Multiple sequence alignment - TraesCS1D01G111000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G111000 chr1D 100.000 6689 0 0 1 6689 106244251 106237563 0.000000e+00 12353.0
1 TraesCS1D01G111000 chr1D 90.909 209 13 5 1352 1557 139539160 139539365 6.610000e-70 276.0
2 TraesCS1D01G111000 chr1D 92.391 92 4 3 1477 1567 114006246 114006335 1.960000e-25 128.0
3 TraesCS1D01G111000 chr1D 88.889 90 7 1 5123 5212 106239039 106238953 2.550000e-19 108.0
4 TraesCS1D01G111000 chr1D 88.889 90 7 1 5213 5299 106239129 106239040 2.550000e-19 108.0
5 TraesCS1D01G111000 chr1A 96.419 1899 63 4 1427 3324 107102597 107104491 0.000000e+00 3125.0
6 TraesCS1D01G111000 chr1A 94.079 1385 70 10 1 1382 107101221 107102596 0.000000e+00 2093.0
7 TraesCS1D01G111000 chr1A 96.536 1068 19 6 4215 5277 107105154 107106208 0.000000e+00 1751.0
8 TraesCS1D01G111000 chr1A 92.229 785 26 14 5242 6020 107106207 107106962 0.000000e+00 1079.0
9 TraesCS1D01G111000 chr1A 92.898 704 29 10 3370 4069 107104485 107105171 0.000000e+00 1003.0
10 TraesCS1D01G111000 chr1A 91.473 645 28 9 6056 6689 107107197 107107825 0.000000e+00 861.0
11 TraesCS1D01G111000 chr1A 89.806 206 15 5 1355 1557 67828014 67827812 6.650000e-65 259.0
12 TraesCS1D01G111000 chr1A 90.698 129 8 4 1349 1476 7340230 7340355 1.150000e-37 169.0
13 TraesCS1D01G111000 chr1A 95.238 84 3 1 1477 1559 517045242 517045159 1.510000e-26 132.0
14 TraesCS1D01G111000 chr1A 92.391 92 4 3 1477 1566 155914758 155914668 1.960000e-25 128.0
15 TraesCS1D01G111000 chr1A 92.391 92 4 3 1477 1566 447117654 447117744 1.960000e-25 128.0
16 TraesCS1D01G111000 chr1A 88.889 90 7 1 5213 5299 107106051 107106140 2.550000e-19 108.0
17 TraesCS1D01G111000 chr1B 93.287 1713 94 10 1601 3305 161204772 161206471 0.000000e+00 2507.0
18 TraesCS1D01G111000 chr1B 93.806 1227 57 10 372 1596 161203516 161204725 0.000000e+00 1827.0
19 TraesCS1D01G111000 chr1B 92.864 1051 33 14 4245 5277 161207847 161208873 0.000000e+00 1487.0
20 TraesCS1D01G111000 chr1B 92.222 900 43 14 5242 6130 161208872 161209755 0.000000e+00 1249.0
21 TraesCS1D01G111000 chr1B 94.358 514 15 5 6190 6689 161209756 161210269 0.000000e+00 776.0
22 TraesCS1D01G111000 chr1B 94.512 328 15 2 1 328 161203186 161203510 2.780000e-138 503.0
23 TraesCS1D01G111000 chr1B 91.129 372 25 6 3503 3867 161206548 161206918 1.300000e-136 497.0
24 TraesCS1D01G111000 chr1B 94.675 169 4 3 4053 4216 200229110 200229278 2.390000e-64 257.0
25 TraesCS1D01G111000 chr1B 85.581 215 14 8 3866 4068 161207077 161207286 6.800000e-50 209.0
26 TraesCS1D01G111000 chr1B 84.793 217 23 7 1349 1559 374320746 374320958 6.800000e-50 209.0
27 TraesCS1D01G111000 chr1B 96.970 99 3 0 4215 4313 161207270 161207368 4.150000e-37 167.0
28 TraesCS1D01G111000 chr1B 89.623 106 6 4 1477 1578 39685550 39685446 5.440000e-26 130.0
29 TraesCS1D01G111000 chr1B 87.500 112 10 4 1477 1586 540278915 540278806 7.040000e-25 126.0
30 TraesCS1D01G111000 chr1B 88.235 68 8 0 5123 5190 161208806 161208873 1.550000e-11 82.4
31 TraesCS1D01G111000 chr6B 83.133 415 59 10 2882 3292 544894627 544894220 1.060000e-97 368.0
32 TraesCS1D01G111000 chr6B 94.083 169 5 3 4053 4216 41246685 41246853 1.110000e-62 252.0
33 TraesCS1D01G111000 chr6B 97.541 122 1 1 3384 3503 343030820 343030941 2.440000e-49 207.0
34 TraesCS1D01G111000 chr3D 97.436 156 0 2 4068 4219 438773757 438773912 5.140000e-66 263.0
35 TraesCS1D01G111000 chr3D 81.073 317 54 5 2910 3222 281332363 281332049 1.440000e-61 248.0
36 TraesCS1D01G111000 chr3D 80.685 321 51 9 2910 3224 333754178 333753863 8.670000e-59 239.0
37 TraesCS1D01G111000 chr3D 97.541 122 0 2 3384 3503 329442717 329442597 8.790000e-49 206.0
38 TraesCS1D01G111000 chr3D 87.413 143 15 3 1334 1476 172594930 172595069 1.930000e-35 161.0
39 TraesCS1D01G111000 chr4A 96.296 162 1 3 4068 4224 19174648 19174487 1.850000e-65 261.0
40 TraesCS1D01G111000 chr4A 94.675 169 4 3 4053 4216 49208187 49208355 2.390000e-64 257.0
41 TraesCS1D01G111000 chr4A 90.909 132 9 3 1345 1476 358835161 358835289 2.480000e-39 174.0
42 TraesCS1D01G111000 chr4A 94.318 88 3 2 1477 1563 582638013 582637927 4.210000e-27 134.0
43 TraesCS1D01G111000 chr4A 90.196 102 7 2 1459 1557 611113994 611114095 5.440000e-26 130.0
44 TraesCS1D01G111000 chr7D 95.706 163 3 2 4068 4226 511569060 511568898 6.650000e-65 259.0
45 TraesCS1D01G111000 chr7D 92.000 125 7 3 1352 1476 487756487 487756608 8.920000e-39 172.0
46 TraesCS1D01G111000 chr5B 93.605 172 6 3 4053 4219 206998358 206998187 1.110000e-62 252.0
47 TraesCS1D01G111000 chr5B 93.525 139 6 2 3367 3503 305587446 305587583 3.160000e-48 204.0
48 TraesCS1D01G111000 chr5B 95.276 127 2 3 3384 3508 291065107 291064983 1.470000e-46 198.0
49 TraesCS1D01G111000 chr2B 93.143 175 6 4 4041 4210 154991780 154991953 1.110000e-62 252.0
50 TraesCS1D01G111000 chr2B 95.625 160 2 3 4065 4219 663334114 663333955 1.110000e-62 252.0
51 TraesCS1D01G111000 chr4B 88.725 204 13 6 1361 1557 73266136 73265936 2.410000e-59 241.0
52 TraesCS1D01G111000 chr4B 87.317 205 21 5 1352 1555 645076682 645076882 5.220000e-56 230.0
53 TraesCS1D01G111000 chr4B 92.000 125 7 3 1352 1476 590695439 590695560 8.920000e-39 172.0
54 TraesCS1D01G111000 chr4B 90.698 129 9 1 1348 1476 642497112 642497237 1.150000e-37 169.0
55 TraesCS1D01G111000 chr4B 95.294 85 3 1 1477 1560 295676314 295676230 4.210000e-27 134.0
56 TraesCS1D01G111000 chr4B 92.553 94 5 2 1477 1569 666162484 666162576 4.210000e-27 134.0
57 TraesCS1D01G111000 chr4B 92.553 94 5 2 1477 1569 666170618 666170710 4.210000e-27 134.0
58 TraesCS1D01G111000 chr4B 94.253 87 3 2 1477 1562 248167390 248167305 1.510000e-26 132.0
59 TraesCS1D01G111000 chr6A 93.252 163 8 2 1392 1551 9480677 9480839 3.120000e-58 237.0
60 TraesCS1D01G111000 chr6A 89.706 136 10 4 1347 1482 410906454 410906323 3.210000e-38 171.0
61 TraesCS1D01G111000 chr6A 94.186 86 3 2 1477 1561 104521903 104521987 5.440000e-26 130.0
62 TraesCS1D01G111000 chr7A 79.751 321 55 8 2910 3224 693621093 693621409 2.430000e-54 224.0
63 TraesCS1D01G111000 chr7A 79.624 319 59 5 2910 3224 711604879 711605195 2.430000e-54 224.0
64 TraesCS1D01G111000 chr7A 97.500 120 2 1 3384 3503 200036666 200036548 3.160000e-48 204.0
65 TraesCS1D01G111000 chr2D 79.495 317 58 6 2910 3222 190629849 190629536 1.130000e-52 219.0
66 TraesCS1D01G111000 chr2D 90.909 132 7 5 1347 1476 136976379 136976507 8.920000e-39 172.0
67 TraesCS1D01G111000 chr2D 90.909 132 7 5 1352 1482 453735428 453735301 8.920000e-39 172.0
68 TraesCS1D01G111000 chr6D 96.063 127 1 3 3384 3508 448710509 448710385 3.160000e-48 204.0
69 TraesCS1D01G111000 chr6D 91.603 131 8 3 1352 1482 65055867 65055994 1.920000e-40 178.0
70 TraesCS1D01G111000 chr6D 96.341 82 2 1 1477 1557 448710454 448710373 4.210000e-27 134.0
71 TraesCS1D01G111000 chr6D 91.398 93 6 2 1477 1568 113507328 113507419 7.040000e-25 126.0
72 TraesCS1D01G111000 chr5A 95.276 127 2 3 3384 3508 518841887 518841763 1.470000e-46 198.0
73 TraesCS1D01G111000 chr3B 95.276 127 2 3 3384 3508 236507854 236507978 1.470000e-46 198.0
74 TraesCS1D01G111000 chr3A 89.362 141 11 4 1343 1482 177922070 177921933 2.480000e-39 174.0
75 TraesCS1D01G111000 chr4D 92.000 125 7 3 1352 1476 93830046 93830167 8.920000e-39 172.0
76 TraesCS1D01G111000 chr4D 91.270 126 8 3 1351 1476 83143559 83143681 1.150000e-37 169.0
77 TraesCS1D01G111000 chr4D 88.889 135 11 4 1348 1482 295023014 295022884 5.370000e-36 163.0
78 TraesCS1D01G111000 chr4D 87.413 143 14 4 1340 1482 366769795 366769657 1.930000e-35 161.0
79 TraesCS1D01G111000 chr4D 94.186 86 3 2 1477 1560 152007913 152007828 5.440000e-26 130.0
