Multiple sequence alignment - TraesCS1D01G106700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G106700 chr1D 100.000 2451 0 0 1 2451 99547901 99545451 0.000000e+00 4527.0
1 TraesCS1D01G106700 chr1D 100.000 609 0 0 2737 3345 99545165 99544557 0.000000e+00 1125.0
2 TraesCS1D01G106700 chr1D 80.841 428 57 14 2876 3285 40808049 40808469 2.510000e-81 313.0
3 TraesCS1D01G106700 chr1D 82.576 264 44 2 2877 3140 11227346 11227085 7.220000e-57 231.0
4 TraesCS1D01G106700 chr1D 87.059 85 9 2 2755 2837 203459139 203459055 9.880000e-16 95.3
5 TraesCS1D01G106700 chr1B 91.553 1681 76 23 569 2202 152836848 152838509 0.000000e+00 2257.0
6 TraesCS1D01G106700 chr1A 90.024 1674 95 34 569 2205 95049891 95048253 0.000000e+00 2100.0
7 TraesCS1D01G106700 chr1A 90.024 1674 95 34 569 2205 95527589 95529227 0.000000e+00 2100.0
8 TraesCS1D01G106700 chr1A 86.126 382 34 7 2771 3151 95530453 95530816 8.700000e-106 394.0
9 TraesCS1D01G106700 chr1A 85.864 382 35 6 2771 3151 95047070 95046707 4.050000e-104 388.0
10 TraesCS1D01G106700 chr1A 80.000 425 66 15 2876 3285 40125515 40125935 2.520000e-76 296.0
11 TraesCS1D01G106700 chr1A 77.932 503 71 24 2799 3285 336543904 336543426 9.140000e-71 278.0
12 TraesCS1D01G106700 chr1A 89.831 177 15 1 2029 2205 95531720 95531893 1.210000e-54 224.0
13 TraesCS1D01G106700 chr1A 88.636 88 9 1 2748 2834 257984619 257984532 4.560000e-19 106.0
14 TraesCS1D01G106700 chr5A 85.744 484 52 7 2811 3279 556690349 556690830 2.320000e-136 496.0
15 TraesCS1D01G106700 chr5B 85.078 449 50 10 2810 3243 293243515 293243961 3.060000e-120 442.0
16 TraesCS1D01G106700 chr5B 82.524 515 71 14 2738 3245 515581917 515581415 5.130000e-118 435.0
17 TraesCS1D01G106700 chr7A 83.817 482 59 11 2811 3277 550049764 550049287 1.100000e-119 440.0
18 TraesCS1D01G106700 chr7A 90.094 212 21 0 361 572 195317512 195317301 3.290000e-70 276.0
19 TraesCS1D01G106700 chr6D 85.714 427 46 10 2872 3285 147893402 147892978 1.430000e-118 436.0
20 TraesCS1D01G106700 chr6D 80.851 564 86 14 2739 3285 346270899 346270341 1.110000e-114 424.0
21 TraesCS1D01G106700 chr6D 80.522 498 58 14 2810 3291 343137147 343136673 2.470000e-91 346.0
22 TraesCS1D01G106700 chr6D 80.964 415 53 15 2877 3269 138417292 138417702 4.190000e-79 305.0
23 TraesCS1D01G106700 chr6D 84.420 276 40 3 2877 3151 382036164 382035891 5.500000e-68 268.0
24 TraesCS1D01G106700 chr6D 97.987 149 3 0 217 365 459701850 459701998 3.310000e-65 259.0
25 TraesCS1D01G106700 chr6D 78.220 427 67 13 2877 3285 263487973 263487555 1.990000e-62 250.0
26 TraesCS1D01G106700 chr6D 83.212 274 44 2 2878 3151 372885051 372885322 1.990000e-62 250.0
27 TraesCS1D01G106700 chr6D 95.484 155 6 1 210 363 440963448 440963294 2.580000e-61 246.0
28 TraesCS1D01G106700 chr6D 77.483 453 61 17 2790 3206 380995127 380994680 2.010000e-57 233.0
29 TraesCS1D01G106700 chr6D 87.500 136 16 1 2799 2934 471549818 471549684 4.470000e-34 156.0
30 TraesCS1D01G106700 chr6D 93.333 60 4 0 2789 2848 258392833 258392892 4.600000e-14 89.8
31 TraesCS1D01G106700 chr3B 83.000 500 64 12 2799 3285 425371495 425371004 1.840000e-117 433.0
32 TraesCS1D01G106700 chr3B 95.172 145 7 0 216 360 765923672 765923816 2.600000e-56 230.0
33 TraesCS1D01G106700 chr3B 94.483 145 8 0 216 360 335132183 335132327 1.210000e-54 224.0
34 TraesCS1D01G106700 chr7D 81.323 514 67 14 2784 3279 134107421 134107923 1.130000e-104 390.0
35 TraesCS1D01G106700 chr7D 98.649 148 2 0 215 362 618707131 618707278 2.560000e-66 263.0
36 TraesCS1D01G106700 chr2D 84.673 398 45 6 2889 3271 360269609 360270005 1.880000e-102 383.0
37 TraesCS1D01G106700 chr2D 81.314 487 72 13 2799 3269 333980115 333980598 8.760000e-101 377.0
38 TraesCS1D01G106700 chr2D 94.313 211 11 1 360 570 73522248 73522039 4.160000e-84 322.0
39 TraesCS1D01G106700 chr2D 91.480 223 17 1 1 221 73522467 73522245 4.190000e-79 305.0
40 TraesCS1D01G106700 chr2D 99.301 143 1 0 221 363 120092429 120092571 3.310000e-65 259.0
41 TraesCS1D01G106700 chr2D 80.488 287 31 18 2799 3084 471395820 471395558 2.630000e-46 196.0
42 TraesCS1D01G106700 chr2D 85.816 141 20 0 3155 3295 471395295 471395155 2.080000e-32 150.0
43 TraesCS1D01G106700 chr2A 80.825 485 74 11 2810 3285 765917365 765917839 2.450000e-96 363.0
44 TraesCS1D01G106700 chr4D 80.119 503 58 19 2799 3285 450534664 450534188 1.490000e-88 337.0
45 TraesCS1D01G106700 chr4D 87.059 255 28 5 2876 3129 107729008 107729258 1.960000e-72 283.0
46 TraesCS1D01G106700 chr4D 76.303 422 62 18 2876 3285 480506406 480506801 1.220000e-44 191.0
47 TraesCS1D01G106700 chr4D 88.073 109 12 1 2876 2984 107728802 107728909 9.740000e-26 128.0
48 TraesCS1D01G106700 chr4A 80.202 495 59 21 2799 3277 572310173 572310644 5.350000e-88 335.0
49 TraesCS1D01G106700 chr4A 79.102 512 80 18 2799 3293 654703052 654702551 8.950000e-86 327.0
50 TraesCS1D01G106700 chr4A 84.290 331 44 7 2799 3128 654889461 654889138 1.940000e-82 316.0
51 TraesCS1D01G106700 chr4A 95.172 145 7 0 218 362 462224016 462223872 2.600000e-56 230.0
52 TraesCS1D01G106700 chr7B 79.596 495 74 19 2810 3285 379495806 379495320 2.490000e-86 329.0
53 TraesCS1D01G106700 chr7B 95.172 145 7 0 216 360 247261586 247261442 2.600000e-56 230.0
54 TraesCS1D01G106700 chr5D 80.460 435 57 16 2876 3291 291903118 291902693 1.170000e-79 307.0
55 TraesCS1D01G106700 chr4B 91.441 222 17 1 2 221 388799044 388798823 1.510000e-78 303.0
56 TraesCS1D01G106700 chr4B 94.180 189 11 0 360 548 388798826 388798638 4.220000e-74 289.0
57 TraesCS1D01G106700 chr4B 84.420 276 40 3 2877 3151 491098131 491097858 5.500000e-68 268.0
58 TraesCS1D01G106700 chr3D 80.235 425 65 10 2876 3285 174436705 174436285 5.420000e-78 302.0
59 TraesCS1D01G106700 chr3D 91.549 213 17 1 360 571 424595490 424595278 3.260000e-75 292.0
60 TraesCS1D01G106700 chr3D 79.350 431 63 16 2876 3285 571004484 571004059 2.540000e-71 279.0
61 TraesCS1D01G106700 chr3D 93.793 145 9 0 218 362 18361852 18361996 5.620000e-53 219.0
62 TraesCS1D01G106700 chr3D 91.667 60 4 1 2789 2848 142096649 142096591 7.690000e-12 82.4
63 TraesCS1D01G106700 chrUn 90.141 213 20 1 360 571 175809556 175809768 3.290000e-70 276.0
64 TraesCS1D01G106700 chrUn 88.789 223 23 1 1 221 42703744 42703522 4.250000e-69 272.0
65 TraesCS1D01G106700 chrUn 88.789 223 23 1 1 221 175809337 175809559 4.250000e-69 272.0
66 TraesCS1D01G106700 chrUn 89.671 213 21 1 360 571 42703525 42703313 1.530000e-68 270.0
67 TraesCS1D01G106700 chrUn 89.623 212 22 0 360 571 42722596 42722385 1.530000e-68 270.0
68 TraesCS1D01G106700 chrUn 89.623 212 22 0 360 571 42772645 42772434 1.530000e-68 270.0
69 TraesCS1D01G106700 chrUn 89.623 212 22 0 360 571 175749364 175749575 1.530000e-68 270.0
70 TraesCS1D01G106700 chrUn 88.341 223 24 1 1 221 42772864 42772642 1.980000e-67 267.0
71 TraesCS1D01G106700 chrUn 88.341 223 24 1 1 221 175749145 175749367 1.980000e-67 267.0
72 TraesCS1D01G106700 chrUn 88.341 223 24 1 1 221 272605426 272605648 1.980000e-67 267.0
73 TraesCS1D01G106700 chrUn 88.341 223 24 1 1 221 393956538 393956760 1.980000e-67 267.0
74 TraesCS1D01G106700 chrUn 87.892 223 25 1 1 221 42722815 42722593 9.210000e-66 261.0
75 TraesCS1D01G106700 chrUn 87.273 55 4 3 2788 2841 320198915 320198863 3.600000e-05 60.2
76 TraesCS1D01G106700 chr6A 81.132 265 27 15 3041 3285 483595856 483595595 1.220000e-44 191.0
77 TraesCS1D01G106700 chr2B 88.889 90 7 1 3151 3237 428620747 428620836 1.270000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G106700 chr1D 99544557 99547901 3344 True 2826 4527 100.000000 1 3345 2 chr1D.!!$R3 3344
1 TraesCS1D01G106700 chr1B 152836848 152838509 1661 False 2257 2257 91.553000 569 2202 1 chr1B.!!$F1 1633
2 TraesCS1D01G106700 chr1A 95046707 95049891 3184 True 1244 2100 87.944000 569 3151 2 chr1A.!!$R3 2582
3 TraesCS1D01G106700 chr1A 95527589 95531893 4304 False 906 2100 88.660333 569 3151 3 chr1A.!!$F2 2582
4 TraesCS1D01G106700 chr5B 515581415 515581917 502 True 435 435 82.524000 2738 3245 1 chr5B.!!$R1 507
5 TraesCS1D01G106700 chr6D 346270341 346270899 558 True 424 424 80.851000 2739 3285 1 chr6D.!!$R4 546
6 TraesCS1D01G106700 chr7D 134107421 134107923 502 False 390 390 81.323000 2784 3279 1 chr7D.!!$F1 495
7 TraesCS1D01G106700 chr4A 654702551 654703052 501 True 327 327 79.102000 2799 3293 1 chr4A.!!$R2 494

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
164 165 0.036294 TCTCGAAGCGGTCTCTCTCA 60.036 55.0 0.00 0.00 0.00 3.27 F
242 243 0.036388 TGTGTTCGGGAATCCTCTGC 60.036 55.0 0.00 0.00 0.00 4.26 F
298 299 0.096281 TTCGCCGCTCGCTAAAATTG 59.904 50.0 0.00 0.00 38.27 2.32 F
354 355 0.108615 AGCAGAGTGATTCCGAACGG 60.109 55.0 6.94 6.94 0.00 4.44 F
876 897 0.323087 TCGACTTGATCCGGTCTCCA 60.323 55.0 0.00 0.00 0.00 3.86 F
1681 1708 0.596083 CGCGCTCCAAGAGATCGATT 60.596 55.0 5.56 0.00 31.41 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1681 1708 0.456221 GATCTCTGTTTCTCCGCGGA 59.544 55.000 29.03 29.03 0.00 5.54 R
2222 2277 0.179040 TTCGAAAAGCCCGACTTGGT 60.179 50.000 0.00 0.00 39.09 3.67 R
2223 2278 0.517316 CTTCGAAAAGCCCGACTTGG 59.483 55.000 0.00 0.00 39.09 3.61 R
2227 2307 1.206831 GCACTTCGAAAAGCCCGAC 59.793 57.895 9.65 0.00 35.81 4.79 R
2229 2309 1.586154 ATGGCACTTCGAAAAGCCCG 61.586 55.000 27.90 7.94 46.45 6.13 R
3245 4613 0.109272 GAGTGCGACGATCAAGTGGA 60.109 55.000 0.00 0.00 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.977086 TGATCATCTGGGGGCTACT 57.023 52.632 0.00 0.00 0.00 2.57
20 21 3.344535 TGATCATCTGGGGGCTACTAA 57.655 47.619 0.00 0.00 0.00 2.24
21 22 2.972713 TGATCATCTGGGGGCTACTAAC 59.027 50.000 0.00 0.00 0.00 2.34
22 23 2.868964 TCATCTGGGGGCTACTAACT 57.131 50.000 0.00 0.00 0.00 2.24
23 24 3.130734 TCATCTGGGGGCTACTAACTT 57.869 47.619 0.00 0.00 0.00 2.66
24 25 3.460825 TCATCTGGGGGCTACTAACTTT 58.539 45.455 0.00 0.00 0.00 2.66
25 26 3.850173 TCATCTGGGGGCTACTAACTTTT 59.150 43.478 0.00 0.00 0.00 2.27
