AGGTGTGTTGAACGCGAATG 59.414 50.000 15.93 0.00 40.40 2.67
4396 7499 1.796459 GTAGGTGTGTTGAACGCGAAT 59.204 47.619 15.93 0.00 40.40 3.34
4397 7500 1.210870 GTAGGTGTGTTGAACGCGAA 58.789 50.000 15.93 0.00 40.40 4.70
4398 7501 0.935831 CGTAGGTGTGTTGAACGCGA 60.936 55.000 15.93 0.00 40.40 5.87
4399 7502 0.935831 TCGTAGGTGTGTTGAACGCG 60.936 55.000 3.53 3.53 40.40 6.01
4400 7503 0.505655 GTCGTAGGTGTGTTGAACGC 59.494 55.000 1.20 1.20 38.65 4.84
4401 7504 2.129823 AGTCGTAGGTGTGTTGAACG 57.870 50.000 0.00 0.00 34.99 3.95
4402 7505 3.450578 TCAAGTCGTAGGTGTGTTGAAC 58.549 45.455 0.00 0.00 0.00 3.18
4403 7506 3.804786 TCAAGTCGTAGGTGTGTTGAA 57.195 42.857 0.00 0.00 0.00 2.69
4404 7507 3.319689 TCATCAAGTCGTAGGTGTGTTGA 59.680 43.478 0.00 0.00 0.00 3.18
4405 7508 3.428870 GTCATCAAGTCGTAGGTGTGTTG 59.571 47.826 0.00 0.00 0.00 3.33
4406 7509 3.650139 GTCATCAAGTCGTAGGTGTGTT 58.350 45.455 0.00 0.00 0.00 3.32
4407 7510 2.351447 CGTCATCAAGTCGTAGGTGTGT 60.351 50.000 0.00 0.00 0.00 3.72
4408 7511 2.251040 CGTCATCAAGTCGTAGGTGTG 58.749 52.381 0.00 0.00 0.00 3.82
4409 7512 1.402456 GCGTCATCAAGTCGTAGGTGT 60.402 52.381 0.00 0.00 0.00 4.16
4410 7513 1.135373 AGCGTCATCAAGTCGTAGGTG 60.135 52.381 0.00 0.00 0.00 4.00
4411 7514 1.174783 AGCGTCATCAAGTCGTAGGT 58.825 50.000 0.00 0.00 0.00 3.08
4412 7515 2.279582 AAGCGTCATCAAGTCGTAGG 57.720 50.000 0.00 0.00 0.00 3.18
4413 7516 3.059570 GTGAAAGCGTCATCAAGTCGTAG 59.940 47.826 0.00 0.00 38.90 3.51
4414 7517 2.984471 GTGAAAGCGTCATCAAGTCGTA 59.016 45.455 0.00 0.00 38.90 3.43
4415 7518 1.792949 GTGAAAGCGTCATCAAGTCGT 59.207 47.619 0.00 0.00 38.90 4.34
4416 7519 1.126846 GGTGAAAGCGTCATCAAGTCG 59.873 52.381 0.00 0.00 37.32 4.18
4417 7520 2.413453 GAGGTGAAAGCGTCATCAAGTC 59.587 50.000 6.49 0.00 40.16 3.01
4418 7521 2.417719 GAGGTGAAAGCGTCATCAAGT 58.582 47.619 6.49 0.00 40.16 3.16
4419 7522 1.734465 GGAGGTGAAAGCGTCATCAAG 59.266 52.381 6.49 0.00 40.16 3.02
4420 7523 1.347707 AGGAGGTGAAAGCGTCATCAA 59.652 47.619 6.49 0.00 40.16 2.57
4421 7524 0.976641 AGGAGGTGAAAGCGTCATCA 59.023 50.000 6.49 0.00 40.16 3.07
4422 7525 1.066858 TGAGGAGGTGAAAGCGTCATC 60.067 52.381 0.00 0.00 40.95 2.92
4423 7526 0.976641 TGAGGAGGTGAAAGCGTCAT 59.023 50.000 0.00 0.00 40.95 3.06
4424 7527 0.756294 TTGAGGAGGTGAAAGCGTCA 59.244 50.000 0.00 0.00 40.95 4.35
4425 7528 2.003301 GATTGAGGAGGTGAAAGCGTC 58.997 52.381 0.00 0.00 40.95 5.19
4426 7529 1.339151 GGATTGAGGAGGTGAAAGCGT 60.339 52.381 0.00 0.00 40.95 5.07
4427 7530 1.339055 TGGATTGAGGAGGTGAAAGCG 60.339 52.381 0.00 0.00 40.95 4.68
4428 7531 2.363683 CTGGATTGAGGAGGTGAAAGC 58.636 52.381 0.00 0.00 0.00 3.51
4429 7532 2.363683 GCTGGATTGAGGAGGTGAAAG 58.636 52.381 0.00 0.00 0.00 2.62
4430 7533 1.339055 CGCTGGATTGAGGAGGTGAAA 60.339 52.381 0.00 0.00 0.00 2.69
4431 7534 0.250234 CGCTGGATTGAGGAGGTGAA 59.750 55.000 0.00 0.00 0.00 3.18
4432 7535 1.900351 CGCTGGATTGAGGAGGTGA 59.100 57.895 0.00 0.00 0.00 4.02
4433 7536 4.528674 CGCTGGATTGAGGAGGTG 57.471 61.111 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.