Multiple sequence alignment - TraesCS1D01G106000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G106000 chr1D 100.000 3654 0 0 2167 5820 97919112 97922765 0.000000e+00 6748
1 TraesCS1D01G106000 chr1D 100.000 1129 0 0 745 1873 97917690 97918818 0.000000e+00 2085
2 TraesCS1D01G106000 chr1D 100.000 562 0 0 1 562 97916946 97917507 0.000000e+00 1038
3 TraesCS1D01G106000 chr1A 91.052 1531 111 16 2169 3691 93398611 93400123 0.000000e+00 2045
4 TraesCS1D01G106000 chr1A 95.789 1211 32 11 4621 5818 93400710 93401914 0.000000e+00 1936
5 TraesCS1D01G106000 chr1A 89.715 1157 53 25 745 1870 93397436 93398557 0.000000e+00 1417
6 TraesCS1D01G106000 chr1A 95.221 565 11 5 1 549 93396837 93397401 0.000000e+00 880
7 TraesCS1D01G106000 chr1A 93.933 445 24 3 4009 4452 93400217 93400659 0.000000e+00 669
8 TraesCS1D01G106000 chr1A 94.350 177 5 2 3853 4024 50339325 50339501 3.460000e-67 267
9 TraesCS1D01G106000 chr1B 90.361 1162 51 21 745 1873 155411350 155410217 0.000000e+00 1469
10 TraesCS1D01G106000 chr1B 97.657 811 16 3 5011 5820 155407015 155406207 0.000000e+00 1389
11 TraesCS1D01G106000 chr1B 91.537 898 57 14 4615 5503 155407913 155407026 0.000000e+00 1219
12 TraesCS1D01G106000 chr1B 89.304 963 76 15 2890 3847 155409384 155408444 0.000000e+00 1182
13 TraesCS1D01G106000 chr1B 94.876 566 13 4 1 553 155412276 155411714 0.000000e+00 870
14 TraesCS1D01G106000 chr1B 87.057 734 63 18 2167 2890 155410155 155409444 0.000000e+00 800
15 TraesCS1D01G106000 chr1B 92.085 518 32 7 4015 4528 155408461 155407949 0.000000e+00 721
16 TraesCS1D01G106000 chr1B 94.350 177 5 2 3844 4015 456742192 456742368 3.460000e-67 267
17 TraesCS1D01G106000 chr3A 95.322 171 3 2 3853 4018 565776542 565776372 3.460000e-67 267
18 TraesCS1D01G106000 chr6B 93.011 186 6 3 3849 4029 639989157 639988974 1.240000e-66 265
19 TraesCS1D01G106000 chr6B 90.909 121 9 2 4516 4634 454733140 454733020 1.680000e-35 161
20 TraesCS1D01G106000 chr3D 91.710 193 7 4 3824 4011 422475498 422475686 5.790000e-65 259
21 TraesCS1D01G106000 chr3D 95.413 109 5 0 4516 4624 536331139 536331031 2.160000e-39 174
22 TraesCS1D01G106000 chr3D 90.833 120 11 0 4507 4626 43996324 43996205 1.680000e-35 161
23 TraesCS1D01G106000 chr4A 92.432 185 7 4 3836 4014 89423267 89423084 2.080000e-64 257
24 TraesCS1D01G106000 chr4A 90.050 201 11 5 3849 4041 111287091 111286892 9.680000e-63 252
25 TraesCS1D01G106000 chr2B 92.432 185 6 4 3849 4027 184124220 184124038 2.080000e-64 257
26 TraesCS1D01G106000 chr2B 92.241 116 9 0 4510 4625 142916422 142916537 1.300000e-36 165
27 TraesCS1D01G106000 chr6A 90.452 199 11 5 3835 4027 135677044 135677240 7.480000e-64 255
28 TraesCS1D01G106000 chr6A 93.805 113 7 0 4516 4628 170017766 170017878 2.790000e-38 171
29 TraesCS1D01G106000 chr7B 96.364 110 4 0 4515 4624 683101465 683101574 1.290000e-41 182
30 TraesCS1D01G106000 chr5D 95.370 108 5 0 4516 4623 365693303 365693410 7.750000e-39 172
31 TraesCS1D01G106000 chr5A 95.370 108 5 0 4516 4623 467377452 467377559 7.750000e-39 172
32 TraesCS1D01G106000 chr4B 94.444 108 6 0 4516 4623 87405117 87405224 3.610000e-37 167


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G106000 chr1D 97916946 97922765 5819 False 3290.333333 6748 100.000000 1 5820 3 chr1D.!!$F1 5819
1 TraesCS1D01G106000 chr1A 93396837 93401914 5077 False 1389.400000 2045 93.142000 1 5818 5 chr1A.!!$F2 5817
2 TraesCS1D01G106000 chr1B 155406207 155412276 6069 True 1092.857143 1469 91.839571 1 5820 7 chr1B.!!$R1 5819

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
25 26 1.878953 ACAAACGGCCAACAGACTAG 58.121 50.000 2.24 0.0 0.00 2.57 F
1245 1467 0.387202 CTCTGCGAGGTCGGATTCAT 59.613 55.000 0.89 0.0 39.39 2.57 F