26 27 3.994931 TCTGGGGGCTACTAACTTTTC 57.005 47.619 0.00 0.00 0.00 2.29
27 28 2.235402 TCTGGGGGCTACTAACTTTTCG 59.765 50.000 0.00 0.00 0.00 3.46
28 29 1.279846 TGGGGGCTACTAACTTTTCGG 59.720 52.381 0.00 0.00 0.00 4.30
29 30 1.376543 GGGGCTACTAACTTTTCGGC 58.623 55.000 0.00 0.00 0.00 5.54
30 31 1.339342 GGGGCTACTAACTTTTCGGCA 60.339 52.381 0.00 0.00 0.00 5.69
31 32 2.640184 GGGCTACTAACTTTTCGGCAT 58.360 47.619 0.00 0.00 0.00 4.40
32 33 2.354821 GGGCTACTAACTTTTCGGCATG 59.645 50.000 0.00 0.00 0.00 4.06
33 34 2.223272 GGCTACTAACTTTTCGGCATGC 60.223 50.000 9.90 9.90 0.00 4.06
34 35 2.418628 GCTACTAACTTTTCGGCATGCA 59.581 45.455 21.36 0.00 0.00 3.96
35 36 3.485877 GCTACTAACTTTTCGGCATGCAG 60.486 47.826 21.36 16.69 0.00 4.41
36 37 1.812571 ACTAACTTTTCGGCATGCAGG 59.187 47.619 21.36 10.96 0.00 4.85
37 38 1.133025 CTAACTTTTCGGCATGCAGGG 59.867 52.381 21.36 8.19 0.00 4.45
38 39 2.158561 AACTTTTCGGCATGCAGGGC 62.159 55.000 21.36 15.76 0.00 5.19
39 40 2.283101 TTTTCGGCATGCAGGGCT 60.283 55.556 22.91 0.00 0.00 5.19
40 41 1.880819 CTTTTCGGCATGCAGGGCTT 61.881 55.000 22.91 0.00 0.00 4.35
41 42 1.470996 TTTTCGGCATGCAGGGCTTT 61.471 50.000 22.91 0.00 0.00 3.51
42 43 2.157305 TTTCGGCATGCAGGGCTTTG 62.157 55.000 22.91 7.65 0.00 2.77
43 44 3.376078 CGGCATGCAGGGCTTTGT 61.376 61.111 22.91 0.00 0.00 2.83
44 45 2.045708 CGGCATGCAGGGCTTTGTA 61.046 57.895 22.91 0.00 0.00 2.41
45 46 1.386525 CGGCATGCAGGGCTTTGTAT 61.387 55.000 22.91 0.00 0.00 2.29
46 47 0.826062 GGCATGCAGGGCTTTGTATT 59.174 50.000 21.36 0.00 0.00 1.89
47 48 1.202452 GGCATGCAGGGCTTTGTATTC 60.202 52.381 21.36 0.00 0.00 1.75
48 49 1.534595 GCATGCAGGGCTTTGTATTCG 60.535 52.381 14.21 0.00 0.00 3.34
49 50 1.745087 CATGCAGGGCTTTGTATTCGT 59.255 47.619 0.00 0.00 0.00 3.85
50 51 1.164411 TGCAGGGCTTTGTATTCGTG 58.836 50.000 0.00 0.00 0.00 4.35
51 52 0.179163 GCAGGGCTTTGTATTCGTGC 60.179 55.000 0.00 0.00 34.66 5.34
52 53 1.164411 CAGGGCTTTGTATTCGTGCA 58.836 50.000 0.00 0.00 0.00 4.57
53 54 1.131126 CAGGGCTTTGTATTCGTGCAG 59.869 52.381 0.00 0.00 0.00 4.41
54 55 1.003118 AGGGCTTTGTATTCGTGCAGA 59.997 47.619 0.00 0.00 0.00 4.26
55 56 1.398390 GGGCTTTGTATTCGTGCAGAG 59.602 52.381 0.00 0.00 0.00 3.35
56 57 2.346803 GGCTTTGTATTCGTGCAGAGA 58.653 47.619 0.00 0.00 0.00 3.10
57 58 2.094417 GGCTTTGTATTCGTGCAGAGAC 59.906 50.000 0.00 0.00 0.00 3.36
58 59 2.094417 GCTTTGTATTCGTGCAGAGACC 59.906 50.000 0.00 0.00 0.00 3.85
59 60 2.380084 TTGTATTCGTGCAGAGACCC 57.620 50.000 0.00 0.00 0.00 4.46
60 61 0.535335 TGTATTCGTGCAGAGACCCC 59.465 55.000 0.00 0.00 0.00 4.95
61 62 0.179081 GTATTCGTGCAGAGACCCCC 60.179 60.000 0.00 0.00 0.00 5.40
62 63 0.325296 TATTCGTGCAGAGACCCCCT 60.325 55.000 0.00 0.00 0.00 4.79
63 64 1.201429 ATTCGTGCAGAGACCCCCTT 61.201 55.000 0.00 0.00 0.00 3.95
64 65 2.046892 CGTGCAGAGACCCCCTTG 60.047 66.667 0.00 0.00 0.00 3.61
65 66 2.583441 CGTGCAGAGACCCCCTTGA 61.583 63.158 0.00 0.00 0.00 3.02
66 67 1.298014 GTGCAGAGACCCCCTTGAG 59.702 63.158 0.00 0.00 0.00 3.02
67 68 1.920325 TGCAGAGACCCCCTTGAGG 60.920 63.158 0.00 0.00 0.00 3.86
68 69 2.993853 CAGAGACCCCCTTGAGGC 59.006 66.667 0.00 0.00 0.00 4.70
69 70 2.685380 AGAGACCCCCTTGAGGCG 60.685 66.667 0.00 0.00 0.00 5.52
70 71 3.787001 GAGACCCCCTTGAGGCGG 61.787 72.222 0.00 0.00 33.37 6.13
71 72 4.332543 AGACCCCCTTGAGGCGGA 62.333 66.667 7.72 0.00 31.97 5.54
72 73 3.787001 GACCCCCTTGAGGCGGAG 61.787 72.222 7.72 1.17 31.97 4.63
90 91 3.975992 GCTTTGTGCGTGTATGGAG 57.024 52.632 0.00 0.00 0.00 3.86
91 92 0.447801 GCTTTGTGCGTGTATGGAGG 59.552 55.000 0.00 0.00 0.00 4.30
92 93 1.086696 CTTTGTGCGTGTATGGAGGG 58.913 55.000 0.00 0.00 0.00 4.30
93 94 0.398696 TTTGTGCGTGTATGGAGGGT 59.601 50.000 0.00 0.00 0.00 4.34
94 95 0.036765 TTGTGCGTGTATGGAGGGTC 60.037 55.000 0.00 0.00 0.00 4.46
95 96 0.902984 TGTGCGTGTATGGAGGGTCT 60.903 55.000 0.00 0.00 0.00 3.85
96 97 0.249398 GTGCGTGTATGGAGGGTCTT 59.751 55.000 0.00 0.00 0.00 3.01
97 98 0.981183 TGCGTGTATGGAGGGTCTTT 59.019 50.000 0.00 0.00 0.00 2.52
98 99 1.066430 TGCGTGTATGGAGGGTCTTTC 60.066 52.381 0.00 0.00 0.00 2.62
99 100 1.742750 GCGTGTATGGAGGGTCTTTCC 60.743 57.143 0.00 0.00 35.20 3.13
108 109 4.500265 GGTCTTTCCCTTGCTGCA 57.500 55.556 0.00 0.00 0.00 4.41
109 110 2.261215 GGTCTTTCCCTTGCTGCAG 58.739 57.895 10.11 10.11 0.00 4.41
110 111 1.583477 GTCTTTCCCTTGCTGCAGC 59.417 57.895 31.89 31.89 42.50 5.25
111 112 1.968017 TCTTTCCCTTGCTGCAGCG 60.968 57.895 32.11 19.44 45.83 5.18
112 113 1.968017 CTTTCCCTTGCTGCAGCGA 60.968 57.895 32.11 29.49 45.83 4.93
113 114 1.518056 CTTTCCCTTGCTGCAGCGAA 61.518 55.000 32.11 24.93 45.83 4.70
114 115 1.518056 TTTCCCTTGCTGCAGCGAAG 61.518 55.000 32.11 30.20 45.83 3.79
115 116 2.670934 CCCTTGCTGCAGCGAAGT 60.671 61.111 32.11 0.00 45.83 3.01
116 117 2.559840 CCTTGCTGCAGCGAAGTG 59.440 61.111 32.11 22.31 45.83 3.16
117 118 1.962822 CCTTGCTGCAGCGAAGTGA 60.963 57.895 32.11 12.29 45.83 3.41
118 119 1.509644 CCTTGCTGCAGCGAAGTGAA 61.510 55.000 32.11 18.94 45.83 3.18
119 120 0.385223 CTTGCTGCAGCGAAGTGAAC 60.385 55.000 32.11 4.71 45.83 3.18
120 121 0.815213 TTGCTGCAGCGAAGTGAACT 60.815 50.000 32.11 0.00 45.83 3.01
121 122 1.206072 GCTGCAGCGAAGTGAACTG 59.794 57.895 25.23 0.00 34.48 3.16
124 125 4.047834 CAGCGAAGTGAACTGCCA 57.952 55.556 0.00 0.00 0.00 4.92
125 126 2.320215 CAGCGAAGTGAACTGCCAA 58.680 52.632 0.00 0.00 0.00 4.52
126 127 0.877071 CAGCGAAGTGAACTGCCAAT 59.123 50.000 0.00 0.00 0.00 3.16
127 128 1.267806 CAGCGAAGTGAACTGCCAATT 59.732 47.619 0.00 0.00 0.00 2.32
128 129 1.267806 AGCGAAGTGAACTGCCAATTG 59.732 47.619 0.00 0.00 0.00 2.32
129 130 1.689959 CGAAGTGAACTGCCAATTGC 58.310 50.000 0.00 0.00 41.77 3.56
130 131 1.267806 CGAAGTGAACTGCCAATTGCT 59.732 47.619 0.00 0.00 42.00 3.91
131 132 2.287788 CGAAGTGAACTGCCAATTGCTT 60.288 45.455 0.00 0.00 42.00 3.91
132 133 3.721035 GAAGTGAACTGCCAATTGCTTT 58.279 40.909 0.00 0.00 42.00 3.51
133 134 3.102052 AGTGAACTGCCAATTGCTTTG 57.898 42.857 0.00 0.00 42.00 2.77
145 146 5.143376 CAATTGCTTTGGAGTTGGATTCT 57.857 39.130 0.00 0.00 0.00 2.40
146 147 5.166398 CAATTGCTTTGGAGTTGGATTCTC 58.834 41.667 0.00 0.00 0.00 2.87
147 148 3.795688 TGCTTTGGAGTTGGATTCTCT 57.204 42.857 0.00 0.00 33.06 3.10
148 149 3.679389 TGCTTTGGAGTTGGATTCTCTC 58.321 45.455 0.00 0.00 33.06 3.20
149 150 2.675348 GCTTTGGAGTTGGATTCTCTCG 59.325 50.000 0.00 0.00 33.06 4.04
150 151 3.617531 GCTTTGGAGTTGGATTCTCTCGA 60.618 47.826 0.00 0.00 33.06 4.04
151 152 4.569943 CTTTGGAGTTGGATTCTCTCGAA 58.430 43.478 0.00 0.00 33.06 3.71
152 153 3.876274 TGGAGTTGGATTCTCTCGAAG 57.124 47.619 0.00 0.00 31.60 3.79
153 154 2.093973 TGGAGTTGGATTCTCTCGAAGC 60.094 50.000 0.00 0.00 34.88 3.86
154 155 2.189342 GAGTTGGATTCTCTCGAAGCG 58.811 52.381 0.00 0.00 36.43 4.68
155 156 1.134965 AGTTGGATTCTCTCGAAGCGG 60.135 52.381 0.00 0.00 36.43 5.52
156 157 0.895530 TTGGATTCTCTCGAAGCGGT 59.104 50.000 0.00 0.00 36.43 5.68
157 158 0.456221 TGGATTCTCTCGAAGCGGTC 59.544 55.000 0.00 0.00 36.43 4.79
158 159 0.741915 GGATTCTCTCGAAGCGGTCT 59.258 55.000 0.00 0.00 36.43 3.85
159 160 1.268845 GGATTCTCTCGAAGCGGTCTC 60.269 57.143 0.00 0.00 36.43 3.36
160 161 1.673920 GATTCTCTCGAAGCGGTCTCT 59.326 52.381 0.00 0.00 31.60 3.10
161 162 1.088306 TTCTCTCGAAGCGGTCTCTC 58.912 55.000 0.00 0.00 0.00 3.20
162 163 0.250793 TCTCTCGAAGCGGTCTCTCT 59.749 55.000 0.00 0.00 0.00 3.10
163 164 0.655733 CTCTCGAAGCGGTCTCTCTC 59.344 60.000 0.00 0.00 0.00 3.20
164 165 0.036294 TCTCGAAGCGGTCTCTCTCA 60.036 55.000 0.00 0.00 0.00 3.27
165 166 1.021202 CTCGAAGCGGTCTCTCTCAT 58.979 55.000 0.00 0.00 0.00 2.90
166 167 2.158943 TCTCGAAGCGGTCTCTCTCATA 60.159 50.000 0.00 0.00 0.00 2.15
167 168 2.811431 CTCGAAGCGGTCTCTCTCATAT 59.189 50.000 0.00 0.00 0.00 1.78
168 169 2.809119 TCGAAGCGGTCTCTCTCATATC 59.191 50.000 0.00 0.00 0.00 1.63
169 170 2.550180 CGAAGCGGTCTCTCTCATATCA 59.450 50.000 0.00 0.00 0.00 2.15
170 171 3.003793 CGAAGCGGTCTCTCTCATATCAA 59.996 47.826 0.00 0.00 0.00 2.57
171 172 4.545610 GAAGCGGTCTCTCTCATATCAAG 58.454 47.826 0.00 0.00 0.00 3.02
172 173 2.295909 AGCGGTCTCTCTCATATCAAGC 59.704 50.000 0.00 0.00 0.00 4.01
173 174 2.295909 GCGGTCTCTCTCATATCAAGCT 59.704 50.000 0.00 0.00 0.00 3.74
174 175 3.611530 GCGGTCTCTCTCATATCAAGCTC 60.612 52.174 0.00 0.00 0.00 4.09
175 176 3.364864 CGGTCTCTCTCATATCAAGCTCG 60.365 52.174 0.00 0.00 0.00 5.03
176 177 3.057596 GGTCTCTCTCATATCAAGCTCGG 60.058 52.174 0.00 0.00 0.00 4.63
177 178 3.818210 GTCTCTCTCATATCAAGCTCGGA 59.182 47.826 0.00 0.00 0.00 4.55
178 179 3.818210 TCTCTCTCATATCAAGCTCGGAC 59.182 47.826 0.00 0.00 0.00 4.79
179 180 3.555966 TCTCTCATATCAAGCTCGGACA 58.444 45.455 0.00 0.00 0.00 4.02
180 181 3.316588 TCTCTCATATCAAGCTCGGACAC 59.683 47.826 0.00 0.00 0.00 3.67
181 182 3.291584 TCTCATATCAAGCTCGGACACT 58.708 45.455 0.00 0.00 0.00 3.55
182 183 3.067320 TCTCATATCAAGCTCGGACACTG 59.933 47.826 0.00 0.00 0.00 3.66
183 184 3.023832 TCATATCAAGCTCGGACACTGA 58.976 45.455 0.00 0.00 0.00 3.41
184 185 3.638627 TCATATCAAGCTCGGACACTGAT 59.361 43.478 0.00 0.00 0.00 2.90
185 186 2.593346 ATCAAGCTCGGACACTGATC 57.407 50.000 0.00 0.00 0.00 2.92
186 187 0.171231 TCAAGCTCGGACACTGATCG 59.829 55.000 0.00 0.00 0.00 3.69
187 188 0.109086 CAAGCTCGGACACTGATCGT 60.109 55.000 0.00 0.00 0.00 3.73
188 189 0.603569 AAGCTCGGACACTGATCGTT 59.396 50.000 0.00 0.00 0.00 3.85
189 190 0.171455 AGCTCGGACACTGATCGTTC 59.829 55.000 0.00 0.00 0.00 3.95
190 191 0.171455 GCTCGGACACTGATCGTTCT 59.829 55.000 0.00 0.00 0.00 3.01
191 192 1.901538 CTCGGACACTGATCGTTCTG 58.098 55.000 0.00 0.00 0.00 3.02
192 193 1.200252 CTCGGACACTGATCGTTCTGT 59.800 52.381 0.60 0.60 34.68 3.41
193 194 1.611977 TCGGACACTGATCGTTCTGTT 59.388 47.619 3.52 0.00 32.29 3.16
194 195 2.035449 TCGGACACTGATCGTTCTGTTT 59.965 45.455 3.52 0.00 32.29 2.83
195 196 3.253921 TCGGACACTGATCGTTCTGTTTA 59.746 43.478 3.52 0.00 32.29 2.01
196 197 3.364023 CGGACACTGATCGTTCTGTTTAC 59.636 47.826 3.52 0.00 32.29 2.01
197 198 4.557205 GGACACTGATCGTTCTGTTTACT 58.443 43.478 3.52 0.00 32.29 2.24