80 TraesCS1D01G111000 chr4D 95.181 83 3 1 1477 1558 335316647 335316729 5.440000e-26 130.0
81 TraesCS1D01G111000 chr4D 94.186 86 3 2 1477 1561 366766557 366766473 5.440000e-26 130.0
82 TraesCS1D01G111000 chr4D 95.181 83 3 1 1477 1558 439678668 439678750 5.440000e-26 130.0
83 TraesCS1D01G111000 chrUn 91.339 127 8 3 1351 1477 29591 29714 3.210000e-38 171.0
84 TraesCS1D01G111000 chrUn 90.152 132 10 3 1351 1482 87050787 87050659 1.150000e-37 169.0
85 TraesCS1D01G111000 chrUn 90.152 132 10 3 1351 1482 419797223 419797095 1.150000e-37 169.0
86 TraesCS1D01G111000 chrUn 90.152 132 10 3 1351 1482 435604262 435604134 1.150000e-37 169.0
87 TraesCS1D01G111000 chrUn 90.076 131 10 3 1352 1482 17585401 17585274 4.150000e-37 167.0
88 TraesCS1D01G111000 chrUn 90.625 128 9 3 1352 1479 27369918 27369794 4.150000e-37 167.0
89 TraesCS1D01G111000 chrUn 90.076 131 10 3 1352 1482 217443068 217442941 4.150000e-37 167.0
90 TraesCS1D01G111000 chrUn 90.076 131 10 3 1352 1482 217449865 217449738 4.150000e-37 167.0
91 TraesCS1D01G111000 chrUn 91.200 125 8 3 1352 1476 442546698 442546819 4.150000e-37 167.0
92 TraesCS1D01G111000 chrUn 95.122 82 3 1 1477 1557 1035771 1035690 1.960000e-25 128.0
93 TraesCS1D01G111000 chrUn 95.122 82 3 1 1477 1557 17582177 17582096 1.960000e-25 128.0
94 TraesCS1D01G111000 chrUn 95.122 82 3 1 1477 1557 86972363 86972282 1.960000e-25 128.0
95 TraesCS1D01G111000 chrUn 94.118 85 3 2 1477 1559 219163552 219163468 1.960000e-25 128.0
96 TraesCS1D01G111000 chrUn 95.122 82 3 1 1477 1557 349855720 349855639 1.960000e-25 128.0
97 TraesCS1D01G111000 chrUn 95.122 82 3 1 1477 1557 356902496 356902577 1.960000e-25 128.0
98 TraesCS1D01G111000 chrUn 94.118 85 3 2 1477 1559 379792307 379792391 1.960000e-25 128.0
99 TraesCS1D01G111000 chrUn 95.122 82 3 1 1477 1557 406809042 406809123 1.960000e-25 128.0
100 TraesCS1D01G111000 chrUn 94.118 85 4 1 1477 1560 468867954 468867870 1.960000e-25 128.0
101 TraesCS1D01G111000 chr2A 88.991 109 6 6 1477 1581 578390561 578390455 5.440000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G111000 chr1D 106237563 106244251 6688 True 12353.000000 12353 100.000000 1 6689 1 chr1D.!!$R1 6688
1 TraesCS1D01G111000 chr1A 107101221 107107825 6604 False 1431.428571 3125 93.217571 1 6689 7 chr1A.!!$F3 6688
2 TraesCS1D01G111000 chr1B 161203186 161210269 7083 False 930.440000 2507 92.296400 1 6689 10 chr1B.!!$F3 6688

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
344 345 0.459899 ATTCTCGTCGTGCTATGCCA 59.540 50.000 0.0 0.0 0.00 4.92 F
1388 1393 0.621082 TCAACAACACACCTGGTCCA 59.379 50.000 0.0 0.0 0.00 4.02 F
1389 1394 0.738389 CAACAACACACCTGGTCCAC 59.262 55.000 0.0 0.0 0.00 4.02 F
1390 1395 0.746563 AACAACACACCTGGTCCACG 60.747 55.000 0.0 0.0 0.00 4.94 F
2060 2107 1.066605 GTGATGGCTGGTGATGCATTC 59.933 52.381 0.0 0.0 0.00 2.67 F
3434 3528 0.892755 CATGTGCCAAAGCCATGAGT 59.107 50.000 0.0 0.0 44.14 3.41 F
4090 4364 0.178992 TGGACAGGGTTGGAAGCTTG 60.179 55.000 2.1 0.0 39.12 4.01 F
4108 4382 0.179037 TGCTATCCATGTGCCAGAGC 60.179 55.000 0.0 0.0 40.48 4.09 F
4116 4390 0.330604 ATGTGCCAGAGCCATGAGTT 59.669 50.000 0.0 0.0 38.69 3.01 F
4117 4391 0.607217 TGTGCCAGAGCCATGAGTTG 60.607 55.000 0.0 0.0 38.69 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2323 2370 0.181114 TCCCATCAATCTCTTGGCCG 59.819 55.000 0.00 0.0 32.95 6.13 R
3051 3099 0.670162 GGCTACGTACGGCTTATCCA 59.330 55.000 21.06 0.0 34.01 3.41 R
3362 3456 1.001764 CCAACTCATGGCTCTGGCA 60.002 57.895 0.00 0.0 43.80 4.92 R
3363 3457 3.915575 CCAACTCATGGCTCTGGC 58.084 61.111 0.00 0.0 43.80 4.85 R
3510 3604 0.101399 CGTGGGAGAGAGGATTCGTG 59.899 60.000 0.00 0.0 0.00 4.35 R
4760 5595 3.031417 TAGCTTCTTCCCCGCCTGC 62.031 63.158 0.00 0.0 0.00 4.85 R
5445 6320 0.033228 CAGCACGATCATCCCTCCTC 59.967 60.000 0.00 0.0 0.00 3.71 R
5654 6529 0.038744 AGGGCTCATTCTGTTGGTGG 59.961 55.000 0.00 0.0 0.00 4.61 R
5659 6534 0.548510 GGGCTAGGGCTCATTCTGTT 59.451 55.000 0.00 0.0 39.12 3.16 R
5791 6693 0.874607 GAGGCATAACGCGAACCGAT 60.875 55.000 15.93 0.0 43.84 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 1.856807 GCTCGTTTCTCGGATCTCGTC 60.857 57.143 0.00 0.00 40.32 4.20
55 56 4.821589 CCTCTTCTCCCGTGCCGC 62.822 72.222 0.00 0.00 0.00 6.53
80 81 1.626654 CGGCTTGATTCTGTTCGCGT 61.627 55.000 5.77 0.00 0.00 6.01
211 212 3.838565 TCCACCTTTTCATTTGGTAGCA 58.161 40.909 0.00 0.00 32.13 3.49
231 232 6.625532 AGCATTTTGATAGGTTTGGGAAAT 57.374 33.333 0.00 0.00 0.00 2.17
245 246 1.334149 GGGAAATATTCGCGCTTGCTC 60.334 52.381 5.56 0.00 36.08 4.26
257 258 1.787847 CTTGCTCGGGTTTAGCGTG 59.212 57.895 0.00 0.00 43.11 5.34
276 277 0.727398 GCTACGGCTTTGGTGATGTC 59.273 55.000 0.00 0.00 35.22 3.06
289 290 2.086869 GTGATGTCTGATTGGTGGTGG 58.913 52.381 0.00 0.00 0.00 4.61
306 307 2.564947 GGTGGTCTCAGTGTTCATCTCT 59.435 50.000 0.00 0.00 0.00 3.10
307 308 3.367910 GGTGGTCTCAGTGTTCATCTCTC 60.368 52.174 0.00 0.00 0.00 3.20
309 310 3.897505 TGGTCTCAGTGTTCATCTCTCAA 59.102 43.478 0.00 0.00 0.00 3.02
310 311 4.344968 TGGTCTCAGTGTTCATCTCTCAAA 59.655 41.667 0.00 0.00 0.00 2.69
311 312 4.688413 GGTCTCAGTGTTCATCTCTCAAAC 59.312 45.833 0.00 0.00 0.00 2.93
315 316 6.481313 TCTCAGTGTTCATCTCTCAAACAAAG 59.519 38.462 0.00 0.00 34.90 2.77
316 317 6.348498 TCAGTGTTCATCTCTCAAACAAAGA 58.652 36.000 0.00 0.00 34.90 2.52
318 319 7.500227 TCAGTGTTCATCTCTCAAACAAAGATT 59.500 33.333 0.00 0.00 34.90 2.40
319 320 8.133627 CAGTGTTCATCTCTCAAACAAAGATTT 58.866 33.333 0.00 0.00 34.90 2.17
320 321 8.348507 AGTGTTCATCTCTCAAACAAAGATTTC 58.651 33.333 0.00 0.00 34.90 2.17
321 322 8.131100 GTGTTCATCTCTCAAACAAAGATTTCA 58.869 33.333 0.00 0.00 34.90 2.69
322 323 8.347771 TGTTCATCTCTCAAACAAAGATTTCAG 58.652 33.333 0.00 0.00 30.39 3.02
344 345 0.459899 ATTCTCGTCGTGCTATGCCA 59.540 50.000 0.00 0.00 0.00 4.92
349 350 0.647410 CGTCGTGCTATGCCAGAAAG 59.353 55.000 0.00 0.00 0.00 2.62
354 355 3.623060 TCGTGCTATGCCAGAAAGAAATC 59.377 43.478 0.00 0.00 0.00 2.17
361 362 6.238759 GCTATGCCAGAAAGAAATCGGTATTT 60.239 38.462 0.00 0.00 38.03 1.40
368 369 6.524586 CAGAAAGAAATCGGTATTTGAGTTGC 59.475 38.462 0.00 0.00 35.41 4.17
370 371 5.551760 AGAAATCGGTATTTGAGTTGCTG 57.448 39.130 0.00 0.00 35.41 4.41
402 404 7.494211 TGGGAAGCATAATTTGATCTTCAATG 58.506 34.615 0.00 0.00 36.11 2.82
476 478 6.545298 AGAGGGCAAATCTAGCTTATTTTGAG 59.455 38.462 15.18 0.00 32.17 3.02
581 583 2.916716 GGTGCAGCATGTTATGAAAACG 59.083 45.455 11.86 0.00 39.31 3.60
654 657 2.092429 TCTTGGTGCATACTTGGATCCC 60.092 50.000 9.90 0.00 0.00 3.85
656 659 0.846693 GGTGCATACTTGGATCCCCT 59.153 55.000 9.90 0.00 0.00 4.79
696 699 6.882610 TGTGTGCTCAATCTTCTATTGTTT 57.117 33.333 0.00 0.00 0.00 2.83
733 736 8.686334 ACTTTTGGCAGTGAGTTAATAATATGG 58.314 33.333 0.00 0.00 0.00 2.74
806 809 1.353091 ATTATCTTCCGCCTCCTCCC 58.647 55.000 0.00 0.00 0.00 4.30
847 850 2.957402 TTCAATGTGACTCCCTTGCT 57.043 45.000 0.00 0.00 0.00 3.91
856 859 3.437049 GTGACTCCCTTGCTGTTTGTATC 59.563 47.826 0.00 0.00 0.00 2.24
961 965 9.290988 TGTCTTTGTTCTACAATATTTTGGCTA 57.709 29.630 0.89 0.00 38.00 3.93
985 989 3.971150 TGCCTTAACGTGGTCAATTTTG 58.029 40.909 0.00 0.00 0.00 2.44
1008 1012 0.674581 TGCAGTTCAAGATGCCTCGG 60.675 55.000 0.00 0.00 41.85 4.63
1388 1393 0.621082 TCAACAACACACCTGGTCCA 59.379 50.000 0.00 0.00 0.00 4.02
1389 1394 0.738389 CAACAACACACCTGGTCCAC 59.262 55.000 0.00 0.00 0.00 4.02
1390 1395 0.746563 AACAACACACCTGGTCCACG 60.747 55.000 0.00 0.00 0.00 4.94
1406 1411 3.078836 CGGCCCGGGTAAAGGAGA 61.079 66.667 24.63 0.00 0.00 3.71
1544 1549 1.068264 GGACTAAGGCTTTGTTGCTGC 60.068 52.381 15.24 2.79 0.00 5.25
1577 1582 6.147437 TGTATGGGTCAATTTAGGTTCCTT 57.853 37.500 0.00 0.00 0.00 3.36
