Multiple sequence alignment - TraesCS1D01G107700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G107700 chr1D 100.000 4123 0 0 1 4123 100659999 100664121 0.000000e+00 7614.0
1 TraesCS1D01G107700 chr1A 93.167 3015 117 38 219 3179 104923012 104920033 0.000000e+00 4344.0
2 TraesCS1D01G107700 chr1A 85.052 194 17 6 515 699 259016045 259016235 1.960000e-43 187.0
3 TraesCS1D01G107700 chr1B 89.618 3323 184 70 206 3426 151072441 151069178 0.000000e+00 4076.0
4 TraesCS1D01G107700 chr1B 90.756 357 33 0 3426 3782 151068208 151067852 1.040000e-130 477.0
5 TraesCS1D01G107700 chr2D 85.238 1260 173 12 1899 3151 602451724 602450471 0.000000e+00 1284.0
6 TraesCS1D01G107700 chr2D 78.565 1143 231 11 1900 3038 651648800 651649932 0.000000e+00 741.0
7 TraesCS1D01G107700 chr2D 87.047 193 21 3 1627 1816 602451929 602451738 8.980000e-52 215.0
8 TraesCS1D01G107700 chr2D 87.047 193 16 4 515 699 118467143 118467334 4.180000e-50 209.0
9 TraesCS1D01G107700 chr2D 85.492 193 17 4 515 699 118519778 118519967 1.510000e-44 191.0
10 TraesCS1D01G107700 chr2D 87.821 156 17 2 2 156 388477962 388477808 9.100000e-42 182.0
11 TraesCS1D01G107700 chr2D 85.906 149 18 2 11 158 607087746 607087600 5.520000e-34 156.0
12 TraesCS1D01G107700 chr2D 81.034 116 16 5 1158 1270 602453300 602453188 2.040000e-13 87.9
13 TraesCS1D01G107700 chr2B 85.000 1260 176 13 1899 3151 732568654 732567401 0.000000e+00 1267.0
14 TraesCS1D01G107700 chr2B 78.897 526 77 19 1312 1816 732569180 732568668 3.970000e-85 326.0
15 TraesCS1D01G107700 chr2B 85.417 192 18 4 515 698 439363843 439364032 1.510000e-44 191.0
16 TraesCS1D01G107700 chr2A 78.272 1146 235 11 1900 3041 776022994 776021859 0.000000e+00 725.0
17 TraesCS1D01G107700 chr2A 83.420 193 20 5 515 698 702388050 702388239 7.090000e-38 169.0
18 TraesCS1D01G107700 chr2A 87.671 73 9 0 1168 1240 734925507 734925435 7.340000e-13 86.1
19 TraesCS1D01G107700 chrUn 78.030 1147 236 13 1900 3041 23653088 23651953 0.000000e+00 708.0
20 TraesCS1D01G107700 chrUn 83.221 149 19 6 2 147 332381068 332381213 9.300000e-27 132.0
21 TraesCS1D01G107700 chr4D 76.987 843 157 31 2125 2947 428717520 428718345 8.130000e-122 448.0
22 TraesCS1D01G107700 chr4B 76.576 841 164 29 2125 2947 526736897 526736072 8.190000e-117 431.0
23 TraesCS1D01G107700 chr4B 73.551 828 180 37 2091 2900 526275011 526275817 3.140000e-71 279.0
24 TraesCS1D01G107700 chr4A 75.919 843 166 31 2125 2947 37785009 37784184 8.300000e-107 398.0
25 TraesCS1D01G107700 chr6D 80.137 438 74 7 3317 3752 413203077 413203503 8.600000e-82 315.0
26 TraesCS1D01G107700 chr6A 78.851 435 81 6 3317 3749 558776331 558776756 2.430000e-72 283.0
27 TraesCS1D01G107700 chr6A 85.222 203 16 6 515 705 28259297 28259097 3.250000e-46 196.0
28 TraesCS1D01G107700 chr5B 87.047 193 15 4 515 699 507811555 507811745 4.180000e-50 209.0
29 TraesCS1D01G107700 chr5B 91.589 107 4 2 596 697 518471982 518472088 4.300000e-30 143.0
30 TraesCS1D01G107700 chr3B 89.103 156 17 0 2 157 601375898 601376053 1.170000e-45 195.0
31 TraesCS1D01G107700 chr3B 82.911 158 21 6 2 156 88409818 88409664 2.000000e-28 137.0
32 TraesCS1D01G107700 chr7D 87.162 148 15 4 2 147 109516606 109516461 9.170000e-37 165.0
33 TraesCS1D01G107700 chr7D 84.564 149 23 0 3661 3809 524858524 524858376 9.230000e-32 148.0
34 TraesCS1D01G107700 chr3D 85.897 156 20 1 2 157 291762249 291762402 9.170000e-37 165.0
35 TraesCS1D01G107700 chr3D 82.692 156 25 2 2 156 184562077 184561923 2.000000e-28 137.0
36 TraesCS1D01G107700 chr3D 76.923 195 31 12 514 699 481709075 481708886 9.430000e-17 99.0
37 TraesCS1D01G107700 chr5D 87.413 143 16 2 5 147 448169112 448168972 3.300000e-36 163.0
38 TraesCS1D01G107700 chr5D 87.387 111 14 0 3661 3771 452884144 452884254 1.200000e-25 128.0
39 TraesCS1D01G107700 chr7A 82.432 148 25 1 3661 3808 604799296 604799150 1.200000e-25 128.0
40 TraesCS1D01G107700 chr7B 82.090 134 22 1 3678 3809 730563892 730563759 3.370000e-21 113.0
41 TraesCS1D01G107700 chr7B 82.090 134 22 1 3678 3809 730680528 730680395 3.370000e-21 113.0
42 TraesCS1D01G107700 chr7B 82.090 134 22 1 3678 3809 730707155 730707022 3.370000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G107700 chr1D 100659999 100664121 4122 False 7614.000000 7614 100.000000 1 4123 1 chr1D.!!$F1 4122
1 TraesCS1D01G107700 chr1A 104920033 104923012 2979 True 4344.000000 4344 93.167000 219 3179 1 chr1A.!!$R1 2960
2 TraesCS1D01G107700 chr1B 151067852 151072441 4589 True 2276.500000 4076 90.187000 206 3782 2 chr1B.!!$R1 3576
3 TraesCS1D01G107700 chr2D 651648800 651649932 1132 False 741.000000 741 78.565000 1900 3038 1 chr2D.!!$F3 1138
4 TraesCS1D01G107700 chr2D 602450471 602453300 2829 True 528.966667 1284 84.439667 1158 3151 3 chr2D.!!$R3 1993
5 TraesCS1D01G107700 chr2B 732567401 732569180 1779 True 796.500000 1267 81.948500 1312 3151 2 chr2B.!!$R1 1839
6 TraesCS1D01G107700 chr2A 776021859 776022994 1135 True 725.000000 725 78.272000 1900 3041 1 chr2A.!!$R2 1141
7 TraesCS1D01G107700 chrUn 23651953 23653088 1135 True 708.000000 708 78.030000 1900 3041 1 chrUn.!!$R1 1141
8 TraesCS1D01G107700 chr4D 428717520 428718345 825 False 448.000000 448 76.987000 2125 2947 1 chr4D.!!$F1 822
9 TraesCS1D01G107700 chr4B 526736072 526736897 825 True 431.000000 431 76.576000 2125 2947 1 chr4B.!!$R1 822
10 TraesCS1D01G107700 chr4B 526275011 526275817 806 False 279.000000 279 73.551000 2091 2900 1 chr4B.!!$F1 809
11 TraesCS1D01G107700 chr4A 37784184 37785009 825 True 398.000000 398 75.919000 2125 2947 1 chr4A.!!$R1 822

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
113 114 0.035056 GTGCAGAGGCTGGGTGTAAT 60.035 55.0 0.0 0.0 41.91 1.89 F
171 172 0.038618 AAAAATGCGTCGGGGCTTTC 60.039 50.0 0.0 0.0 30.88 2.62 F
182 183 0.393808 GGGGCTTTCCGATTGTAGCA 60.394 55.0 0.0 0.0 35.36 3.49 F
527 533 0.534203 TGCAGTCGGGAGTTTGTTCC 60.534 55.0 0.0 0.0 36.46 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1356 2290 0.531974 TGTTCTCGATAATGCCGCCC 60.532 55.000 0.00 0.00 0.00 6.13 R
1869 2881 2.682856 CGGCCTGTACATGCAAACTTAT 59.317 45.455 22.26 0.00 0.00 1.73 R
2355 3376 1.152989 GAGCTGATCCGCTTCTGCAG 61.153 60.000 13.24 7.63 41.08 4.41 R
3133 4166 3.678072 GCTGTGTATTGTGTATGTGTCGT 59.322 43.478 0.00 0.00 0.00 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 5.751243 ACTGCGACAGTGTCTTTATTTTT 57.249 34.783 20.64 0.00 43.63 1.94
28 29 6.854496 ACTGCGACAGTGTCTTTATTTTTA 57.146 33.333 20.64 0.00 43.63 1.52
29 30 7.435068 ACTGCGACAGTGTCTTTATTTTTAT 57.565 32.000 20.64 0.00 43.63 1.40
30 31 8.542497 ACTGCGACAGTGTCTTTATTTTTATA 57.458 30.769 20.64 0.00 43.63 0.98
31 32 9.162764 ACTGCGACAGTGTCTTTATTTTTATAT 57.837 29.630 20.64 0.00 43.63 0.86
32 33 9.988350 CTGCGACAGTGTCTTTATTTTTATATT 57.012 29.630 20.64 0.00 0.00 1.28
64 65 7.887996 TTTTTATTTTGCTCTTGGCTATGTG 57.112 32.000 0.00 0.00 42.39 3.21
65 66 3.515330 ATTTTGCTCTTGGCTATGTGC 57.485 42.857 3.50 3.50 42.39 4.57
66 67 1.908344 TTTGCTCTTGGCTATGTGCA 58.092 45.000 8.32 8.32 45.15 4.57
67 68 2.133281 TTGCTCTTGGCTATGTGCAT 57.867 45.000 12.28 0.00 45.15 3.96
68 69 1.671979 TGCTCTTGGCTATGTGCATC 58.328 50.000 8.32 0.00 45.15 3.91
69 70 0.950116 GCTCTTGGCTATGTGCATCC 59.050 55.000 5.34 0.00 45.15 3.51
70 71 1.476471 GCTCTTGGCTATGTGCATCCT 60.476 52.381 5.34 0.00 45.15 3.24
71 72 2.219458 CTCTTGGCTATGTGCATCCTG 58.781 52.381 0.00 0.00 45.15 3.86
72 73 1.134007 TCTTGGCTATGTGCATCCTGG 60.134 52.381 0.00 0.00 45.15 4.45
73 74 0.918258 TTGGCTATGTGCATCCTGGA 59.082 50.000 0.00 0.00 45.15 3.86
74 75 1.142936 TGGCTATGTGCATCCTGGAT 58.857 50.000 2.57 2.57 45.15 3.41
75 76 1.202842 TGGCTATGTGCATCCTGGATG 60.203 52.381 28.45 28.45 45.15 3.51
83 84 3.786656 CATCCTGGATGCCTTTCGA 57.213 52.632 22.79 0.00 33.17 3.71
84 85 2.267174 CATCCTGGATGCCTTTCGAT 57.733 50.000 22.79 0.00 33.17 3.59
85 86 2.579873 CATCCTGGATGCCTTTCGATT 58.420 47.619 22.79 0.00 33.17 3.34
86 87 2.806945 TCCTGGATGCCTTTCGATTT 57.193 45.000 0.00 0.00 0.00 2.17
87 88 2.643551 TCCTGGATGCCTTTCGATTTC 58.356 47.619 0.00 0.00 0.00 2.17
88 89 2.239654 TCCTGGATGCCTTTCGATTTCT 59.760 45.455 0.00 0.00 0.00 2.52
89 90 3.019564 CCTGGATGCCTTTCGATTTCTT 58.980 45.455 0.00 0.00 0.00 2.52
90 91 3.181493 CCTGGATGCCTTTCGATTTCTTG 60.181 47.826 0.00 0.00 0.00 3.02
91 92 3.420893 TGGATGCCTTTCGATTTCTTGT 58.579 40.909 0.00 0.00 0.00 3.16
92 93 3.826157 TGGATGCCTTTCGATTTCTTGTT 59.174 39.130 0.00 0.00 0.00 2.83
93 94 4.168760 GGATGCCTTTCGATTTCTTGTTG 58.831 43.478 0.00 0.00 0.00 3.33
94 95 3.641437 TGCCTTTCGATTTCTTGTTGG 57.359 42.857 0.00 0.00 0.00 3.77
95 96 2.955660 TGCCTTTCGATTTCTTGTTGGT 59.044 40.909 0.00 0.00 0.00 3.67
96 97 3.243367 TGCCTTTCGATTTCTTGTTGGTG 60.243 43.478 0.00 0.00 0.00 4.17
97 98 3.308530 CCTTTCGATTTCTTGTTGGTGC 58.691 45.455 0.00 0.00 0.00 5.01
98 99 3.243367 CCTTTCGATTTCTTGTTGGTGCA 60.243 43.478 0.00 0.00 0.00 4.57
99 100 3.624326 TTCGATTTCTTGTTGGTGCAG 57.376 42.857 0.00 0.00 0.00 4.41