198 199 4.621886 GGACACTGATCGTTCTGTTTACTC 59.378 45.833 3.52 0.00 32.29 2.59
199 200 5.455056 ACACTGATCGTTCTGTTTACTCT 57.545 39.130 3.52 0.00 32.29 3.24
200 201 5.844004 ACACTGATCGTTCTGTTTACTCTT 58.156 37.500 3.52 0.00 32.29 2.85
201 202 5.921408 ACACTGATCGTTCTGTTTACTCTTC 59.079 40.000 3.52 0.00 32.29 2.87
202 203 5.920840 CACTGATCGTTCTGTTTACTCTTCA 59.079 40.000 3.52 0.00 32.29 3.02
203 204 5.921408 ACTGATCGTTCTGTTTACTCTTCAC 59.079 40.000 0.60 0.00 30.62 3.18
204 205 6.085555 TGATCGTTCTGTTTACTCTTCACT 57.914 37.500 0.00 0.00 0.00 3.41
205 206 6.513180 TGATCGTTCTGTTTACTCTTCACTT 58.487 36.000 0.00 0.00 0.00 3.16
206 207 6.984474 TGATCGTTCTGTTTACTCTTCACTTT 59.016 34.615 0.00 0.00 0.00 2.66
207 208 7.494625 TGATCGTTCTGTTTACTCTTCACTTTT 59.505 33.333 0.00 0.00 0.00 2.27
208 209 7.605410 TCGTTCTGTTTACTCTTCACTTTTT 57.395 32.000 0.00 0.00 0.00 1.94
209 210 8.706492 TCGTTCTGTTTACTCTTCACTTTTTA 57.294 30.769 0.00 0.00 0.00 1.52
210 211 8.814235 TCGTTCTGTTTACTCTTCACTTTTTAG 58.186 33.333 0.00 0.00 0.00 1.85
211 212 8.814235 CGTTCTGTTTACTCTTCACTTTTTAGA 58.186 33.333 0.00 0.00 0.00 2.10
214 215 9.751542 TCTGTTTACTCTTCACTTTTTAGAGAG 57.248 33.333 0.00 0.00 38.95 3.20
215 216 9.751542 CTGTTTACTCTTCACTTTTTAGAGAGA 57.248 33.333 0.00 0.00 38.95 3.10
221 222 9.936759 ACTCTTCACTTTTTAGAGAGATTAAGG 57.063 33.333 0.00 0.00 38.95 2.69
222 223 8.779354 TCTTCACTTTTTAGAGAGATTAAGGC 57.221 34.615 0.00 0.00 0.00 4.35
223 224 8.598041 TCTTCACTTTTTAGAGAGATTAAGGCT 58.402 33.333 0.00 0.00 0.00 4.58
224 225 8.553459 TTCACTTTTTAGAGAGATTAAGGCTG 57.447 34.615 0.00 0.00 0.00 4.85
225 226 7.680730 TCACTTTTTAGAGAGATTAAGGCTGT 58.319 34.615 0.00 0.00 0.00 4.40
226 227 7.604164 TCACTTTTTAGAGAGATTAAGGCTGTG 59.396 37.037 0.00 0.00 0.00 3.66
227 228 7.389053 CACTTTTTAGAGAGATTAAGGCTGTGT 59.611 37.037 0.00 0.00 0.00 3.72
228 229 7.939588 ACTTTTTAGAGAGATTAAGGCTGTGTT 59.060 33.333 0.00 0.00 0.00 3.32
229 230 7.907214 TTTTAGAGAGATTAAGGCTGTGTTC 57.093 36.000 0.00 0.00 0.00 3.18
230 231 4.116747 AGAGAGATTAAGGCTGTGTTCG 57.883 45.455 0.00 0.00 0.00 3.95
231 232 3.118956 AGAGAGATTAAGGCTGTGTTCGG 60.119 47.826 0.00 0.00 0.00 4.30
232 233 2.093447 AGAGATTAAGGCTGTGTTCGGG 60.093 50.000 0.00 0.00 0.00 5.14
233 234 1.906574 AGATTAAGGCTGTGTTCGGGA 59.093 47.619 0.00 0.00 0.00 5.14
234 235 2.304761 AGATTAAGGCTGTGTTCGGGAA 59.695 45.455 0.00 0.00 0.00 3.97
235 236 2.871096 TTAAGGCTGTGTTCGGGAAT 57.129 45.000 0.00 0.00 0.00 3.01
236 237 2.396590 TAAGGCTGTGTTCGGGAATC 57.603 50.000 0.00 0.00 0.00 2.52
237 238 0.322546 AAGGCTGTGTTCGGGAATCC 60.323 55.000 0.00 0.00 0.00 3.01
238 239 1.201429 AGGCTGTGTTCGGGAATCCT 61.201 55.000 0.00 0.00 0.00 3.24
239 240 0.744771 GGCTGTGTTCGGGAATCCTC 60.745 60.000 0.00 0.00 0.00 3.71
240 241 0.250513 GCTGTGTTCGGGAATCCTCT 59.749 55.000 0.00 0.00 0.00 3.69
241 242 2.009042 GCTGTGTTCGGGAATCCTCTG 61.009 57.143 0.00 0.00 0.00 3.35
242 243 0.036388 TGTGTTCGGGAATCCTCTGC 60.036 55.000 0.00 0.00 0.00 4.26
243 244 0.250513 GTGTTCGGGAATCCTCTGCT 59.749 55.000 0.00 0.00 0.00 4.24
244 245 0.537188 TGTTCGGGAATCCTCTGCTC 59.463 55.000 0.00 0.00 0.00 4.26
245 246 0.179070 GTTCGGGAATCCTCTGCTCC 60.179 60.000 0.00 0.00 0.00 4.70
246 247 0.325671 TTCGGGAATCCTCTGCTCCT 60.326 55.000 0.00 0.00 0.00 3.69
247 248 0.757188 TCGGGAATCCTCTGCTCCTC 60.757 60.000 0.00 0.00 0.00 3.71
248 249 1.753368 CGGGAATCCTCTGCTCCTCC 61.753 65.000 0.00 0.00 0.00 4.30
249 250 1.745264 GGAATCCTCTGCTCCTCCG 59.255 63.158 0.00 0.00 0.00 4.63
250 251 1.068921 GAATCCTCTGCTCCTCCGC 59.931 63.158 0.00 0.00 0.00 5.54
251 252 2.376228 GAATCCTCTGCTCCTCCGCC 62.376 65.000 0.00 0.00 0.00 6.13
252 253 3.686098 ATCCTCTGCTCCTCCGCCA 62.686 63.158 0.00 0.00 0.00 5.69
253 254 3.847602 CCTCTGCTCCTCCGCCAG 61.848 72.222 0.00 0.00 0.00 4.85
254 255 3.847602 CTCTGCTCCTCCGCCAGG 61.848 72.222 0.00 0.00 45.15 4.45
292 293 4.508128 CCCTTTCGCCGCTCGCTA 62.508 66.667 0.00 0.00 38.27 4.26
293 294 2.508439 CCTTTCGCCGCTCGCTAA 60.508 61.111 0.00 0.00 38.27 3.09
294 295 2.098233 CCTTTCGCCGCTCGCTAAA 61.098 57.895 0.00 0.00 38.27 1.85
295 296 1.632046 CCTTTCGCCGCTCGCTAAAA 61.632 55.000 0.00 0.00 32.30 1.52
296 297 0.373716 CTTTCGCCGCTCGCTAAAAT 59.626 50.000 0.00 0.00 32.30 1.82
297 298 0.800012 TTTCGCCGCTCGCTAAAATT 59.200 45.000 0.00 0.00 38.27 1.82
298 299 0.096281 TTCGCCGCTCGCTAAAATTG 59.904 50.000 0.00 0.00 38.27 2.32
299 300 0.738063 TCGCCGCTCGCTAAAATTGA 60.738 50.000 0.00 0.00 38.27 2.57
300 301 0.096281 CGCCGCTCGCTAAAATTGAA 59.904 50.000 0.00 0.00 34.21 2.69
301 302 1.535088 GCCGCTCGCTAAAATTGAAC 58.465 50.000 0.00 0.00 0.00 3.18
302 303 1.130561 GCCGCTCGCTAAAATTGAACT 59.869 47.619 0.00 0.00 0.00 3.01
303 304 2.774007 CCGCTCGCTAAAATTGAACTG 58.226 47.619 0.00 0.00 0.00 3.16
304 305 2.476185 CCGCTCGCTAAAATTGAACTGG 60.476 50.000 0.00 0.00 0.00 4.00
305 306 2.159627 CGCTCGCTAAAATTGAACTGGT 59.840 45.455 0.00 0.00 0.00 4.00
306 307 3.364964 CGCTCGCTAAAATTGAACTGGTT 60.365 43.478 0.00 0.00 0.00 3.67
307 308 3.914364 GCTCGCTAAAATTGAACTGGTTG 59.086 43.478 0.00 0.00 0.00 3.77
308 309 3.896122 TCGCTAAAATTGAACTGGTTGC 58.104 40.909 0.00 0.00 0.00 4.17
309 310 2.986479 CGCTAAAATTGAACTGGTTGCC 59.014 45.455 0.00 0.00 0.00 4.52
310 311 2.986479 GCTAAAATTGAACTGGTTGCCG 59.014 45.455 0.00 0.00 0.00 5.69
311 312 1.864565 AAAATTGAACTGGTTGCCGC 58.135 45.000 0.00 0.00 0.00 6.53
312 313 1.039856 AAATTGAACTGGTTGCCGCT 58.960 45.000 0.00 0.00 0.00 5.52
313 314 0.598065 AATTGAACTGGTTGCCGCTC 59.402 50.000 0.00 0.00 0.00 5.03
314 315 1.244019 ATTGAACTGGTTGCCGCTCC 61.244 55.000 0.00 0.00 0.00 4.70
315 316 3.423154 GAACTGGTTGCCGCTCCG 61.423 66.667 0.00 0.00 0.00 4.63
336 337 2.579787 CGCGGCGGAGTTACAGAG 60.580 66.667 15.84 0.00 0.00 3.35
337 338 2.886124 GCGGCGGAGTTACAGAGC 60.886 66.667 9.78 0.00 0.00 4.09
338 339 2.571757 CGGCGGAGTTACAGAGCA 59.428 61.111 0.00 0.00 0.00 4.26
339 340 1.517257 CGGCGGAGTTACAGAGCAG 60.517 63.158 0.00 0.00 0.00 4.24
340 341 1.890894 GGCGGAGTTACAGAGCAGA 59.109 57.895 0.00 0.00 0.00 4.26
341 342 0.179124 GGCGGAGTTACAGAGCAGAG 60.179 60.000 0.00 0.00 0.00 3.35
342 343 0.528470 GCGGAGTTACAGAGCAGAGT 59.472 55.000 0.00 0.00 0.00 3.24
343 344 1.734047 GCGGAGTTACAGAGCAGAGTG 60.734 57.143 0.00 0.00 0.00 3.51
344 345 1.813178 CGGAGTTACAGAGCAGAGTGA 59.187 52.381 0.00 0.00 0.00 3.41
345 346 2.425312 CGGAGTTACAGAGCAGAGTGAT 59.575 50.000 0.00 0.00 0.00 3.06
346 347 3.119316 CGGAGTTACAGAGCAGAGTGATT 60.119 47.826 0.00 0.00 0.00 2.57
347 348 4.429108 GGAGTTACAGAGCAGAGTGATTC 58.571 47.826 0.00 0.00 0.00 2.52
348 349 4.429108 GAGTTACAGAGCAGAGTGATTCC 58.571 47.826 0.00 0.00 0.00 3.01
349 350 3.119316 AGTTACAGAGCAGAGTGATTCCG 60.119 47.826 0.00 0.00 0.00 4.30
350 351 1.550327 ACAGAGCAGAGTGATTCCGA 58.450 50.000 0.00 0.00 0.00 4.55
351 352 1.895798 ACAGAGCAGAGTGATTCCGAA 59.104 47.619 0.00 0.00 0.00 4.30
352 353 2.266554 CAGAGCAGAGTGATTCCGAAC 58.733 52.381 0.00 0.00 0.00 3.95
353 354 1.135257 AGAGCAGAGTGATTCCGAACG 60.135 52.381 0.00 0.00 0.00 3.95
354 355 0.108615 AGCAGAGTGATTCCGAACGG 60.109 55.000 6.94 6.94 0.00 4.44
355 356 1.696832 GCAGAGTGATTCCGAACGGC 61.697 60.000 8.48 0.00 34.68 5.68
356 357 1.084370 CAGAGTGATTCCGAACGGCC 61.084 60.000 8.48 0.00 34.68 6.13
357 358 1.814169 GAGTGATTCCGAACGGCCC 60.814 63.158 8.48 1.07 34.68 5.80
358 359 2.822701 GTGATTCCGAACGGCCCC 60.823 66.667 8.48 0.74 34.68 5.80
359 360 3.006728 TGATTCCGAACGGCCCCT 61.007 61.111 8.48 0.00 34.68 4.79
360 361 1.686455 TGATTCCGAACGGCCCCTA 60.686 57.895 8.48 0.00 34.68 3.53
361 362 1.266160 TGATTCCGAACGGCCCCTAA 61.266 55.000 8.48 0.00 34.68 2.69
362 363 0.532196 GATTCCGAACGGCCCCTAAG 60.532 60.000 8.48 0.00 34.68 2.18
363 364 1.269703 ATTCCGAACGGCCCCTAAGT 61.270 55.000 8.48 0.00 34.68 2.24
364 365 0.614415 TTCCGAACGGCCCCTAAGTA 60.614 55.000 8.48 0.00 34.68 2.24
365 366 1.142531 CCGAACGGCCCCTAAGTAC 59.857 63.158 0.00 0.00 0.00 2.73
366 367 1.325476 CCGAACGGCCCCTAAGTACT 61.325 60.000 0.00 0.00 0.00 2.73
367 368 0.533951 CGAACGGCCCCTAAGTACTT 59.466 55.000 13.68 13.68 0.00 2.24
368 369 1.750778 CGAACGGCCCCTAAGTACTTA 59.249 52.381 14.52 14.52 0.00 2.24
369 370 2.166254 CGAACGGCCCCTAAGTACTTAA 59.834 50.000 15.95 1.43 0.00 1.85
370 371 3.181472 CGAACGGCCCCTAAGTACTTAAT 60.181 47.826 15.95 0.00 0.00 1.40
371 372 3.832615 ACGGCCCCTAAGTACTTAATG 57.167 47.619 15.95 10.08 0.00 1.90
372 373 2.436911 ACGGCCCCTAAGTACTTAATGG 59.563 50.000 15.95 17.80 0.00 3.16
373 374 2.224450 CGGCCCCTAAGTACTTAATGGG 60.224 54.545 29.52 29.52 38.89 4.00
374 375 2.781757 GGCCCCTAAGTACTTAATGGGT 59.218 50.000 31.55 8.47 38.48 4.51
375 376 3.203710 GGCCCCTAAGTACTTAATGGGTT 59.796 47.826 31.55 7.86 38.48 4.11
376 377 4.325579 GGCCCCTAAGTACTTAATGGGTTT 60.326 45.833 31.55 7.27 38.48 3.27
377 378 5.266788 GCCCCTAAGTACTTAATGGGTTTT 58.733 41.667 31.55 6.67 38.48 2.43
378 379 5.359009 GCCCCTAAGTACTTAATGGGTTTTC 59.641 44.000 31.55 20.40 38.48 2.29
379 380 5.587443 CCCCTAAGTACTTAATGGGTTTTCG 59.413 44.000 27.37 15.16 34.73 3.46
380 381 5.587443 CCCTAAGTACTTAATGGGTTTTCGG 59.413 44.000 23.23 14.16 30.19 4.30
381 382 6.408869 CCTAAGTACTTAATGGGTTTTCGGA 58.591 40.000 15.95 0.00 0.00 4.55
382 383 6.880529 CCTAAGTACTTAATGGGTTTTCGGAA 59.119 38.462 15.95 0.00 0.00 4.30
383 384 7.391275 CCTAAGTACTTAATGGGTTTTCGGAAA 59.609 37.037 15.95 0.00 0.00 3.13
384 385 7.585579 AAGTACTTAATGGGTTTTCGGAAAA 57.414 32.000 11.68 11.68 0.00 2.29
398 399 8.797266 GTTTTCGGAAAACTTGTATTTCTCAT 57.203 30.769 29.69 0.00 45.55 2.90
399 400 9.887406 GTTTTCGGAAAACTTGTATTTCTCATA 57.113 29.630 29.69 0.00 45.55 2.15
402 403 8.126871 TCGGAAAACTTGTATTTCTCATATCG 57.873 34.615 0.00 0.00 37.06 2.92
403 404 6.846283 CGGAAAACTTGTATTTCTCATATCGC 59.154 38.462 0.00 0.00 37.06 4.58
404 405 7.254455 CGGAAAACTTGTATTTCTCATATCGCT 60.254 37.037 0.00 0.00 37.06 4.93
405 406 9.042008 GGAAAACTTGTATTTCTCATATCGCTA 57.958 33.333 0.00 0.00 37.06 4.26