1689 1736 5.374071 ACTTTCGGTAGAGGTGTCATTTTT 58.626 37.500 0.00 0.00 0.00 1.94
1773 1820 3.477530 AGCAAGCTTCGGAAGTTTAAGT 58.522 40.909 17.66 4.89 30.35 2.24
1805 1852 4.291540 TGCGGCATAATCTGTTGATTTC 57.708 40.909 0.00 0.00 42.37 2.17
1848 1895 1.070038 GTGTTGCCAATTTGCCATCG 58.930 50.000 0.00 0.00 0.00 3.84
1858 1905 1.753930 TTTGCCATCGCATGTCAGAT 58.246 45.000 0.00 0.00 46.67 2.90
1887 1934 6.810182 CCTTTCCAGCTTTGACTTGAATAATG 59.190 38.462 0.00 0.00 0.00 1.90
1959 2006 2.806382 GCCTTTGGTGGAAATTGGTGTG 60.806 50.000 0.00 0.00 0.00 3.82
1996 2043 5.464168 ACAGAAGATTTTGGCGATTCTTTG 58.536 37.500 0.00 5.74 0.00 2.77
2060 2107 1.066605 GTGATGGCTGGTGATGCATTC 59.933 52.381 0.00 0.00 0.00 2.67
2190 2237 5.126067 CCGTGATTTCCATGTTCTATTCCT 58.874 41.667 0.00 0.00 0.00 3.36
2243 2290 8.133024 TGTTAGATTTTTCATGTTAAGCCCAT 57.867 30.769 0.00 0.00 0.00 4.00
2399 2446 7.393551 AGCTTTTGTTGTTTATGAATGTTCG 57.606 32.000 0.00 0.00 0.00 3.95
2475 2522 4.832248 TGAAAATTCTCCTCTACGCACAT 58.168 39.130 0.00 0.00 0.00 3.21
2516 2563 3.492311 AAATTGTGCCCGCGCGTTT 62.492 52.632 29.95 17.32 38.08 3.60
2520 2567 4.398598 GTGCCCGCGCGTTTCATT 62.399 61.111 29.95 0.00 38.08 2.57
2543 2591 1.067516 AGAAACAAATGCTTGCACGCT 59.932 42.857 16.80 0.00 35.84 5.07
2612 2660 3.260380 CCAATGGTGGCCAAGTTATCAAA 59.740 43.478 7.24 0.00 38.35 2.69
2699 2747 3.134623 ACACCGATTATCATGGAGCAGAA 59.865 43.478 0.00 0.00 0.00 3.02
2716 2764 6.017440 GGAGCAGAACACAATGTAGTTAAACA 60.017 38.462 2.23 0.00 0.00 2.83
2828 2876 7.148239 GGATGATGAACCTTGTTAAGATTCGTT 60.148 37.037 0.00 0.00 0.00 3.85
2884 2932 6.423182 TGCAGTAGGTAGGCTATGAATTTTT 58.577 36.000 0.00 0.00 0.00 1.94
2929 2977 5.963586 GGAAAGTTACACAAAACTCTTGTCG 59.036 40.000 0.00 0.00 38.76 4.35
2932 2980 7.781548 AAGTTACACAAAACTCTTGTCGTAT 57.218 32.000 0.00 0.00 38.76 3.06
3035 3083 1.274728 AGATTGACAGAGCGAGCAAGT 59.725 47.619 0.00 0.00 0.00 3.16
3051 3099 2.282887 GTTGGGGTTCATGGCGGT 60.283 61.111 0.00 0.00 0.00 5.68
3163 3213 3.955101 CCGTCTCTAGCTCCCGCG 61.955 72.222 0.00 0.00 42.32 6.46
3321 3415 1.563924 AAACACCTGCATCATGCCAT 58.436 45.000 7.30 0.00 44.23 4.40
3353 3447 5.818136 ATTTAATTGGGTCATGTCTCACG 57.182 39.130 0.00 0.00 0.00 4.35
3354 3448 4.545208 TTAATTGGGTCATGTCTCACGA 57.455 40.909 0.00 0.00 0.00 4.35
3355 3449 3.417069 AATTGGGTCATGTCTCACGAA 57.583 42.857 0.00 0.00 0.00 3.85
3356 3450 3.634397 ATTGGGTCATGTCTCACGAAT 57.366 42.857 0.00 0.00 0.00 3.34
3357 3451 3.417069 TTGGGTCATGTCTCACGAATT 57.583 42.857 0.00 0.00 0.00 2.17
3358 3452 2.972625 TGGGTCATGTCTCACGAATTC 58.027 47.619 0.00 0.00 0.00 2.17
3359 3453 2.567169 TGGGTCATGTCTCACGAATTCT 59.433 45.455 3.52 0.00 0.00 2.40
3360 3454 3.007940 TGGGTCATGTCTCACGAATTCTT 59.992 43.478 3.52 0.00 0.00 2.52
3361 3455 4.221924 TGGGTCATGTCTCACGAATTCTTA 59.778 41.667 3.52 0.00 0.00 2.10
3362 3456 5.104941 TGGGTCATGTCTCACGAATTCTTAT 60.105 40.000 3.52 0.00 0.00 1.73
3363 3457 5.235186 GGGTCATGTCTCACGAATTCTTATG 59.765 44.000 3.52 0.00 0.00 1.90
3364 3458 5.277058 GGTCATGTCTCACGAATTCTTATGC 60.277 44.000 3.52 0.00 0.00 3.14
3365 3459 4.811024 TCATGTCTCACGAATTCTTATGCC 59.189 41.667 3.52 0.00 0.00 4.40
3366 3460 4.200838 TGTCTCACGAATTCTTATGCCA 57.799 40.909 3.52 0.00 0.00 4.92
3367 3461 4.183865 TGTCTCACGAATTCTTATGCCAG 58.816 43.478 3.52 0.00 0.00 4.85
3368 3462 4.081697 TGTCTCACGAATTCTTATGCCAGA 60.082 41.667 3.52 0.00 0.00 3.86
3408 3502 2.978010 CGGGTGCGTGGAAGCTTT 60.978 61.111 0.00 0.00 38.13 3.51
3424 3518 1.477700 GCTTTGCTATCCATGTGCCAA 59.522 47.619 0.00 0.00 0.00 4.52
3434 3528 0.892755 CATGTGCCAAAGCCATGAGT 59.107 50.000 0.00 0.00 44.14 3.41
3503 3597 1.960689 TGGGACTAAAGGCTTTGTTGC 59.039 47.619 22.32 13.13 0.00 4.17
3504 3598 1.960689 GGGACTAAAGGCTTTGTTGCA 59.039 47.619 22.32 0.81 34.04 4.08
3505 3599 2.562738 GGGACTAAAGGCTTTGTTGCAT 59.437 45.455 22.32 1.37 34.04 3.96
3506 3600 3.578688 GGACTAAAGGCTTTGTTGCATG 58.421 45.455 22.32 6.24 34.04 4.06
3508 3602 4.229876 GACTAAAGGCTTTGTTGCATGTC 58.770 43.478 22.32 13.24 34.04 3.06
3510 3604 3.375782 AAAGGCTTTGTTGCATGTCTC 57.624 42.857 12.53 0.00 34.04 3.36
3708 3804 6.785191 TCAGCTGTTTTAATCGGATCATTTC 58.215 36.000 14.67 0.00 0.00 2.17
3738 3834 1.879575 TTCCTCCATGAATCTCGGGT 58.120 50.000 0.00 0.00 0.00 5.28
3739 3835 1.414158 TCCTCCATGAATCTCGGGTC 58.586 55.000 0.00 0.00 0.00 4.46
3811 3911 4.274459 GGCACTTATTGATTTCAGATCGCT 59.726 41.667 0.00 0.00 0.00 4.93
3831 3931 7.566760 TCGCTGACATTTATAAATTGGTGAT 57.433 32.000 8.01 0.00 0.00 3.06
3832 3932 7.416817 TCGCTGACATTTATAAATTGGTGATG 58.583 34.615 8.01 0.04 0.00 3.07
3839 3939 9.995003 ACATTTATAAATTGGTGATGTTGTGTT 57.005 25.926 8.01 0.00 0.00 3.32
3958 4220 2.432510 CAGGTAGTGAGTTGGATCCCTC 59.567 54.545 9.90 10.13 0.00 4.30
3999 4272 1.339727 GGATTTACTGACCGCCCAAGT 60.340 52.381 0.00 0.00 0.00 3.16
4069 4343 6.096423 TGTCGACTTATTACTAATGGACTGCT 59.904 38.462 17.92 0.00 0.00 4.24
4070 4344 7.283807 TGTCGACTTATTACTAATGGACTGCTA 59.716 37.037 17.92 0.00 0.00 3.49
4071 4345 8.298140 GTCGACTTATTACTAATGGACTGCTAT 58.702 37.037 8.70 0.00 0.00 2.97
4072 4346 8.297426 TCGACTTATTACTAATGGACTGCTATG 58.703 37.037 0.00 0.00 0.00 2.23
4073 4347 7.542477 CGACTTATTACTAATGGACTGCTATGG 59.458 40.741 0.00 0.00 0.00 2.74
4074 4348 8.492415 ACTTATTACTAATGGACTGCTATGGA 57.508 34.615 0.00 0.00 0.00 3.41
4075 4349 8.368668 ACTTATTACTAATGGACTGCTATGGAC 58.631 37.037 0.00 0.00 0.00 4.02
4076 4350 6.747414 ATTACTAATGGACTGCTATGGACA 57.253 37.500 0.00 0.00 0.00 4.02
4077 4351 4.679373 ACTAATGGACTGCTATGGACAG 57.321 45.455 0.00 0.00 41.08 3.51
4078 4352 3.389329 ACTAATGGACTGCTATGGACAGG 59.611 47.826 5.72 0.00 39.55 4.00
4079 4353 1.135094 ATGGACTGCTATGGACAGGG 58.865 55.000 5.72 0.00 39.55 4.45
4080 4354 0.252696 TGGACTGCTATGGACAGGGT 60.253 55.000 5.72 0.00 39.55 4.34
4081 4355 0.912486 GGACTGCTATGGACAGGGTT 59.088 55.000 5.72 0.00 39.55 4.11
4082 4356 1.407437 GGACTGCTATGGACAGGGTTG 60.407 57.143 5.72 0.00 39.55 3.77
4083 4357 0.620556 ACTGCTATGGACAGGGTTGG 59.379 55.000 5.72 0.00 39.55 3.77
4084 4358 0.911769 CTGCTATGGACAGGGTTGGA 59.088 55.000 0.00 0.00 0.00 3.53
4085 4359 1.281867 CTGCTATGGACAGGGTTGGAA 59.718 52.381 0.00 0.00 0.00 3.53
4086 4360 1.281867 TGCTATGGACAGGGTTGGAAG 59.718 52.381 0.00 0.00 0.00 3.46
4087 4361 2.019156 GCTATGGACAGGGTTGGAAGC 61.019 57.143 0.00 0.00 0.00 3.86
4088 4362 1.561542 CTATGGACAGGGTTGGAAGCT 59.438 52.381 0.00 0.00 0.00 3.74
4089 4363 0.779997 ATGGACAGGGTTGGAAGCTT 59.220 50.000 0.00 0.00 0.00 3.74
4090 4364 0.178992 TGGACAGGGTTGGAAGCTTG 60.179 55.000 2.10 0.00 39.12 4.01
4091 4365 1.527433 GGACAGGGTTGGAAGCTTGC 61.527 60.000 11.58 11.58 37.04 4.01
4092 4366 0.538287 GACAGGGTTGGAAGCTTGCT 60.538 55.000 19.34 0.00 37.04 3.91
4093 4367 0.771127 ACAGGGTTGGAAGCTTGCTA 59.229 50.000 19.34 8.91 37.04 3.49
4094 4368 1.355720 ACAGGGTTGGAAGCTTGCTAT 59.644 47.619 19.34 0.00 37.04 2.97
4095 4369 2.019984 CAGGGTTGGAAGCTTGCTATC 58.980 52.381 19.34 11.78 0.00 2.08
4096 4370 1.064389 AGGGTTGGAAGCTTGCTATCC 60.064 52.381 21.14 21.14 0.00 2.59
4097 4371 1.340991 GGGTTGGAAGCTTGCTATCCA 60.341 52.381 23.13 12.85 41.36 3.41
4098 4372 2.659428 GGTTGGAAGCTTGCTATCCAT 58.341 47.619 19.34 0.00 42.53 3.41
4099 4373 2.360165 GGTTGGAAGCTTGCTATCCATG 59.640 50.000 19.34 0.00 42.53 3.66
4100 4374 3.019564 GTTGGAAGCTTGCTATCCATGT 58.980 45.455 19.34 0.00 42.53 3.21
4101 4375 2.646930 TGGAAGCTTGCTATCCATGTG 58.353 47.619 19.34 0.00 38.30 3.21
4102 4376 1.336125 GGAAGCTTGCTATCCATGTGC 59.664 52.381 11.19 0.00 33.30 4.57
4103 4377 1.336125 GAAGCTTGCTATCCATGTGCC 59.664 52.381 2.10 0.00 0.00 5.01
4104 4378 0.256752 AGCTTGCTATCCATGTGCCA 59.743 50.000 0.00 0.00 0.00 4.92