100 101 2.844946 TCGATTTCTTGTTGGTGCAGA 58.155 42.857 0.00 0.00 0.00 4.26
101 102 2.807967 TCGATTTCTTGTTGGTGCAGAG 59.192 45.455 0.00 0.00 0.00 3.35
102 103 2.095567 CGATTTCTTGTTGGTGCAGAGG 60.096 50.000 0.00 0.00 0.00 3.69
103 104 1.032014 TTTCTTGTTGGTGCAGAGGC 58.968 50.000 0.00 0.00 41.68 4.70
104 105 0.183492 TTCTTGTTGGTGCAGAGGCT 59.817 50.000 0.00 0.00 41.91 4.58
105 106 0.535780 TCTTGTTGGTGCAGAGGCTG 60.536 55.000 0.00 0.00 41.91 4.85
106 107 1.521450 CTTGTTGGTGCAGAGGCTGG 61.521 60.000 0.00 0.00 41.91 4.85
107 108 2.674380 GTTGGTGCAGAGGCTGGG 60.674 66.667 0.00 0.00 41.91 4.45
108 109 3.177884 TTGGTGCAGAGGCTGGGT 61.178 61.111 0.00 0.00 41.91 4.51
109 110 3.496309 TTGGTGCAGAGGCTGGGTG 62.496 63.158 0.00 0.00 41.91 4.61
110 111 3.958860 GGTGCAGAGGCTGGGTGT 61.959 66.667 0.00 0.00 41.91 4.16
111 112 2.592993 GGTGCAGAGGCTGGGTGTA 61.593 63.158 0.00 0.00 41.91 2.90
112 113 1.374947 GTGCAGAGGCTGGGTGTAA 59.625 57.895 0.00 0.00 41.91 2.41
113 114 0.035056 GTGCAGAGGCTGGGTGTAAT 60.035 55.000 0.00 0.00 41.91 1.89
114 115 0.698238 TGCAGAGGCTGGGTGTAATT 59.302 50.000 0.00 0.00 41.91 1.40
115 116 1.098050 GCAGAGGCTGGGTGTAATTG 58.902 55.000 0.00 0.00 36.96 2.32
116 117 1.755179 CAGAGGCTGGGTGTAATTGG 58.245 55.000 0.00 0.00 0.00 3.16
117 118 1.004745 CAGAGGCTGGGTGTAATTGGT 59.995 52.381 0.00 0.00 0.00 3.67
118 119 2.238646 CAGAGGCTGGGTGTAATTGGTA 59.761 50.000 0.00 0.00 0.00 3.25
119 120 3.117888 CAGAGGCTGGGTGTAATTGGTAT 60.118 47.826 0.00 0.00 0.00 2.73
120 121 3.136626 AGAGGCTGGGTGTAATTGGTATC 59.863 47.826 0.00 0.00 0.00 2.24
121 122 2.174854 AGGCTGGGTGTAATTGGTATCC 59.825 50.000 0.00 0.00 0.00 2.59
122 123 2.174854 GGCTGGGTGTAATTGGTATCCT 59.825 50.000 0.00 0.00 0.00 3.24
123 124 3.477530 GCTGGGTGTAATTGGTATCCTC 58.522 50.000 0.00 0.00 0.00 3.71
124 125 3.728845 CTGGGTGTAATTGGTATCCTCG 58.271 50.000 0.00 0.00 0.00 4.63
125 126 2.158871 TGGGTGTAATTGGTATCCTCGC 60.159 50.000 0.00 0.00 0.00 5.03
126 127 2.132762 GGTGTAATTGGTATCCTCGCG 58.867 52.381 0.00 0.00 0.00 5.87
127 128 2.223876 GGTGTAATTGGTATCCTCGCGA 60.224 50.000 9.26 9.26 0.00 5.87
128 129 3.554337 GGTGTAATTGGTATCCTCGCGAT 60.554 47.826 10.36 0.00 34.73 4.58
129 130 4.321452 GGTGTAATTGGTATCCTCGCGATA 60.321 45.833 10.36 0.38 31.92 2.92
130 131 5.408356 GTGTAATTGGTATCCTCGCGATAT 58.592 41.667 10.36 9.41 35.87 1.63
131 132 5.515626 GTGTAATTGGTATCCTCGCGATATC 59.484 44.000 10.36 0.00 35.87 1.63
132 133 4.801330 AATTGGTATCCTCGCGATATCA 57.199 40.909 10.36 2.58 41.87 2.15
133 134 5.344743 AATTGGTATCCTCGCGATATCAT 57.655 39.130 10.36 1.66 42.84 2.45
134 135 4.801330 TTGGTATCCTCGCGATATCATT 57.199 40.909 10.36 0.00 42.84 2.57
135 136 5.907866 TTGGTATCCTCGCGATATCATTA 57.092 39.130 10.36 0.00 42.84 1.90
136 137 6.465439 TTGGTATCCTCGCGATATCATTAT 57.535 37.500 10.36 0.00 42.84 1.28
137 138 7.576861 TTGGTATCCTCGCGATATCATTATA 57.423 36.000 10.36 0.00 42.84 0.98
138 139 7.761038 TGGTATCCTCGCGATATCATTATAT 57.239 36.000 10.36 0.00 39.26 0.86
139 140 8.178313 TGGTATCCTCGCGATATCATTATATT 57.822 34.615 10.36 0.00 39.26 1.28
140 141 8.297426 TGGTATCCTCGCGATATCATTATATTC 58.703 37.037 10.36 0.00 39.26 1.75
141 142 7.755822 GGTATCCTCGCGATATCATTATATTCC 59.244 40.741 10.36 0.00 35.01 3.01
142 143 6.961360 TCCTCGCGATATCATTATATTCCT 57.039 37.500 10.36 0.00 0.00 3.36
143 144 6.971602 TCCTCGCGATATCATTATATTCCTC 58.028 40.000 10.36 0.00 0.00 3.71
144 145 6.773200 TCCTCGCGATATCATTATATTCCTCT 59.227 38.462 10.36 0.00 0.00 3.69
145 146 7.285629 TCCTCGCGATATCATTATATTCCTCTT 59.714 37.037 10.36 0.00 0.00 2.85
146 147 7.923344 CCTCGCGATATCATTATATTCCTCTTT 59.077 37.037 10.36 0.00 0.00 2.52
147 148 9.307121 CTCGCGATATCATTATATTCCTCTTTT 57.693 33.333 10.36 0.00 0.00 2.27
148 149 9.653287 TCGCGATATCATTATATTCCTCTTTTT 57.347 29.630 3.71 0.00 0.00 1.94
169 170 3.771978 AAAAATGCGTCGGGGCTT 58.228 50.000 0.00 0.00 0.00 4.35
170 171 2.046108 AAAAATGCGTCGGGGCTTT 58.954 47.368 0.00 0.00 32.36 3.51
171 172 0.038618 AAAAATGCGTCGGGGCTTTC 60.039 50.000 0.00 0.00 30.88 2.62
172 173 1.873270 AAAATGCGTCGGGGCTTTCC 61.873 55.000 0.00 0.00 30.88 3.13
181 182 2.405143 GGGGCTTTCCGATTGTAGC 58.595 57.895 0.00 0.00 36.01 3.58
182 183 0.393808 GGGGCTTTCCGATTGTAGCA 60.394 55.000 0.00 0.00 35.36 3.49
183 184 1.680338 GGGCTTTCCGATTGTAGCAT 58.320 50.000 0.00 0.00 35.36 3.79
184 185 1.334869 GGGCTTTCCGATTGTAGCATG 59.665 52.381 0.00 0.00 35.36 4.06
185 186 2.017049 GGCTTTCCGATTGTAGCATGT 58.983 47.619 0.00 0.00 35.36 3.21
186 187 2.423538 GGCTTTCCGATTGTAGCATGTT 59.576 45.455 0.00 0.00 35.36 2.71
187 188 3.119495 GGCTTTCCGATTGTAGCATGTTT 60.119 43.478 0.00 0.00 35.36 2.83
188 189 4.098416 GCTTTCCGATTGTAGCATGTTTC 58.902 43.478 0.00 0.00 33.88 2.78
189 190 4.379394 GCTTTCCGATTGTAGCATGTTTCA 60.379 41.667 0.00 0.00 33.88 2.69
190 191 4.944962 TTCCGATTGTAGCATGTTTCAG 57.055 40.909 0.00 0.00 0.00 3.02
191 192 3.270027 TCCGATTGTAGCATGTTTCAGG 58.730 45.455 0.00 0.00 0.00 3.86
192 193 3.055458 TCCGATTGTAGCATGTTTCAGGA 60.055 43.478 0.00 0.00 0.00 3.86
193 194 3.879295 CCGATTGTAGCATGTTTCAGGAT 59.121 43.478 0.00 0.00 0.00 3.24
194 195 4.336433 CCGATTGTAGCATGTTTCAGGATT 59.664 41.667 0.00 0.00 0.00 3.01
195 196 5.527214 CCGATTGTAGCATGTTTCAGGATTA 59.473 40.000 0.00 0.00 0.00 1.75
196 197 6.038161 CCGATTGTAGCATGTTTCAGGATTAA 59.962 38.462 0.00 0.00 0.00 1.40
197 198 7.128331 CGATTGTAGCATGTTTCAGGATTAAG 58.872 38.462 0.00 0.00 0.00 1.85
198 199 7.011389 CGATTGTAGCATGTTTCAGGATTAAGA 59.989 37.037 0.00 0.00 0.00 2.10
199 200 8.757982 ATTGTAGCATGTTTCAGGATTAAGAT 57.242 30.769 0.00 0.00 0.00 2.40
200 201 9.851686 ATTGTAGCATGTTTCAGGATTAAGATA 57.148 29.630 0.00 0.00 0.00 1.98
201 202 8.662781 TGTAGCATGTTTCAGGATTAAGATAC 57.337 34.615 0.00 0.00 0.00 2.24
202 203 8.264347 TGTAGCATGTTTCAGGATTAAGATACA 58.736 33.333 0.00 0.00 31.93 2.29
203 204 9.109393 GTAGCATGTTTCAGGATTAAGATACAA 57.891 33.333 0.00 0.00 31.34 2.41
204 205 8.218338 AGCATGTTTCAGGATTAAGATACAAG 57.782 34.615 0.00 0.00 31.34 3.16
212 213 9.618890 TTCAGGATTAAGATACAAGGAATTGAG 57.381 33.333 0.00 0.00 0.00 3.02
223 224 4.202567 ACAAGGAATTGAGAGTGCCCTAAA 60.203 41.667 0.00 0.00 0.00 1.85
350 351 6.895898 TCACGGTATCTATTCGTATTGACTC 58.104 40.000 0.00 0.00 35.23 3.36
411 414 8.924511 AGTTTGCACTATAGCCAAATATATGT 57.075 30.769 17.21 0.00 0.00 2.29
486 492 6.322712 AGTCTTTCCGATTCTAGACTTAGCAT 59.677 38.462 0.00 0.00 43.49 3.79
487 493 7.502895 AGTCTTTCCGATTCTAGACTTAGCATA 59.497 37.037 0.00 0.00 43.49 3.14
489 495 8.861086 TCTTTCCGATTCTAGACTTAGCATATT 58.139 33.333 0.00 0.00 0.00 1.28
513 519 2.711542 GTATGGGCACTTAGTTGCAGT 58.288 47.619 8.51 0.00 44.94 4.40
517 523 1.298859 GGCACTTAGTTGCAGTCGGG 61.299 60.000 8.51 0.00 44.94 5.14
522 528 2.104281 ACTTAGTTGCAGTCGGGAGTTT 59.896 45.455 0.00 0.00 0.00 2.66
523 529 2.163818 TAGTTGCAGTCGGGAGTTTG 57.836 50.000 0.00 0.00 0.00 2.93
527 533 0.534203 TGCAGTCGGGAGTTTGTTCC 60.534 55.000 0.00 0.00 36.46 3.62
538 544 4.004314 GGAGTTTGTTCCCTAGAAGCTTC 58.996 47.826 19.11 19.11 30.91 3.86
539 545 4.263112 GGAGTTTGTTCCCTAGAAGCTTCT 60.263 45.833 30.63 30.63 41.24 2.85
562 570 5.321102 TGAAAGAGCAAAATAGGGTAGCAA 58.679 37.500 0.00 0.00 0.00 3.91
584 592 7.814107 AGCAAATTGTTGGGCATTATATTATCG 59.186 33.333 0.00 0.00 35.10 2.92
588 596 7.994425 TTGTTGGGCATTATATTATCGTGAT 57.006 32.000 0.00 0.00 0.00 3.06
589 597 7.376435 TGTTGGGCATTATATTATCGTGATG 57.624 36.000 0.00 0.00 0.00 3.07
590 598 7.164803 TGTTGGGCATTATATTATCGTGATGA 58.835 34.615 0.00 0.00 0.00 2.92
592 600 5.817296 TGGGCATTATATTATCGTGATGAGC 59.183 40.000 0.00 0.00 0.00 4.26
593 601 5.050769 GGGCATTATATTATCGTGATGAGCG 60.051 44.000 0.00 0.00 0.00 5.03
594 602 5.050769 GGCATTATATTATCGTGATGAGCGG 60.051 44.000 0.00 0.00 0.00 5.52
690 698 5.862323 GGAATAAAACTTCCTTTTTCCTCGC 59.138 40.000 0.00 0.00 41.32 5.03
750 763 3.674281 ACACATAATGCACAAATGTTGCG 59.326 39.130 7.48 1.56 31.60 4.85
752 765 1.334994 TAATGCACAAATGTTGCGCG 58.665 45.000 0.00 0.00 41.41 6.86
770 783 1.313812 CGTCCTGCCTAGTCTTCCGT 61.314 60.000 0.00 0.00 0.00 4.69
791 804 5.064579 CCGTTTGAGCCAAAGATTTGTTTTT 59.935 36.000 4.71 0.00 33.82 1.94
822 836 0.859232 TTTGCGTTCGAGCTGACTTC 59.141 50.000 0.00 0.00 38.13 3.01
958 986 6.456795 TCAGTAGAAGTGACATATCAGTGG 57.543 41.667 0.00 0.00 38.58 4.00
1008 1045 3.588742 GGTGGTTACCATGGGGAAG 57.411 57.895 18.09 0.00 46.71 3.46
1049 1086 3.123050 GCATTTCGCTGTTTGAAGGTTT 58.877 40.909 0.00 0.00 37.77 3.27
1144 1190 0.887247 TTCCACCGATTGCACATTGG 59.113 50.000 11.50 11.50 0.00 3.16
1152 1198 5.469760 CACCGATTGCACATTGGAAGATATA 59.530 40.000 17.22 0.00 29.36 0.86
1230 1297 1.330829 GCGAGCATTAAGGCAAGTACC 59.669 52.381 15.35 0.00 35.83 3.34
1237 1310 6.398095 AGCATTAAGGCAAGTACCATTTTTC 58.602 36.000 15.35 0.00 35.83 2.29
1283 1381 5.772825 TGGATTTGTGTTCCTTCTTCTTG 57.227 39.130 0.00 0.00 34.17 3.02
1356 2290 2.287069 CCCGATACGAGCTCTGTACAAG 60.287 54.545 12.85 9.93 0.00 3.16
1618 2598 8.484641 ACTTGTGATCTTGTGATATACTGTTG 57.515 34.615 0.00 0.00 32.19 3.33