407 408 9.817809 AAAACTTGTATTTCTCATATCGCTAGA 57.182 29.630 0.00 0.00 0.00 2.43
408 409 9.817809 AAACTTGTATTTCTCATATCGCTAGAA 57.182 29.630 0.00 0.00 0.00 2.10
409 410 8.804688 ACTTGTATTTCTCATATCGCTAGAAC 57.195 34.615 0.00 0.00 0.00 3.01
410 411 8.634444 ACTTGTATTTCTCATATCGCTAGAACT 58.366 33.333 0.00 0.00 0.00 3.01
411 412 9.469807 CTTGTATTTCTCATATCGCTAGAACTT 57.530 33.333 0.00 0.00 0.00 2.66
425 426 9.819267 ATCGCTAGAACTTAAAATAAAGCTAGT 57.181 29.630 0.00 0.00 29.17 2.57
426 427 9.084164 TCGCTAGAACTTAAAATAAAGCTAGTG 57.916 33.333 0.00 0.00 34.44 2.74
427 428 9.084164 CGCTAGAACTTAAAATAAAGCTAGTGA 57.916 33.333 0.00 0.00 34.73 3.41
444 445 7.401484 GCTAGTGATAGCTTAGCTAGTTTTG 57.599 40.000 19.15 8.79 44.66 2.44
445 446 6.074034 GCTAGTGATAGCTTAGCTAGTTTTGC 60.074 42.308 19.15 13.95 44.66 3.68
446 447 5.983540 AGTGATAGCTTAGCTAGTTTTGCT 58.016 37.500 19.15 8.44 44.66 3.91
447 448 7.113658 AGTGATAGCTTAGCTAGTTTTGCTA 57.886 36.000 19.15 12.80 44.66 3.49
448 449 7.206687 AGTGATAGCTTAGCTAGTTTTGCTAG 58.793 38.462 19.15 0.00 44.66 3.42
481 482 3.863407 CCAGGACTTGGTTAGGAGC 57.137 57.895 0.00 0.00 42.41 4.70
482 483 1.280457 CCAGGACTTGGTTAGGAGCT 58.720 55.000 0.00 0.00 42.41 4.09
483 484 1.065854 CCAGGACTTGGTTAGGAGCTG 60.066 57.143 0.00 0.00 42.41 4.24
484 485 1.065854 CAGGACTTGGTTAGGAGCTGG 60.066 57.143 0.00 0.00 0.00 4.85
485 486 0.984995 GGACTTGGTTAGGAGCTGGT 59.015 55.000 0.00 0.00 0.00 4.00
486 487 1.066071 GGACTTGGTTAGGAGCTGGTC 60.066 57.143 0.00 0.00 0.00 4.02
494 495 3.377656 GGAGCTGGTCCAGTCGAA 58.622 61.111 20.44 0.00 46.10 3.71
495 496 1.216710 GGAGCTGGTCCAGTCGAAG 59.783 63.158 20.44 0.00 46.10 3.79
496 497 1.536943 GGAGCTGGTCCAGTCGAAGT 61.537 60.000 20.44 0.00 46.10 3.01
497 498 1.174783 GAGCTGGTCCAGTCGAAGTA 58.825 55.000 20.24 0.00 33.43 2.24
498 499 1.133407 GAGCTGGTCCAGTCGAAGTAG 59.867 57.143 20.24 0.00 33.43 2.57
499 500 0.889306 GCTGGTCCAGTCGAAGTAGT 59.111 55.000 20.24 0.00 33.43 2.73
500 501 1.402984 GCTGGTCCAGTCGAAGTAGTG 60.403 57.143 20.24 0.00 33.43 2.74
501 502 1.202582 CTGGTCCAGTCGAAGTAGTGG 59.797 57.143 11.09 0.00 40.76 4.00
502 503 1.202964 TGGTCCAGTCGAAGTAGTGGA 60.203 52.381 0.00 0.00 44.94 4.02
504 505 2.873094 TCCAGTCGAAGTAGTGGAGA 57.127 50.000 0.00 0.00 42.79 3.71
505 506 3.367646 TCCAGTCGAAGTAGTGGAGAT 57.632 47.619 0.00 0.00 42.79 2.75
506 507 4.498894 TCCAGTCGAAGTAGTGGAGATA 57.501 45.455 0.00 0.00 42.79 1.98
507 508 4.452825 TCCAGTCGAAGTAGTGGAGATAG 58.547 47.826 0.00 0.00 42.79 2.08
508 509 3.003897 CCAGTCGAAGTAGTGGAGATAGC 59.996 52.174 0.00 0.00 41.78 2.97
509 510 3.628032 CAGTCGAAGTAGTGGAGATAGCA 59.372 47.826 0.00 0.00 0.00 3.49
510 511 4.277174 CAGTCGAAGTAGTGGAGATAGCAT 59.723 45.833 0.00 0.00 0.00 3.79
511 512 4.517453 AGTCGAAGTAGTGGAGATAGCATC 59.483 45.833 0.00 0.00 0.00 3.91
512 513 3.498777 TCGAAGTAGTGGAGATAGCATCG 59.501 47.826 0.00 0.00 0.00 3.84
513 514 3.498777 CGAAGTAGTGGAGATAGCATCGA 59.501 47.826 0.00 0.00 0.00 3.59
514 515 4.023963 CGAAGTAGTGGAGATAGCATCGAA 60.024 45.833 0.00 0.00 0.00 3.71
515 516 5.335269 CGAAGTAGTGGAGATAGCATCGAAT 60.335 44.000 0.00 0.00 0.00 3.34
516 517 5.384063 AGTAGTGGAGATAGCATCGAATG 57.616 43.478 0.00 0.00 0.00 2.67
517 518 5.073428 AGTAGTGGAGATAGCATCGAATGA 58.927 41.667 0.00 0.00 0.00 2.57
518 519 5.714333 AGTAGTGGAGATAGCATCGAATGAT 59.286 40.000 0.00 0.00 34.28 2.45
519 520 5.480642 AGTGGAGATAGCATCGAATGATT 57.519 39.130 0.00 0.00 30.49 2.57
520 521 5.236282 AGTGGAGATAGCATCGAATGATTG 58.764 41.667 0.00 0.00 30.49 2.67
521 522 4.993584 GTGGAGATAGCATCGAATGATTGT 59.006 41.667 0.00 0.00 30.49 2.71
522 523 6.015095 AGTGGAGATAGCATCGAATGATTGTA 60.015 38.462 0.00 0.00 30.49 2.41
523 524 6.646653 GTGGAGATAGCATCGAATGATTGTAA 59.353 38.462 0.00 0.00 30.49 2.41
524 525 7.171508 GTGGAGATAGCATCGAATGATTGTAAA 59.828 37.037 0.00 0.00 30.49 2.01
525 526 7.386025 TGGAGATAGCATCGAATGATTGTAAAG 59.614 37.037 0.00 0.00 30.49 1.85
526 527 7.600375 GGAGATAGCATCGAATGATTGTAAAGA 59.400 37.037 0.00 0.00 30.49 2.52
527 528 9.149225 GAGATAGCATCGAATGATTGTAAAGAT 57.851 33.333 0.00 0.00 30.49 2.40
528 529 8.933807 AGATAGCATCGAATGATTGTAAAGATG 58.066 33.333 0.00 0.00 37.60 2.90
529 530 6.932356 AGCATCGAATGATTGTAAAGATGT 57.068 33.333 0.00 0.00 37.08 3.06
530 531 7.325660 AGCATCGAATGATTGTAAAGATGTT 57.674 32.000 0.00 0.00 37.08 2.71
531 532 7.191551 AGCATCGAATGATTGTAAAGATGTTG 58.808 34.615 0.00 0.00 37.08 3.33
532 533 6.968904 GCATCGAATGATTGTAAAGATGTTGT 59.031 34.615 0.00 0.00 37.08 3.32
533 534 7.044510 GCATCGAATGATTGTAAAGATGTTGTG 60.045 37.037 0.00 0.00 37.08 3.33
534 535 7.665561 TCGAATGATTGTAAAGATGTTGTGA 57.334 32.000 0.00 0.00 0.00 3.58
535 536 8.267620 TCGAATGATTGTAAAGATGTTGTGAT 57.732 30.769 0.00 0.00 0.00 3.06
536 537 8.729756 TCGAATGATTGTAAAGATGTTGTGATT 58.270 29.630 0.00 0.00 0.00 2.57
537 538 8.791605 CGAATGATTGTAAAGATGTTGTGATTG 58.208 33.333 0.00 0.00 0.00 2.67
538 539 9.844790 GAATGATTGTAAAGATGTTGTGATTGA 57.155 29.630 0.00 0.00 0.00 2.57
539 540 9.850628 AATGATTGTAAAGATGTTGTGATTGAG 57.149 29.630 0.00 0.00 0.00 3.02
540 541 8.394971 TGATTGTAAAGATGTTGTGATTGAGT 57.605 30.769 0.00 0.00 0.00 3.41
541 542 9.500785 TGATTGTAAAGATGTTGTGATTGAGTA 57.499 29.630 0.00 0.00 0.00 2.59
550 551 8.400947 AGATGTTGTGATTGAGTAATACAATGC 58.599 33.333 0.00 0.00 37.96 3.56
551 552 7.686438 TGTTGTGATTGAGTAATACAATGCT 57.314 32.000 0.00 0.00 37.96 3.79
552 553 8.785329 TGTTGTGATTGAGTAATACAATGCTA 57.215 30.769 0.00 0.00 37.96 3.49
553 554 9.394767 TGTTGTGATTGAGTAATACAATGCTAT 57.605 29.630 0.00 0.00 37.96 2.97
557 558 9.884465 GTGATTGAGTAATACAATGCTATTTCC 57.116 33.333 0.00 0.00 37.96 3.13
558 559 9.066892 TGATTGAGTAATACAATGCTATTTCCC 57.933 33.333 0.00 0.00 37.96 3.97
559 560 7.817418 TTGAGTAATACAATGCTATTTCCCC 57.183 36.000 0.00 0.00 0.00 4.81
560 561 5.995282 TGAGTAATACAATGCTATTTCCCCG 59.005 40.000 0.00 0.00 0.00 5.73
561 562 5.313712 AGTAATACAATGCTATTTCCCCGG 58.686 41.667 0.00 0.00 0.00 5.73
562 563 2.649531 TACAATGCTATTTCCCCGGG 57.350 50.000 15.80 15.80 0.00 5.73
563 564 0.923358 ACAATGCTATTTCCCCGGGA 59.077 50.000 26.32 0.34 0.00 5.14
564 565 1.286553 ACAATGCTATTTCCCCGGGAA 59.713 47.619 26.32 15.52 40.27 3.97
614 618 0.600557 CAGTTCAGTCTCTGCCGAGT 59.399 55.000 4.97 0.00 38.45 4.18
653 664 3.047877 GCCGGGTGGACGACAAAG 61.048 66.667 2.18 0.00 37.49 2.77
784 795 1.259142 TGACCCCGCGTCTTCCATAA 61.259 55.000 4.92 0.00 42.49 1.90
793 806 2.093341 GCGTCTTCCATAAACCCTACCA 60.093 50.000 0.00 0.00 0.00 3.25
876 897 0.323087 TCGACTTGATCCGGTCTCCA 60.323 55.000 0.00 0.00 0.00 3.86
916 939 1.140852 TGTCAGGTCAGGTGTGAAAGG 59.859 52.381 0.00 0.00 33.27 3.11
1031 1055 2.067414 GTCTTCCTGACGAACTGGTC 57.933 55.000 0.00 0.00 38.50 4.02
1063 1087 1.870064 CAATCCAAGGGCCAGGAATT 58.130 50.000 19.79 12.32 37.48 2.17
1246 1270 4.467062 TGCTCTCGCTCGTCGCAG 62.467 66.667 0.00 0.00 39.08 5.18
1422 1446 3.458163 CTCAAGGACGCCGGGCTA 61.458 66.667 18.34 0.00 0.00 3.93
1468 1492 3.792736 GCACCACCGCCCCTGATA 61.793 66.667 0.00 0.00 0.00 2.15
1469 1493 2.189521 CACCACCGCCCCTGATAC 59.810 66.667 0.00 0.00 0.00 2.24
1471 1495 2.367202 ACCACCGCCCCTGATACAG 61.367 63.158 0.00 0.00 0.00 2.74
1681 1708 0.596083 CGCGCTCCAAGAGATCGATT 60.596 55.000 5.56 0.00 31.41 3.34
1703 1730 1.148759 GCGGAGAAACAGAGATCGGC 61.149 60.000 0.00 0.00 0.00 5.54
1725 1752 3.251004 CCTACAGCTTCAACCACTTTCAC 59.749 47.826 0.00 0.00 0.00 3.18
1849 1876 4.994201 GGTGCGCTGACGACGTGA 62.994 66.667 4.58 0.00 43.93 4.35
1851 1878 2.729491 TGCGCTGACGACGTGAAG 60.729 61.111 4.58 3.87 43.93 3.02
1947 1974 0.621609 AGCAGGTCGAGGTCTAGACT 59.378 55.000 21.88 8.54 35.85 3.24
1948 1975 1.018910 GCAGGTCGAGGTCTAGACTC 58.981 60.000 21.88 15.39 35.85 3.36
1949 1976 1.407712 GCAGGTCGAGGTCTAGACTCT 60.408 57.143 21.88 16.58 35.85 3.24
1950 1977 2.158928 GCAGGTCGAGGTCTAGACTCTA 60.159 54.545 21.88 7.48 35.85 2.43
1951 1978 3.724374 CAGGTCGAGGTCTAGACTCTAG 58.276 54.545 21.88 16.22 35.85 2.43
1952 1979 3.385433 CAGGTCGAGGTCTAGACTCTAGA 59.615 52.174 21.88 17.95 35.85 2.43
1953 1980 3.640029 AGGTCGAGGTCTAGACTCTAGAG 59.360 52.174 21.88 18.49 35.85 2.43
1968 1995 4.097286 ACTCTAGAGACAGAGCGGAAAATC 59.903 45.833 26.57 0.00 45.03 2.17
2070 2123 9.146586 CTGAAATTATGGGAGAATGGGAAATTA 57.853 33.333 0.00 0.00 0.00 1.40
2123 2178 0.977395 AACTGGTGTAGGTCAGCTCC 59.023 55.000 0.00 0.00 43.97 4.70
2205 2260 3.049080 GCTGGAAAGAGCCCCCGAT 62.049 63.158 0.00 0.00 32.35 4.18
2206 2261 1.696097 GCTGGAAAGAGCCCCCGATA 61.696 60.000 0.00 0.00 32.35 2.92
2207 2262 1.059913 CTGGAAAGAGCCCCCGATAT 58.940 55.000 0.00 0.00 0.00 1.63
2208 2263 1.421646 CTGGAAAGAGCCCCCGATATT 59.578 52.381 0.00 0.00 0.00 1.28
2209 2264 1.850345 TGGAAAGAGCCCCCGATATTT 59.150 47.619 0.00 0.00 0.00 1.40
2211 2266 2.143925 GAAAGAGCCCCCGATATTTCG 58.856 52.381 0.00 0.00 45.08 3.46
2233 2313 3.538634 AGTATTTCTACCAAGTCGGGC 57.461 47.619 0.00 0.00 40.22 6.13
2234 2314 3.105283 AGTATTTCTACCAAGTCGGGCT 58.895 45.455 0.00 0.00 40.22 5.19
2238 2318 2.467566 TCTACCAAGTCGGGCTTTTC 57.532 50.000 0.00 0.00 40.22 2.29
2244 2324 1.069906 CAAGTCGGGCTTTTCGAAGTG 60.070 52.381 0.00 0.00 38.42 3.16
2249 2329 0.171231 GGGCTTTTCGAAGTGCCATC 59.829 55.000 30.78 18.43 46.53 3.51
2250 2330 0.881118 GGCTTTTCGAAGTGCCATCA 59.119 50.000 27.53 0.00 44.34 3.07
2256 2336 5.007626 GCTTTTCGAAGTGCCATCACATATA 59.992 40.000 11.76 0.00 45.49 0.86
2258 2338 7.566760 TTTTCGAAGTGCCATCACATATATT 57.433 32.000 0.00 0.00 45.49 1.28
2316 3116 7.210718 TCTTATCGAAGTGTCAGTTTAGTCA 57.789 36.000 0.00 0.00 34.03 3.41
2319 3119 9.737427 CTTATCGAAGTGTCAGTTTAGTCATAT 57.263 33.333 0.00 0.00 0.00 1.78
2353 3153 4.135306 TGCACGTTTAGTTACCAATTCCA 58.865 39.130 0.00 0.00 0.00 3.53
2388 3199 4.760047 TTTGCCCGAGCGCTCTCC 62.760 66.667 32.88 20.88 44.31 3.71
2407 3218 5.023452 TCTCCAACCTGCTACAATCTAAGA 58.977 41.667 0.00 0.00 0.00 2.10
2427 3238 1.315257 GCATCTCCAACGGCAACCAT 61.315 55.000 0.00 0.00 0.00 3.55