4105 4379 0.666913 GCTTGCTATCCATGTGCCAG 59.333 55.000 0.00 0.00 0.00 4.85
4106 4380 1.748244 GCTTGCTATCCATGTGCCAGA 60.748 52.381 0.00 0.00 0.00 3.86
4107 4381 2.219458 CTTGCTATCCATGTGCCAGAG 58.781 52.381 0.00 0.00 0.00 3.35
4108 4382 0.179037 TGCTATCCATGTGCCAGAGC 60.179 55.000 0.00 0.00 40.48 4.09
4109 4383 0.888285 GCTATCCATGTGCCAGAGCC 60.888 60.000 0.00 0.00 38.69 4.70
4110 4384 0.471191 CTATCCATGTGCCAGAGCCA 59.529 55.000 0.00 0.00 38.69 4.75
4111 4385 1.073444 CTATCCATGTGCCAGAGCCAT 59.927 52.381 0.00 0.00 38.69 4.40
4112 4386 0.467474 ATCCATGTGCCAGAGCCATG 60.467 55.000 8.59 8.59 42.54 3.66
4113 4387 1.077285 CCATGTGCCAGAGCCATGA 60.077 57.895 14.22 0.00 44.14 3.07
4114 4388 1.101635 CCATGTGCCAGAGCCATGAG 61.102 60.000 14.22 5.17 44.14 2.90
4115 4389 0.393944 CATGTGCCAGAGCCATGAGT 60.394 55.000 0.00 0.00 44.14 3.41
4116 4390 0.330604 ATGTGCCAGAGCCATGAGTT 59.669 50.000 0.00 0.00 38.69 3.01
4117 4391 0.607217 TGTGCCAGAGCCATGAGTTG 60.607 55.000 0.00 0.00 38.69 3.16
4126 4400 3.231734 CCATGAGTTGGTTGCGAGA 57.768 52.632 0.00 0.00 40.99 4.04
4127 4401 1.742761 CCATGAGTTGGTTGCGAGAT 58.257 50.000 0.00 0.00 40.99 2.75
4128 4402 1.667724 CCATGAGTTGGTTGCGAGATC 59.332 52.381 0.00 0.00 40.99 2.75
4129 4403 2.625737 CATGAGTTGGTTGCGAGATCT 58.374 47.619 0.00 0.00 0.00 2.75
4130 4404 2.839486 TGAGTTGGTTGCGAGATCTT 57.161 45.000 0.00 0.00 0.00 2.40
4131 4405 3.953712 TGAGTTGGTTGCGAGATCTTA 57.046 42.857 0.00 0.00 0.00 2.10
4132 4406 4.471904 TGAGTTGGTTGCGAGATCTTAT 57.528 40.909 0.00 0.00 0.00 1.73
4133 4407 4.183865 TGAGTTGGTTGCGAGATCTTATG 58.816 43.478 0.00 0.00 0.00 1.90
4134 4408 3.535561 AGTTGGTTGCGAGATCTTATGG 58.464 45.455 0.00 0.00 0.00 2.74
4135 4409 2.614057 GTTGGTTGCGAGATCTTATGGG 59.386 50.000 0.00 0.00 0.00 4.00
4136 4410 1.837439 TGGTTGCGAGATCTTATGGGT 59.163 47.619 0.00 0.00 0.00 4.51
4137 4411 2.238646 TGGTTGCGAGATCTTATGGGTT 59.761 45.455 0.00 0.00 0.00 4.11
4138 4412 3.279434 GGTTGCGAGATCTTATGGGTTT 58.721 45.455 0.00 0.00 0.00 3.27
4139 4413 3.312697 GGTTGCGAGATCTTATGGGTTTC 59.687 47.826 0.00 0.00 0.00 2.78
4140 4414 3.904800 TGCGAGATCTTATGGGTTTCA 57.095 42.857 0.00 0.00 0.00 2.69
4141 4415 3.531538 TGCGAGATCTTATGGGTTTCAC 58.468 45.455 0.00 0.00 0.00 3.18
4142 4416 2.872858 GCGAGATCTTATGGGTTTCACC 59.127 50.000 0.00 0.00 37.60 4.02
4143 4417 3.432326 GCGAGATCTTATGGGTTTCACCT 60.432 47.826 0.00 0.00 38.64 4.00
4144 4418 4.372656 CGAGATCTTATGGGTTTCACCTC 58.627 47.826 0.00 0.00 38.64 3.85
4145 4419 4.100189 CGAGATCTTATGGGTTTCACCTCT 59.900 45.833 0.00 0.00 38.64 3.69
4146 4420 5.302059 CGAGATCTTATGGGTTTCACCTCTA 59.698 44.000 0.00 0.00 38.64 2.43
4147 4421 6.515862 CGAGATCTTATGGGTTTCACCTCTAG 60.516 46.154 0.00 0.00 38.64 2.43
4148 4422 4.755266 TCTTATGGGTTTCACCTCTAGC 57.245 45.455 0.00 0.00 38.64 3.42
4149 4423 3.454812 TCTTATGGGTTTCACCTCTAGCC 59.545 47.826 0.00 0.00 38.64 3.93
4150 4424 1.972588 ATGGGTTTCACCTCTAGCCT 58.027 50.000 0.00 0.00 38.64 4.58
4151 4425 2.634639 TGGGTTTCACCTCTAGCCTA 57.365 50.000 0.00 0.00 38.64 3.93
4152 4426 2.185387 TGGGTTTCACCTCTAGCCTAC 58.815 52.381 0.00 0.00 38.64 3.18
4153 4427 1.485480 GGGTTTCACCTCTAGCCTACC 59.515 57.143 0.00 0.00 38.64 3.18
4154 4428 1.485480 GGTTTCACCTCTAGCCTACCC 59.515 57.143 0.00 0.00 34.73 3.69
4155 4429 1.485480 GTTTCACCTCTAGCCTACCCC 59.515 57.143 0.00 0.00 0.00 4.95
4156 4430 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.00 0.00 4.96
4157 4431 0.714180 TCACCTCTAGCCTACCCCAA 59.286 55.000 0.00 0.00 0.00 4.12
4158 4432 0.831307 CACCTCTAGCCTACCCCAAC 59.169 60.000 0.00 0.00 0.00 3.77
4159 4433 0.717196 ACCTCTAGCCTACCCCAACT 59.283 55.000 0.00 0.00 0.00 3.16
4160 4434 1.080666 ACCTCTAGCCTACCCCAACTT 59.919 52.381 0.00 0.00 0.00 2.66
4161 4435 1.486726 CCTCTAGCCTACCCCAACTTG 59.513 57.143 0.00 0.00 0.00 3.16
4162 4436 2.188817 CTCTAGCCTACCCCAACTTGT 58.811 52.381 0.00 0.00 0.00 3.16
4163 4437 2.572104 CTCTAGCCTACCCCAACTTGTT 59.428 50.000 0.00 0.00 0.00 2.83
4164 4438 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
4165 4439 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
4176 4450 3.977427 CAACTTGTTTGGGACTAAAGGC 58.023 45.455 0.00 0.00 0.00 4.35
4177 4451 3.595190 ACTTGTTTGGGACTAAAGGCT 57.405 42.857 0.00 0.00 0.00 4.58
4178 4452 3.910989 ACTTGTTTGGGACTAAAGGCTT 58.089 40.909 0.00 0.00 0.00 4.35
4179 4453 4.286707 ACTTGTTTGGGACTAAAGGCTTT 58.713 39.130 17.76 17.76 0.00 3.51
4180 4454 4.099419 ACTTGTTTGGGACTAAAGGCTTTG 59.901 41.667 22.32 13.97 0.00 2.77
4181 4455 3.637769 TGTTTGGGACTAAAGGCTTTGT 58.362 40.909 22.32 16.86 0.00 2.83
4182 4456 4.027437 TGTTTGGGACTAAAGGCTTTGTT 58.973 39.130 22.32 8.73 0.00 2.83
4183 4457 4.142049 TGTTTGGGACTAAAGGCTTTGTTG 60.142 41.667 22.32 13.85 0.00 3.33
4184 4458 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
4185 4459 3.637769 TGGGACTAAAGGCTTTGTTGTT 58.362 40.909 22.32 1.84 0.00 2.83
4186 4460 3.383185 TGGGACTAAAGGCTTTGTTGTTG 59.617 43.478 22.32 7.79 0.00 3.33
4187 4461 3.383505 GGGACTAAAGGCTTTGTTGTTGT 59.616 43.478 22.32 10.58 0.00 3.32
4188 4462 4.142026 GGGACTAAAGGCTTTGTTGTTGTT 60.142 41.667 22.32 0.00 0.00 2.83
4189 4463 4.803613 GGACTAAAGGCTTTGTTGTTGTTG 59.196 41.667 22.32 0.00 0.00 3.33
4190 4464 5.400066 ACTAAAGGCTTTGTTGTTGTTGT 57.600 34.783 22.32 0.00 0.00 3.32
4191 4465 5.789521 ACTAAAGGCTTTGTTGTTGTTGTT 58.210 33.333 22.32 0.00 0.00 2.83
4192 4466 5.637387 ACTAAAGGCTTTGTTGTTGTTGTTG 59.363 36.000 22.32 0.00 0.00 3.33
4193 4467 3.676291 AGGCTTTGTTGTTGTTGTTGT 57.324 38.095 0.00 0.00 0.00 3.32
4194 4468 4.001618 AGGCTTTGTTGTTGTTGTTGTT 57.998 36.364 0.00 0.00 0.00 2.83
4195 4469 3.745458 AGGCTTTGTTGTTGTTGTTGTTG 59.255 39.130 0.00 0.00 0.00 3.33
4196 4470 3.496507 GGCTTTGTTGTTGTTGTTGTTGT 59.503 39.130 0.00 0.00 0.00 3.32
4197 4471 4.024472 GGCTTTGTTGTTGTTGTTGTTGTT 60.024 37.500 0.00 0.00 0.00 2.83
4198 4472 4.903016 GCTTTGTTGTTGTTGTTGTTGTTG 59.097 37.500 0.00 0.00 0.00 3.33
4199 4473 5.503194 GCTTTGTTGTTGTTGTTGTTGTTGT 60.503 36.000 0.00 0.00 0.00 3.32
4200 4474 6.422776 TTTGTTGTTGTTGTTGTTGTTGTT 57.577 29.167 0.00 0.00 0.00 2.83
4201 4475 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
4202 4476 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
4203 4477 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
4204 4478 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
4205 4479 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
4206 4480 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
4207 4481 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
4208 4482 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
4209 4483 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
4210 4484 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
4211 4485 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
4212 4486 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
4213 4487 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
4214 4488 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
4215 4489 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
4216 4490 6.533723 TGTTGTTGTTGTTGTTGTTGTTGTTA 59.466 30.769 0.00 0.00 0.00 2.41
4217 4491 7.224753 TGTTGTTGTTGTTGTTGTTGTTGTTAT 59.775 29.630 0.00 0.00 0.00 1.89
4218 4492 7.715265 TGTTGTTGTTGTTGTTGTTGTTATT 57.285 28.000 0.00 0.00 0.00 1.40
4219 4493 8.812147 TGTTGTTGTTGTTGTTGTTGTTATTA 57.188 26.923 0.00 0.00 0.00 0.98
4220 4494 8.700644 TGTTGTTGTTGTTGTTGTTGTTATTAC 58.299 29.630 0.00 0.00 0.00 1.89
4221 4495 8.917655 GTTGTTGTTGTTGTTGTTGTTATTACT 58.082 29.630 0.00 0.00 0.00 2.24
4226 4500 9.737427 TGTTGTTGTTGTTGTTATTACTAATGG 57.263 29.630 0.00 0.00 0.00 3.16