1621 2601 6.758416 TGTGATCTTGTGATATACTGTTGCTC 59.242 38.462 0.00 0.00 32.19 4.26
1868 2880 1.066454 CGACGCCAAAAAGGGAAACTT 59.934 47.619 0.00 0.00 42.52 2.66
1869 2881 2.291190 CGACGCCAAAAAGGGAAACTTA 59.709 45.455 0.00 0.00 38.85 2.24
1964 2985 2.932234 CGAGTGGGAAGAGCACCGT 61.932 63.158 0.00 0.00 0.00 4.83
3133 4166 2.384375 TCAAGGTGTAGGGACTAGGGAA 59.616 50.000 0.00 0.00 44.14 3.97
3176 4211 5.093169 GCAGCTTAGTTTCATCTGCTATG 57.907 43.478 5.40 0.00 44.71 2.23
3179 4214 6.258727 GCAGCTTAGTTTCATCTGCTATGTAA 59.741 38.462 5.40 0.00 44.71 2.41
3181 4216 8.119226 CAGCTTAGTTTCATCTGCTATGTAAAC 58.881 37.037 13.33 13.33 0.00 2.01
3186 4221 8.202745 AGTTTCATCTGCTATGTAAACTAAGC 57.797 34.615 17.64 0.00 35.89 3.09
3188 4223 9.314321 GTTTCATCTGCTATGTAAACTAAGCTA 57.686 33.333 0.00 0.03 35.95 3.32
3190 4225 9.698309 TTCATCTGCTATGTAAACTAAGCTATC 57.302 33.333 0.00 0.00 35.95 2.08
3191 4226 9.083422 TCATCTGCTATGTAAACTAAGCTATCT 57.917 33.333 0.00 0.00 35.95 1.98
3192 4227 9.703892 CATCTGCTATGTAAACTAAGCTATCTT 57.296 33.333 0.00 0.00 35.95 2.40
3193 4228 9.921637 ATCTGCTATGTAAACTAAGCTATCTTC 57.078 33.333 0.00 0.00 35.95 2.87
3239 4275 4.051237 TCTTCAGAAATATCATCGCCACG 58.949 43.478 0.00 0.00 0.00 4.94
3242 4278 3.006859 TCAGAAATATCATCGCCACGGAT 59.993 43.478 0.00 0.00 0.00 4.18
3268 4304 2.307098 ACCTCTTTGATGGGGAGAACAG 59.693 50.000 0.00 0.00 0.00 3.16
3269 4305 2.307098 CCTCTTTGATGGGGAGAACAGT 59.693 50.000 0.00 0.00 0.00 3.55
3277 4313 4.406972 TGATGGGGAGAACAGTTAGATGAG 59.593 45.833 0.00 0.00 0.00 2.90
3287 4323 0.370273 GTTAGATGAGCCGTTGCGTG 59.630 55.000 0.00 0.00 44.33 5.34
3288 4324 0.739462 TTAGATGAGCCGTTGCGTGG 60.739 55.000 0.00 0.00 44.33 4.94
3301 4337 0.391130 TGCGTGGTTGGCATAGAGAC 60.391 55.000 0.00 0.00 35.04 3.36
3324 4360 1.873591 ACTGCAGCACGAAAGTTAAGG 59.126 47.619 15.27 0.00 46.40 2.69
3366 4402 6.604735 ACTAAGAAGTTAAGCAACACTGTG 57.395 37.500 6.19 6.19 37.10 3.66
3392 4428 4.155462 CAGCATGTCTAACAAATGTCTGCT 59.845 41.667 0.00 0.00 37.90 4.24
3408 4444 5.162637 TGTCTGCTATATAAATCACCCCCT 58.837 41.667 0.00 0.00 0.00 4.79
3426 4463 4.202609 CCCCCTAAGGACATTAGCATGAAT 60.203 45.833 0.00 0.00 39.76 2.57
3427 4464 5.014123 CCCCCTAAGGACATTAGCATGAATA 59.986 44.000 0.00 0.00 39.76 1.75
3429 4466 7.177878 CCCCTAAGGACATTAGCATGAATAAT 58.822 38.462 0.00 0.00 39.76 1.28
3430 4467 7.671398 CCCCTAAGGACATTAGCATGAATAATT 59.329 37.037 0.00 0.00 39.76 1.40
3487 5494 6.834876 TCAGATGTGAATGAACGAATCAAAG 58.165 36.000 0.00 0.00 42.54 2.77
3502 5509 7.649057 ACGAATCAAAGCTAAAATATAAGCCC 58.351 34.615 0.00 0.00 39.64 5.19
3513 5520 7.148804 GCTAAAATATAAGCCCAAAAATAGCGC 60.149 37.037 0.00 0.00 32.40 5.92
3515 5522 1.740297 TAAGCCCAAAAATAGCGCGA 58.260 45.000 12.10 0.00 0.00 5.87
3532 5539 4.083537 AGCGCGAAACAATCTATGAACAAA 60.084 37.500 12.10 0.00 0.00 2.83
3572 5579 7.701539 TTGTGAATTACCTGCAACTGAATAT 57.298 32.000 0.00 0.00 0.00 1.28
3577 5584 5.794687 TTACCTGCAACTGAATATGTTCG 57.205 39.130 0.00 0.00 37.15 3.95
3596 5603 7.220599 TGTTCGTATTACATTTACTAACGGC 57.779 36.000 0.00 0.00 31.45 5.68
3609 5616 0.733566 TAACGGCCGACAACGATGAC 60.734 55.000 35.90 0.00 42.66 3.06
3633 5640 7.042335 ACCGTTTCCTATGTTTTCTCTATCAG 58.958 38.462 0.00 0.00 0.00 2.90
3644 5651 6.071952 TGTTTTCTCTATCAGAATTGTTGCCC 60.072 38.462 0.00 0.00 41.02 5.36
3653 5660 4.022068 TCAGAATTGTTGCCCATGTCTTTC 60.022 41.667 0.00 0.00 0.00 2.62
3699 5706 5.501156 GTTCTTGAGGACATGGGATAAACT 58.499 41.667 0.00 0.00 0.00 2.66
3711 5718 9.555727 GACATGGGATAAACTTTATTGCTAGTA 57.444 33.333 0.00 0.00 0.00 1.82
3731 5738 8.599774 GCTAGTAATCTTGTGAAGTTGAATCTC 58.400 37.037 0.00 0.00 0.00 2.75
3732 5739 9.645059 CTAGTAATCTTGTGAAGTTGAATCTCA 57.355 33.333 0.00 0.00 0.00 3.27
3782 5789 8.148351 TGGTGTAATTCTCTAATAGTGGTATGC 58.852 37.037 0.00 0.00 0.00 3.14
3783 5790 7.328737 GGTGTAATTCTCTAATAGTGGTATGCG 59.671 40.741 0.00 0.00 0.00 4.73
3784 5791 8.080417 GTGTAATTCTCTAATAGTGGTATGCGA 58.920 37.037 0.00 0.00 0.00 5.10
3785 5792 8.635328 TGTAATTCTCTAATAGTGGTATGCGAA 58.365 33.333 0.00 0.00 0.00 4.70
3786 5793 7.948278 AATTCTCTAATAGTGGTATGCGAAC 57.052 36.000 0.00 0.00 0.00 3.95
3787 5794 6.459670 TTCTCTAATAGTGGTATGCGAACA 57.540 37.500 0.00 0.00 0.00 3.18
3788 5795 6.650427 TCTCTAATAGTGGTATGCGAACAT 57.350 37.500 0.00 0.00 40.49 2.71
3789 5796 6.678878 TCTCTAATAGTGGTATGCGAACATC 58.321 40.000 0.00 0.00 37.74 3.06
3790 5797 5.458015 TCTAATAGTGGTATGCGAACATCG 58.542 41.667 0.00 0.00 43.89 3.84
3791 5798 4.316205 AATAGTGGTATGCGAACATCGA 57.684 40.909 3.61 0.00 43.74 3.59
3792 5799 2.890808 AGTGGTATGCGAACATCGAT 57.109 45.000 3.61 0.00 43.74 3.59
3793 5800 3.179443 AGTGGTATGCGAACATCGATT 57.821 42.857 3.61 0.00 43.74 3.34
3794 5801 3.531538 AGTGGTATGCGAACATCGATTT 58.468 40.909 3.61 0.00 43.74 2.17
3795 5802 3.555956 AGTGGTATGCGAACATCGATTTC 59.444 43.478 3.61 2.86 43.74 2.17
3796 5803 3.308595 GTGGTATGCGAACATCGATTTCA 59.691 43.478 15.70 3.77 43.74 2.69
3797 5804 3.555547 TGGTATGCGAACATCGATTTCAG 59.444 43.478 15.70 11.21 43.74 3.02
3798 5805 3.802139 GGTATGCGAACATCGATTTCAGA 59.198 43.478 15.70 6.18 43.74 3.27
3799 5806 4.449068 GGTATGCGAACATCGATTTCAGAT 59.551 41.667 15.70 10.76 43.74 2.90
3800 5807 5.633601 GGTATGCGAACATCGATTTCAGATA 59.366 40.000 15.70 10.13 43.74 1.98
3801 5808 6.145534 GGTATGCGAACATCGATTTCAGATAA 59.854 38.462 15.70 2.81 43.74 1.75
3802 5809 5.389642 TGCGAACATCGATTTCAGATAAC 57.610 39.130 15.70 4.06 43.74 1.89
3803 5810 5.109210 TGCGAACATCGATTTCAGATAACT 58.891 37.500 15.70 0.00 43.74 2.24
3804 5811 5.580691 TGCGAACATCGATTTCAGATAACTT 59.419 36.000 15.70 0.00 43.74 2.66
3805 5812 6.123441 GCGAACATCGATTTCAGATAACTTC 58.877 40.000 15.70 0.00 43.74 3.01
3806 5813 6.237835 GCGAACATCGATTTCAGATAACTTCA 60.238 38.462 15.70 0.00 43.74 3.02
3807 5814 7.113658 CGAACATCGATTTCAGATAACTTCAC 58.886 38.462 15.70 0.00 43.74 3.18
3808 5815 6.910536 ACATCGATTTCAGATAACTTCACC 57.089 37.500 0.00 0.00 0.00 4.02
3809 5816 5.520288 ACATCGATTTCAGATAACTTCACCG 59.480 40.000 0.00 0.00 0.00 4.94
3810 5817 4.430007 TCGATTTCAGATAACTTCACCGG 58.570 43.478 0.00 0.00 0.00 5.28
3811 5818 4.081862 TCGATTTCAGATAACTTCACCGGT 60.082 41.667 0.00 0.00 0.00 5.28
3812 5819 4.032900 CGATTTCAGATAACTTCACCGGTG 59.967 45.833 29.26 29.26 0.00 4.94
3813 5820 3.328382 TTCAGATAACTTCACCGGTGG 57.672 47.619 33.40 20.99 0.00 4.61
3814 5821 1.553248 TCAGATAACTTCACCGGTGGG 59.447 52.381 33.40 26.37 40.11 4.61
3826 5833 4.906537 GGTGGGTGCCAAACGGGT 62.907 66.667 0.00 0.00 39.65 5.28
3827 5834 3.601685 GTGGGTGCCAAACGGGTG 61.602 66.667 0.00 0.00 39.65 4.61
3828 5835 4.904590 TGGGTGCCAAACGGGTGG 62.905 66.667 2.37 2.37 42.05 4.61
3840 5847 3.789290 GGGTGGCCCGGACGTATT 61.789 66.667 0.73 0.00 32.13 1.89
3841 5848 2.269883 GGTGGCCCGGACGTATTT 59.730 61.111 0.73 0.00 0.00 1.40
3842 5849 1.521616 GGTGGCCCGGACGTATTTA 59.478 57.895 0.73 0.00 0.00 1.40
3843 5850 0.107268 GGTGGCCCGGACGTATTTAT 59.893 55.000 0.73 0.00 0.00 1.40
3844 5851 1.475571 GGTGGCCCGGACGTATTTATT 60.476 52.381 0.73 0.00 0.00 1.40
3845 5852 1.600485 GTGGCCCGGACGTATTTATTG 59.400 52.381 0.73 0.00 0.00 1.90
3846 5853 1.485480 TGGCCCGGACGTATTTATTGA 59.515 47.619 0.73 0.00 0.00 2.57
3847 5854 2.140717 GGCCCGGACGTATTTATTGAG 58.859 52.381 0.73 0.00 0.00 3.02
3848 5855 1.529865 GCCCGGACGTATTTATTGAGC 59.470 52.381 0.73 0.00 0.00 4.26
3849 5856 2.140717 CCCGGACGTATTTATTGAGCC 58.859 52.381 0.73 0.00 0.00 4.70
3850 5857 2.140717 CCGGACGTATTTATTGAGCCC 58.859 52.381 0.00 0.00 0.00 5.19
3851 5858 1.790623 CGGACGTATTTATTGAGCCCG 59.209 52.381 0.00 0.00 0.00 6.13
3852 5859 2.140717 GGACGTATTTATTGAGCCCGG 58.859 52.381 0.00 0.00 0.00 5.73
3853 5860 2.484241 GGACGTATTTATTGAGCCCGGT 60.484 50.000 0.00 0.00 0.00 5.28
3854 5861 3.200483 GACGTATTTATTGAGCCCGGTT 58.800 45.455 0.00 0.00 0.00 4.44
3855 5862 2.940410 ACGTATTTATTGAGCCCGGTTG 59.060 45.455 0.00 0.00 0.00 3.77
3856 5863 2.289547 CGTATTTATTGAGCCCGGTTGG 59.710 50.000 0.00 0.00 37.09 3.77
3883 5890 4.778415 GCGCGCCGTCTTCAGAGA 62.778 66.667 23.24 0.00 0.00 3.10
3893 5900 0.322975 TCTTCAGAGACTGGGCAAGC 59.677 55.000 0.00 0.00 31.51 4.01
3894 5901 0.676151 CTTCAGAGACTGGGCAAGCC 60.676 60.000 1.52 1.52 31.51 4.35
3895 5902 1.418097 TTCAGAGACTGGGCAAGCCA 61.418 55.000 13.87 0.00 37.98 4.75
3896 5903 1.376942 CAGAGACTGGGCAAGCCAG 60.377 63.158 13.87 10.64 40.72 4.85
3898 5905 1.073897 GAGACTGGGCAAGCCAGTT 59.926 57.895 13.55 5.19 46.81 3.16
3899 5906 0.324943 GAGACTGGGCAAGCCAGTTA 59.675 55.000 13.55 0.00 46.81 2.24
3900 5907 0.326264 AGACTGGGCAAGCCAGTTAG 59.674 55.000 13.55 7.73 46.81 2.34
3901 5908 1.303643 ACTGGGCAAGCCAGTTAGC 60.304 57.895 13.87 0.00 44.89 3.09
3902 5909 1.303561 CTGGGCAAGCCAGTTAGCA 60.304 57.895 13.87 0.00 37.98 3.49
3903 5910 0.682209 CTGGGCAAGCCAGTTAGCAT 60.682 55.000 13.87 0.00 37.98 3.79
3904 5911 0.251742 TGGGCAAGCCAGTTAGCATT 60.252 50.000 13.87 0.00 37.98 3.56
3905 5912 0.897621 GGGCAAGCCAGTTAGCATTT 59.102 50.000 13.87 0.00 37.98 2.32