2428 3239 2.016604 GCATCTCCAACGGCAACCATA 61.017 52.381 0.00 0.00 0.00 2.74
2431 3242 3.080300 TCTCCAACGGCAACCATAAAT 57.920 42.857 0.00 0.00 0.00 1.40
2432 3243 3.426615 TCTCCAACGGCAACCATAAATT 58.573 40.909 0.00 0.00 0.00 1.82
2435 3246 4.561105 TCCAACGGCAACCATAAATTTTC 58.439 39.130 0.00 0.00 0.00 2.29
2436 3247 4.282195 TCCAACGGCAACCATAAATTTTCT 59.718 37.500 0.00 0.00 0.00 2.52
2439 3250 4.816392 ACGGCAACCATAAATTTTCTTCC 58.184 39.130 0.00 0.00 0.00 3.46
2440 3251 3.857093 CGGCAACCATAAATTTTCTTCCG 59.143 43.478 0.00 0.00 0.00 4.30
2441 3252 3.616821 GGCAACCATAAATTTTCTTCCGC 59.383 43.478 0.00 0.00 0.00 5.54
2442 3253 4.241681 GCAACCATAAATTTTCTTCCGCA 58.758 39.130 0.00 0.00 0.00 5.69
2443 3254 4.869861 GCAACCATAAATTTTCTTCCGCAT 59.130 37.500 0.00 0.00 0.00 4.73
2446 3257 6.279513 ACCATAAATTTTCTTCCGCATTCA 57.720 33.333 0.00 0.00 0.00 2.57
2447 3258 6.877236 ACCATAAATTTTCTTCCGCATTCAT 58.123 32.000 0.00 0.00 0.00 2.57
2450 3261 7.306167 CCATAAATTTTCTTCCGCATTCATTCG 60.306 37.037 0.00 0.00 0.00 3.34
2766 3577 6.260714 TCAATGCTAGCGACATACATTTTGAT 59.739 34.615 10.77 0.00 0.00 2.57
2769 3580 7.728847 TGCTAGCGACATACATTTTGATAAT 57.271 32.000 10.77 0.00 0.00 1.28
2807 3619 5.493735 GGAGAAATTCGATCAAACACGATC 58.506 41.667 0.00 0.00 38.30 3.69
2831 3645 8.365399 TCTGATTTCATATAAACATGACGGAC 57.635 34.615 0.00 0.00 34.69 4.79
2864 3678 5.447624 TTACATCGATTAAGCGGATCTCA 57.552 39.130 13.85 0.00 0.00 3.27
2924 3738 1.144708 TGTCCAGCCATGAACCAAGAA 59.855 47.619 0.00 0.00 0.00 2.52
3065 3879 2.796651 GGCCAAAGATGCTCAGCG 59.203 61.111 0.00 0.00 0.00 5.18
3113 3927 3.706373 GAGCGGTGGCCTTCCTGA 61.706 66.667 3.32 0.00 41.24 3.86
3177 4004 2.509561 GGACGAGCCGGCTTCTTC 60.510 66.667 33.34 24.97 34.07 2.87
3180 4545 3.181967 CGAGCCGGCTTCTTCGTG 61.182 66.667 33.34 10.77 0.00 4.35
3183 4548 3.423154 GCCGGCTTCTTCGTGGTG 61.423 66.667 22.15 0.00 0.00 4.17
3221 4586 2.283529 GCGTTGTCCTCCTCCTCCA 61.284 63.158 0.00 0.00 0.00 3.86
3251 4629 0.818040 GAACACCGCCTTGTCCACTT 60.818 55.000 0.00 0.00 0.00 3.16
3252 4630 1.101049 AACACCGCCTTGTCCACTTG 61.101 55.000 0.00 0.00 0.00 3.16
3253 4631 1.227823 CACCGCCTTGTCCACTTGA 60.228 57.895 0.00 0.00 0.00 3.02
3295 4673 2.434359 GTCACCTGCTGCCGGTAC 60.434 66.667 15.58 10.38 32.37 3.34
3299 4677 4.814294 CCTGCTGCCGGTACCGTC 62.814 72.222 31.24 21.47 37.81 4.79
3300 4678 4.063967 CTGCTGCCGGTACCGTCA 62.064 66.667 31.24 25.10 37.81 4.35
3302 4680 2.125269 GCTGCCGGTACCGTCAAT 60.125 61.111 31.24 0.00 37.81 2.57
3303 4681 1.142314 GCTGCCGGTACCGTCAATA 59.858 57.895 31.24 12.34 37.81 1.90
3304 4682 0.460635 GCTGCCGGTACCGTCAATAA 60.461 55.000 31.24 10.07 37.81 1.40
3305 4683 2.008045 GCTGCCGGTACCGTCAATAAA 61.008 52.381 31.24 2.66 37.81 1.40
3306 4684 2.348660 CTGCCGGTACCGTCAATAAAA 58.651 47.619 31.24 1.88 37.81 1.52
3307 4685 2.940410 CTGCCGGTACCGTCAATAAAAT 59.060 45.455 31.24 0.00 37.81 1.82
3308 4686 2.937799 TGCCGGTACCGTCAATAAAATC 59.062 45.455 31.24 8.52 37.81 2.17
3309 4687 2.288729 GCCGGTACCGTCAATAAAATCC 59.711 50.000 31.24 2.73 37.81 3.01
3310 4688 2.540931 CCGGTACCGTCAATAAAATCCG 59.459 50.000 31.24 8.66 37.81 4.18
3311 4689 2.033492 CGGTACCGTCAATAAAATCCGC 60.033 50.000 26.39 0.00 34.35 5.54
3313 4691 3.246936 GGTACCGTCAATAAAATCCGCTC 59.753 47.826 0.00 0.00 0.00 5.03
3314 4692 3.261981 ACCGTCAATAAAATCCGCTCT 57.738 42.857 0.00 0.00 0.00 4.09
3315 4693 3.606687 ACCGTCAATAAAATCCGCTCTT 58.393 40.909 0.00 0.00 0.00 2.85
3318 4696 4.142687 CCGTCAATAAAATCCGCTCTTTGT 60.143 41.667 0.00 0.00 0.00 2.83
3319 4697 5.022021 CGTCAATAAAATCCGCTCTTTGTC 58.978 41.667 0.00 0.00 0.00 3.18
3320 4698 5.022021 GTCAATAAAATCCGCTCTTTGTCG 58.978 41.667 0.00 0.00 0.00 4.35
3321 4699 4.094294 TCAATAAAATCCGCTCTTTGTCGG 59.906 41.667 0.00 0.00 46.52 4.79
3330 4708 4.663636 CGCTCTTTGTCGGAAAGTTAAT 57.336 40.909 7.46 0.00 0.00 1.40
3331 4709 5.030874 CGCTCTTTGTCGGAAAGTTAATT 57.969 39.130 7.46 0.00 0.00 1.40
3332 4710 4.846137 CGCTCTTTGTCGGAAAGTTAATTG 59.154 41.667 7.46 0.00 0.00 2.32
3333 4711 5.154222 GCTCTTTGTCGGAAAGTTAATTGG 58.846 41.667 7.46 0.00 0.00 3.16
3335 4713 5.378332 TCTTTGTCGGAAAGTTAATTGGGA 58.622 37.500 7.46 0.00 0.00 4.37
3339 4717 5.867330 TGTCGGAAAGTTAATTGGGAGTTA 58.133 37.500 0.00 0.00 0.00 2.24
3340 4718 6.297582 TGTCGGAAAGTTAATTGGGAGTTAA 58.702 36.000 0.00 0.00 0.00 2.01
3342 4720 7.094549 TGTCGGAAAGTTAATTGGGAGTTAATG 60.095 37.037 0.00 0.00 0.00 1.90
3344 4722 7.335924 TCGGAAAGTTAATTGGGAGTTAATGAG 59.664 37.037 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.972713 GTTAGTAGCCCCCAGATGATCA 59.027 50.000 0.00 0.00 0.00 2.92
2 3 3.352611 AGTTAGTAGCCCCCAGATGAT 57.647 47.619 0.00 0.00 0.00 2.45
3 4 2.868964 AGTTAGTAGCCCCCAGATGA 57.131 50.000 0.00 0.00 0.00 2.92
5 6 3.118371 CGAAAAGTTAGTAGCCCCCAGAT 60.118 47.826 0.00 0.00 0.00 2.90
6 7 2.235402 CGAAAAGTTAGTAGCCCCCAGA 59.765 50.000 0.00 0.00 0.00 3.86
7 8 2.629051 CGAAAAGTTAGTAGCCCCCAG 58.371 52.381 0.00 0.00 0.00 4.45
8 9 1.279846 CCGAAAAGTTAGTAGCCCCCA 59.720 52.381 0.00 0.00 0.00 4.96
9 10 2.015588 GCCGAAAAGTTAGTAGCCCCC 61.016 57.143 0.00 0.00 0.00 5.40
10 11 1.339342 TGCCGAAAAGTTAGTAGCCCC 60.339 52.381 0.00 0.00 0.00 5.80
11 12 2.103537 TGCCGAAAAGTTAGTAGCCC 57.896 50.000 0.00 0.00 0.00 5.19
12 13 2.223272 GCATGCCGAAAAGTTAGTAGCC 60.223 50.000 6.36 0.00 0.00 3.93
13 14 2.418628 TGCATGCCGAAAAGTTAGTAGC 59.581 45.455 16.68 0.00 0.00 3.58
14 15 3.063997 CCTGCATGCCGAAAAGTTAGTAG 59.936 47.826 16.68 0.20 0.00 2.57
15 16 3.006940 CCTGCATGCCGAAAAGTTAGTA 58.993 45.455 16.68 0.00 0.00 1.82
16 17 1.812571 CCTGCATGCCGAAAAGTTAGT 59.187 47.619 16.68 0.00 0.00 2.24
17 18 1.133025 CCCTGCATGCCGAAAAGTTAG 59.867 52.381 16.68 1.79 0.00 2.34
18 19 1.173043 CCCTGCATGCCGAAAAGTTA 58.827 50.000 16.68 0.00 0.00 2.24
19 20 1.966762 CCCTGCATGCCGAAAAGTT 59.033 52.632 16.68 0.00 0.00 2.66
20 21 2.639327 GCCCTGCATGCCGAAAAGT 61.639 57.895 16.68 0.00 0.00 2.66
21 22 1.880819 AAGCCCTGCATGCCGAAAAG 61.881 55.000 16.68 5.00 0.00 2.27
22 23 1.470996 AAAGCCCTGCATGCCGAAAA 61.471 50.000 16.68 0.00 0.00 2.29
23 24 1.907807 AAAGCCCTGCATGCCGAAA 60.908 52.632 16.68 0.00 0.00 3.46
24 25 2.283101 AAAGCCCTGCATGCCGAA 60.283 55.556 16.68 0.00 0.00 4.30
25 26 2.476852 TACAAAGCCCTGCATGCCGA 62.477 55.000 16.68 0.00 0.00 5.54
26 27 1.386525 ATACAAAGCCCTGCATGCCG 61.387 55.000 16.68 9.00 0.00 5.69
27 28 0.826062 AATACAAAGCCCTGCATGCC 59.174 50.000 16.68 0.00 0.00 4.40
28 29 1.534595 CGAATACAAAGCCCTGCATGC 60.535 52.381 11.82 11.82 0.00 4.06
29 30 1.745087 ACGAATACAAAGCCCTGCATG 59.255 47.619 0.00 0.00 0.00 4.06
30 31 1.745087 CACGAATACAAAGCCCTGCAT 59.255 47.619 0.00 0.00 0.00 3.96
31 32 1.164411 CACGAATACAAAGCCCTGCA 58.836 50.000 0.00 0.00 0.00 4.41
32 33 0.179163 GCACGAATACAAAGCCCTGC 60.179 55.000 0.00 0.00 0.00 4.85
33 34 1.131126 CTGCACGAATACAAAGCCCTG 59.869 52.381 0.00 0.00 0.00 4.45
34 35 1.003118 TCTGCACGAATACAAAGCCCT 59.997 47.619 0.00 0.00 0.00 5.19
35 36 1.398390 CTCTGCACGAATACAAAGCCC 59.602 52.381 0.00 0.00 0.00 5.19
36 37 2.094417 GTCTCTGCACGAATACAAAGCC 59.906 50.000 0.00 0.00 0.00 4.35
37 38 2.094417 GGTCTCTGCACGAATACAAAGC 59.906 50.000 0.00 0.00 0.00 3.51
38 39 2.673368 GGGTCTCTGCACGAATACAAAG 59.327 50.000 0.00 0.00 0.00 2.77
39 40 2.614481 GGGGTCTCTGCACGAATACAAA 60.614 50.000 0.00 0.00 0.00 2.83
40 41 1.066430 GGGGTCTCTGCACGAATACAA 60.066 52.381 0.00 0.00 0.00 2.41
41 42 0.535335 GGGGTCTCTGCACGAATACA 59.465 55.000 0.00 0.00 0.00 2.29
42 43 0.179081 GGGGGTCTCTGCACGAATAC 60.179 60.000 0.00 0.00 0.00 1.89
43 44 0.325296 AGGGGGTCTCTGCACGAATA 60.325 55.000 0.00 0.00 0.00 1.75
44 45 1.201429 AAGGGGGTCTCTGCACGAAT 61.201 55.000 0.00 0.00 0.00 3.34
45 46 1.841556 AAGGGGGTCTCTGCACGAA 60.842 57.895 0.00 0.00 0.00 3.85
46 47 2.203788 AAGGGGGTCTCTGCACGA 60.204 61.111 0.00 0.00 0.00 4.35
47 48 2.046892 CAAGGGGGTCTCTGCACG 60.047 66.667 0.00 0.00 0.00 5.34
48 49 1.298014 CTCAAGGGGGTCTCTGCAC 59.702 63.158 0.00 0.00 0.00 4.57
49 50 1.920325 CCTCAAGGGGGTCTCTGCA 60.920 63.158 0.00 0.00 0.00 4.41
50 51 2.993853 CCTCAAGGGGGTCTCTGC 59.006 66.667 0.00 0.00 0.00 4.26
51 52 2.993853 GCCTCAAGGGGGTCTCTG 59.006 66.667 0.00 0.00 35.18 3.35
52 53 2.685380 CGCCTCAAGGGGGTCTCT 60.685 66.667 5.23 0.00 43.64 3.10
59 60 2.042831 CAAAGCTCCGCCTCAAGGG 61.043 63.158 0.00 0.00 35.18 3.95
60 61 1.302832 ACAAAGCTCCGCCTCAAGG 60.303 57.895 0.00 0.00 38.53 3.61
61 62 1.871772 CACAAAGCTCCGCCTCAAG 59.128 57.895 0.00 0.00 0.00 3.02
62 63 2.260869 GCACAAAGCTCCGCCTCAA 61.261 57.895 0.00 0.00 41.15 3.02
63 64 2.669569 GCACAAAGCTCCGCCTCA 60.670 61.111 0.00 0.00 41.15 3.86
64 65 3.793144 CGCACAAAGCTCCGCCTC 61.793 66.667 0.00 0.00 42.61 4.70
65 66 4.626081 ACGCACAAAGCTCCGCCT 62.626 61.111 0.00 0.00 42.61 5.52
66 67 4.389576 CACGCACAAAGCTCCGCC 62.390 66.667 0.00 0.00 42.61 6.13
67 68 1.635663 ATACACGCACAAAGCTCCGC 61.636 55.000 0.00 0.00 42.61 5.54
68 69 0.095245 CATACACGCACAAAGCTCCG 59.905 55.000 0.00 0.00 42.61 4.63
69 70 0.447801 CCATACACGCACAAAGCTCC 59.552 55.000 0.00 0.00 42.61 4.70
70 71 1.394917 CTCCATACACGCACAAAGCTC 59.605 52.381 0.00 0.00 42.61 4.09
71 72 1.442769 CTCCATACACGCACAAAGCT 58.557 50.000 0.00 0.00 42.61 3.74
72 73 0.447801 CCTCCATACACGCACAAAGC 59.552 55.000 0.00 0.00 40.87 3.51
73 74 1.086696 CCCTCCATACACGCACAAAG 58.913 55.000 0.00 0.00 0.00 2.77
74 75 0.398696 ACCCTCCATACACGCACAAA 59.601 50.000 0.00 0.00 0.00 2.83
75 76 0.036765 GACCCTCCATACACGCACAA 60.037 55.000 0.00 0.00 0.00 3.33
76 77 0.902984 AGACCCTCCATACACGCACA 60.903 55.000 0.00 0.00 0.00 4.57
77 78 0.249398 AAGACCCTCCATACACGCAC 59.751 55.000 0.00 0.00 0.00 5.34
78 79 0.981183 AAAGACCCTCCATACACGCA 59.019 50.000 0.00 0.00 0.00 5.24
79 80 1.653151 GAAAGACCCTCCATACACGC 58.347 55.000 0.00 0.00 0.00 5.34
80 81 2.311124 GGAAAGACCCTCCATACACG 57.689 55.000 0.00 0.00 32.77 4.49
91 92 1.871126 GCTGCAGCAAGGGAAAGACC 61.871 60.000 33.36 0.00 41.59 3.85