4227 4501 9.953697 GTTGTTGTTGTTGTTATTACTAATGGA 57.046 29.630 0.00 0.00 0.00 3.41
4228 4502 9.953697 TTGTTGTTGTTGTTATTACTAATGGAC 57.046 29.630 0.00 0.00 0.00 4.02
4229 4503 9.344772 TGTTGTTGTTGTTATTACTAATGGACT 57.655 29.630 0.00 0.00 0.00 3.85
4230 4504 9.607285 GTTGTTGTTGTTATTACTAATGGACTG 57.393 33.333 0.00 0.00 0.00 3.51
4231 4505 8.911918 TGTTGTTGTTATTACTAATGGACTGT 57.088 30.769 0.00 0.00 0.00 3.55
4232 4506 8.779303 TGTTGTTGTTATTACTAATGGACTGTG 58.221 33.333 0.00 0.00 0.00 3.66
4233 4507 7.915293 TGTTGTTATTACTAATGGACTGTGG 57.085 36.000 0.00 0.00 0.00 4.17
4234 4508 7.681679 TGTTGTTATTACTAATGGACTGTGGA 58.318 34.615 0.00 0.00 0.00 4.02
4371 5205 4.380233 GCATTTTTGCAGCTACATGACTCT 60.380 41.667 0.00 0.00 34.41 3.24
4388 5222 5.245531 TGACTCTGATTTTCTAATTGCGGT 58.754 37.500 0.00 0.00 0.00 5.68
4418 5252 6.141560 TGATGTTTGATTACTTGTTGCACA 57.858 33.333 0.00 0.00 0.00 4.57
5340 6215 6.331061 AGCACTCTCGGTAACTTTGTATAAG 58.669 40.000 0.00 0.00 0.00 1.73
5341 6216 6.152323 AGCACTCTCGGTAACTTTGTATAAGA 59.848 38.462 0.00 0.00 0.00 2.10
5409 6284 8.396390 CCTAGCAGTATCATTAATCATCAATGC 58.604 37.037 0.00 0.00 34.12 3.56
5445 6320 1.734477 CAGCCGATCGCCTTATCCG 60.734 63.158 10.32 0.00 38.78 4.18
5496 6371 0.951040 AAAGGCGACCAAGAAGCTCG 60.951 55.000 0.00 0.00 0.00 5.03
5658 6533 4.937431 GATAGCCGCCCAGCCACC 62.937 72.222 0.00 0.00 0.00 4.61
5664 6539 4.641645 CGCCCAGCCACCAACAGA 62.642 66.667 0.00 0.00 0.00 3.41
5665 6540 2.203480 GCCCAGCCACCAACAGAA 60.203 61.111 0.00 0.00 0.00 3.02
5666 6541 1.607467 GCCCAGCCACCAACAGAAT 60.607 57.895 0.00 0.00 0.00 2.40
5667 6542 1.880819 GCCCAGCCACCAACAGAATG 61.881 60.000 0.00 0.00 46.00 2.67
5668 6543 0.251297 CCCAGCCACCAACAGAATGA 60.251 55.000 0.00 0.00 39.69 2.57
5669 6544 1.171308 CCAGCCACCAACAGAATGAG 58.829 55.000 0.00 0.00 39.69 2.90
5670 6545 0.524862 CAGCCACCAACAGAATGAGC 59.475 55.000 0.00 0.00 39.69 4.26
5671 6546 0.610232 AGCCACCAACAGAATGAGCC 60.610 55.000 0.00 0.00 39.69 4.70
5672 6547 1.598701 GCCACCAACAGAATGAGCCC 61.599 60.000 0.00 0.00 39.69 5.19
5673 6548 0.038744 CCACCAACAGAATGAGCCCT 59.961 55.000 0.00 0.00 39.69 5.19
5674 6549 1.281867 CCACCAACAGAATGAGCCCTA 59.718 52.381 0.00 0.00 39.69 3.53
5726 6628 5.417580 GCACCACCCTCAACTTGAATTAATA 59.582 40.000 0.00 0.00 0.00 0.98
5766 6668 2.934553 GGCCGAACTCTTATGTTGGTAC 59.065 50.000 0.00 0.00 0.00 3.34
5791 6693 7.868922 ACACTATGTTAGTATGTTTGTCGAACA 59.131 33.333 8.12 8.12 43.92 3.18
5812 6714 2.178235 GGTTCGCGTTATGCCTCCC 61.178 63.158 5.77 0.00 42.08 4.30
5842 6744 2.398498 CTGTCAAACCTGTCTGAGTCG 58.602 52.381 0.00 0.00 0.00 4.18
5907 6809 4.498177 GCCTTGTCTGAACCTGAAAAAGTC 60.498 45.833 0.00 0.00 0.00 3.01
5912 6814 7.227049 TGTCTGAACCTGAAAAAGTCTTTTT 57.773 32.000 20.68 20.68 44.93 1.94
5913 6815 7.090173 TGTCTGAACCTGAAAAAGTCTTTTTG 58.910 34.615 24.53 14.31 42.51 2.44
5914 6816 6.035005 GTCTGAACCTGAAAAAGTCTTTTTGC 59.965 38.462 24.53 16.56 42.51 3.68
5915 6817 5.788450 TGAACCTGAAAAAGTCTTTTTGCA 58.212 33.333 24.53 19.31 42.51 4.08
5920 6822 5.529014 TGAAAAAGTCTTTTTGCAGTTGC 57.471 34.783 24.53 10.99 42.51 4.17
5921 6823 4.091220 TGAAAAAGTCTTTTTGCAGTTGCG 59.909 37.500 24.53 0.00 42.51 4.85
5922 6824 3.502191 AAAGTCTTTTTGCAGTTGCGA 57.498 38.095 0.00 0.00 45.83 5.10
5929 6835 5.284660 GTCTTTTTGCAGTTGCGATTATCTG 59.715 40.000 0.00 0.00 45.83 2.90
6023 6929 0.324091 GTTCTACTCCCTCCGTCCCA 60.324 60.000 0.00 0.00 0.00 4.37
6024 6930 0.324091 TTCTACTCCCTCCGTCCCAC 60.324 60.000 0.00 0.00 0.00 4.61
6026 6932 0.397254 CTACTCCCTCCGTCCCACAT 60.397 60.000 0.00 0.00 0.00 3.21
6041 6947 6.384224 CGTCCCACATAATATAAGAGCGTTA 58.616 40.000 0.00 0.00 0.00 3.18
6042 6948 6.307318 CGTCCCACATAATATAAGAGCGTTAC 59.693 42.308 0.00 0.00 0.00 2.50
6045 6951 8.737175 TCCCACATAATATAAGAGCGTTACTAG 58.263 37.037 0.00 0.00 0.00 2.57
6062 7169 0.178970 TAGTATGGGACGGAGGGAGC 60.179 60.000 0.00 0.00 0.00 4.70
6079 7186 2.084546 GAGCACCTTTTAGGCATCGTT 58.915 47.619 0.00 0.00 39.63 3.85
6080 7187 2.084546 AGCACCTTTTAGGCATCGTTC 58.915 47.619 0.00 0.00 39.63 3.95
6118 7226 2.837591 TCAGCAAGCTGGTTATGGTCTA 59.162 45.455 20.78 0.00 43.75 2.59
6121 7229 3.713764 AGCAAGCTGGTTATGGTCTATCT 59.286 43.478 0.00 0.00 0.00 1.98
6132 7240 4.946478 ATGGTCTATCTAGTGTTCCTGC 57.054 45.455 0.00 0.00 0.00 4.85
6135 7243 3.181474 GGTCTATCTAGTGTTCCTGCACC 60.181 52.174 0.00 0.00 40.04 5.01
6136 7244 3.702045 GTCTATCTAGTGTTCCTGCACCT 59.298 47.826 0.00 0.00 40.04 4.00
6137 7245 3.954904 TCTATCTAGTGTTCCTGCACCTC 59.045 47.826 0.00 0.00 40.04 3.85
6138 7246 1.267121 TCTAGTGTTCCTGCACCTCC 58.733 55.000 0.00 0.00 40.04 4.30
6139 7247 0.976641 CTAGTGTTCCTGCACCTCCA 59.023 55.000 0.00 0.00 40.04 3.86
6140 7248 1.556911 CTAGTGTTCCTGCACCTCCAT 59.443 52.381 0.00 0.00 40.04 3.41
6141 7249 0.037303 AGTGTTCCTGCACCTCCATG 59.963 55.000 0.00 0.00 40.04 3.66
6142 7250 0.036732 GTGTTCCTGCACCTCCATGA 59.963 55.000 0.00 0.00 33.53 3.07
6143 7251 0.770499 TGTTCCTGCACCTCCATGAA 59.230 50.000 0.00 0.00 0.00 2.57
6144 7252 1.355381 TGTTCCTGCACCTCCATGAAT 59.645 47.619 0.00 0.00 0.00 2.57
6145 7253 1.747355 GTTCCTGCACCTCCATGAATG 59.253 52.381 0.00 0.00 0.00 2.67
6162 7270 6.930164 CCATGAATGGTCAATTTTCTGTCAAA 59.070 34.615 0.82 0.00 43.05 2.69
6165 7273 8.592105 TGAATGGTCAATTTTCTGTCAAATTC 57.408 30.769 0.00 0.00 34.70 2.17
6168 7276 5.976534 TGGTCAATTTTCTGTCAAATTCGTG 59.023 36.000 0.00 0.00 34.70 4.35
6197 7306 9.650371 GAATTGTTTTTGGCTGAAAATTAAGTC 57.350 29.630 3.41 6.84 33.46 3.01
6263 7372 9.538508 CTGACAAACATCTAACAGATCATCATA 57.461 33.333 0.00 0.00 31.32 2.15
6264 7373 9.538508 TGACAAACATCTAACAGATCATCATAG 57.461 33.333 0.00 0.00 31.32 2.23
6265 7374 8.899427 ACAAACATCTAACAGATCATCATAGG 57.101 34.615 0.00 0.00 31.32 2.57
6267 7376 7.862274 AACATCTAACAGATCATCATAGGGA 57.138 36.000 0.00 0.00 31.32 4.20
6268 7377 7.479352 ACATCTAACAGATCATCATAGGGAG 57.521 40.000 0.00 0.00 31.32 4.30
6370 7484 4.276926 ACAAGCAACAGACATCTCTTTTCC 59.723 41.667 0.00 0.00 0.00 3.13
6584 7716 4.059511 CAGAGATCTGATTCATGCTGTCC 58.940 47.826 0.00 0.00 46.59 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 2.896443 GGCACGGGAGAAGAGGAG 59.104 66.667 0.00 0.00 0.00 3.69
55 56 0.670546 ACAGAATCAAGCCGACCACG 60.671 55.000 0.00 0.00 39.43 4.94
57 58 1.808411 GAACAGAATCAAGCCGACCA 58.192 50.000 0.00 0.00 0.00 4.02
211 212 7.926018 GCGAATATTTCCCAAACCTATCAAAAT 59.074 33.333 0.00 0.00 0.00 1.82
231 232 2.584970 CCCGAGCAAGCGCGAATA 60.585 61.111 19.33 0.00 45.49 1.75
245 246 2.162754 CCGTAGCACGCTAAACCCG 61.163 63.158 0.00 0.32 40.91 5.28
257 258 0.727398 GACATCACCAAAGCCGTAGC 59.273 55.000 0.00 0.00 40.32 3.58
276 277 1.349026 ACTGAGACCACCACCAATCAG 59.651 52.381 0.00 0.00 39.96 2.90
289 290 5.292765 TGTTTGAGAGATGAACACTGAGAC 58.707 41.667 0.00 0.00 0.00 3.36
306 307 7.173218 ACGAGAATAGCTGAAATCTTTGTTTGA 59.827 33.333 0.00 0.00 0.00 2.69
307 308 7.301054 ACGAGAATAGCTGAAATCTTTGTTTG 58.699 34.615 0.00 0.00 0.00 2.93
309 310 6.183360 CGACGAGAATAGCTGAAATCTTTGTT 60.183 38.462 0.00 0.00 0.00 2.83
310 311 5.289675 CGACGAGAATAGCTGAAATCTTTGT 59.710 40.000 0.00 0.00 0.00 2.83
311 312 5.289675 ACGACGAGAATAGCTGAAATCTTTG 59.710 40.000 0.00 0.00 0.00 2.77
315 316 3.060873 GCACGACGAGAATAGCTGAAATC 60.061 47.826 0.00 0.00 0.00 2.17
316 317 2.860735 GCACGACGAGAATAGCTGAAAT 59.139 45.455 0.00 0.00 0.00 2.17
318 319 1.472878 AGCACGACGAGAATAGCTGAA 59.527 47.619 0.00 0.00 0.00 3.02
319 320 1.095600 AGCACGACGAGAATAGCTGA 58.904 50.000 0.00 0.00 0.00 4.26
320 321 2.757686 TAGCACGACGAGAATAGCTG 57.242 50.000 0.00 0.00 33.83 4.24
321 322 2.605823 GCATAGCACGACGAGAATAGCT 60.606 50.000 0.00 0.00 36.20 3.32