3906 5913 1.134995 GGGCAAGCCAGTTAGCATTTC 60.135 52.381 13.87 0.00 37.98 2.17
3907 5914 1.468054 GGCAAGCCAGTTAGCATTTCG 60.468 52.381 6.14 0.00 35.81 3.46
3908 5915 1.900237 CAAGCCAGTTAGCATTTCGC 58.100 50.000 0.00 0.00 42.91 4.70
3909 5916 0.811281 AAGCCAGTTAGCATTTCGCC 59.189 50.000 0.00 0.00 44.04 5.54
3910 5917 0.322456 AGCCAGTTAGCATTTCGCCA 60.322 50.000 0.00 0.00 44.04 5.69
3911 5918 0.740737 GCCAGTTAGCATTTCGCCAT 59.259 50.000 0.00 0.00 44.04 4.40
3912 5919 1.268743 GCCAGTTAGCATTTCGCCATC 60.269 52.381 0.00 0.00 44.04 3.51
3913 5920 1.334869 CCAGTTAGCATTTCGCCATCC 59.665 52.381 0.00 0.00 44.04 3.51
3914 5921 2.016318 CAGTTAGCATTTCGCCATCCA 58.984 47.619 0.00 0.00 44.04 3.41
3915 5922 2.620115 CAGTTAGCATTTCGCCATCCAT 59.380 45.455 0.00 0.00 44.04 3.41
3916 5923 3.067180 CAGTTAGCATTTCGCCATCCATT 59.933 43.478 0.00 0.00 44.04 3.16
3917 5924 4.275689 CAGTTAGCATTTCGCCATCCATTA 59.724 41.667 0.00 0.00 44.04 1.90
3918 5925 5.048504 CAGTTAGCATTTCGCCATCCATTAT 60.049 40.000 0.00 0.00 44.04 1.28
3919 5926 5.536161 AGTTAGCATTTCGCCATCCATTATT 59.464 36.000 0.00 0.00 44.04 1.40
3920 5927 4.942761 AGCATTTCGCCATCCATTATTT 57.057 36.364 0.00 0.00 44.04 1.40
3921 5928 5.280654 AGCATTTCGCCATCCATTATTTT 57.719 34.783 0.00 0.00 44.04 1.82
3922 5929 6.403866 AGCATTTCGCCATCCATTATTTTA 57.596 33.333 0.00 0.00 44.04 1.52
3923 5930 6.215845 AGCATTTCGCCATCCATTATTTTAC 58.784 36.000 0.00 0.00 44.04 2.01
3924 5931 5.116983 GCATTTCGCCATCCATTATTTTACG 59.883 40.000 0.00 0.00 32.94 3.18
3925 5932 6.434596 CATTTCGCCATCCATTATTTTACGA 58.565 36.000 0.00 0.00 0.00 3.43
3926 5933 6.627395 TTTCGCCATCCATTATTTTACGAT 57.373 33.333 0.00 0.00 0.00 3.73
3927 5934 6.627395 TTCGCCATCCATTATTTTACGATT 57.373 33.333 0.00 0.00 0.00 3.34
3928 5935 5.996219 TCGCCATCCATTATTTTACGATTG 58.004 37.500 0.00 0.00 0.00 2.67
3929 5936 4.616802 CGCCATCCATTATTTTACGATTGC 59.383 41.667 0.00 0.00 0.00 3.56
3930 5937 5.562696 CGCCATCCATTATTTTACGATTGCT 60.563 40.000 0.00 0.00 0.00 3.91
3931 5938 6.215845 GCCATCCATTATTTTACGATTGCTT 58.784 36.000 0.00 0.00 0.00 3.91
3932 5939 6.363357 GCCATCCATTATTTTACGATTGCTTC 59.637 38.462 0.00 0.00 0.00 3.86
3933 5940 7.651808 CCATCCATTATTTTACGATTGCTTCT 58.348 34.615 0.00 0.00 0.00 2.85
3934 5941 8.783093 CCATCCATTATTTTACGATTGCTTCTA 58.217 33.333 0.00 0.00 0.00 2.10
3942 5949 8.713765 ATTTTACGATTGCTTCTATTTATGCG 57.286 30.769 0.00 0.00 0.00 4.73
3943 5950 7.471657 TTTACGATTGCTTCTATTTATGCGA 57.528 32.000 0.00 0.00 0.00 5.10
3944 5951 5.582439 ACGATTGCTTCTATTTATGCGAG 57.418 39.130 0.00 0.00 0.00 5.03
3945 5952 5.289595 ACGATTGCTTCTATTTATGCGAGA 58.710 37.500 0.00 0.00 0.00 4.04
3946 5953 5.175856 ACGATTGCTTCTATTTATGCGAGAC 59.824 40.000 0.00 0.00 0.00 3.36
3947 5954 5.175673 CGATTGCTTCTATTTATGCGAGACA 59.824 40.000 0.00 0.00 0.00 3.41
3948 5955 6.292328 CGATTGCTTCTATTTATGCGAGACAA 60.292 38.462 0.00 0.00 0.00 3.18
3949 5956 6.735678 TTGCTTCTATTTATGCGAGACAAA 57.264 33.333 0.00 0.00 0.00 2.83
3950 5957 6.735678 TGCTTCTATTTATGCGAGACAAAA 57.264 33.333 0.00 0.00 0.00 2.44
3951 5958 7.139896 TGCTTCTATTTATGCGAGACAAAAA 57.860 32.000 0.00 0.00 0.00 1.94
3952 5959 7.243487 TGCTTCTATTTATGCGAGACAAAAAG 58.757 34.615 0.00 0.00 0.00 2.27
3953 5960 6.688813 GCTTCTATTTATGCGAGACAAAAAGG 59.311 38.462 0.00 0.00 0.00 3.11
3954 5961 7.626452 GCTTCTATTTATGCGAGACAAAAAGGT 60.626 37.037 0.00 0.00 0.00 3.50
3955 5962 8.780846 TTCTATTTATGCGAGACAAAAAGGTA 57.219 30.769 0.00 0.00 0.00 3.08
3956 5963 8.780846 TCTATTTATGCGAGACAAAAAGGTAA 57.219 30.769 0.00 0.00 0.00 2.85
3957 5964 8.662141 TCTATTTATGCGAGACAAAAAGGTAAC 58.338 33.333 0.00 0.00 0.00 2.50
3958 5965 5.616488 TTATGCGAGACAAAAAGGTAACC 57.384 39.130 0.00 0.00 37.17 2.85
3959 5966 2.920524 TGCGAGACAAAAAGGTAACCA 58.079 42.857 0.00 0.00 37.17 3.67
3960 5967 3.280295 TGCGAGACAAAAAGGTAACCAA 58.720 40.909 0.00 0.00 37.17 3.67
3961 5968 3.065648 TGCGAGACAAAAAGGTAACCAAC 59.934 43.478 0.00 0.00 37.17 3.77
3962 5969 3.065648 GCGAGACAAAAAGGTAACCAACA 59.934 43.478 0.00 0.00 37.17 3.33
3963 5970 4.261447 GCGAGACAAAAAGGTAACCAACAT 60.261 41.667 0.00 0.00 37.17 2.71
3964 5971 5.049267 GCGAGACAAAAAGGTAACCAACATA 60.049 40.000 0.00 0.00 37.17 2.29
3965 5972 6.599437 CGAGACAAAAAGGTAACCAACATAG 58.401 40.000 0.00 0.00 37.17 2.23
3966 5973 6.204108 CGAGACAAAAAGGTAACCAACATAGT 59.796 38.462 0.00 0.00 37.17 2.12
3967 5974 7.255001 CGAGACAAAAAGGTAACCAACATAGTT 60.255 37.037 0.00 0.00 37.17 2.24
3968 5975 7.937649 AGACAAAAAGGTAACCAACATAGTTC 58.062 34.615 0.00 0.00 37.17 3.01
3969 5976 7.558444 AGACAAAAAGGTAACCAACATAGTTCA 59.442 33.333 0.00 0.00 37.17 3.18
3970 5977 7.485810 ACAAAAAGGTAACCAACATAGTTCAC 58.514 34.615 0.00 0.00 37.17 3.18
3971 5978 6.644248 AAAAGGTAACCAACATAGTTCACC 57.356 37.500 0.00 0.00 37.17 4.02
3972 5979 5.578157 AAGGTAACCAACATAGTTCACCT 57.422 39.130 0.00 0.00 36.73 4.00
3973 5980 6.691255 AAGGTAACCAACATAGTTCACCTA 57.309 37.500 0.00 0.00 34.10 3.08
3974 5981 6.046290 AGGTAACCAACATAGTTCACCTAC 57.954 41.667 0.00 0.00 33.46 3.18
3975 5982 5.046087 AGGTAACCAACATAGTTCACCTACC 60.046 44.000 0.00 0.00 33.46 3.18
3976 5983 5.046087 GGTAACCAACATAGTTCACCTACCT 60.046 44.000 0.00 0.00 0.00 3.08
3977 5984 5.578157 AACCAACATAGTTCACCTACCTT 57.422 39.130 0.00 0.00 0.00 3.50
3978 5985 5.578157 ACCAACATAGTTCACCTACCTTT 57.422 39.130 0.00 0.00 0.00 3.11
3979 5986 5.557866 ACCAACATAGTTCACCTACCTTTC 58.442 41.667 0.00 0.00 0.00 2.62
3980 5987 4.630069 CCAACATAGTTCACCTACCTTTCG 59.370 45.833 0.00 0.00 0.00 3.46
3981 5988 5.475719 CAACATAGTTCACCTACCTTTCGA 58.524 41.667 0.00 0.00 0.00 3.71
3982 5989 5.733620 ACATAGTTCACCTACCTTTCGAA 57.266 39.130 0.00 0.00 0.00 3.71
3983 5990 5.721232 ACATAGTTCACCTACCTTTCGAAG 58.279 41.667 0.00 0.00 0.00 3.79
3984 5991 5.479375 ACATAGTTCACCTACCTTTCGAAGA 59.521 40.000 0.00 0.00 0.00 2.87
3985 5992 6.154706 ACATAGTTCACCTACCTTTCGAAGAT 59.845 38.462 0.00 0.00 35.04 2.40
3986 5993 4.822026 AGTTCACCTACCTTTCGAAGATG 58.178 43.478 0.00 0.00 35.04 2.90
3987 5994 3.247006 TCACCTACCTTTCGAAGATGC 57.753 47.619 0.00 0.00 35.04 3.91
3988 5995 2.565391 TCACCTACCTTTCGAAGATGCA 59.435 45.455 0.00 0.00 35.04 3.96
3989 5996 3.197766 TCACCTACCTTTCGAAGATGCAT 59.802 43.478 0.00 0.00 35.04 3.96
3990 5997 3.557595 CACCTACCTTTCGAAGATGCATC 59.442 47.826 19.37 19.37 35.04 3.91
3991 5998 3.452627 ACCTACCTTTCGAAGATGCATCT 59.547 43.478 23.75 23.75 39.22 2.90
3992 5999 4.649674 ACCTACCTTTCGAAGATGCATCTA 59.350 41.667 28.92 11.64 35.76 1.98
3993 6000 4.985409 CCTACCTTTCGAAGATGCATCTAC 59.015 45.833 28.92 2.29 35.76 2.59
3994 6001 3.448686 ACCTTTCGAAGATGCATCTACG 58.551 45.455 28.92 11.20 35.76 3.51
3995 6002 3.130516 ACCTTTCGAAGATGCATCTACGA 59.869 43.478 28.92 18.18 35.76 3.43
3996 6003 4.112634 CCTTTCGAAGATGCATCTACGAA 58.887 43.478 28.92 21.63 35.76 3.85
3997 6004 4.208047 CCTTTCGAAGATGCATCTACGAAG 59.792 45.833 28.92 24.80 39.96 3.79
3998 6005 4.371855 TTCGAAGATGCATCTACGAAGT 57.628 40.909 28.92 12.81 40.92 3.01
3999 6006 4.371855 TCGAAGATGCATCTACGAAGTT 57.628 40.909 28.92 12.04 45.11 2.66
4000 6007 5.494632 TCGAAGATGCATCTACGAAGTTA 57.505 39.130 28.92 6.92 45.11 2.24
4001 6008 5.886992 TCGAAGATGCATCTACGAAGTTAA 58.113 37.500 28.92 5.44 45.11 2.01
4002 6009 6.504398 TCGAAGATGCATCTACGAAGTTAAT 58.496 36.000 28.92 9.73 45.11 1.40
4003 6010 7.645402 TCGAAGATGCATCTACGAAGTTAATA 58.355 34.615 28.92 2.81 45.11 0.98
4004 6011 7.590322 TCGAAGATGCATCTACGAAGTTAATAC 59.410 37.037 28.92 0.13 45.11 1.89
4005 6012 7.591795 CGAAGATGCATCTACGAAGTTAATACT 59.408 37.037 28.92 8.52 45.11 2.12
4006 6013 8.804688 AAGATGCATCTACGAAGTTAATACTC 57.195 34.615 28.92 0.00 45.11 2.59
4007 6014 7.371936 AGATGCATCTACGAAGTTAATACTCC 58.628 38.462 27.73 0.00 37.78 3.85
4008 6015 5.516996 TGCATCTACGAAGTTAATACTCCG 58.483 41.667 0.00 0.00 37.78 4.63
4009 6016 4.382160 GCATCTACGAAGTTAATACTCCGC 59.618 45.833 0.00 0.00 37.78 5.54
4010 6017 4.558538 TCTACGAAGTTAATACTCCGCC 57.441 45.455 0.00 0.00 37.78 6.13
4011 6018 4.202441 TCTACGAAGTTAATACTCCGCCT 58.798 43.478 0.00 0.00 37.78 5.52
4012 6019 3.881937 ACGAAGTTAATACTCCGCCTT 57.118 42.857 0.00 0.00 37.78 4.35
4013 6020 4.198028 ACGAAGTTAATACTCCGCCTTT 57.802 40.909 0.00 0.00 37.78 3.11
4014 6021 3.930848 ACGAAGTTAATACTCCGCCTTTG 59.069 43.478 0.00 0.00 37.78 2.77
4015 6022 3.930848 CGAAGTTAATACTCCGCCTTTGT 59.069 43.478 0.00 0.00 31.99 2.83
4016 6023 4.201685 CGAAGTTAATACTCCGCCTTTGTG 60.202 45.833 0.00 0.00 31.99 3.33
4017 6024 3.007635 AGTTAATACTCCGCCTTTGTGC 58.992 45.455 0.00 0.00 0.00 4.57
4018 6025 2.032680 TAATACTCCGCCTTTGTGCC 57.967 50.000 0.00 0.00 0.00 5.01
4019 6026 0.037590 AATACTCCGCCTTTGTGCCA 59.962 50.000 0.00 0.00 0.00 4.92
4020 6027 0.037590 ATACTCCGCCTTTGTGCCAA 59.962 50.000 0.00 0.00 0.00 4.52
4021 6028 0.605319 TACTCCGCCTTTGTGCCAAG 60.605 55.000 0.00 0.00 0.00 3.61
4022 6029 2.597217 TCCGCCTTTGTGCCAAGG 60.597 61.111 2.66 2.66 39.18 3.61
4026 6033 3.683937 CCTTTGTGCCAAGGCCGG 61.684 66.667 8.89 0.00 41.09 6.13