92 93 1.583477 GCTGCAGCAAGGGAAAGAC 59.417 57.895 33.36 0.00 41.59 3.01
93 94 1.968017 CGCTGCAGCAAGGGAAAGA 60.968 57.895 36.03 0.00 42.21 2.52
94 95 1.518056 TTCGCTGCAGCAAGGGAAAG 61.518 55.000 36.03 18.39 43.67 2.62
95 96 1.518056 CTTCGCTGCAGCAAGGGAAA 61.518 55.000 36.03 18.40 45.24 3.13
96 97 1.968017 CTTCGCTGCAGCAAGGGAA 60.968 57.895 36.03 27.53 44.20 3.97
97 98 2.359107 CTTCGCTGCAGCAAGGGA 60.359 61.111 36.03 22.89 42.21 4.20
98 99 2.670934 ACTTCGCTGCAGCAAGGG 60.671 61.111 33.93 25.22 42.21 3.95
99 100 1.509644 TTCACTTCGCTGCAGCAAGG 61.510 55.000 33.93 25.11 42.21 3.61
100 101 0.385223 GTTCACTTCGCTGCAGCAAG 60.385 55.000 36.03 33.38 42.21 4.01
101 102 0.815213 AGTTCACTTCGCTGCAGCAA 60.815 50.000 36.03 26.11 42.21 3.91
102 103 1.227645 AGTTCACTTCGCTGCAGCA 60.228 52.632 36.03 21.33 42.21 4.41
103 104 1.206072 CAGTTCACTTCGCTGCAGC 59.794 57.895 29.12 29.12 37.78 5.25
107 108 0.877071 ATTGGCAGTTCACTTCGCTG 59.123 50.000 0.00 0.00 0.00 5.18
108 109 1.267806 CAATTGGCAGTTCACTTCGCT 59.732 47.619 0.00 0.00 0.00 4.93
109 110 1.689959 CAATTGGCAGTTCACTTCGC 58.310 50.000 0.00 0.00 0.00 4.70
110 111 1.689959 GCAATTGGCAGTTCACTTCG 58.310 50.000 7.72 0.00 43.97 3.79
123 124 5.047519 AGAGAATCCAACTCCAAAGCAATTG 60.048 40.000 0.00 0.00 35.40 2.32
124 125 5.082425 AGAGAATCCAACTCCAAAGCAATT 58.918 37.500 0.00 0.00 35.27 2.32
125 126 4.670765 AGAGAATCCAACTCCAAAGCAAT 58.329 39.130 0.00 0.00 35.27 3.56
126 127 4.074970 GAGAGAATCCAACTCCAAAGCAA 58.925 43.478 0.00 0.00 35.27 3.91
127 128 3.679389 GAGAGAATCCAACTCCAAAGCA 58.321 45.455 0.00 0.00 35.27 3.91
128 129 2.675348 CGAGAGAATCCAACTCCAAAGC 59.325 50.000 0.00 0.00 35.27 3.51
129 130 4.193826 TCGAGAGAATCCAACTCCAAAG 57.806 45.455 0.00 0.00 37.03 2.77
130 131 4.617253 TTCGAGAGAATCCAACTCCAAA 57.383 40.909 0.00 0.00 46.92 3.28
143 144 0.250793 AGAGAGACCGCTTCGAGAGA 59.749 55.000 0.00 0.00 39.20 3.10
144 145 0.655733 GAGAGAGACCGCTTCGAGAG 59.344 60.000 0.00 0.00 0.00 3.20
145 146 0.036294 TGAGAGAGACCGCTTCGAGA 60.036 55.000 0.00 0.00 0.00 4.04
146 147 1.021202 ATGAGAGAGACCGCTTCGAG 58.979 55.000 0.00 0.00 0.00 4.04
147 148 2.327200 TATGAGAGAGACCGCTTCGA 57.673 50.000 0.00 0.00 0.00 3.71
148 149 2.550180 TGATATGAGAGAGACCGCTTCG 59.450 50.000 0.00 0.00 0.00 3.79
149 150 4.545610 CTTGATATGAGAGAGACCGCTTC 58.454 47.826 0.00 0.00 0.00 3.86
150 151 3.243704 GCTTGATATGAGAGAGACCGCTT 60.244 47.826 0.00 0.00 0.00 4.68
151 152 2.295909 GCTTGATATGAGAGAGACCGCT 59.704 50.000 0.00 0.00 0.00 5.52
152 153 2.295909 AGCTTGATATGAGAGAGACCGC 59.704 50.000 0.00 0.00 0.00 5.68
153 154 3.364864 CGAGCTTGATATGAGAGAGACCG 60.365 52.174 0.00 0.00 0.00 4.79
154 155 3.057596 CCGAGCTTGATATGAGAGAGACC 60.058 52.174 1.22 0.00 0.00 3.85
155 156 3.818210 TCCGAGCTTGATATGAGAGAGAC 59.182 47.826 1.22 0.00 0.00 3.36
156 157 3.818210 GTCCGAGCTTGATATGAGAGAGA 59.182 47.826 1.22 0.00 0.00 3.10
157 158 3.567585 TGTCCGAGCTTGATATGAGAGAG 59.432 47.826 1.22 0.00 0.00 3.20
158 159 3.316588 GTGTCCGAGCTTGATATGAGAGA 59.683 47.826 1.22 0.00 0.00 3.10
159 160 3.317711 AGTGTCCGAGCTTGATATGAGAG 59.682 47.826 1.22 0.00 0.00 3.20
160 161 3.067320 CAGTGTCCGAGCTTGATATGAGA 59.933 47.826 1.22 0.00 0.00 3.27
161 162 3.067320 TCAGTGTCCGAGCTTGATATGAG 59.933 47.826 1.22 0.00 0.00 2.90
162 163 3.023832 TCAGTGTCCGAGCTTGATATGA 58.976 45.455 1.22 0.00 0.00 2.15
163 164 3.443099 TCAGTGTCCGAGCTTGATATG 57.557 47.619 1.22 0.00 0.00 1.78
164 165 3.304996 CGATCAGTGTCCGAGCTTGATAT 60.305 47.826 1.22 0.00 0.00 1.63
165 166 2.033424 CGATCAGTGTCCGAGCTTGATA 59.967 50.000 1.22 0.00 0.00 2.15
166 167 1.202348 CGATCAGTGTCCGAGCTTGAT 60.202 52.381 1.22 0.00 0.00 2.57
167 168 0.171231 CGATCAGTGTCCGAGCTTGA 59.829 55.000 1.22 0.00 0.00 3.02
168 169 0.109086 ACGATCAGTGTCCGAGCTTG 60.109 55.000 12.35 0.00 0.00 4.01
169 170 0.603569 AACGATCAGTGTCCGAGCTT 59.396 50.000 12.35 0.00 0.00 3.74
170 171 0.171455 GAACGATCAGTGTCCGAGCT 59.829 55.000 12.35 0.00 0.00 4.09
171 172 0.171455 AGAACGATCAGTGTCCGAGC 59.829 55.000 12.35 5.33 0.00 5.03
172 173 1.200252 ACAGAACGATCAGTGTCCGAG 59.800 52.381 12.35 4.08 0.00 4.63
173 174 1.244816 ACAGAACGATCAGTGTCCGA 58.755 50.000 12.35 0.00 0.00 4.55
174 175 2.065993 AACAGAACGATCAGTGTCCG 57.934 50.000 0.00 5.61 0.00 4.79
175 176 4.557205 AGTAAACAGAACGATCAGTGTCC 58.443 43.478 0.00 0.00 0.00 4.02
176 177 5.462405 AGAGTAAACAGAACGATCAGTGTC 58.538 41.667 0.00 0.00 0.00 3.67
177 178 5.455056 AGAGTAAACAGAACGATCAGTGT 57.545 39.130 0.00 0.00 0.00 3.55
178 179 5.920840 TGAAGAGTAAACAGAACGATCAGTG 59.079 40.000 0.00 0.00 0.00 3.66
179 180 5.921408 GTGAAGAGTAAACAGAACGATCAGT 59.079 40.000 0.00 0.00 0.00 3.41
180 181 6.153067 AGTGAAGAGTAAACAGAACGATCAG 58.847 40.000 0.00 0.00 0.00 2.90
181 182 6.085555 AGTGAAGAGTAAACAGAACGATCA 57.914 37.500 0.00 0.00 0.00 2.92
182 183 7.409465 AAAGTGAAGAGTAAACAGAACGATC 57.591 36.000 0.00 0.00 0.00 3.69
183 184 7.787725 AAAAGTGAAGAGTAAACAGAACGAT 57.212 32.000 0.00 0.00 0.00 3.73
184 185 7.605410 AAAAAGTGAAGAGTAAACAGAACGA 57.395 32.000 0.00 0.00 0.00 3.85
185 186 8.814235 TCTAAAAAGTGAAGAGTAAACAGAACG 58.186 33.333 0.00 0.00 0.00 3.95
188 189 9.751542 CTCTCTAAAAAGTGAAGAGTAAACAGA 57.248 33.333 0.00 0.00 38.32 3.41
189 190 9.751542 TCTCTCTAAAAAGTGAAGAGTAAACAG 57.248 33.333 0.00 0.00 38.32 3.16
195 196 9.936759 CCTTAATCTCTCTAAAAAGTGAAGAGT 57.063 33.333 0.00 0.00 38.32 3.24
196 197 8.878769 GCCTTAATCTCTCTAAAAAGTGAAGAG 58.121 37.037 0.00 0.00 38.48 2.85
197 198 8.598041 AGCCTTAATCTCTCTAAAAAGTGAAGA 58.402 33.333 0.00 0.00 0.00 2.87
198 199 8.663911 CAGCCTTAATCTCTCTAAAAAGTGAAG 58.336 37.037 0.00 0.00 0.00 3.02
199 200 8.157476 ACAGCCTTAATCTCTCTAAAAAGTGAA 58.843 33.333 0.00 0.00 0.00 3.18
200 201 7.604164 CACAGCCTTAATCTCTCTAAAAAGTGA 59.396 37.037 0.00 0.00 0.00 3.41
201 202 7.389053 ACACAGCCTTAATCTCTCTAAAAAGTG 59.611 37.037 0.00 0.00 0.00 3.16
202 203 7.454225 ACACAGCCTTAATCTCTCTAAAAAGT 58.546 34.615 0.00 0.00 0.00 2.66
203 204 7.913674 ACACAGCCTTAATCTCTCTAAAAAG 57.086 36.000 0.00 0.00 0.00 2.27
204 205 7.117812 CGAACACAGCCTTAATCTCTCTAAAAA 59.882 37.037 0.00 0.00 0.00 1.94
205 206 6.590292 CGAACACAGCCTTAATCTCTCTAAAA 59.410 38.462 0.00 0.00 0.00 1.52
206 207 6.100004 CGAACACAGCCTTAATCTCTCTAAA 58.900 40.000 0.00 0.00 0.00 1.85
207 208 5.394224 CCGAACACAGCCTTAATCTCTCTAA 60.394 44.000 0.00 0.00 0.00 2.10
208 209 4.098044 CCGAACACAGCCTTAATCTCTCTA 59.902 45.833 0.00 0.00 0.00 2.43
209 210 3.118956 CCGAACACAGCCTTAATCTCTCT 60.119 47.826 0.00 0.00 0.00 3.10
210 211 3.190874 CCGAACACAGCCTTAATCTCTC 58.809 50.000 0.00 0.00 0.00 3.20
211 212 2.093447 CCCGAACACAGCCTTAATCTCT 60.093 50.000 0.00 0.00 0.00 3.10
212 213 2.093658 TCCCGAACACAGCCTTAATCTC 60.094 50.000 0.00 0.00 0.00 2.75
213 214 1.906574 TCCCGAACACAGCCTTAATCT 59.093 47.619 0.00 0.00 0.00 2.40
214 215 2.396590 TCCCGAACACAGCCTTAATC 57.603 50.000 0.00 0.00 0.00 1.75
215 216 2.871096 TTCCCGAACACAGCCTTAAT 57.129 45.000 0.00 0.00 0.00 1.40
216 217 2.617021 GGATTCCCGAACACAGCCTTAA 60.617 50.000 0.00 0.00 0.00 1.85
217 218 1.065709 GGATTCCCGAACACAGCCTTA 60.066 52.381 0.00 0.00 0.00 2.69
218 219 0.322546 GGATTCCCGAACACAGCCTT 60.323 55.000 0.00 0.00 0.00 4.35
219 220 1.201429 AGGATTCCCGAACACAGCCT 61.201 55.000 0.00 0.00 37.58 4.58
220 221 0.744771 GAGGATTCCCGAACACAGCC 60.745 60.000 0.00 0.00 37.58 4.85
221 222 0.250513 AGAGGATTCCCGAACACAGC 59.749 55.000 0.00 0.00 37.58 4.40
222 223 2.009042 GCAGAGGATTCCCGAACACAG 61.009 57.143 0.00 0.00 37.58 3.66
223 224 0.036388 GCAGAGGATTCCCGAACACA 60.036 55.000 0.00 0.00 37.58 3.72
224 225 0.250513 AGCAGAGGATTCCCGAACAC 59.749 55.000 0.00 0.00 37.58 3.32
225 226 0.537188 GAGCAGAGGATTCCCGAACA 59.463 55.000 0.00 0.00 37.58 3.18
226 227 0.179070 GGAGCAGAGGATTCCCGAAC 60.179 60.000 0.00 0.00 37.58 3.95
227 228 0.325671 AGGAGCAGAGGATTCCCGAA 60.326 55.000 0.00 0.00 37.58 4.30
228 229 0.757188 GAGGAGCAGAGGATTCCCGA 60.757 60.000 0.00 0.00 37.58 5.14
229 230 1.745264 GAGGAGCAGAGGATTCCCG 59.255 63.158 0.00 0.00 37.58 5.14
230 231 1.753368 CGGAGGAGCAGAGGATTCCC 61.753 65.000 0.00 0.00 0.00 3.97
231 232 1.745264 CGGAGGAGCAGAGGATTCC 59.255 63.158 0.00 0.00 0.00 3.01
232 233 1.068921 GCGGAGGAGCAGAGGATTC 59.931 63.158 0.00 0.00 37.05 2.52
233 234 2.439104 GGCGGAGGAGCAGAGGATT 61.439 63.158 0.00 0.00 39.27 3.01
234 235 2.841988 GGCGGAGGAGCAGAGGAT 60.842 66.667 0.00 0.00 39.27 3.24
235 236 4.382541 TGGCGGAGGAGCAGAGGA 62.383 66.667 0.00 0.00 39.27 3.71
236 237 3.847602 CTGGCGGAGGAGCAGAGG 61.848 72.222 0.00 0.00 39.27 3.69
237 238 3.847602 CCTGGCGGAGGAGCAGAG 61.848 72.222 0.00 0.00 46.33 3.35
282 283 1.130561 AGTTCAATTTTAGCGAGCGGC 59.869 47.619 0.00 0.00 44.05 6.53
283 284 2.476185 CCAGTTCAATTTTAGCGAGCGG 60.476 50.000 0.00 0.00 0.00 5.52
284 285 2.159627 ACCAGTTCAATTTTAGCGAGCG 59.840 45.455 0.00 0.00 0.00 5.03
285 286 3.831715 ACCAGTTCAATTTTAGCGAGC 57.168 42.857 0.00 0.00 0.00 5.03
286 287 3.914364 GCAACCAGTTCAATTTTAGCGAG 59.086 43.478 0.00 0.00 0.00 5.03
287 288 3.305064 GGCAACCAGTTCAATTTTAGCGA 60.305 43.478 0.00 0.00 0.00 4.93
288 289 2.986479 GGCAACCAGTTCAATTTTAGCG 59.014 45.455 0.00 0.00 0.00 4.26
289 290 2.986479 CGGCAACCAGTTCAATTTTAGC 59.014 45.455 0.00 0.00 0.00 3.09
290 291 2.986479 GCGGCAACCAGTTCAATTTTAG 59.014 45.455 0.00 0.00 0.00 1.85
291 292 2.625790 AGCGGCAACCAGTTCAATTTTA 59.374 40.909 1.45 0.00 0.00 1.52
292 293 1.412343 AGCGGCAACCAGTTCAATTTT 59.588 42.857 1.45 0.00 0.00 1.82
293 294 1.000274 GAGCGGCAACCAGTTCAATTT 60.000 47.619 1.45 0.00 0.00 1.82
294 295 0.598065 GAGCGGCAACCAGTTCAATT 59.402 50.000 1.45 0.00 0.00 2.32
295 296 1.244019 GGAGCGGCAACCAGTTCAAT 61.244 55.000 1.45 0.00 0.00 2.57
296 297 1.896660 GGAGCGGCAACCAGTTCAA 60.897 57.895 1.45 0.00 0.00 2.69
297 298 2.281484 GGAGCGGCAACCAGTTCA 60.281 61.111 1.45 0.00 0.00 3.18
298 299 3.423154 CGGAGCGGCAACCAGTTC 61.423 66.667 14.51 0.00 0.00 3.01
319 320 2.579787 CTCTGTAACTCCGCCGCG 60.580 66.667 5.59 5.59 0.00 6.46