322 323 1.716581 GCATAGCACGACGAGAATAGC 59.283 52.381 0.00 0.00 0.00 2.97
344 345 6.431234 AGCAACTCAAATACCGATTTCTTTCT 59.569 34.615 0.00 0.00 32.73 2.52
349 350 5.088739 CACAGCAACTCAAATACCGATTTC 58.911 41.667 0.00 0.00 32.73 2.17
354 355 1.806542 AGCACAGCAACTCAAATACCG 59.193 47.619 0.00 0.00 0.00 4.02
361 362 1.102809 CCCAACAGCACAGCAACTCA 61.103 55.000 0.00 0.00 0.00 3.41
368 369 4.162592 TGCTTCCCAACAGCACAG 57.837 55.556 0.00 0.00 42.49 3.66
402 404 7.468141 AAAGGAGAACACAGAATTAATTCCC 57.532 36.000 21.86 14.02 37.51 3.97
492 494 7.210174 ACGCTTCTATGCAATTTCTATACAGA 58.790 34.615 0.00 0.00 0.00 3.41
542 544 5.995446 TGCACCATCATTACCTGTATACAA 58.005 37.500 7.06 0.00 0.00 2.41
581 583 9.846755 CATGCCTACATATGCAAATGCACCTAC 62.847 44.444 10.74 0.00 44.34 3.18
599 601 2.158608 AGATTAACAGGGGCATGCCTAC 60.159 50.000 34.70 26.64 36.10 3.18
696 699 2.354510 CTGCCAAAAGTTTCTCACGTGA 59.645 45.455 18.88 18.88 0.00 4.35
714 717 6.912591 GCAACACCATATTATTAACTCACTGC 59.087 38.462 0.00 0.00 0.00 4.40
733 736 1.001048 TGCTCTCATGCTTTGCAACAC 60.001 47.619 0.00 0.00 43.62 3.32
792 795 0.900647 ATATCGGGAGGAGGCGGAAG 60.901 60.000 0.00 0.00 0.00 3.46
847 850 7.483375 CGCTTCCATAAAATTTCGATACAAACA 59.517 33.333 0.00 0.00 0.00 2.83
856 859 3.420839 AGGCGCTTCCATAAAATTTCG 57.579 42.857 7.64 0.00 37.29 3.46
961 965 2.264005 TTGACCACGTTAAGGCATGT 57.736 45.000 0.00 0.00 0.00 3.21
974 978 4.159321 TGAACTGCAAGACAAAATTGACCA 59.841 37.500 0.00 0.00 37.43 4.02
1008 1012 2.655474 GCGATCGTAACGGTCATCATAC 59.345 50.000 17.81 0.00 36.73 2.39
1251 1255 4.613437 AGTAGATGGTTCCCAAATTGCAT 58.387 39.130 0.00 0.00 36.95 3.96
1269 1273 0.607489 AAGCCAGGTGCAGCAAGTAG 60.607 55.000 19.63 2.57 44.83 2.57
1388 1393 3.396570 CTCCTTTACCCGGGCCGT 61.397 66.667 26.32 10.07 0.00 5.68
1389 1394 2.588856 CTTCTCCTTTACCCGGGCCG 62.589 65.000 24.08 21.46 0.00 6.13
1390 1395 1.223763 CTTCTCCTTTACCCGGGCC 59.776 63.158 24.08 0.00 0.00 5.80
1406 1411 1.616994 GCCAAGCCTATCACAACCCTT 60.617 52.381 0.00 0.00 0.00 3.95
1544 1549 4.909696 TTGACCCATACAACAACAACAG 57.090 40.909 0.00 0.00 0.00 3.16
1773 1820 2.192664 TATGCCGCAACAGAAGGAAA 57.807 45.000 0.00 0.00 0.00 3.13
1805 1852 4.745125 CCAGTAGCACTATGTAAATGGTCG 59.255 45.833 0.00 0.00 0.00 4.79
1848 1895 4.439289 GCTGGAAAGGTTTATCTGACATGC 60.439 45.833 0.00 0.00 0.00 4.06
1858 1905 5.197451 TCAAGTCAAAGCTGGAAAGGTTTA 58.803 37.500 2.88 0.00 37.39 2.01
1887 1934 2.492088 GCCCCTCAATACCTTCAACAAC 59.508 50.000 0.00 0.00 0.00 3.32
1959 2006 5.948992 ATCTTCTGTAACTTTGGAGCAAC 57.051 39.130 0.00 0.00 0.00 4.17
1996 2043 7.656137 TCGTAGAATAGGCAACAGAATATTTCC 59.344 37.037 0.00 0.00 41.41 3.13
2190 2237 3.213506 ACAATTAGCTGCGCATATTCCA 58.786 40.909 12.24 0.00 0.00 3.53
2243 2290 7.847711 TGATCCAGAAAAACAAAAATAGGGA 57.152 32.000 0.00 0.00 0.00 4.20
2323 2370 0.181114 TCCCATCAATCTCTTGGCCG 59.819 55.000 0.00 0.00 32.95 6.13
2399 2446 4.213482 CAGGGTGAAGTTTACAGTAGCAAC 59.787 45.833 0.00 0.00 0.00 4.17
2516 2563 4.202233 TGCAAGCATTTGTTTCTCCAATGA 60.202 37.500 0.00 0.00 36.65 2.57
2519 2566 3.456280 GTGCAAGCATTTGTTTCTCCAA 58.544 40.909 0.00 0.00 36.65 3.53
2520 2567 2.543445 CGTGCAAGCATTTGTTTCTCCA 60.543 45.455 0.00 0.00 36.65 3.86
2543 2591 2.122413 ATGGATGGGCCGCTAGGA 60.122 61.111 0.00 0.00 41.02 2.94
2612 2660 1.742411 CGCCCACCATCGTTGAATAGT 60.742 52.381 0.00 0.00 0.00 2.12
2689 2737 4.292186 ACTACATTGTGTTCTGCTCCAT 57.708 40.909 0.00 0.00 0.00 3.41
2699 2747 6.317642 TGTTGAGCTGTTTAACTACATTGTGT 59.682 34.615 0.00 0.00 0.00 3.72
2760 2808 7.313646 GGCCTTGACTTCCTTCTTTAATTAAC 58.686 38.462 0.00 0.00 0.00 2.01
2884 2932 9.762933 CTTTCCTAATTTTCAAAGGAACATTCA 57.237 29.630 6.20 0.00 46.46 2.57
2922 2970 4.330944 AACTGGTCACAATACGACAAGA 57.669 40.909 1.78 0.00 36.67 3.02
2929 2977 9.337396 TGGAATATCATTAACTGGTCACAATAC 57.663 33.333 0.00 0.00 0.00 1.89
2932 2980 8.821686 ATTGGAATATCATTAACTGGTCACAA 57.178 30.769 0.00 0.00 0.00 3.33
3035 3083 2.282816 CACCGCCATGAACCCCAA 60.283 61.111 0.00 0.00 0.00 4.12
3051 3099 0.670162 GGCTACGTACGGCTTATCCA 59.330 55.000 21.06 0.00 34.01 3.41
3120 3170 3.256824 TTTCAACTACGGCCGGGGG 62.257 63.158 31.76 20.37 0.00 5.40
3163 3213 1.228154 ACGTCAAGGAAACCCTGGC 60.228 57.895 0.00 0.00 33.44 4.85
3197 3247 2.228841 ATTGGGGTGCATCAGGTCCC 62.229 60.000 0.00 0.00 39.22 4.46
3342 3436 4.811024 GGCATAAGAATTCGTGAGACATGA 59.189 41.667 0.00 0.00 41.84 3.07
3351 3445 2.092968 TGGCTCTGGCATAAGAATTCGT 60.093 45.455 0.00 0.00 40.87 3.85
3352 3446 2.564771 TGGCTCTGGCATAAGAATTCG 58.435 47.619 0.00 0.00 40.87 3.34
3353 3447 4.139786 TCATGGCTCTGGCATAAGAATTC 58.860 43.478 6.30 0.00 47.00 2.17
3354 3448 4.142790 CTCATGGCTCTGGCATAAGAATT 58.857 43.478 6.30 0.00 47.00 2.17
3355 3449 3.137913 ACTCATGGCTCTGGCATAAGAAT 59.862 43.478 10.62 0.00 47.00 2.40
3356 3450 2.507058 ACTCATGGCTCTGGCATAAGAA 59.493 45.455 10.62 0.00 47.00 2.52
3357 3451 2.121948 ACTCATGGCTCTGGCATAAGA 58.878 47.619 10.62 3.37 47.00 2.10
3358 3452 2.617308 CAACTCATGGCTCTGGCATAAG 59.383 50.000 6.30 4.66 47.00 1.73
3359 3453 2.646930 CAACTCATGGCTCTGGCATAA 58.353 47.619 6.30 0.00 47.00 1.90
3360 3454 1.134007 CCAACTCATGGCTCTGGCATA 60.134 52.381 6.30 0.00 47.00 3.14
3362 3456 1.001764 CCAACTCATGGCTCTGGCA 60.002 57.895 0.00 0.00 43.80 4.92
3363 3457 3.915575 CCAACTCATGGCTCTGGC 58.084 61.111 0.00 0.00 43.80 4.85
3408 3502 1.105457 GCTTTGGCACATGGATAGCA 58.895 50.000 0.00 0.00 39.30 3.49
3434 3528 1.068588 CCCATAAGATCTCGCGACCAA 59.931 52.381 3.71 0.00 0.00 3.67
3503 3597 3.243367 GGAGAGAGGATTCGTGAGACATG 60.243 52.174 0.00 0.00 41.84 3.21
3504 3598 2.955660 GGAGAGAGGATTCGTGAGACAT 59.044 50.000 0.00 0.00 41.84 3.06
3505 3599 2.370349 GGAGAGAGGATTCGTGAGACA 58.630 52.381 0.00 0.00 41.84 3.41
3506 3600 1.679153 GGGAGAGAGGATTCGTGAGAC 59.321 57.143 0.00 0.00 41.84 3.36
3508 3602 1.407258 GTGGGAGAGAGGATTCGTGAG 59.593 57.143 0.00 0.00 0.00 3.51
3510 3604 0.101399 CGTGGGAGAGAGGATTCGTG 59.899 60.000 0.00 0.00 0.00 4.35
3554 3649 6.583427 CCATTGAACATGCATGAATATAACCG 59.417 38.462 32.75 11.64 0.00 4.44
3610 3705 2.409870 GGAGGTCGCTTGGCCAATG 61.410 63.158 20.85 15.01 0.00 2.82
3708 3804 2.509548 TCATGGAGGAATTAGTGGGTGG 59.490 50.000 0.00 0.00 0.00 4.61
3738 3834 4.262635 GCATCCGGAATTAATGGAGAGAGA 60.263 45.833 9.01 0.00 34.75 3.10
3739 3835 3.999663 GCATCCGGAATTAATGGAGAGAG 59.000 47.826 9.01 0.00 34.75 3.20
3811 3911 9.636879 CACAACATCACCAATTTATAAATGTCA 57.363 29.630 11.42 0.00 0.00 3.58
3831 3931 2.031258 TCGCTCCTTTGAACACAACA 57.969 45.000 0.00 0.00 0.00 3.33
3832 3932 3.300009 CAATCGCTCCTTTGAACACAAC 58.700 45.455 0.00 0.00 0.00 3.32
3839 3939 6.665992 ATATAGTACCAATCGCTCCTTTGA 57.334 37.500 0.00 0.00 0.00 2.69
4069 4343 1.668826 AGCTTCCAACCCTGTCCATA 58.331 50.000 0.00 0.00 0.00 2.74
4070 4344 0.779997 AAGCTTCCAACCCTGTCCAT 59.220 50.000 0.00 0.00 0.00 3.41
4071 4345 0.178992 CAAGCTTCCAACCCTGTCCA 60.179 55.000 0.00 0.00 0.00 4.02
4072 4346 1.527433 GCAAGCTTCCAACCCTGTCC 61.527 60.000 0.00 0.00 0.00 4.02
4073 4347 0.538287 AGCAAGCTTCCAACCCTGTC 60.538 55.000 0.00 0.00 0.00 3.51
4074 4348 0.771127 TAGCAAGCTTCCAACCCTGT 59.229 50.000 0.00 0.00 0.00 4.00
4075 4349 2.019984 GATAGCAAGCTTCCAACCCTG 58.980 52.381 0.00 0.00 0.00 4.45
4076 4350 1.064389 GGATAGCAAGCTTCCAACCCT 60.064 52.381 0.00 0.00 0.00 4.34
4077 4351 1.340991 TGGATAGCAAGCTTCCAACCC 60.341 52.381 17.61 0.00 36.62 4.11
4078 4352 2.128771 TGGATAGCAAGCTTCCAACC 57.871 50.000 17.61 1.16 36.62 3.77
4079 4353 3.019564 ACATGGATAGCAAGCTTCCAAC 58.980 45.455 21.27 0.00 42.53 3.77
4080 4354 3.018856 CACATGGATAGCAAGCTTCCAA 58.981 45.455 21.27 11.07 42.53 3.53