4027 6034 2.912025 CTTTGTGCCAAGGCCGGT 60.912 61.111 8.89 0.00 41.09 5.28
4028 6035 2.909965 TTTGTGCCAAGGCCGGTC 60.910 61.111 8.89 0.00 41.09 4.79
4029 6036 3.723097 TTTGTGCCAAGGCCGGTCA 62.723 57.895 9.71 0.33 41.09 4.02
4030 6037 4.947147 TGTGCCAAGGCCGGTCAC 62.947 66.667 9.71 13.51 41.09 3.67
4052 6059 4.295119 GACCCGCACACACCGAGT 62.295 66.667 0.00 0.00 0.00 4.18
4053 6060 2.913578 ACCCGCACACACCGAGTA 60.914 61.111 0.00 0.00 0.00 2.59
4054 6061 2.221906 GACCCGCACACACCGAGTAT 62.222 60.000 0.00 0.00 0.00 2.12
4055 6062 1.079405 CCCGCACACACCGAGTATT 60.079 57.895 0.00 0.00 0.00 1.89
4056 6063 1.082117 CCCGCACACACCGAGTATTC 61.082 60.000 0.00 0.00 0.00 1.75
4057 6064 0.108804 CCGCACACACCGAGTATTCT 60.109 55.000 0.00 0.00 0.00 2.40
4058 6065 1.671850 CCGCACACACCGAGTATTCTT 60.672 52.381 0.00 0.00 0.00 2.52
4059 6066 2.416296 CCGCACACACCGAGTATTCTTA 60.416 50.000 0.00 0.00 0.00 2.10
4060 6067 3.444916 CGCACACACCGAGTATTCTTAT 58.555 45.455 0.00 0.00 0.00 1.73
4061 6068 3.863424 CGCACACACCGAGTATTCTTATT 59.137 43.478 0.00 0.00 0.00 1.40
4062 6069 4.259810 CGCACACACCGAGTATTCTTATTG 60.260 45.833 0.00 0.00 0.00 1.90
4063 6070 4.630069 GCACACACCGAGTATTCTTATTGT 59.370 41.667 0.00 0.00 0.00 2.71
4064 6071 5.121768 GCACACACCGAGTATTCTTATTGTT 59.878 40.000 0.00 0.00 0.00 2.83
4065 6072 6.534059 CACACACCGAGTATTCTTATTGTTG 58.466 40.000 0.00 0.00 0.00 3.33
4066 6073 6.147164 CACACACCGAGTATTCTTATTGTTGT 59.853 38.462 0.00 0.00 0.00 3.32
4067 6074 6.367969 ACACACCGAGTATTCTTATTGTTGTC 59.632 38.462 0.00 0.00 0.00 3.18
4068 6075 5.873164 ACACCGAGTATTCTTATTGTTGTCC 59.127 40.000 0.00 0.00 0.00 4.02
4069 6076 6.106673 CACCGAGTATTCTTATTGTTGTCCT 58.893 40.000 0.00 0.00 0.00 3.85
4070 6077 6.036083 CACCGAGTATTCTTATTGTTGTCCTG 59.964 42.308 0.00 0.00 0.00 3.86
4071 6078 6.070995 ACCGAGTATTCTTATTGTTGTCCTGA 60.071 38.462 0.00 0.00 0.00 3.86
4072 6079 6.986817 CCGAGTATTCTTATTGTTGTCCTGAT 59.013 38.462 0.00 0.00 0.00 2.90
4073 6080 7.169982 CCGAGTATTCTTATTGTTGTCCTGATC 59.830 40.741 0.00 0.00 0.00 2.92
4074 6081 7.169982 CGAGTATTCTTATTGTTGTCCTGATCC 59.830 40.741 0.00 0.00 0.00 3.36
4075 6082 8.095452 AGTATTCTTATTGTTGTCCTGATCCT 57.905 34.615 0.00 0.00 0.00 3.24
4076 6083 9.213777 AGTATTCTTATTGTTGTCCTGATCCTA 57.786 33.333 0.00 0.00 0.00 2.94
4077 6084 9.482627 GTATTCTTATTGTTGTCCTGATCCTAG 57.517 37.037 0.00 0.00 0.00 3.02
4078 6085 5.918608 TCTTATTGTTGTCCTGATCCTAGC 58.081 41.667 0.00 0.00 0.00 3.42
4079 6086 3.567478 ATTGTTGTCCTGATCCTAGCC 57.433 47.619 0.00 0.00 0.00 3.93
4080 6087 1.951209 TGTTGTCCTGATCCTAGCCA 58.049 50.000 0.00 0.00 0.00 4.75
4081 6088 1.833630 TGTTGTCCTGATCCTAGCCAG 59.166 52.381 0.00 0.00 0.00 4.85
4082 6089 1.834263 GTTGTCCTGATCCTAGCCAGT 59.166 52.381 0.00 0.00 0.00 4.00
4083 6090 3.031736 GTTGTCCTGATCCTAGCCAGTA 58.968 50.000 0.00 0.00 0.00 2.74
4084 6091 3.619900 TGTCCTGATCCTAGCCAGTAT 57.380 47.619 0.00 0.00 0.00 2.12
4085 6092 3.234353 TGTCCTGATCCTAGCCAGTATG 58.766 50.000 0.00 0.00 0.00 2.39
4086 6093 3.235200 GTCCTGATCCTAGCCAGTATGT 58.765 50.000 0.00 0.00 0.00 2.29
4087 6094 3.257127 GTCCTGATCCTAGCCAGTATGTC 59.743 52.174 0.00 0.00 0.00 3.06
4088 6095 2.564947 CCTGATCCTAGCCAGTATGTCC 59.435 54.545 0.00 0.00 0.00 4.02
4089 6096 2.564947 CTGATCCTAGCCAGTATGTCCC 59.435 54.545 0.00 0.00 0.00 4.46
4090 6097 2.180086 TGATCCTAGCCAGTATGTCCCT 59.820 50.000 0.00 0.00 0.00 4.20
4091 6098 2.383442 TCCTAGCCAGTATGTCCCTC 57.617 55.000 0.00 0.00 0.00 4.30
4092 6099 1.133136 TCCTAGCCAGTATGTCCCTCC 60.133 57.143 0.00 0.00 0.00 4.30
4093 6100 1.413082 CCTAGCCAGTATGTCCCTCCA 60.413 57.143 0.00 0.00 0.00 3.86
4094 6101 2.398588 CTAGCCAGTATGTCCCTCCAA 58.601 52.381 0.00 0.00 0.00 3.53
4095 6102 1.898863 AGCCAGTATGTCCCTCCAAT 58.101 50.000 0.00 0.00 0.00 3.16
4096 6103 2.208872 AGCCAGTATGTCCCTCCAATT 58.791 47.619 0.00 0.00 0.00 2.32
4097 6104 3.393687 AGCCAGTATGTCCCTCCAATTA 58.606 45.455 0.00 0.00 0.00 1.40
4098 6105 3.136626 AGCCAGTATGTCCCTCCAATTAC 59.863 47.826 0.00 0.00 0.00 1.89
4099 6106 3.728845 CCAGTATGTCCCTCCAATTACG 58.271 50.000 0.00 0.00 0.00 3.18
4100 6107 3.386726 CCAGTATGTCCCTCCAATTACGA 59.613 47.826 0.00 0.00 0.00 3.43
4101 6108 4.141801 CCAGTATGTCCCTCCAATTACGAA 60.142 45.833 0.00 0.00 0.00 3.85
4102 6109 5.050490 CAGTATGTCCCTCCAATTACGAAG 58.950 45.833 0.00 0.00 0.00 3.79
4103 6110 3.560636 ATGTCCCTCCAATTACGAAGG 57.439 47.619 0.00 0.00 0.00 3.46
4104 6111 2.542550 TGTCCCTCCAATTACGAAGGA 58.457 47.619 0.00 0.00 0.00 3.36
4105 6112 3.112263 TGTCCCTCCAATTACGAAGGAT 58.888 45.455 0.00 0.00 0.00 3.24
4106 6113 4.291792 TGTCCCTCCAATTACGAAGGATA 58.708 43.478 0.00 0.00 0.00 2.59
4107 6114 4.344102 TGTCCCTCCAATTACGAAGGATAG 59.656 45.833 0.00 0.00 0.00 2.08
4108 6115 3.323979 TCCCTCCAATTACGAAGGATAGC 59.676 47.826 0.00 0.00 0.00 2.97
4109 6116 3.325135 CCCTCCAATTACGAAGGATAGCT 59.675 47.826 0.00 0.00 0.00 3.32
4110 6117 4.202367 CCCTCCAATTACGAAGGATAGCTT 60.202 45.833 0.00 0.00 0.00 3.74
4111 6118 5.368989 CCTCCAATTACGAAGGATAGCTTT 58.631 41.667 0.00 0.00 0.00 3.51
4112 6119 5.823045 CCTCCAATTACGAAGGATAGCTTTT 59.177 40.000 0.00 0.00 0.00 2.27
4113 6120 6.318900 CCTCCAATTACGAAGGATAGCTTTTT 59.681 38.462 0.00 0.00 0.00 1.94
4114 6121 7.083875 TCCAATTACGAAGGATAGCTTTTTG 57.916 36.000 0.00 0.00 0.00 2.44
4115 6122 6.882140 TCCAATTACGAAGGATAGCTTTTTGA 59.118 34.615 0.00 0.00 0.00 2.69
4116 6123 7.392113 TCCAATTACGAAGGATAGCTTTTTGAA 59.608 33.333 0.00 0.00 0.00 2.69
4117 6124 8.026607 CCAATTACGAAGGATAGCTTTTTGAAA 58.973 33.333 0.00 0.00 0.00 2.69
4118 6125 9.573133 CAATTACGAAGGATAGCTTTTTGAAAT 57.427 29.630 0.00 0.00 0.00 2.17
4121 6128 7.923414 ACGAAGGATAGCTTTTTGAAATACT 57.077 32.000 0.00 0.00 0.00 2.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 5.751243 AAAAATAAAGACACTGTCGCAGT 57.249 34.783 6.67 6.67 46.51 4.40
6 7 9.988350 AATATAAAAATAAAGACACTGTCGCAG 57.012 29.630 3.46 5.47 37.67 5.18
50 51 0.950116 GGATGCACATAGCCAAGAGC 59.050 55.000 0.00 0.00 44.83 4.09
51 52 2.219458 CAGGATGCACATAGCCAAGAG 58.781 52.381 0.00 0.00 44.83 2.85
52 53 1.134007 CCAGGATGCACATAGCCAAGA 60.134 52.381 0.00 0.00 44.83 3.02
53 54 1.134007 TCCAGGATGCACATAGCCAAG 60.134 52.381 0.00 0.00 44.83 3.61
54 55 0.918258 TCCAGGATGCACATAGCCAA 59.082 50.000 0.00 0.00 44.83 4.52
55 56 1.142936 ATCCAGGATGCACATAGCCA 58.857 50.000 0.00 0.00 44.83 4.75
56 57 1.531423 CATCCAGGATGCACATAGCC 58.469 55.000 16.91 0.00 44.83 3.93
65 66 2.267174 ATCGAAAGGCATCCAGGATG 57.733 50.000 23.72 23.72 42.37 3.51
66 67 3.117738 AGAAATCGAAAGGCATCCAGGAT 60.118 43.478 0.00 0.00 0.00 3.24
67 68 2.239654 AGAAATCGAAAGGCATCCAGGA 59.760 45.455 0.00 0.00 0.00 3.86
68 69 2.648059 AGAAATCGAAAGGCATCCAGG 58.352 47.619 0.00 0.00 0.00 4.45
69 70 3.441572 ACAAGAAATCGAAAGGCATCCAG 59.558 43.478 0.00 0.00 0.00 3.86
70 71 3.420893 ACAAGAAATCGAAAGGCATCCA 58.579 40.909 0.00 0.00 0.00 3.41
71 72 4.168760 CAACAAGAAATCGAAAGGCATCC 58.831 43.478 0.00 0.00 0.00 3.51
72 73 4.168760 CCAACAAGAAATCGAAAGGCATC 58.831 43.478 0.00 0.00 0.00 3.91
73 74 3.573967 ACCAACAAGAAATCGAAAGGCAT 59.426 39.130 0.00 0.00 0.00 4.40
74 75 2.955660 ACCAACAAGAAATCGAAAGGCA 59.044 40.909 0.00 0.00 0.00 4.75
75 76 3.308530 CACCAACAAGAAATCGAAAGGC 58.691 45.455 0.00 0.00 0.00 4.35
76 77 3.243367 TGCACCAACAAGAAATCGAAAGG 60.243 43.478 0.00 0.00 0.00 3.11
77 78 3.963665 TGCACCAACAAGAAATCGAAAG 58.036 40.909 0.00 0.00 0.00 2.62
78 79 3.629855 TCTGCACCAACAAGAAATCGAAA 59.370 39.130 0.00 0.00 0.00 3.46
79 80 3.210227 TCTGCACCAACAAGAAATCGAA 58.790 40.909 0.00 0.00 0.00 3.71
80 81 2.807967 CTCTGCACCAACAAGAAATCGA 59.192 45.455 0.00 0.00 0.00 3.59
81 82 2.095567 CCTCTGCACCAACAAGAAATCG 60.096 50.000 0.00 0.00 0.00 3.34
82 83 2.352127 GCCTCTGCACCAACAAGAAATC 60.352 50.000 0.00 0.00 37.47 2.17
83 84 1.615392 GCCTCTGCACCAACAAGAAAT 59.385 47.619 0.00 0.00 37.47 2.17
84 85 1.032014 GCCTCTGCACCAACAAGAAA 58.968 50.000 0.00 0.00 37.47 2.52
85 86 0.183492 AGCCTCTGCACCAACAAGAA 59.817 50.000 0.00 0.00 41.13 2.52
86 87 0.535780 CAGCCTCTGCACCAACAAGA 60.536 55.000 0.00 0.00 41.13 3.02
87 88 1.521450 CCAGCCTCTGCACCAACAAG 61.521 60.000 0.00 0.00 41.13 3.16
88 89 1.529010 CCAGCCTCTGCACCAACAA 60.529 57.895 0.00 0.00 41.13 2.83
89 90 2.113774 CCAGCCTCTGCACCAACA 59.886 61.111 0.00 0.00 41.13 3.33
90 91 2.674380 CCCAGCCTCTGCACCAAC 60.674 66.667 0.00 0.00 41.13 3.77
91 92 3.177884 ACCCAGCCTCTGCACCAA 61.178 61.111 0.00 0.00 41.13 3.67
92 93 3.957586 CACCCAGCCTCTGCACCA 61.958 66.667 0.00 0.00 41.13 4.17
93 94 2.124507 TTACACCCAGCCTCTGCACC 62.125 60.000 0.00 0.00 41.13 5.01
94 95 0.035056 ATTACACCCAGCCTCTGCAC 60.035 55.000 0.00 0.00 41.13 4.57
95 96 0.698238 AATTACACCCAGCCTCTGCA 59.302 50.000 0.00 0.00 41.13 4.41
96 97 1.098050 CAATTACACCCAGCCTCTGC 58.902 55.000 0.00 0.00 37.95 4.26
97 98 1.004745 ACCAATTACACCCAGCCTCTG 59.995 52.381 0.00 0.00 0.00 3.35
98 99 1.372501 ACCAATTACACCCAGCCTCT 58.627 50.000 0.00 0.00 0.00 3.69
99 100 3.477530 GATACCAATTACACCCAGCCTC 58.522 50.000 0.00 0.00 0.00 4.70