320 321 2.886124 GCTCTGTAACTCCGCCGC 60.886 66.667 0.00 0.00 0.00 6.53
321 322 1.517257 CTGCTCTGTAACTCCGCCG 60.517 63.158 0.00 0.00 0.00 6.46
322 323 0.179124 CTCTGCTCTGTAACTCCGCC 60.179 60.000 0.00 0.00 0.00 6.13
323 324 0.528470 ACTCTGCTCTGTAACTCCGC 59.472 55.000 0.00 0.00 0.00 5.54
324 325 1.813178 TCACTCTGCTCTGTAACTCCG 59.187 52.381 0.00 0.00 0.00 4.63
325 326 4.429108 GAATCACTCTGCTCTGTAACTCC 58.571 47.826 0.00 0.00 0.00 3.85
326 327 4.429108 GGAATCACTCTGCTCTGTAACTC 58.571 47.826 0.00 0.00 0.00 3.01
327 328 3.119316 CGGAATCACTCTGCTCTGTAACT 60.119 47.826 0.00 0.00 0.00 2.24
328 329 3.119459 TCGGAATCACTCTGCTCTGTAAC 60.119 47.826 0.00 0.00 0.00 2.50
329 330 3.089284 TCGGAATCACTCTGCTCTGTAA 58.911 45.455 0.00 0.00 0.00 2.41
330 331 2.723273 TCGGAATCACTCTGCTCTGTA 58.277 47.619 0.00 0.00 0.00 2.74
331 332 1.550327 TCGGAATCACTCTGCTCTGT 58.450 50.000 0.00 0.00 0.00 3.41
332 333 2.266554 GTTCGGAATCACTCTGCTCTG 58.733 52.381 0.00 0.00 0.00 3.35
333 334 1.135257 CGTTCGGAATCACTCTGCTCT 60.135 52.381 0.00 0.00 0.00 4.09
334 335 1.272781 CGTTCGGAATCACTCTGCTC 58.727 55.000 0.00 0.00 0.00 4.26
335 336 0.108615 CCGTTCGGAATCACTCTGCT 60.109 55.000 5.19 0.00 0.00 4.24
336 337 1.696832 GCCGTTCGGAATCACTCTGC 61.697 60.000 15.69 0.00 0.00 4.26
337 338 1.084370 GGCCGTTCGGAATCACTCTG 61.084 60.000 15.69 0.00 0.00 3.35
338 339 1.218316 GGCCGTTCGGAATCACTCT 59.782 57.895 15.69 0.00 0.00 3.24
339 340 1.814169 GGGCCGTTCGGAATCACTC 60.814 63.158 15.69 0.00 0.00 3.51
340 341 2.267961 GGGCCGTTCGGAATCACT 59.732 61.111 15.69 0.00 0.00 3.41
341 342 1.963464 TAGGGGCCGTTCGGAATCAC 61.963 60.000 15.69 4.82 0.00 3.06
342 343 1.266160 TTAGGGGCCGTTCGGAATCA 61.266 55.000 15.69 0.00 0.00 2.57
343 344 0.532196 CTTAGGGGCCGTTCGGAATC 60.532 60.000 15.69 3.63 0.00 2.52
344 345 1.269703 ACTTAGGGGCCGTTCGGAAT 61.270 55.000 15.69 0.00 0.00 3.01
345 346 0.614415 TACTTAGGGGCCGTTCGGAA 60.614 55.000 15.69 0.00 0.00 4.30
346 347 1.000233 TACTTAGGGGCCGTTCGGA 60.000 57.895 15.69 0.00 0.00 4.55
347 348 1.142531 GTACTTAGGGGCCGTTCGG 59.857 63.158 3.09 6.90 0.00 4.30
348 349 0.533951 AAGTACTTAGGGGCCGTTCG 59.466 55.000 6.26 0.00 0.00 3.95
349 350 3.893326 TTAAGTACTTAGGGGCCGTTC 57.107 47.619 14.73 0.00 0.00 3.95
350 351 3.118149 CCATTAAGTACTTAGGGGCCGTT 60.118 47.826 20.06 0.00 0.00 4.44
351 352 2.436911 CCATTAAGTACTTAGGGGCCGT 59.563 50.000 20.06 3.37 0.00 5.68
352 353 2.224450 CCCATTAAGTACTTAGGGGCCG 60.224 54.545 27.96 14.41 35.86 6.13
353 354 2.781757 ACCCATTAAGTACTTAGGGGCC 59.218 50.000 33.44 0.00 41.41 5.80
354 355 4.515028 AACCCATTAAGTACTTAGGGGC 57.485 45.455 33.44 0.00 41.41 5.80
355 356 5.587443 CGAAAACCCATTAAGTACTTAGGGG 59.413 44.000 32.64 32.64 42.44 4.79
356 357 5.587443 CCGAAAACCCATTAAGTACTTAGGG 59.413 44.000 27.14 27.14 36.87 3.53
357 358 6.408869 TCCGAAAACCCATTAAGTACTTAGG 58.591 40.000 14.73 14.75 0.00 2.69
358 359 7.910441 TTCCGAAAACCCATTAAGTACTTAG 57.090 36.000 14.73 6.73 0.00 2.18
359 360 8.567104 GTTTTCCGAAAACCCATTAAGTACTTA 58.433 33.333 21.41 11.38 43.78 2.24
360 361 7.428020 GTTTTCCGAAAACCCATTAAGTACTT 58.572 34.615 21.41 13.68 43.78 2.24
361 362 6.973843 GTTTTCCGAAAACCCATTAAGTACT 58.026 36.000 21.41 0.00 43.78 2.73
376 377 8.600625 CGATATGAGAAATACAAGTTTTCCGAA 58.399 33.333 0.00 0.00 34.34 4.30
377 378 7.254319 GCGATATGAGAAATACAAGTTTTCCGA 60.254 37.037 0.00 0.00 34.34 4.55
378 379 6.846283 GCGATATGAGAAATACAAGTTTTCCG 59.154 38.462 0.00 0.00 34.34 4.30
379 380 7.920738 AGCGATATGAGAAATACAAGTTTTCC 58.079 34.615 0.00 0.00 34.34 3.13
381 382 9.817809 TCTAGCGATATGAGAAATACAAGTTTT 57.182 29.630 0.00 0.00 0.00 2.43
382 383 9.817809 TTCTAGCGATATGAGAAATACAAGTTT 57.182 29.630 0.00 0.00 0.00 2.66
383 384 9.250624 GTTCTAGCGATATGAGAAATACAAGTT 57.749 33.333 0.00 0.00 31.26 2.66
384 385 8.634444 AGTTCTAGCGATATGAGAAATACAAGT 58.366 33.333 0.00 0.00 31.26 3.16
385 386 9.469807 AAGTTCTAGCGATATGAGAAATACAAG 57.530 33.333 0.00 0.00 31.26 3.16
399 400 9.819267 ACTAGCTTTATTTTAAGTTCTAGCGAT 57.181 29.630 0.00 0.00 32.89 4.58
400 401 9.084164 CACTAGCTTTATTTTAAGTTCTAGCGA 57.916 33.333 0.00 0.00 32.89 4.93
401 402 9.084164 TCACTAGCTTTATTTTAAGTTCTAGCG 57.916 33.333 0.00 0.00 32.89 4.26
420 421 8.162355 AGCAAAACTAGCTAAGCTATCACTAGC 61.162 40.741 6.29 6.29 44.57 3.42
421 422 7.206687 AGCAAAACTAGCTAAGCTATCACTAG 58.793 38.462 10.02 10.02 40.54 2.57
422 423 7.113658 AGCAAAACTAGCTAAGCTATCACTA 57.886 36.000 0.00 0.00 40.54 2.74
423 424 5.983540 AGCAAAACTAGCTAAGCTATCACT 58.016 37.500 0.00 0.00 40.54 3.41
424 425 7.203910 TCTAGCAAAACTAGCTAAGCTATCAC 58.796 38.462 7.68 0.00 46.93 3.06
425 426 7.348080 TCTAGCAAAACTAGCTAAGCTATCA 57.652 36.000 7.68 0.00 46.93 2.15
426 427 7.170151 GGTTCTAGCAAAACTAGCTAAGCTATC 59.830 40.741 7.68 3.72 46.93 2.08
427 428 6.987404 GGTTCTAGCAAAACTAGCTAAGCTAT 59.013 38.462 7.68 0.00 46.93 2.97
428 429 6.154706 AGGTTCTAGCAAAACTAGCTAAGCTA 59.845 38.462 0.00 3.55 46.93 3.32
429 430 5.046231 AGGTTCTAGCAAAACTAGCTAAGCT 60.046 40.000 0.00 2.54 46.93 3.74
430 431 5.179533 AGGTTCTAGCAAAACTAGCTAAGC 58.820 41.667 0.00 0.00 46.93 3.09
431 432 7.492994 CCTTAGGTTCTAGCAAAACTAGCTAAG 59.507 40.741 0.00 0.00 46.93 2.18
432 433 7.038516 ACCTTAGGTTCTAGCAAAACTAGCTAA 60.039 37.037 0.00 0.00 46.93 3.09
433 434 6.439692 ACCTTAGGTTCTAGCAAAACTAGCTA 59.560 38.462 0.00 0.00 46.93 3.32
434 435 5.248705 ACCTTAGGTTCTAGCAAAACTAGCT 59.751 40.000 0.00 0.00 46.93 3.32
435 436 5.489249 ACCTTAGGTTCTAGCAAAACTAGC 58.511 41.667 0.00 0.00 46.93 3.42
436 437 7.123847 TCCTACCTTAGGTTCTAGCAAAACTAG 59.876 40.741 10.01 0.00 46.26 2.57
437 438 6.955851 TCCTACCTTAGGTTCTAGCAAAACTA 59.044 38.462 10.01 0.00 46.32 2.24
438 439 5.783875 TCCTACCTTAGGTTCTAGCAAAACT 59.216 40.000 10.01 0.00 46.32 2.66
439 440 5.873712 GTCCTACCTTAGGTTCTAGCAAAAC 59.126 44.000 10.01 0.00 46.32 2.43
440 441 5.046087 GGTCCTACCTTAGGTTCTAGCAAAA 60.046 44.000 10.01 0.00 46.32 2.44
441 442 4.468868 GGTCCTACCTTAGGTTCTAGCAAA 59.531 45.833 10.01 0.00 46.32 3.68
442 443 4.028825 GGTCCTACCTTAGGTTCTAGCAA 58.971 47.826 10.01 0.00 46.32 3.91
443 444 3.012047 TGGTCCTACCTTAGGTTCTAGCA 59.988 47.826 10.01 8.19 46.32 3.49
444 445 3.637694 CTGGTCCTACCTTAGGTTCTAGC 59.362 52.174 10.01 5.57 46.32 3.42
445 446 4.079327 TCCTGGTCCTACCTTAGGTTCTAG 60.079 50.000 10.01 0.26 46.32 2.43
446 447 3.860470 TCCTGGTCCTACCTTAGGTTCTA 59.140 47.826 10.01 0.00 46.32 2.10
447 448 2.658489 TCCTGGTCCTACCTTAGGTTCT 59.342 50.000 10.01 0.00 46.32 3.01
448 449 2.765135 GTCCTGGTCCTACCTTAGGTTC 59.235 54.545 10.01 0.00 46.32 3.62
449 450 2.386113 AGTCCTGGTCCTACCTTAGGTT 59.614 50.000 10.01 0.00 46.32 3.50
450 451 2.009165 AGTCCTGGTCCTACCTTAGGT 58.991 52.381 9.57 9.57 46.32 3.08
451 452 4.451760 CCAAGTCCTGGTCCTACCTTAGG 61.452 56.522 0.00 0.00 41.04 2.69
452 453 2.766828 CCAAGTCCTGGTCCTACCTTAG 59.233 54.545 0.00 0.00 40.78 2.18
453 454 2.829023 CCAAGTCCTGGTCCTACCTTA 58.171 52.381 0.00 0.00 40.78 2.69
454 455 1.657804 CCAAGTCCTGGTCCTACCTT 58.342 55.000 0.00 0.00 40.78 3.50
455 456 3.401032 CCAAGTCCTGGTCCTACCT 57.599 57.895 0.00 0.00 40.78 3.08
464 465 1.065854 CCAGCTCCTAACCAAGTCCTG 60.066 57.143 0.00 0.00 0.00 3.86
465 466 1.280457 CCAGCTCCTAACCAAGTCCT 58.720 55.000 0.00 0.00 0.00 3.85
466 467 0.984995 ACCAGCTCCTAACCAAGTCC 59.015 55.000 0.00 0.00 0.00 3.85
467 468 1.066071 GGACCAGCTCCTAACCAAGTC 60.066 57.143 0.00 0.00 35.89 3.01
468 469 0.984995 GGACCAGCTCCTAACCAAGT 59.015 55.000 0.00 0.00 35.89 3.16
469 470 0.984230 TGGACCAGCTCCTAACCAAG 59.016 55.000 0.00 0.00 40.26 3.61
470 471 0.984230 CTGGACCAGCTCCTAACCAA 59.016 55.000 8.99 0.00 40.26 3.67
471 472 0.178903 ACTGGACCAGCTCCTAACCA 60.179 55.000 21.95 0.00 40.26 3.67
472 473 0.537653 GACTGGACCAGCTCCTAACC 59.462 60.000 21.95 0.00 40.26 2.85
473 474 0.173708 CGACTGGACCAGCTCCTAAC 59.826 60.000 21.95 3.90 40.26 2.34
474 475 0.039180 TCGACTGGACCAGCTCCTAA 59.961 55.000 21.95 0.00 40.26 2.69
475 476 0.039180 TTCGACTGGACCAGCTCCTA 59.961 55.000 21.95 5.73 40.26 2.94
476 477 1.228894 TTCGACTGGACCAGCTCCT 60.229 57.895 21.95 1.10 40.26 3.69
477 478 1.216710 CTTCGACTGGACCAGCTCC 59.783 63.158 21.95 9.93 39.97 4.70
478 479 1.133407 CTACTTCGACTGGACCAGCTC 59.867 57.143 21.95 15.92 34.37 4.09
479 480 1.178276 CTACTTCGACTGGACCAGCT 58.822 55.000 21.95 8.80 34.37 4.24
480 481 0.889306 ACTACTTCGACTGGACCAGC 59.111 55.000 21.95 12.97 34.37 4.85
481 482 1.202582 CCACTACTTCGACTGGACCAG 59.797 57.143 20.45 20.45 37.52 4.00
482 483 1.202964 TCCACTACTTCGACTGGACCA 60.203 52.381 0.00 0.00 0.00 4.02
483 484 1.473278 CTCCACTACTTCGACTGGACC 59.527 57.143 0.00 0.00 0.00 4.46
484 485 2.434428 TCTCCACTACTTCGACTGGAC 58.566 52.381 0.00 0.00 0.00 4.02
485 486 2.873094 TCTCCACTACTTCGACTGGA 57.127 50.000 0.00 0.00 0.00 3.86
486 487 3.003897 GCTATCTCCACTACTTCGACTGG 59.996 52.174 0.00 0.00 0.00 4.00
487 488 3.628032 TGCTATCTCCACTACTTCGACTG 59.372 47.826 0.00 0.00 0.00 3.51
488 489 3.887352 TGCTATCTCCACTACTTCGACT 58.113 45.455 0.00 0.00 0.00 4.18
489 490 4.611807 CGATGCTATCTCCACTACTTCGAC 60.612 50.000 0.00 0.00 0.00 4.20
490 491 3.498777 CGATGCTATCTCCACTACTTCGA 59.501 47.826 0.00 0.00 0.00 3.71
491 492 3.498777 TCGATGCTATCTCCACTACTTCG 59.501 47.826 0.00 0.00 0.00 3.79
492 493 5.440234 TTCGATGCTATCTCCACTACTTC 57.560 43.478 0.00 0.00 0.00 3.01
493 494 5.536538 TCATTCGATGCTATCTCCACTACTT 59.463 40.000 0.00 0.00 0.00 2.24
494 495 5.073428 TCATTCGATGCTATCTCCACTACT 58.927 41.667 0.00 0.00 0.00 2.57
495 496 5.378292 TCATTCGATGCTATCTCCACTAC 57.622 43.478 0.00 0.00 0.00 2.73
496 497 6.015095 ACAATCATTCGATGCTATCTCCACTA 60.015 38.462 0.00 0.00 30.13 2.74
497 498 5.221601 ACAATCATTCGATGCTATCTCCACT 60.222 40.000 0.00 0.00 30.13 4.00
498 499 4.993584 ACAATCATTCGATGCTATCTCCAC 59.006 41.667 0.00 0.00 30.13 4.02
499 500 5.219343 ACAATCATTCGATGCTATCTCCA 57.781 39.130 0.00 0.00 30.13 3.86
500 501 7.600375 TCTTTACAATCATTCGATGCTATCTCC 59.400 37.037 0.00 0.00 30.13 3.71
501 502 8.526218 TCTTTACAATCATTCGATGCTATCTC 57.474 34.615 0.00 0.00 30.13 2.75