4081 4355 2.646930 CACATGGATAGCAAGCTTCCA 58.353 47.619 20.33 20.33 43.37 3.53
4082 4356 1.336125 GCACATGGATAGCAAGCTTCC 59.664 52.381 0.00 7.95 0.00 3.46
4083 4357 1.336125 GGCACATGGATAGCAAGCTTC 59.664 52.381 0.00 0.00 0.00 3.86
4084 4358 1.341285 TGGCACATGGATAGCAAGCTT 60.341 47.619 0.00 0.00 0.00 3.74
4085 4359 0.256752 TGGCACATGGATAGCAAGCT 59.743 50.000 0.00 0.00 0.00 3.74
4086 4360 0.666913 CTGGCACATGGATAGCAAGC 59.333 55.000 0.00 0.00 38.20 4.01
4087 4361 2.219458 CTCTGGCACATGGATAGCAAG 58.781 52.381 0.00 0.00 38.20 4.01
4088 4362 1.748244 GCTCTGGCACATGGATAGCAA 60.748 52.381 0.00 0.00 38.20 3.91
4089 4363 0.179037 GCTCTGGCACATGGATAGCA 60.179 55.000 0.00 0.00 38.20 3.49
4090 4364 0.888285 GGCTCTGGCACATGGATAGC 60.888 60.000 0.00 0.00 38.20 2.97
4091 4365 0.471191 TGGCTCTGGCACATGGATAG 59.529 55.000 0.00 0.00 38.20 2.08
4092 4366 1.142936 ATGGCTCTGGCACATGGATA 58.857 50.000 0.00 0.00 41.84 2.59
4093 4367 0.467474 CATGGCTCTGGCACATGGAT 60.467 55.000 7.68 0.00 41.84 3.41
4094 4368 1.077285 CATGGCTCTGGCACATGGA 60.077 57.895 7.68 0.00 41.84 3.41
4095 4369 1.077285 TCATGGCTCTGGCACATGG 60.077 57.895 13.76 0.00 41.84 3.66
4096 4370 0.393944 ACTCATGGCTCTGGCACATG 60.394 55.000 8.97 8.97 41.84 3.21
4097 4371 0.330604 AACTCATGGCTCTGGCACAT 59.669 50.000 0.00 0.00 41.84 3.21
4098 4372 0.607217 CAACTCATGGCTCTGGCACA 60.607 55.000 0.00 0.00 41.84 4.57
4099 4373 1.310933 CCAACTCATGGCTCTGGCAC 61.311 60.000 0.00 0.00 43.80 5.01
4100 4374 1.001764 CCAACTCATGGCTCTGGCA 60.002 57.895 0.00 0.00 43.80 4.92
4101 4375 3.915575 CCAACTCATGGCTCTGGC 58.084 61.111 0.00 0.00 43.80 4.85
4109 4383 2.625737 AGATCTCGCAACCAACTCATG 58.374 47.619 0.00 0.00 0.00 3.07
4110 4384 3.340814 AAGATCTCGCAACCAACTCAT 57.659 42.857 0.00 0.00 0.00 2.90
4111 4385 2.839486 AAGATCTCGCAACCAACTCA 57.161 45.000 0.00 0.00 0.00 3.41
4112 4386 3.557595 CCATAAGATCTCGCAACCAACTC 59.442 47.826 0.00 0.00 0.00 3.01
4113 4387 3.535561 CCATAAGATCTCGCAACCAACT 58.464 45.455 0.00 0.00 0.00 3.16
4114 4388 2.614057 CCCATAAGATCTCGCAACCAAC 59.386 50.000 0.00 0.00 0.00 3.77
4115 4389 2.238646 ACCCATAAGATCTCGCAACCAA 59.761 45.455 0.00 0.00 0.00 3.67
4116 4390 1.837439 ACCCATAAGATCTCGCAACCA 59.163 47.619 0.00 0.00 0.00 3.67
4117 4391 2.622064 ACCCATAAGATCTCGCAACC 57.378 50.000 0.00 0.00 0.00 3.77
4118 4392 3.938963 TGAAACCCATAAGATCTCGCAAC 59.061 43.478 0.00 0.00 0.00 4.17
4119 4393 3.938963 GTGAAACCCATAAGATCTCGCAA 59.061 43.478 0.00 0.00 0.00 4.85
4120 4394 3.531538 GTGAAACCCATAAGATCTCGCA 58.468 45.455 0.00 0.00 0.00 5.10
4135 4409 1.485480 GGGGTAGGCTAGAGGTGAAAC 59.515 57.143 0.00 0.00 0.00 2.78
4136 4410 1.079825 TGGGGTAGGCTAGAGGTGAAA 59.920 52.381 0.00 0.00 0.00 2.69
4137 4411 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18
4138 4412 0.714180 TTGGGGTAGGCTAGAGGTGA 59.286 55.000 0.00 0.00 0.00 4.02
4139 4413 0.831307 GTTGGGGTAGGCTAGAGGTG 59.169 60.000 0.00 0.00 0.00 4.00
4140 4414 0.717196 AGTTGGGGTAGGCTAGAGGT 59.283 55.000 0.00 0.00 0.00 3.85
4141 4415 1.486726 CAAGTTGGGGTAGGCTAGAGG 59.513 57.143 0.00 0.00 0.00 3.69
4142 4416 2.188817 ACAAGTTGGGGTAGGCTAGAG 58.811 52.381 7.96 0.00 0.00 2.43
4143 4417 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
4144 4418 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
4145 4419 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
4146 4420 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
4155 4429 3.636764 AGCCTTTAGTCCCAAACAAGTTG 59.363 43.478 0.00 0.00 36.94 3.16
4156 4430 3.910989 AGCCTTTAGTCCCAAACAAGTT 58.089 40.909 0.00 0.00 0.00 2.66
4157 4431 3.595190 AGCCTTTAGTCCCAAACAAGT 57.405 42.857 0.00 0.00 0.00 3.16
4158 4432 4.099419 ACAAAGCCTTTAGTCCCAAACAAG 59.901 41.667 0.00 0.00 0.00 3.16
4159 4433 4.027437 ACAAAGCCTTTAGTCCCAAACAA 58.973 39.130 0.00 0.00 0.00 2.83
4160 4434 3.637769 ACAAAGCCTTTAGTCCCAAACA 58.362 40.909 0.00 0.00 0.00 2.83
4161 4435 4.142026 ACAACAAAGCCTTTAGTCCCAAAC 60.142 41.667 0.00 0.00 0.00 2.93
4162 4436 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
4163 4437 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
4164 4438 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
4165 4439 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
4166 4440 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
4167 4441 5.407502 ACAACAACAACAAAGCCTTTAGTC 58.592 37.500 0.00 0.00 0.00 2.59
4168 4442 5.400066 ACAACAACAACAAAGCCTTTAGT 57.600 34.783 0.00 0.00 0.00 2.24
4169 4443 5.637387 ACAACAACAACAACAAAGCCTTTAG 59.363 36.000 0.00 0.00 0.00 1.85
4170 4444 5.542779 ACAACAACAACAACAAAGCCTTTA 58.457 33.333 0.00 0.00 0.00 1.85
4171 4445 4.384940 ACAACAACAACAACAAAGCCTTT 58.615 34.783 0.00 0.00 0.00 3.11
4172 4446 4.001618 ACAACAACAACAACAAAGCCTT 57.998 36.364 0.00 0.00 0.00 4.35
4173 4447 3.676291 ACAACAACAACAACAAAGCCT 57.324 38.095 0.00 0.00 0.00 4.58
4174 4448 3.496507 ACAACAACAACAACAACAAAGCC 59.503 39.130 0.00 0.00 0.00 4.35
4175 4449 4.723879 ACAACAACAACAACAACAAAGC 57.276 36.364 0.00 0.00 0.00 3.51
4176 4450 6.042144 ACAACAACAACAACAACAACAAAG 57.958 33.333 0.00 0.00 0.00 2.77
4177 4451 6.128282 ACAACAACAACAACAACAACAACAAA 60.128 30.769 0.00 0.00 0.00 2.83
4178 4452 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
4179 4453 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
4180 4454 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
4181 4455 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
4182 4456 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
4183 4457 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
4184 4458 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
4185 4459 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
4186 4460 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
4187 4461 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
4188 4462 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
4189 4463 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
4190 4464 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
4191 4465 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
4192 4466 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
4193 4467 7.715265 ATAACAACAACAACAACAACAACAA 57.285 28.000 0.00 0.00 0.00 2.83
4194 4468 7.715265 AATAACAACAACAACAACAACAACA 57.285 28.000 0.00 0.00 0.00 3.33
4195 4469 8.917655 AGTAATAACAACAACAACAACAACAAC 58.082 29.630 0.00 0.00 0.00 3.32
4200 4474 9.737427 CCATTAGTAATAACAACAACAACAACA 57.263 29.630 0.00 0.00 0.00 3.33
4201 4475 9.953697 TCCATTAGTAATAACAACAACAACAAC 57.046 29.630 0.00 0.00 0.00 3.32
4202 4476 9.953697 GTCCATTAGTAATAACAACAACAACAA 57.046 29.630 0.00 0.00 0.00 2.83
4203 4477 9.344772 AGTCCATTAGTAATAACAACAACAACA 57.655 29.630 0.00 0.00 0.00 3.33
4204 4478 9.607285 CAGTCCATTAGTAATAACAACAACAAC 57.393 33.333 0.00 0.00 0.00 3.32
4205 4479 9.344772 ACAGTCCATTAGTAATAACAACAACAA 57.655 29.630 0.00 0.00 0.00 2.83
4206 4480 8.779303 CACAGTCCATTAGTAATAACAACAACA 58.221 33.333 0.00 0.00 0.00 3.33
4207 4481 8.234546 CCACAGTCCATTAGTAATAACAACAAC 58.765 37.037 0.00 0.00 0.00 3.32
4208 4482 8.158132 TCCACAGTCCATTAGTAATAACAACAA 58.842 33.333 0.00 0.00 0.00 2.83
4209 4483 7.681679 TCCACAGTCCATTAGTAATAACAACA 58.318 34.615 0.00 0.00 0.00 3.33
4210 4484 8.732746 ATCCACAGTCCATTAGTAATAACAAC 57.267 34.615 0.00 0.00 0.00 3.32
4211 4485 9.173021 CAATCCACAGTCCATTAGTAATAACAA 57.827 33.333 0.00 0.00 0.00 2.83
4212 4486 8.544622 TCAATCCACAGTCCATTAGTAATAACA 58.455 33.333 0.00 0.00 0.00 2.41
4213 4487 8.958119 TCAATCCACAGTCCATTAGTAATAAC 57.042 34.615 0.00 0.00 0.00 1.89
4216 4490 8.938883 AGTATCAATCCACAGTCCATTAGTAAT 58.061 33.333 0.00 0.00 0.00 1.89