100 101 2.174854 GGATACCAATTACACCCAGCCT 59.825 50.000 0.00 0.00 0.00 4.58
101 102 2.174854 AGGATACCAATTACACCCAGCC 59.825 50.000 0.00 0.00 37.17 4.85
102 103 3.477530 GAGGATACCAATTACACCCAGC 58.522 50.000 0.00 0.00 37.17 4.85
103 104 3.728845 CGAGGATACCAATTACACCCAG 58.271 50.000 0.00 0.00 37.17 4.45
104 105 2.158871 GCGAGGATACCAATTACACCCA 60.159 50.000 0.00 0.00 37.17 4.51
105 106 2.490991 GCGAGGATACCAATTACACCC 58.509 52.381 0.00 0.00 37.17 4.61
106 107 2.132762 CGCGAGGATACCAATTACACC 58.867 52.381 0.00 0.00 37.17 4.16
107 108 3.088194 TCGCGAGGATACCAATTACAC 57.912 47.619 3.71 0.00 37.17 2.90
108 109 5.184287 TGATATCGCGAGGATACCAATTACA 59.816 40.000 16.66 0.00 40.34 2.41
109 110 5.647589 TGATATCGCGAGGATACCAATTAC 58.352 41.667 16.66 0.00 40.34 1.89
110 111 5.907866 TGATATCGCGAGGATACCAATTA 57.092 39.130 16.66 0.00 40.34 1.40
111 112 4.801330 TGATATCGCGAGGATACCAATT 57.199 40.909 16.66 0.00 40.34 2.32
112 113 5.344743 AATGATATCGCGAGGATACCAAT 57.655 39.130 16.66 0.00 40.34 3.16
113 114 4.801330 AATGATATCGCGAGGATACCAA 57.199 40.909 16.66 0.00 40.34 3.67
114 115 7.761038 ATATAATGATATCGCGAGGATACCA 57.239 36.000 16.66 0.00 40.34 3.25
115 116 7.755822 GGAATATAATGATATCGCGAGGATACC 59.244 40.741 16.66 0.00 40.34 2.73
116 117 8.516234 AGGAATATAATGATATCGCGAGGATAC 58.484 37.037 16.66 4.83 40.34 2.24
117 118 8.637196 AGGAATATAATGATATCGCGAGGATA 57.363 34.615 16.66 2.00 41.71 2.59
118 119 7.450014 AGAGGAATATAATGATATCGCGAGGAT 59.550 37.037 16.66 10.75 39.25 3.24
119 120 6.773200 AGAGGAATATAATGATATCGCGAGGA 59.227 38.462 16.66 5.29 0.00 3.71
120 121 6.976088 AGAGGAATATAATGATATCGCGAGG 58.024 40.000 16.66 0.00 0.00 4.63
121 122 8.864069 AAAGAGGAATATAATGATATCGCGAG 57.136 34.615 16.66 0.00 0.00 5.03
122 123 9.653287 AAAAAGAGGAATATAATGATATCGCGA 57.347 29.630 13.09 13.09 0.00 5.87
152 153 0.038618 GAAAGCCCCGACGCATTTTT 60.039 50.000 0.00 0.00 0.00 1.94
153 154 1.584495 GAAAGCCCCGACGCATTTT 59.416 52.632 0.00 0.00 0.00 1.82
154 155 2.340328 GGAAAGCCCCGACGCATTT 61.340 57.895 0.00 0.00 0.00 2.32
155 156 2.750237 GGAAAGCCCCGACGCATT 60.750 61.111 0.00 0.00 0.00 3.56
163 164 0.393808 TGCTACAATCGGAAAGCCCC 60.394 55.000 0.00 0.00 33.99 5.80
164 165 1.334869 CATGCTACAATCGGAAAGCCC 59.665 52.381 0.00 0.00 33.99 5.19
165 166 2.017049 ACATGCTACAATCGGAAAGCC 58.983 47.619 0.00 0.00 33.99 4.35
166 167 3.764885 AACATGCTACAATCGGAAAGC 57.235 42.857 0.00 0.00 35.51 3.51
167 168 5.295431 TGAAACATGCTACAATCGGAAAG 57.705 39.130 0.00 0.00 0.00 2.62
168 169 4.155826 CCTGAAACATGCTACAATCGGAAA 59.844 41.667 0.00 0.00 0.00 3.13
169 170 3.689161 CCTGAAACATGCTACAATCGGAA 59.311 43.478 0.00 0.00 0.00 4.30
170 171 3.055458 TCCTGAAACATGCTACAATCGGA 60.055 43.478 0.00 0.00 0.00 4.55
171 172 3.270027 TCCTGAAACATGCTACAATCGG 58.730 45.455 0.00 0.00 0.00 4.18
172 173 5.490139 AATCCTGAAACATGCTACAATCG 57.510 39.130 0.00 0.00 0.00 3.34
173 174 8.213518 TCTTAATCCTGAAACATGCTACAATC 57.786 34.615 0.00 0.00 0.00 2.67
174 175 8.757982 ATCTTAATCCTGAAACATGCTACAAT 57.242 30.769 0.00 0.00 0.00 2.71
175 176 9.109393 GTATCTTAATCCTGAAACATGCTACAA 57.891 33.333 0.00 0.00 0.00 2.41
176 177 8.264347 TGTATCTTAATCCTGAAACATGCTACA 58.736 33.333 0.00 0.00 0.00 2.74
177 178 8.662781 TGTATCTTAATCCTGAAACATGCTAC 57.337 34.615 0.00 0.00 0.00 3.58
178 179 9.330063 CTTGTATCTTAATCCTGAAACATGCTA 57.670 33.333 0.00 0.00 0.00 3.49
179 180 7.284034 CCTTGTATCTTAATCCTGAAACATGCT 59.716 37.037 0.00 0.00 0.00 3.79
180 181 7.283127 TCCTTGTATCTTAATCCTGAAACATGC 59.717 37.037 0.00 0.00 0.00 4.06
181 182 8.737168 TCCTTGTATCTTAATCCTGAAACATG 57.263 34.615 0.00 0.00 0.00 3.21
182 183 9.927081 ATTCCTTGTATCTTAATCCTGAAACAT 57.073 29.630 0.00 0.00 0.00 2.71
183 184 9.753674 AATTCCTTGTATCTTAATCCTGAAACA 57.246 29.630 0.00 0.00 0.00 2.83
185 186 9.973661 TCAATTCCTTGTATCTTAATCCTGAAA 57.026 29.630 0.00 0.00 33.87 2.69
186 187 9.618890 CTCAATTCCTTGTATCTTAATCCTGAA 57.381 33.333 0.00 0.00 33.87 3.02
187 188 8.992349 TCTCAATTCCTTGTATCTTAATCCTGA 58.008 33.333 0.00 0.00 33.87 3.86
188 189 9.270640 CTCTCAATTCCTTGTATCTTAATCCTG 57.729 37.037 0.00 0.00 33.87 3.86
189 190 8.997734 ACTCTCAATTCCTTGTATCTTAATCCT 58.002 33.333 0.00 0.00 33.87 3.24
190 191 9.050601 CACTCTCAATTCCTTGTATCTTAATCC 57.949 37.037 0.00 0.00 33.87 3.01
191 192 8.555361 GCACTCTCAATTCCTTGTATCTTAATC 58.445 37.037 0.00 0.00 33.87 1.75
192 193 7.500559 GGCACTCTCAATTCCTTGTATCTTAAT 59.499 37.037 0.00 0.00 33.87 1.40
193 194 6.823689 GGCACTCTCAATTCCTTGTATCTTAA 59.176 38.462 0.00 0.00 33.87 1.85
194 195 6.349300 GGCACTCTCAATTCCTTGTATCTTA 58.651 40.000 0.00 0.00 33.87 2.10
195 196 5.189180 GGCACTCTCAATTCCTTGTATCTT 58.811 41.667 0.00 0.00 33.87 2.40
196 197 4.384647 GGGCACTCTCAATTCCTTGTATCT 60.385 45.833 0.00 0.00 33.87 1.98
197 198 3.879892 GGGCACTCTCAATTCCTTGTATC 59.120 47.826 0.00 0.00 33.87 2.24
198 199 3.525199 AGGGCACTCTCAATTCCTTGTAT 59.475 43.478 0.00 0.00 33.87 2.29
199 200 2.912956 AGGGCACTCTCAATTCCTTGTA 59.087 45.455 0.00 0.00 33.87 2.41
200 201 1.707427 AGGGCACTCTCAATTCCTTGT 59.293 47.619 0.00 0.00 33.87 3.16
201 202 2.503895 AGGGCACTCTCAATTCCTTG 57.496 50.000 0.00 0.00 0.00 3.61
202 203 4.657814 TTTAGGGCACTCTCAATTCCTT 57.342 40.909 0.00 0.00 0.00 3.36
203 204 4.657814 TTTTAGGGCACTCTCAATTCCT 57.342 40.909 0.00 0.00 0.00 3.36
204 205 5.921962 ATTTTTAGGGCACTCTCAATTCC 57.078 39.130 0.00 0.00 0.00 3.01
212 213 5.985530 GCATTCCAATATTTTTAGGGCACTC 59.014 40.000 0.00 0.00 0.00 3.51
325 326 7.174426 TGAGTCAATACGAATAGATACCGTGAT 59.826 37.037 0.00 0.00 37.69 3.06
420 423 3.384789 TCAAGTCCATATCTTCTGTCCCG 59.615 47.826 0.00 0.00 0.00 5.14
434 440 4.564782 ATGCTTCAGAAGATCAAGTCCA 57.435 40.909 14.86 0.00 0.00 4.02
486 492 5.294356 CAACTAAGTGCCCATACGCTAATA 58.706 41.667 0.00 0.00 0.00 0.98
487 493 4.127171 CAACTAAGTGCCCATACGCTAAT 58.873 43.478 0.00 0.00 0.00 1.73
489 495 2.740580 GCAACTAAGTGCCCATACGCTA 60.741 50.000 0.00 0.00 38.66 4.26
490 496 2.012051 GCAACTAAGTGCCCATACGCT 61.012 52.381 0.00 0.00 38.66 5.07
517 523 4.693095 CAGAAGCTTCTAGGGAACAAACTC 59.307 45.833 28.02 0.00 35.34 3.01
522 528 4.593206 TCTTTCAGAAGCTTCTAGGGAACA 59.407 41.667 28.02 13.34 35.34 3.18
523 529 5.153950 TCTTTCAGAAGCTTCTAGGGAAC 57.846 43.478 28.02 0.00 35.34 3.62
527 533 4.199432 TGCTCTTTCAGAAGCTTCTAGG 57.801 45.455 28.02 17.08 35.34 3.02
538 544 4.943705 TGCTACCCTATTTTGCTCTTTCAG 59.056 41.667 0.00 0.00 0.00 3.02
539 545 4.917385 TGCTACCCTATTTTGCTCTTTCA 58.083 39.130 0.00 0.00 0.00 2.69
562 570 8.402798 TCACGATAATATAATGCCCAACAATT 57.597 30.769 0.00 0.00 0.00 2.32
584 592 2.680913 GCCACACACCGCTCATCAC 61.681 63.158 0.00 0.00 0.00 3.06
588 596 2.591429 CAAGCCACACACCGCTCA 60.591 61.111 0.00 0.00 33.09 4.26
589 597 3.357079 CCAAGCCACACACCGCTC 61.357 66.667 0.00 0.00 33.09 5.03
590 598 4.189580 ACCAAGCCACACACCGCT 62.190 61.111 0.00 0.00 36.74 5.52
592 600 1.785041 CTTGACCAAGCCACACACCG 61.785 60.000 0.00 0.00 0.00 4.94
593 601 1.455383 CCTTGACCAAGCCACACACC 61.455 60.000 4.31 0.00 37.11 4.16
594 602 0.465460 TCCTTGACCAAGCCACACAC 60.465 55.000 4.31 0.00 37.11 3.82
750 763 1.142097 GGAAGACTAGGCAGGACGC 59.858 63.158 0.00 0.00 41.28 5.19
752 765 0.896226 AACGGAAGACTAGGCAGGAC 59.104 55.000 0.00 0.00 0.00 3.85
791 804 4.734917 TCGAACGCAAAAAGGAAAAGAAA 58.265 34.783 0.00 0.00 0.00 2.52
792 805 4.347813 CTCGAACGCAAAAAGGAAAAGAA 58.652 39.130 0.00 0.00 0.00 2.52
793 806 3.790789 GCTCGAACGCAAAAAGGAAAAGA 60.791 43.478 0.00 0.00 0.00 2.52
794 807 2.467673 GCTCGAACGCAAAAAGGAAAAG 59.532 45.455 0.00 0.00 0.00 2.27
795 808 2.098443 AGCTCGAACGCAAAAAGGAAAA 59.902 40.909 0.00 0.00 0.00 2.29
796 809 1.673920 AGCTCGAACGCAAAAAGGAAA 59.326 42.857 0.00 0.00 0.00 3.13
797 810 1.002900 CAGCTCGAACGCAAAAAGGAA 60.003 47.619 0.00 0.00 0.00 3.36
798 811 0.586319 CAGCTCGAACGCAAAAAGGA 59.414 50.000 0.00 0.00 0.00 3.36
822 836 8.482429 GTTGCTAATTGTTTCAATCTTTGACTG 58.518 33.333 0.00 0.00 39.87 3.51
965 993 7.348201 CAGTGTGTATGTCACTTCTTCTTTTC 58.652 38.462 0.00 0.00 46.27 2.29
1049 1086 6.070767 TGTGGTAAAATGAACTTGGGAAAACA 60.071 34.615 0.00 0.00 0.00 2.83
1152 1198 8.737175 CACCCTACATACGTATACATCATTAGT 58.263 37.037 7.96 1.37 0.00 2.24
1166 1212 1.343465 GGACCATCCACCCTACATACG 59.657 57.143 0.00 0.00 36.28 3.06
1283 1381 5.438761 ACAACATCCTTTAGTTGCAAGAC 57.561 39.130 0.00 0.00 46.79 3.01
1356 2290 0.531974 TGTTCTCGATAATGCCGCCC 60.532 55.000 0.00 0.00 0.00 6.13
1612 2592 3.392285 TGGAGCCATATATGAGCAACAGT 59.608 43.478 21.03 6.72 0.00 3.55
1618 2598 2.995283 TGCATGGAGCCATATATGAGC 58.005 47.619 14.54 14.66 44.83 4.26
1621 2601 3.020984 TGCATGCATGGAGCCATATATG 58.979 45.455 27.34 5.68 44.83 1.78
1849 2861 2.882927 AAGTTTCCCTTTTTGGCGTC 57.117 45.000 0.00 0.00 0.00 5.19
1868 2880 3.874543 CGGCCTGTACATGCAAACTTATA 59.125 43.478 22.26 0.00 0.00 0.98
1869 2881 2.682856 CGGCCTGTACATGCAAACTTAT 59.317 45.455 22.26 0.00 0.00 1.73
2355 3376 1.152989 GAGCTGATCCGCTTCTGCAG 61.153 60.000 13.24 7.63 41.08 4.41