502 503 8.933807 CATCTTTACAATCATTCGATGCTATCT 58.066 33.333 0.00 0.00 30.13 1.98
503 504 8.715998 ACATCTTTACAATCATTCGATGCTATC 58.284 33.333 0.00 0.00 32.28 2.08
504 505 8.613060 ACATCTTTACAATCATTCGATGCTAT 57.387 30.769 0.00 0.00 32.28 2.97
505 506 8.337532 CAACATCTTTACAATCATTCGATGCTA 58.662 33.333 0.00 0.00 32.28 3.49
506 507 6.932356 ACATCTTTACAATCATTCGATGCT 57.068 33.333 0.00 0.00 32.28 3.79
507 508 6.968904 ACAACATCTTTACAATCATTCGATGC 59.031 34.615 0.00 0.00 32.28 3.91
508 509 8.177013 TCACAACATCTTTACAATCATTCGATG 58.823 33.333 0.00 0.00 34.52 3.84
509 510 8.267620 TCACAACATCTTTACAATCATTCGAT 57.732 30.769 0.00 0.00 0.00 3.59
510 511 7.665561 TCACAACATCTTTACAATCATTCGA 57.334 32.000 0.00 0.00 0.00 3.71
511 512 8.791605 CAATCACAACATCTTTACAATCATTCG 58.208 33.333 0.00 0.00 0.00 3.34
512 513 9.844790 TCAATCACAACATCTTTACAATCATTC 57.155 29.630 0.00 0.00 0.00 2.67
513 514 9.850628 CTCAATCACAACATCTTTACAATCATT 57.149 29.630 0.00 0.00 0.00 2.57
514 515 9.017509 ACTCAATCACAACATCTTTACAATCAT 57.982 29.630 0.00 0.00 0.00 2.45
515 516 8.394971 ACTCAATCACAACATCTTTACAATCA 57.605 30.769 0.00 0.00 0.00 2.57
524 525 8.400947 GCATTGTATTACTCAATCACAACATCT 58.599 33.333 0.00 0.00 33.92 2.90
525 526 8.400947 AGCATTGTATTACTCAATCACAACATC 58.599 33.333 0.00 0.00 33.92 3.06
526 527 8.284945 AGCATTGTATTACTCAATCACAACAT 57.715 30.769 0.00 0.00 33.92 2.71
527 528 7.686438 AGCATTGTATTACTCAATCACAACA 57.314 32.000 0.00 0.00 33.92 3.33
531 532 9.884465 GGAAATAGCATTGTATTACTCAATCAC 57.116 33.333 0.00 0.00 33.92 3.06
532 533 9.066892 GGGAAATAGCATTGTATTACTCAATCA 57.933 33.333 0.00 0.00 33.92 2.57
533 534 8.515414 GGGGAAATAGCATTGTATTACTCAATC 58.485 37.037 0.00 0.00 33.92 2.67
534 535 7.174946 CGGGGAAATAGCATTGTATTACTCAAT 59.825 37.037 0.00 0.00 36.16 2.57
535 536 6.485313 CGGGGAAATAGCATTGTATTACTCAA 59.515 38.462 0.00 0.00 0.00 3.02
536 537 5.995282 CGGGGAAATAGCATTGTATTACTCA 59.005 40.000 0.00 0.00 0.00 3.41
537 538 5.411669 CCGGGGAAATAGCATTGTATTACTC 59.588 44.000 0.00 0.00 0.00 2.59
538 539 5.313712 CCGGGGAAATAGCATTGTATTACT 58.686 41.667 0.00 0.00 0.00 2.24
539 540 4.457949 CCCGGGGAAATAGCATTGTATTAC 59.542 45.833 14.71 0.00 0.00 1.89
540 541 4.351407 TCCCGGGGAAATAGCATTGTATTA 59.649 41.667 23.50 0.00 0.00 0.98
541 542 3.139397 TCCCGGGGAAATAGCATTGTATT 59.861 43.478 23.50 0.00 0.00 1.89
542 543 2.714250 TCCCGGGGAAATAGCATTGTAT 59.286 45.455 23.50 0.00 0.00 2.29
543 544 2.128535 TCCCGGGGAAATAGCATTGTA 58.871 47.619 23.50 0.00 0.00 2.41
544 545 0.923358 TCCCGGGGAAATAGCATTGT 59.077 50.000 23.50 0.00 0.00 2.71
545 546 2.065899 TTCCCGGGGAAATAGCATTG 57.934 50.000 26.10 0.00 38.93 2.82
546 547 2.838637 TTTCCCGGGGAAATAGCATT 57.161 45.000 32.46 0.00 45.42 3.56
566 567 1.104577 ACCGCGGTGTGGACATTTTT 61.105 50.000 33.75 0.00 36.58 1.94
567 568 1.512156 GACCGCGGTGTGGACATTTT 61.512 55.000 39.65 5.66 36.58 1.82
583 584 1.228245 TGAACTGGCTTGGCTGACC 60.228 57.895 7.94 0.00 0.00 4.02
614 618 1.340017 GCTGCCTCCATTGACTGGTAA 60.340 52.381 0.00 0.00 46.08 2.85
653 664 1.375098 CGTGTACTCCTCCGACCTCC 61.375 65.000 0.00 0.00 0.00 4.30
706 717 0.692476 ATGCTCACCAGTAACCAGCA 59.308 50.000 0.00 0.00 43.96 4.41
707 718 2.691409 TATGCTCACCAGTAACCAGC 57.309 50.000 0.00 0.00 0.00 4.85
708 719 4.406648 TCATATGCTCACCAGTAACCAG 57.593 45.455 0.00 0.00 0.00 4.00
793 806 3.204827 ACGTAGATACCCGCGCGT 61.205 61.111 29.95 14.20 0.00 6.01
876 897 3.446873 ACATGAGAGAGAGTGAAAGCGAT 59.553 43.478 0.00 0.00 0.00 4.58
916 939 2.982744 GCCAGCGGGAACTTTCAGC 61.983 63.158 7.23 1.74 35.59 4.26
998 1022 1.149148 GAAGACTTGGGAGTTGACGC 58.851 55.000 0.00 0.00 35.88 5.19
1026 1050 2.261671 CCCGTCGAACCAGACCAG 59.738 66.667 0.00 0.00 37.85 4.00
1031 1055 2.106683 GGATTGCCCGTCGAACCAG 61.107 63.158 0.00 0.00 0.00 4.00
1040 1064 4.757355 TGGCCCTTGGATTGCCCG 62.757 66.667 0.00 0.00 44.72 6.13
1451 1475 3.792736 TATCAGGGGCGGTGGTGC 61.793 66.667 0.00 0.00 0.00 5.01
1453 1477 2.285069 TGTATCAGGGGCGGTGGT 60.285 61.111 0.00 0.00 0.00 4.16
1456 1480 3.849951 CGCTGTATCAGGGGCGGT 61.850 66.667 6.02 0.00 43.25 5.68
1461 1485 4.609018 CCGGCCGCTGTATCAGGG 62.609 72.222 22.85 0.00 42.81 4.45
1462 1486 3.849951 ACCGGCCGCTGTATCAGG 61.850 66.667 22.85 4.97 31.21 3.86
1463 1487 2.586079 CACCGGCCGCTGTATCAG 60.586 66.667 22.85 5.83 34.12 2.90
1464 1488 4.155733 CCACCGGCCGCTGTATCA 62.156 66.667 22.85 0.00 0.00 2.15
1465 1489 3.792053 CTCCACCGGCCGCTGTATC 62.792 68.421 22.85 0.00 0.00 2.24
1466 1490 3.849951 CTCCACCGGCCGCTGTAT 61.850 66.667 22.85 0.00 0.00 2.29
1681 1708 0.456221 GATCTCTGTTTCTCCGCGGA 59.544 55.000 29.03 29.03 0.00 5.54
1703 1730 3.251004 GTGAAAGTGGTTGAAGCTGTAGG 59.749 47.826 0.00 0.00 0.00 3.18
1725 1752 0.471191 TCTCATAGCCAGCACCATGG 59.529 55.000 11.19 11.19 43.72 3.66
1849 1876 6.936900 TCTTCGAATTTCTTGTTCATCTCCTT 59.063 34.615 0.00 0.00 0.00 3.36
1851 1878 6.370166 ACTCTTCGAATTTCTTGTTCATCTCC 59.630 38.462 0.00 0.00 0.00 3.71
1947 1974 4.017126 TGATTTTCCGCTCTGTCTCTAGA 58.983 43.478 0.00 0.00 0.00 2.43
1948 1975 4.377839 TGATTTTCCGCTCTGTCTCTAG 57.622 45.455 0.00 0.00 0.00 2.43
1949 1976 4.160439 ACATGATTTTCCGCTCTGTCTCTA 59.840 41.667 0.00 0.00 0.00 2.43
1950 1977 3.055530 ACATGATTTTCCGCTCTGTCTCT 60.056 43.478 0.00 0.00 0.00 3.10
1951 1978 3.265791 ACATGATTTTCCGCTCTGTCTC 58.734 45.455 0.00 0.00 0.00 3.36
1952 1979 3.340814 ACATGATTTTCCGCTCTGTCT 57.659 42.857 0.00 0.00 0.00 3.41
1953 1980 4.184629 AGTACATGATTTTCCGCTCTGTC 58.815 43.478 0.00 0.00 0.00 3.51
1968 1995 4.202060 ACTCTACAATCTGCGGAGTACATG 60.202 45.833 3.10 1.91 33.19 3.21
2123 2178 1.425428 GTTCGCTTGAATCCCGCTG 59.575 57.895 0.00 0.00 33.37 5.18
2205 2260 7.703621 CCGACTTGGTAGAAATACTTCGAAATA 59.296 37.037 0.00 0.00 36.61 1.40
2206 2261 6.534079 CCGACTTGGTAGAAATACTTCGAAAT 59.466 38.462 0.00 0.00 36.61 2.17
2207 2262 5.865552 CCGACTTGGTAGAAATACTTCGAAA 59.134 40.000 0.00 0.00 36.61 3.46
2208 2263 5.404946 CCGACTTGGTAGAAATACTTCGAA 58.595 41.667 0.00 0.00 36.61 3.71
2209 2264 4.142315 CCCGACTTGGTAGAAATACTTCGA 60.142 45.833 0.00 0.00 34.40 3.71
2211 2266 3.869832 GCCCGACTTGGTAGAAATACTTC 59.130 47.826 0.00 0.00 35.15 3.01
2212 2267 3.518303 AGCCCGACTTGGTAGAAATACTT 59.482 43.478 0.00 0.00 35.15 2.24
2213 2268 3.105283 AGCCCGACTTGGTAGAAATACT 58.895 45.455 0.00 0.00 35.15 2.12
2214 2269 3.538634 AGCCCGACTTGGTAGAAATAC 57.461 47.619 0.00 0.00 35.15 1.89
2216 2271 3.434940 AAAGCCCGACTTGGTAGAAAT 57.565 42.857 0.00 0.00 39.09 2.17
2217 2272 2.943036 AAAGCCCGACTTGGTAGAAA 57.057 45.000 0.00 0.00 39.09 2.52
2218 2273 2.774687 GAAAAGCCCGACTTGGTAGAA 58.225 47.619 0.00 0.00 39.09 2.10
2222 2277 0.179040 TTCGAAAAGCCCGACTTGGT 60.179 50.000 0.00 0.00 39.09 3.67
2223 2278 0.517316 CTTCGAAAAGCCCGACTTGG 59.483 55.000 0.00 0.00 39.09 3.61
2227 2307 1.206831 GCACTTCGAAAAGCCCGAC 59.793 57.895 9.65 0.00 35.81 4.79
2228 2308 1.964373 GGCACTTCGAAAAGCCCGA 60.964 57.895 23.25 0.00 41.25 5.14
2229 2309 1.586154 ATGGCACTTCGAAAAGCCCG 61.586 55.000 27.90 7.94 46.45 6.13
2233 2313 3.837213 ATGTGATGGCACTTCGAAAAG 57.163 42.857 0.00 0.00 45.36 2.27
2234 2314 7.566760 AATATATGTGATGGCACTTCGAAAA 57.433 32.000 0.00 0.00 45.36 2.29
2238 2318 7.387673 TCCTTTAATATATGTGATGGCACTTCG 59.612 37.037 0.00 0.00 45.36 3.79
2258 2338 9.734984 CCTCCAGTATTTAACTCTTTTCCTTTA 57.265 33.333 0.00 0.00 35.76 1.85
2326 3126 7.170151 GGAATTGGTAACTAAACGTGCATTTTT 59.830 33.333 0.00 0.00 37.61 1.94
2388 3199 4.507710 TGCTCTTAGATTGTAGCAGGTTG 58.492 43.478 0.00 0.00 39.92 3.77
2389 3200 4.826274 TGCTCTTAGATTGTAGCAGGTT 57.174 40.909 0.00 0.00 39.92 3.50
2407 3218 1.675641 GGTTGCCGTTGGAGATGCT 60.676 57.895 0.00 0.00 0.00 3.79
2415 3226 5.120053 GGAAGAAAATTTATGGTTGCCGTTG 59.880 40.000 0.00 0.00 0.00 4.10
2418 3229 3.857093 CGGAAGAAAATTTATGGTTGCCG 59.143 43.478 0.00 0.00 0.00 5.69
2736 3547 2.401583 TGTCGCTAGCATTGAATGGT 57.598 45.000 16.45 14.69 44.27 3.55
2737 3548 3.809279 TGTATGTCGCTAGCATTGAATGG 59.191 43.478 16.45 0.00 0.00 3.16
2745 3556 7.728847 ATTATCAAAATGTATGTCGCTAGCA 57.271 32.000 16.45 0.00 0.00 3.49
2766 3577 9.444600 AATTTCTCCGCTTAGTTTGAGTTATTA 57.555 29.630 0.00 0.00 0.00 0.98
2769 3580 6.090358 CGAATTTCTCCGCTTAGTTTGAGTTA 59.910 38.462 0.00 0.00 0.00 2.24
2807 3619 8.370493 AGTCCGTCATGTTTATATGAAATCAG 57.630 34.615 0.00 0.00 38.69 2.90
2831 3645 9.306280 CGCTTAATCGATGTAAATGTAATGAAG 57.694 33.333 0.00 0.00 0.00 3.02
2864 3678 3.322254 CGACCATTTAGACCTAGCCAGAT 59.678 47.826 0.00 0.00 0.00 2.90
2997 3811 2.930562 AGCTTCACTTCCCGGGCT 60.931 61.111 18.49 3.12 0.00 5.19
3137 3952 0.249911 GGCGCCGAAGAATAGTCCAT 60.250 55.000 12.58 0.00 0.00 3.41
3140 3955 4.029287 GGGCGCCGAAGAATAGTC 57.971 61.111 22.54 0.00 0.00 2.59
3165 3992 3.626924 ACCACGAAGAAGCCGGCT 61.627 61.111 27.08 27.08 0.00 5.52
3245 4613 0.109272 GAGTGCGACGATCAAGTGGA 60.109 55.000 0.00 0.00 0.00 4.02
3251 4629 1.446099 GCAAGGAGTGCGACGATCA 60.446 57.895 0.00 0.00 45.10 2.92
3252 4630 3.389206 GCAAGGAGTGCGACGATC 58.611 61.111 0.00 0.00 45.10 3.69
3279 4657 3.702048 GGTACCGGCAGCAGGTGA 61.702 66.667 26.00 8.41 42.83 4.02
3293 4671 4.395959 AGAGCGGATTTTATTGACGGTA 57.604 40.909 0.00 0.00 35.27 4.02
3295 4673 4.142687 ACAAAGAGCGGATTTTATTGACGG 60.143 41.667 0.00 0.00 0.00 4.79
3309 4687 4.663636 ATTAACTTTCCGACAAAGAGCG 57.336 40.909 12.27 0.00 0.00 5.03
3310 4688 5.154222 CCAATTAACTTTCCGACAAAGAGC 58.846 41.667 12.27 0.00 0.00 4.09
3311 4689 5.472137 TCCCAATTAACTTTCCGACAAAGAG 59.528 40.000 12.27 0.00 0.00 2.85
3313 4691 5.240844 ACTCCCAATTAACTTTCCGACAAAG 59.759 40.000 5.53 5.53 0.00 2.77
3314 4692 5.134661 ACTCCCAATTAACTTTCCGACAAA 58.865 37.500 0.00 0.00 0.00 2.83
3315 4693 4.721132 ACTCCCAATTAACTTTCCGACAA 58.279 39.130 0.00 0.00 0.00 3.18
3318 4696 7.169591 TCATTAACTCCCAATTAACTTTCCGA 58.830 34.615 0.00 0.00 0.00 4.55
3319 4697 7.385778 TCATTAACTCCCAATTAACTTTCCG 57.614 36.000 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.