4217 4491 8.319057 AGTATCAATCCACAGTCCATTAGTAA 57.681 34.615 0.00 0.00 0.00 2.24
4218 4492 7.914427 AGTATCAATCCACAGTCCATTAGTA 57.086 36.000 0.00 0.00 0.00 1.82
4219 4493 6.814954 AGTATCAATCCACAGTCCATTAGT 57.185 37.500 0.00 0.00 0.00 2.24
4220 4494 8.642432 TCTAAGTATCAATCCACAGTCCATTAG 58.358 37.037 0.00 0.00 0.00 1.73
4221 4495 8.547481 TCTAAGTATCAATCCACAGTCCATTA 57.453 34.615 0.00 0.00 0.00 1.90
4222 4496 7.437713 TCTAAGTATCAATCCACAGTCCATT 57.562 36.000 0.00 0.00 0.00 3.16
4223 4497 7.437713 TTCTAAGTATCAATCCACAGTCCAT 57.562 36.000 0.00 0.00 0.00 3.41
4224 4498 6.867519 TTCTAAGTATCAATCCACAGTCCA 57.132 37.500 0.00 0.00 0.00 4.02
4225 4499 7.103641 TGTTTCTAAGTATCAATCCACAGTCC 58.896 38.462 0.00 0.00 0.00 3.85
4226 4500 8.723942 ATGTTTCTAAGTATCAATCCACAGTC 57.276 34.615 0.00 0.00 0.00 3.51
4227 4501 8.321353 TGATGTTTCTAAGTATCAATCCACAGT 58.679 33.333 0.00 0.00 0.00 3.55
4228 4502 8.722480 TGATGTTTCTAAGTATCAATCCACAG 57.278 34.615 0.00 0.00 0.00 3.66
4229 4503 7.770433 CCTGATGTTTCTAAGTATCAATCCACA 59.230 37.037 0.00 0.00 0.00 4.17
4230 4504 7.227512 CCCTGATGTTTCTAAGTATCAATCCAC 59.772 40.741 0.00 0.00 0.00 4.02
4231 4505 7.127186 TCCCTGATGTTTCTAAGTATCAATCCA 59.873 37.037 0.00 0.00 0.00 3.41
4232 4506 7.509546 TCCCTGATGTTTCTAAGTATCAATCC 58.490 38.462 0.00 0.00 0.00 3.01
4233 4507 9.566432 AATCCCTGATGTTTCTAAGTATCAATC 57.434 33.333 0.00 0.00 0.00 2.67
4234 4508 9.927081 AAATCCCTGATGTTTCTAAGTATCAAT 57.073 29.630 0.00 0.00 0.00 2.57
4371 5205 7.284261 TCATTATCCACCGCAATTAGAAAATCA 59.716 33.333 0.00 0.00 0.00 2.57
4418 5252 6.207417 ACAGCAACATTAAGAATACAGCAACT 59.793 34.615 0.00 0.00 0.00 3.16
4730 5565 6.575942 GCAAAAGCTAAAAATCAAATGTGCAG 59.424 34.615 0.00 0.00 0.00 4.41
4760 5595 3.031417 TAGCTTCTTCCCCGCCTGC 62.031 63.158 0.00 0.00 0.00 4.85
5340 6215 6.215845 AGAATGTAAAACAACAGGCACATTC 58.784 36.000 14.36 14.36 46.39 2.67
5341 6216 6.160576 AGAATGTAAAACAACAGGCACATT 57.839 33.333 0.00 0.00 38.83 2.71
5409 6284 7.072177 TCGGCTGTTAATAAGAAAATCACAG 57.928 36.000 0.00 0.00 34.52 3.66
5445 6320 0.033228 CAGCACGATCATCCCTCCTC 59.967 60.000 0.00 0.00 0.00 3.71
5496 6371 2.312390 CTCCTCCTAGGGCTGTAACTC 58.688 57.143 9.46 0.00 35.59 3.01
5648 6523 1.607467 ATTCTGTTGGTGGCTGGGC 60.607 57.895 0.00 0.00 0.00 5.36
5649 6524 0.251297 TCATTCTGTTGGTGGCTGGG 60.251 55.000 0.00 0.00 0.00 4.45
5650 6525 1.171308 CTCATTCTGTTGGTGGCTGG 58.829 55.000 0.00 0.00 0.00 4.85
5651 6526 0.524862 GCTCATTCTGTTGGTGGCTG 59.475 55.000 0.00 0.00 0.00 4.85
5652 6527 0.610232 GGCTCATTCTGTTGGTGGCT 60.610 55.000 0.00 0.00 0.00 4.75
5653 6528 1.598701 GGGCTCATTCTGTTGGTGGC 61.599 60.000 0.00 0.00 0.00 5.01
5654 6529 0.038744 AGGGCTCATTCTGTTGGTGG 59.961 55.000 0.00 0.00 0.00 4.61
5655 6530 2.636830 CTAGGGCTCATTCTGTTGGTG 58.363 52.381 0.00 0.00 0.00 4.17
5656 6531 1.065126 GCTAGGGCTCATTCTGTTGGT 60.065 52.381 0.00 0.00 35.22 3.67
5657 6532 1.673168 GCTAGGGCTCATTCTGTTGG 58.327 55.000 0.00 0.00 35.22 3.77
5658 6533 1.673168 GGCTAGGGCTCATTCTGTTG 58.327 55.000 0.00 0.00 38.73 3.33
5659 6534 0.548510 GGGCTAGGGCTCATTCTGTT 59.451 55.000 0.00 0.00 39.12 3.16
5660 6535 1.348775 GGGGCTAGGGCTCATTCTGT 61.349 60.000 0.00 0.00 41.58 3.41
5661 6536 1.059006 AGGGGCTAGGGCTCATTCTG 61.059 60.000 0.00 0.00 41.58 3.02
5662 6537 1.059006 CAGGGGCTAGGGCTCATTCT 61.059 60.000 0.00 0.00 41.58 2.40
5663 6538 1.453669 CAGGGGCTAGGGCTCATTC 59.546 63.158 0.00 0.00 41.58 2.67
5664 6539 2.081161 CCAGGGGCTAGGGCTCATT 61.081 63.158 0.00 0.00 41.58 2.57
5665 6540 2.449322 CCAGGGGCTAGGGCTCAT 60.449 66.667 0.00 0.00 41.58 2.90
5666 6541 4.823732 CCCAGGGGCTAGGGCTCA 62.824 72.222 0.00 0.00 41.58 4.26
5667 6542 4.499116 TCCCAGGGGCTAGGGCTC 62.499 72.222 5.33 0.00 45.07 4.70
5668 6543 4.505970 CTCCCAGGGGCTAGGGCT 62.506 72.222 5.33 0.00 45.07 5.19
5669 6544 4.825679 ACTCCCAGGGGCTAGGGC 62.826 72.222 5.33 0.00 45.07 5.19
5670 6545 2.628187 ATCACTCCCAGGGGCTAGGG 62.628 65.000 5.33 0.00 46.90 3.53
5671 6546 1.074167 ATCACTCCCAGGGGCTAGG 60.074 63.158 5.33 0.00 34.68 3.02
5672 6547 1.414061 CCATCACTCCCAGGGGCTAG 61.414 65.000 5.33 0.00 34.68 3.42
5673 6548 1.384502 CCATCACTCCCAGGGGCTA 60.385 63.158 5.33 0.00 34.68 3.93
5674 6549 2.693864 CCATCACTCCCAGGGGCT 60.694 66.667 5.33 0.00 34.68 5.19
5726 6628 2.086869 CCCAAGAGACGATGCAACAAT 58.913 47.619 0.00 0.00 0.00 2.71
5766 6668 8.234887 TGTTCGACAAACATACTAACATAGTG 57.765 34.615 0.37 0.00 42.95 2.74
5791 6693 0.874607 GAGGCATAACGCGAACCGAT 60.875 55.000 15.93 0.00 43.84 4.18
5812 6714 2.806244 CAGGTTTGACAGGTTTAGACGG 59.194 50.000 0.00 0.00 0.00 4.79
5842 6744 9.771915 AACATTTGTCAAACATGAAAAATTCAC 57.228 25.926 0.00 0.00 43.48 3.18
5907 6809 4.560035 CCAGATAATCGCAACTGCAAAAAG 59.440 41.667 2.12 0.00 42.21 2.27
5912 6814 2.093500 AGTCCAGATAATCGCAACTGCA 60.093 45.455 2.12 0.00 42.21 4.41
5913 6815 2.555199 AGTCCAGATAATCGCAACTGC 58.445 47.619 0.00 0.00 37.78 4.40
5914 6816 3.310774 CCAAGTCCAGATAATCGCAACTG 59.689 47.826 0.00 0.00 0.00 3.16
5915 6817 3.535561 CCAAGTCCAGATAATCGCAACT 58.464 45.455 0.00 0.00 0.00 3.16
5916 6818 2.032178 GCCAAGTCCAGATAATCGCAAC 59.968 50.000 0.00 0.00 0.00 4.17
5918 6820 1.486310 AGCCAAGTCCAGATAATCGCA 59.514 47.619 0.00 0.00 0.00 5.10
5919 6821 2.246719 AGCCAAGTCCAGATAATCGC 57.753 50.000 0.00 0.00 0.00 4.58
5920 6822 3.243873 TGCTAGCCAAGTCCAGATAATCG 60.244 47.826 13.29 0.00 0.00 3.34
5921 6823 4.342862 TGCTAGCCAAGTCCAGATAATC 57.657 45.455 13.29 0.00 0.00 1.75
5922 6824 4.349048 TCATGCTAGCCAAGTCCAGATAAT 59.651 41.667 13.29 0.00 0.00 1.28
5929 6835 2.158842 ACTGATCATGCTAGCCAAGTCC 60.159 50.000 13.29 0.00 0.00 3.85
6026 6932 9.964354 TCCCATACTAGTAACGCTCTTATATTA 57.036 33.333 6.70 0.00 0.00 0.98
6041 6947 1.145325 CTCCCTCCGTCCCATACTAGT 59.855 57.143 0.00 0.00 0.00 2.57
6042 6948 1.912417 CTCCCTCCGTCCCATACTAG 58.088 60.000 0.00 0.00 0.00 2.57
6045 6951 1.760875 TGCTCCCTCCGTCCCATAC 60.761 63.158 0.00 0.00 0.00 2.39
6062 7169 4.497473 TTTGAACGATGCCTAAAAGGTG 57.503 40.909 0.00 0.00 37.80 4.00
6118 7226 1.834263 GGAGGTGCAGGAACACTAGAT 59.166 52.381 0.00 0.00 40.52 1.98
6121 7229 1.278985 CATGGAGGTGCAGGAACACTA 59.721 52.381 0.00 0.00 40.52 2.74
6138 7246 7.949903 TTTGACAGAAAATTGACCATTCATG 57.050 32.000 0.00 0.00 0.00 3.07
6139 7247 9.211485 GAATTTGACAGAAAATTGACCATTCAT 57.789 29.630 0.00 0.00 39.31 2.57
6140 7248 7.381948 CGAATTTGACAGAAAATTGACCATTCA 59.618 33.333 0.00 0.00 39.31 2.57
6141 7249 7.382218 ACGAATTTGACAGAAAATTGACCATTC 59.618 33.333 0.00 0.00 39.31 2.67
6142 7250 7.169645 CACGAATTTGACAGAAAATTGACCATT 59.830 33.333 0.00 0.00 39.31 3.16
6143 7251 6.642131 CACGAATTTGACAGAAAATTGACCAT 59.358 34.615 0.00 0.00 39.31 3.55
6144 7252 5.976534 CACGAATTTGACAGAAAATTGACCA 59.023 36.000 0.00 0.00 39.31 4.02
6145 7253 6.205784 TCACGAATTTGACAGAAAATTGACC 58.794 36.000 0.00 0.00 39.31 4.02
6146 7254 6.360681 CCTCACGAATTTGACAGAAAATTGAC 59.639 38.462 0.00 0.00 39.31 3.18
6147 7255 6.262049 TCCTCACGAATTTGACAGAAAATTGA 59.738 34.615 0.00 0.00 39.31 2.57
6148 7256 6.437928 TCCTCACGAATTTGACAGAAAATTG 58.562 36.000 0.00 0.00 39.31 2.32
6162 7270 4.039124 AGCCAAAAACAATTCCTCACGAAT 59.961 37.500 0.00 0.00 43.34 3.34
6165 7273 3.052036 CAGCCAAAAACAATTCCTCACG 58.948 45.455 0.00 0.00 0.00 4.35
6168 7276 6.866010 ATTTTCAGCCAAAAACAATTCCTC 57.134 33.333 0.00 0.00 37.52 3.71
6197 7306 7.392113 TGTTAACTACCTATTTGGAACACATGG 59.608 37.037 7.22 0.00 39.29 3.66
6263 7372 9.362151 TGTTTTGTTCTTTGAATTATACTCCCT 57.638 29.630 0.00 0.00 0.00 4.20
6370 7484 3.639094 TGGTAAAAACATGTTGACCTGGG 59.361 43.478 26.00 0.00 0.00 4.45
6584 7716 1.097547 GCCCGGACATCTCCAATGTG 61.098 60.000 0.73 0.00 36.12 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.