3133 4166 3.678072 GCTGTGTATTGTGTATGTGTCGT 59.322 43.478 0.00 0.00 0.00 4.34
3239 4275 4.104738 TCCCCATCAAAGAGGTAATCATCC 59.895 45.833 0.00 0.00 0.00 3.51
3242 4278 4.370776 TCTCCCCATCAAAGAGGTAATCA 58.629 43.478 0.00 0.00 0.00 2.57
3244 4280 4.540099 TGTTCTCCCCATCAAAGAGGTAAT 59.460 41.667 0.00 0.00 0.00 1.89
3268 4304 0.370273 CACGCAACGGCTCATCTAAC 59.630 55.000 0.00 0.00 38.10 2.34
3269 4305 0.739462 CCACGCAACGGCTCATCTAA 60.739 55.000 0.00 0.00 38.10 2.10
3287 4323 0.912486 AGTGGGTCTCTATGCCAACC 59.088 55.000 0.00 0.00 28.88 3.77
3288 4324 2.014068 GCAGTGGGTCTCTATGCCAAC 61.014 57.143 0.00 0.00 0.00 3.77
3301 4337 1.447317 AACTTTCGTGCTGCAGTGGG 61.447 55.000 16.64 4.63 0.00 4.61
3337 4373 5.820423 TGTTGCTTAACTTCTTAGTTGCAGA 59.180 36.000 0.00 0.00 44.22 4.26
3366 4402 2.493278 ACATTTGTTAGACATGCTGCCC 59.507 45.455 0.00 0.00 0.00 5.36
3392 4428 8.766492 AATGTCCTTAGGGGGTGATTTATATA 57.234 34.615 0.00 0.00 35.33 0.86
3403 4439 2.711009 TCATGCTAATGTCCTTAGGGGG 59.289 50.000 0.00 0.00 37.82 5.40
3474 5481 9.716507 GCTTATATTTTAGCTTTGATTCGTTCA 57.283 29.630 0.00 0.00 34.57 3.18
3479 5486 9.816354 TTTGGGCTTATATTTTAGCTTTGATTC 57.184 29.630 0.00 0.00 37.54 2.52
3487 5494 7.148804 GCGCTATTTTTGGGCTTATATTTTAGC 60.149 37.037 0.00 0.00 39.74 3.09
3502 5509 6.686679 TCATAGATTGTTTCGCGCTATTTTTG 59.313 34.615 5.56 0.00 0.00 2.44
3545 5552 6.214191 TCAGTTGCAGGTAATTCACAAAAA 57.786 33.333 0.00 0.00 0.00 1.94
3559 5566 7.905126 TGTAATACGAACATATTCAGTTGCAG 58.095 34.615 0.00 0.00 34.14 4.41
3572 5579 6.255453 GGCCGTTAGTAAATGTAATACGAACA 59.745 38.462 9.30 0.00 38.19 3.18
3577 5584 5.748152 TGTCGGCCGTTAGTAAATGTAATAC 59.252 40.000 27.15 10.31 0.00 1.89
3593 5600 3.186047 GGTCATCGTTGTCGGCCG 61.186 66.667 22.12 22.12 37.69 6.13
3609 5616 7.265673 TCTGATAGAGAAAACATAGGAAACGG 58.734 38.462 0.00 0.00 0.00 4.44
3633 5640 4.525912 AGAAAGACATGGGCAACAATTC 57.474 40.909 0.00 0.00 39.74 2.17
3644 5651 2.549754 ACTCACGCCAAAGAAAGACATG 59.450 45.455 0.00 0.00 0.00 3.21
3653 5660 0.038526 ACGGAGTACTCACGCCAAAG 60.039 55.000 23.91 7.13 44.34 2.77
3751 5758 7.822334 CCACTATTAGAGAATTACACCACAACA 59.178 37.037 0.00 0.00 0.00 3.33
3767 5774 5.239963 TCGATGTTCGCATACCACTATTAGA 59.760 40.000 0.00 0.00 40.21 2.10
3773 5780 2.890808 ATCGATGTTCGCATACCACT 57.109 45.000 0.00 0.00 40.21 4.00
3782 5789 7.113658 GTGAAGTTATCTGAAATCGATGTTCG 58.886 38.462 0.00 3.06 42.10 3.95
3783 5790 7.402640 GGTGAAGTTATCTGAAATCGATGTTC 58.597 38.462 0.00 6.06 0.00 3.18
3784 5791 6.036083 CGGTGAAGTTATCTGAAATCGATGTT 59.964 38.462 0.00 0.00 0.00 2.71
3785 5792 5.520288 CGGTGAAGTTATCTGAAATCGATGT 59.480 40.000 0.00 0.00 0.00 3.06
3786 5793 5.050769 CCGGTGAAGTTATCTGAAATCGATG 60.051 44.000 0.00 0.00 0.00 3.84
3787 5794 5.050490 CCGGTGAAGTTATCTGAAATCGAT 58.950 41.667 0.00 0.00 0.00 3.59
3788 5795 4.081862 ACCGGTGAAGTTATCTGAAATCGA 60.082 41.667 6.12 0.00 0.00 3.59
3789 5796 4.032900 CACCGGTGAAGTTATCTGAAATCG 59.967 45.833 31.31 0.00 0.00 3.34
3790 5797 4.332819 CCACCGGTGAAGTTATCTGAAATC 59.667 45.833 36.07 0.00 0.00 2.17
3791 5798 4.261801 CCACCGGTGAAGTTATCTGAAAT 58.738 43.478 36.07 0.00 0.00 2.17
3792 5799 3.558321 CCCACCGGTGAAGTTATCTGAAA 60.558 47.826 36.07 0.00 0.00 2.69
3793 5800 2.027561 CCCACCGGTGAAGTTATCTGAA 60.028 50.000 36.07 0.00 0.00 3.02
3794 5801 1.553248 CCCACCGGTGAAGTTATCTGA 59.447 52.381 36.07 0.00 0.00 3.27
3795 5802 1.278127 ACCCACCGGTGAAGTTATCTG 59.722 52.381 36.07 15.06 42.48 2.90
3796 5803 1.652947 ACCCACCGGTGAAGTTATCT 58.347 50.000 36.07 7.44 42.48 1.98
3809 5816 4.906537 ACCCGTTTGGCACCCACC 62.907 66.667 0.00 0.00 37.83 4.61
3810 5817 3.601685 CACCCGTTTGGCACCCAC 61.602 66.667 0.00 0.00 37.83 4.61
3811 5818 4.904590 CCACCCGTTTGGCACCCA 62.905 66.667 0.00 0.00 37.83 4.51
3823 5830 1.970352 TAAATACGTCCGGGCCACCC 61.970 60.000 4.39 0.00 41.09 4.61
3824 5831 0.107268 ATAAATACGTCCGGGCCACC 59.893 55.000 4.39 0.00 0.00 4.61
3825 5832 1.600485 CAATAAATACGTCCGGGCCAC 59.400 52.381 4.39 0.00 0.00 5.01
3826 5833 1.485480 TCAATAAATACGTCCGGGCCA 59.515 47.619 4.39 0.00 0.00 5.36
3827 5834 2.140717 CTCAATAAATACGTCCGGGCC 58.859 52.381 0.00 0.00 0.00 5.80
3828 5835 1.529865 GCTCAATAAATACGTCCGGGC 59.470 52.381 0.00 0.00 0.00 6.13
3829 5836 2.140717 GGCTCAATAAATACGTCCGGG 58.859 52.381 0.00 0.00 0.00 5.73
3830 5837 2.140717 GGGCTCAATAAATACGTCCGG 58.859 52.381 0.00 0.00 0.00 5.14
3831 5838 1.790623 CGGGCTCAATAAATACGTCCG 59.209 52.381 0.00 0.00 0.00 4.79
3832 5839 2.140717 CCGGGCTCAATAAATACGTCC 58.859 52.381 0.00 0.00 0.00 4.79
3833 5840 2.830104 ACCGGGCTCAATAAATACGTC 58.170 47.619 6.32 0.00 0.00 4.34
3834 5841 2.940410 CAACCGGGCTCAATAAATACGT 59.060 45.455 6.32 0.00 0.00 3.57
3835 5842 2.289547 CCAACCGGGCTCAATAAATACG 59.710 50.000 6.32 0.00 0.00 3.06
3836 5843 3.982576 CCAACCGGGCTCAATAAATAC 57.017 47.619 6.32 0.00 0.00 1.89
3866 5873 4.778415 TCTCTGAAGACGGCGCGC 62.778 66.667 25.94 25.94 0.00 6.86
3867 5874 2.876645 GTCTCTGAAGACGGCGCG 60.877 66.667 6.90 0.00 42.42 6.86
3874 5881 0.322975 GCTTGCCCAGTCTCTGAAGA 59.677 55.000 0.00 0.00 32.44 2.87
3875 5882 0.676151 GGCTTGCCCAGTCTCTGAAG 60.676 60.000 0.00 0.00 32.44 3.02
3876 5883 1.376466 GGCTTGCCCAGTCTCTGAA 59.624 57.895 0.00 0.00 32.44 3.02
3877 5884 1.842920 TGGCTTGCCCAGTCTCTGA 60.843 57.895 9.35 0.00 39.18 3.27
3878 5885 2.752358 TGGCTTGCCCAGTCTCTG 59.248 61.111 9.35 0.00 39.18 3.35
3885 5892 0.251742 AATGCTAACTGGCTTGCCCA 60.252 50.000 9.35 0.00 42.79 5.36
3886 5893 0.897621 AAATGCTAACTGGCTTGCCC 59.102 50.000 9.35 0.00 0.00 5.36
3887 5894 1.468054 CGAAATGCTAACTGGCTTGCC 60.468 52.381 4.43 4.43 0.00 4.52
3888 5895 1.900237 CGAAATGCTAACTGGCTTGC 58.100 50.000 0.00 0.00 0.00 4.01
3889 5896 1.468054 GGCGAAATGCTAACTGGCTTG 60.468 52.381 0.00 0.00 45.43 4.01
3890 5897 0.811281 GGCGAAATGCTAACTGGCTT 59.189 50.000 0.00 0.00 45.43 4.35
3891 5898 0.322456 TGGCGAAATGCTAACTGGCT 60.322 50.000 0.00 0.00 45.43 4.75
3892 5899 0.740737 ATGGCGAAATGCTAACTGGC 59.259 50.000 0.00 0.00 45.43 4.85
3893 5900 1.334869 GGATGGCGAAATGCTAACTGG 59.665 52.381 0.00 0.00 45.43 4.00
3894 5901 2.016318 TGGATGGCGAAATGCTAACTG 58.984 47.619 0.00 0.00 45.43 3.16
3895 5902 2.418368 TGGATGGCGAAATGCTAACT 57.582 45.000 0.00 0.00 45.43 2.24
3896 5903 3.715628 AATGGATGGCGAAATGCTAAC 57.284 42.857 0.00 0.00 45.43 2.34
3897 5904 6.403866 AAATAATGGATGGCGAAATGCTAA 57.596 33.333 0.00 0.00 45.43 3.09
3898 5905 6.403866 AAAATAATGGATGGCGAAATGCTA 57.596 33.333 0.00 0.00 45.43 3.49
3899 5906 4.942761 AAATAATGGATGGCGAAATGCT 57.057 36.364 0.00 0.00 45.43 3.79
3900 5907 5.116983 CGTAAAATAATGGATGGCGAAATGC 59.883 40.000 0.00 0.00 45.38 3.56
3901 5908 6.434596 TCGTAAAATAATGGATGGCGAAATG 58.565 36.000 0.00 0.00 0.00 2.32
3902 5909 6.627395 TCGTAAAATAATGGATGGCGAAAT 57.373 33.333 0.00 0.00 0.00 2.17
3903 5910 6.627395 ATCGTAAAATAATGGATGGCGAAA 57.373 33.333 0.00 0.00 0.00 3.46
3904 5911 6.434596 CAATCGTAAAATAATGGATGGCGAA 58.565 36.000 0.00 0.00 0.00 4.70
3905 5912 5.561919 GCAATCGTAAAATAATGGATGGCGA 60.562 40.000 0.00 0.00 0.00 5.54
3906 5913 4.616802 GCAATCGTAAAATAATGGATGGCG 59.383 41.667 0.00 0.00 0.00 5.69
3907 5914 5.772521 AGCAATCGTAAAATAATGGATGGC 58.227 37.500 0.00 0.00 34.89 4.40
3908 5915 7.651808 AGAAGCAATCGTAAAATAATGGATGG 58.348 34.615 0.00 0.00 0.00 3.51
3916 5923 9.805966 CGCATAAATAGAAGCAATCGTAAAATA 57.194 29.630 0.00 0.00 0.00 1.40
3917 5924 8.556194 TCGCATAAATAGAAGCAATCGTAAAAT 58.444 29.630 0.00 0.00 0.00 1.82
3918 5925 7.911343 TCGCATAAATAGAAGCAATCGTAAAA 58.089 30.769 0.00 0.00 0.00 1.52
3919 5926 7.436970 TCTCGCATAAATAGAAGCAATCGTAAA 59.563 33.333 0.00 0.00 0.00 2.01
3920 5927 6.921307 TCTCGCATAAATAGAAGCAATCGTAA 59.079 34.615 0.00 0.00 0.00 3.18
3921 5928 6.362551 GTCTCGCATAAATAGAAGCAATCGTA 59.637 38.462 0.00 0.00 0.00 3.43
3922 5929 5.175856 GTCTCGCATAAATAGAAGCAATCGT 59.824 40.000 0.00 0.00 0.00 3.73
3923 5930 5.175673 TGTCTCGCATAAATAGAAGCAATCG 59.824 40.000 0.00 0.00 0.00 3.34
3924 5931 6.530913 TGTCTCGCATAAATAGAAGCAATC 57.469 37.500 0.00 0.00 0.00 2.67
3925 5932 6.925610 TTGTCTCGCATAAATAGAAGCAAT 57.074 33.333 0.00 0.00 0.00 3.56
3926 5933 6.735678 TTTGTCTCGCATAAATAGAAGCAA 57.264 33.333 0.00 0.00 0.00 3.91
3927 5934 6.735678 TTTTGTCTCGCATAAATAGAAGCA 57.264 33.333 0.00 0.00 0.00 3.91
3928 5935 6.688813 CCTTTTTGTCTCGCATAAATAGAAGC 59.311 38.462 0.00 0.00 29.98 3.86
3929 5936 7.752695 ACCTTTTTGTCTCGCATAAATAGAAG 58.247 34.615 0.00 0.00 29.98 2.85
3930 5937 7.681939 ACCTTTTTGTCTCGCATAAATAGAA 57.318 32.000 0.00 0.00 29.98 2.10
3931 5938 8.662141 GTTACCTTTTTGTCTCGCATAAATAGA 58.338 33.333 0.00 0.00 29.98 1.98
3932 5939 7.908601 GGTTACCTTTTTGTCTCGCATAAATAG 59.091 37.037 0.00 0.00 29.98 1.73
3933 5940 7.390996 TGGTTACCTTTTTGTCTCGCATAAATA 59.609 33.333 2.07 0.00 29.98 1.40
3934 5941 6.207810 TGGTTACCTTTTTGTCTCGCATAAAT 59.792 34.615 2.07 0.00 29.98 1.40
3935 5942 5.531659 TGGTTACCTTTTTGTCTCGCATAAA 59.468 36.000 2.07 0.00 0.00 1.40
3936 5943 5.064558 TGGTTACCTTTTTGTCTCGCATAA 58.935 37.500 2.07 0.00 0.00 1.90
3937 5944 4.643463 TGGTTACCTTTTTGTCTCGCATA 58.357 39.130 2.07 0.00 0.00 3.14
3938 5945 3.482436 TGGTTACCTTTTTGTCTCGCAT 58.518 40.909 2.07 0.00 0.00 4.73
3939 5946 2.920524 TGGTTACCTTTTTGTCTCGCA 58.079 42.857 2.07 0.00 0.00 5.10
3940 5947 3.065648 TGTTGGTTACCTTTTTGTCTCGC 59.934 43.478 2.07 0.00 0.00 5.03
3941 5948 4.886247 TGTTGGTTACCTTTTTGTCTCG 57.114 40.909 2.07 0.00 0.00 4.04
3942 5949 7.506328 ACTATGTTGGTTACCTTTTTGTCTC 57.494 36.000 2.07 0.00 0.00 3.36
3943 5950 7.558444 TGAACTATGTTGGTTACCTTTTTGTCT 59.442 33.333 2.07 0.00 0.00 3.41
3944 5951 7.646526 GTGAACTATGTTGGTTACCTTTTTGTC 59.353 37.037 2.07 0.00 0.00 3.18
3945 5952 7.417003 GGTGAACTATGTTGGTTACCTTTTTGT 60.417 37.037 2.07 0.00 0.00 2.83
3946 5953 6.921307 GGTGAACTATGTTGGTTACCTTTTTG 59.079 38.462 2.07 0.00 0.00 2.44
3947 5954 6.837048 AGGTGAACTATGTTGGTTACCTTTTT 59.163 34.615 2.07 0.00 32.39 1.94
3948 5955 6.370453 AGGTGAACTATGTTGGTTACCTTTT 58.630 36.000 2.07 0.00 32.39 2.27
3949 5956 5.948842 AGGTGAACTATGTTGGTTACCTTT 58.051 37.500 2.07 0.00 32.39 3.11
3950 5957 5.578157 AGGTGAACTATGTTGGTTACCTT 57.422 39.130 2.07 0.00 32.39 3.50
3951 5958 5.046087 GGTAGGTGAACTATGTTGGTTACCT 60.046 44.000 2.07 0.00 36.14 3.08
3952 5959 5.046087 AGGTAGGTGAACTATGTTGGTTACC 60.046 44.000 0.00 0.00 33.43 2.85
3953 5960 6.046290 AGGTAGGTGAACTATGTTGGTTAC 57.954 41.667 0.00 0.00 33.43 2.50
3954 5961 6.691255 AAGGTAGGTGAACTATGTTGGTTA 57.309 37.500 0.00 0.00 33.43 2.85
3955 5962 5.578157 AAGGTAGGTGAACTATGTTGGTT 57.422 39.130 0.00 0.00 33.43 3.67
3956 5963 5.557866 GAAAGGTAGGTGAACTATGTTGGT 58.442 41.667 0.00 0.00 33.43 3.67
3957 5964 4.630069 CGAAAGGTAGGTGAACTATGTTGG 59.370 45.833 0.00 0.00 33.43 3.77
3958 5965 5.475719 TCGAAAGGTAGGTGAACTATGTTG 58.524 41.667 0.00 0.00 33.43 3.33
3959 5966 5.733620 TCGAAAGGTAGGTGAACTATGTT 57.266 39.130 0.00 0.00 33.43 2.71
3960 5967 5.479375 TCTTCGAAAGGTAGGTGAACTATGT 59.521 40.000 0.00 0.00 33.43 2.29
3961 5968 5.962433 TCTTCGAAAGGTAGGTGAACTATG 58.038 41.667 0.00 0.00 33.43 2.23
3962 5969 6.574350 CATCTTCGAAAGGTAGGTGAACTAT 58.426 40.000 0.00 0.00 33.43 2.12
3963 5970 5.623824 GCATCTTCGAAAGGTAGGTGAACTA 60.624 44.000 0.00 0.00 0.00 2.24
3964 5971 4.822026 CATCTTCGAAAGGTAGGTGAACT 58.178 43.478 0.00 0.00 0.00 3.01
3965 5972 3.371285 GCATCTTCGAAAGGTAGGTGAAC 59.629 47.826 0.00 0.00 0.00 3.18
3966 5973 3.007506 TGCATCTTCGAAAGGTAGGTGAA 59.992 43.478 0.00 0.00 0.00 3.18
3967 5974 2.565391 TGCATCTTCGAAAGGTAGGTGA 59.435 45.455 0.00 0.00 0.00 4.02
3968 5975 2.972625 TGCATCTTCGAAAGGTAGGTG 58.027 47.619 0.00 0.00 0.00 4.00
3969 5976 3.452627 AGATGCATCTTCGAAAGGTAGGT 59.547 43.478 23.75 0.00 31.97 3.08
3970 5977 4.065321 AGATGCATCTTCGAAAGGTAGG 57.935 45.455 23.75 0.00 31.97 3.18
3971 5978 4.677378 CGTAGATGCATCTTCGAAAGGTAG 59.323 45.833 37.61 15.29 46.33 3.18
3972 5979 4.607955 CGTAGATGCATCTTCGAAAGGTA 58.392 43.478 37.61 16.12 46.33 3.08
3973 5980 3.448686 CGTAGATGCATCTTCGAAAGGT 58.551 45.455 37.61 15.37 46.33 3.50
3979 5986 6.755461 ATTAACTTCGTAGATGCATCTTCG 57.245 37.500 36.01 36.01 45.29 3.79
3980 5987 8.804688 AGTATTAACTTCGTAGATGCATCTTC 57.195 34.615 32.94 26.09 33.43 2.87
3981 5988 7.868415 GGAGTATTAACTTCGTAGATGCATCTT 59.132 37.037 32.94 16.32 35.72 2.40
3982 5989 7.371936 GGAGTATTAACTTCGTAGATGCATCT 58.628 38.462 30.85 30.85 37.19 2.90
3983 5990 7.569677 GGAGTATTAACTTCGTAGATGCATC 57.430 40.000 19.37 19.37 35.56 3.91
3994 6001 4.436986 GCACAAAGGCGGAGTATTAACTTC 60.437 45.833 0.00 0.00 35.56 3.01
3995 6002 3.439129 GCACAAAGGCGGAGTATTAACTT 59.561 43.478 0.00 0.00 35.56 2.66
3996 6003 3.007635 GCACAAAGGCGGAGTATTAACT 58.992 45.455 0.00 0.00 39.21 2.24
3997 6004 2.096980 GGCACAAAGGCGGAGTATTAAC 59.903 50.000 0.00 0.00 33.57 2.01
3998 6005 2.361789 GGCACAAAGGCGGAGTATTAA 58.638 47.619 0.00 0.00 33.57 1.40
3999 6006 2.032680 GGCACAAAGGCGGAGTATTA 57.967 50.000 0.00 0.00 33.57 0.98
4000 6007 2.868253 GGCACAAAGGCGGAGTATT 58.132 52.632 0.00 0.00 33.57 1.89
4001 6008 4.637771 GGCACAAAGGCGGAGTAT 57.362 55.556 0.00 0.00 33.57 2.12
4013 6020 4.947147 GTGACCGGCCTTGGCACA 62.947 66.667 20.06 7.87 36.60 4.57
4035 6042 2.221906 ATACTCGGTGTGTGCGGGTC 62.222 60.000 0.00 0.00 0.00 4.46
4036 6043 1.823169 AATACTCGGTGTGTGCGGGT 61.823 55.000 0.00 0.00 0.00 5.28
4037 6044 1.079405 AATACTCGGTGTGTGCGGG 60.079 57.895 0.00 0.00 0.00 6.13
4038 6045 0.108804 AGAATACTCGGTGTGTGCGG 60.109 55.000 0.00 0.00 0.00 5.69
4039 6046 1.710013 AAGAATACTCGGTGTGTGCG 58.290 50.000 0.00 0.00 0.00 5.34
4040 6047 4.630069 ACAATAAGAATACTCGGTGTGTGC 59.370 41.667 0.00 0.00 0.00 4.57
4041 6048 6.147164 ACAACAATAAGAATACTCGGTGTGTG 59.853 38.462 0.00 0.00 0.00 3.82
4042 6049 6.228258 ACAACAATAAGAATACTCGGTGTGT 58.772 36.000 0.00 0.00 0.00 3.72
4043 6050 6.183360 GGACAACAATAAGAATACTCGGTGTG 60.183 42.308 0.00 0.00 0.00 3.82
4044 6051 5.873164 GGACAACAATAAGAATACTCGGTGT 59.127 40.000 0.00 0.00 0.00 4.16
4045 6052 6.036083 CAGGACAACAATAAGAATACTCGGTG 59.964 42.308 0.00 0.00 0.00 4.94
4046 6053 6.070995 TCAGGACAACAATAAGAATACTCGGT 60.071 38.462 0.00 0.00 0.00 4.69
4047 6054 6.338146 TCAGGACAACAATAAGAATACTCGG 58.662 40.000 0.00 0.00 0.00 4.63
4048 6055 7.169982 GGATCAGGACAACAATAAGAATACTCG 59.830 40.741 0.00 0.00 0.00 4.18
4049 6056 8.207545 AGGATCAGGACAACAATAAGAATACTC 58.792 37.037 0.00 0.00 0.00 2.59
4050 6057 8.095452 AGGATCAGGACAACAATAAGAATACT 57.905 34.615 0.00 0.00 0.00 2.12
4051 6058 9.482627 CTAGGATCAGGACAACAATAAGAATAC 57.517 37.037 0.00 0.00 0.00 1.89
4052 6059 8.150945 GCTAGGATCAGGACAACAATAAGAATA 58.849 37.037 0.00 0.00 0.00 1.75
4053 6060 6.995091 GCTAGGATCAGGACAACAATAAGAAT 59.005 38.462 0.00 0.00 0.00 2.40
4054 6061 6.349300 GCTAGGATCAGGACAACAATAAGAA 58.651 40.000 0.00 0.00 0.00 2.52
4055 6062 5.163301 GGCTAGGATCAGGACAACAATAAGA 60.163 44.000 0.00 0.00 0.00 2.10
4056 6063 5.059833 GGCTAGGATCAGGACAACAATAAG 58.940 45.833 0.00 0.00 0.00 1.73
4057 6064 4.473196 TGGCTAGGATCAGGACAACAATAA 59.527 41.667 0.00 0.00 0.00 1.40
4058 6065 4.037222 TGGCTAGGATCAGGACAACAATA 58.963 43.478 0.00 0.00 0.00 1.90
4059 6066 2.846206 TGGCTAGGATCAGGACAACAAT 59.154 45.455 0.00 0.00 0.00 2.71
4060 6067 2.237143 CTGGCTAGGATCAGGACAACAA 59.763 50.000 0.00 0.00 0.00 2.83
4061 6068 1.833630 CTGGCTAGGATCAGGACAACA 59.166 52.381 0.00 0.00 0.00 3.33
4062 6069 1.834263 ACTGGCTAGGATCAGGACAAC 59.166 52.381 0.85 0.00 35.47 3.32
4063 6070 2.254152 ACTGGCTAGGATCAGGACAA 57.746 50.000 0.85 0.00 35.47 3.18
4064 6071 3.234353 CATACTGGCTAGGATCAGGACA 58.766 50.000 0.85 0.00 35.47 4.02
4065 6072 3.235200 ACATACTGGCTAGGATCAGGAC 58.765 50.000 0.85 0.00 35.47 3.85
4066 6073 3.501349 GACATACTGGCTAGGATCAGGA 58.499 50.000 0.85 0.00 35.47 3.86
4067 6074 2.564947 GGACATACTGGCTAGGATCAGG 59.435 54.545 0.85 0.00 35.47 3.86
4068 6075 2.564947 GGGACATACTGGCTAGGATCAG 59.435 54.545 0.85 0.00 37.07 2.90
4069 6076 2.180086 AGGGACATACTGGCTAGGATCA 59.820 50.000 0.85 0.00 0.00 2.92
4070 6077 2.829120 GAGGGACATACTGGCTAGGATC 59.171 54.545 0.85 0.00 0.00 3.36
4071 6078 2.493687 GGAGGGACATACTGGCTAGGAT 60.494 54.545 0.85 0.00 0.00 3.24
4072 6079 1.133136 GGAGGGACATACTGGCTAGGA 60.133 57.143 0.85 0.00 0.00 2.94
4073 6080 1.343069 GGAGGGACATACTGGCTAGG 58.657 60.000 0.85 0.00 0.00 3.02
4074 6081 2.088104 TGGAGGGACATACTGGCTAG 57.912 55.000 0.00 0.00 0.00 3.42
4075 6082 2.561209 TTGGAGGGACATACTGGCTA 57.439 50.000 0.00 0.00 0.00 3.93
4076 6083 1.898863 ATTGGAGGGACATACTGGCT 58.101 50.000 0.00 0.00 0.00 4.75
4077 6084 2.736670 AATTGGAGGGACATACTGGC 57.263 50.000 0.00 0.00 0.00 4.85
4078 6085 3.386726 TCGTAATTGGAGGGACATACTGG 59.613 47.826 0.00 0.00 0.00 4.00
4079 6086 4.665833 TCGTAATTGGAGGGACATACTG 57.334 45.455 0.00 0.00 0.00 2.74
4080 6087 4.101119 CCTTCGTAATTGGAGGGACATACT 59.899 45.833 4.14 0.00 32.72 2.12
4081 6088 4.100498 TCCTTCGTAATTGGAGGGACATAC 59.900 45.833 7.75 0.00 35.05 2.39
4082 6089 4.291792 TCCTTCGTAATTGGAGGGACATA 58.708 43.478 7.75 0.00 35.05 2.29
4083 6090 3.112263 TCCTTCGTAATTGGAGGGACAT 58.888 45.455 7.75 0.00 35.05 3.06
4084 6091 2.542550 TCCTTCGTAATTGGAGGGACA 58.457 47.619 7.75 0.00 35.05 4.02
4085 6092 3.840124 ATCCTTCGTAATTGGAGGGAC 57.160 47.619 12.41 0.00 41.73 4.46
4086 6093 3.323979 GCTATCCTTCGTAATTGGAGGGA 59.676 47.826 12.50 12.50 42.90 4.20
4087 6094 3.325135 AGCTATCCTTCGTAATTGGAGGG 59.675 47.826 3.86 3.86 32.95 4.30
4088 6095 4.608948 AGCTATCCTTCGTAATTGGAGG 57.391 45.455 0.00 0.00 32.95 4.30
4089 6096 6.927294 AAAAGCTATCCTTCGTAATTGGAG 57.073 37.500 0.00 0.00 32.95 3.86
4090 6097 6.882140 TCAAAAAGCTATCCTTCGTAATTGGA 59.118 34.615 0.00 0.00 31.99 3.53
4091 6098 7.083875 TCAAAAAGCTATCCTTCGTAATTGG 57.916 36.000 0.00 0.00 31.99 3.16
4092 6099 8.964420 TTTCAAAAAGCTATCCTTCGTAATTG 57.036 30.769 0.00 0.00 31.99 2.32
4095 6102 9.444600 AGTATTTCAAAAAGCTATCCTTCGTAA 57.555 29.630 0.00 0.00 31.99 3.18
4097 6104 7.923414 AGTATTTCAAAAAGCTATCCTTCGT 57.077 32.000 0.00 0.00 31.99 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.