1270 1492 0.460284 GGACGCGTGGAGATGTGAAT 60.460 55.000 20.70 0.0 0.00 2.57 F
1318 1540 1.005867 GCGTGGTAGGTCGGTTTCA 60.006 57.895 0.00 0.0 0.00 2.69 F
2798 3027 1.447663 CGTCACCATGATGCGGACA 60.448 57.895 12.83 0.0 0.00 4.02 F
3888 4187 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.000 0.00 0.0 34.10 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1519 1741 0.112218 CCCTGTCCCATGACACCAAA 59.888 55.0 0.00 0.00 46.40 3.28 R
2678 2906 0.035915 GAGTGACTTCCTTCTGCCCC 60.036 60.0 0.00 0.00 0.00 5.80 R
3192 3483 0.392060 CTGTGTCCATAGCAGCTGCA 60.392 55.0 38.24 24.73 45.16 4.41 R
3219 3510 7.251704 AGAAAGAATGTGCATAAATACCTCG 57.748 36.0 0.00 0.00 0.00 4.63 R
3909 4208 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.0 8.73 0.00 40.08 4.58 R
4836 5194 0.314935 CAACATGTCACAGGGTTGCC 59.685 55.0 11.05 0.00 34.86 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 1.878953 ACAAACGGCCAACAGACTAG 58.121 50.000 2.24 0.00 0.00 2.57
149 152 2.246739 CCATGATACCGTGCCTGCG 61.247 63.158 0.00 0.00 0.00 5.18
289 292 3.118992 CCTCCCTTAAAATGCAAGAAGCC 60.119 47.826 0.00 0.00 44.83 4.35
339 342 9.693739 ACAATGGAATATACATTAGGAACAACA 57.306 29.630 5.52 0.00 36.47 3.33
344 347 9.516314 GGAATATACATTAGGAACAACAAAAGC 57.484 33.333 0.00 0.00 0.00 3.51
910 1113 6.171213 TCATATACGAGCCGAGAATCTTAGA 58.829 40.000 1.50 0.00 0.00 2.10
956 1159 1.919240 TGTGAGCCGACCTAGAAGAA 58.081 50.000 0.00 0.00 0.00 2.52
1245 1467 0.387202 CTCTGCGAGGTCGGATTCAT 59.613 55.000 0.89 0.00 39.39 2.57
1270 1492 0.460284 GGACGCGTGGAGATGTGAAT 60.460 55.000 20.70 0.00 0.00 2.57
1272 1494 1.324736 GACGCGTGGAGATGTGAATTC 59.675 52.381 20.70 0.00 0.00 2.17
1275 1497 3.181475 ACGCGTGGAGATGTGAATTCTAT 60.181 43.478 12.93 1.30 0.00 1.98
1297 1519 2.934553 GGTCGGCTAGCGAATTAGTTTT 59.065 45.455 9.00 0.00 0.00 2.43
1318 1540 1.005867 GCGTGGTAGGTCGGTTTCA 60.006 57.895 0.00 0.00 0.00 2.69
1321 1543 1.636988 GTGGTAGGTCGGTTTCATCG 58.363 55.000 0.00 0.00 0.00 3.84
1363 1585 4.611355 CGTTTGTAGGTCAGCAATGTTCTG 60.611 45.833 0.00 0.00 0.00 3.02
1368 1590 4.558226 AGGTCAGCAATGTTCTGTGATA 57.442 40.909 0.00 0.00 33.48 2.15
1369 1591 4.256920 AGGTCAGCAATGTTCTGTGATAC 58.743 43.478 0.00 0.00 33.48 2.24
1370 1592 4.019860 AGGTCAGCAATGTTCTGTGATACT 60.020 41.667 0.00 0.00 33.48 2.12
1372 1594 5.391310 GGTCAGCAATGTTCTGTGATACTTG 60.391 44.000 0.00 0.00 33.48 3.16
1373 1595 4.154737 TCAGCAATGTTCTGTGATACTTGC 59.845 41.667 0.00 0.00 38.17 4.01
1374 1596 4.074259 AGCAATGTTCTGTGATACTTGCA 58.926 39.130 7.06 0.00 39.84 4.08
1375 1597 4.703575 AGCAATGTTCTGTGATACTTGCAT 59.296 37.500 7.06 0.00 39.84 3.96
1377 1599 5.287752 GCAATGTTCTGTGATACTTGCATTG 59.712 40.000 0.00 0.00 42.52 2.82
1378 1600 4.424061 TGTTCTGTGATACTTGCATTGC 57.576 40.909 0.46 0.46 0.00 3.56
1379 1601 3.819902 TGTTCTGTGATACTTGCATTGCA 59.180 39.130 7.38 7.38 36.47 4.08
1380 1602 4.161333 GTTCTGTGATACTTGCATTGCAC 58.839 43.478 11.66 0.00 38.71 4.57
1381 1603 3.410508 TCTGTGATACTTGCATTGCACA 58.589 40.909 11.66 2.60 38.71 4.57
1382 1604 3.189080 TCTGTGATACTTGCATTGCACAC 59.811 43.478 11.66 15.44 38.71 3.82
1383 1605 3.148412 TGTGATACTTGCATTGCACACT 58.852 40.909 22.22 8.39 38.71 3.55
1384 1606 3.189080 TGTGATACTTGCATTGCACACTC 59.811 43.478 22.22 13.52 38.71 3.51
1385 1607 3.189080 GTGATACTTGCATTGCACACTCA 59.811 43.478 11.66 9.22 38.71 3.41
1386 1608 3.819902 TGATACTTGCATTGCACACTCAA 59.180 39.130 11.66 0.00 38.71 3.02
1387 1609 2.497107 ACTTGCATTGCACACTCAAC 57.503 45.000 11.66 0.00 38.71 3.18
1388 1610 2.026641 ACTTGCATTGCACACTCAACT 58.973 42.857 11.66 0.00 38.71 3.16
1389 1611 2.428171 ACTTGCATTGCACACTCAACTT 59.572 40.909 11.66 0.00 38.71 2.66
1390 1612 3.119029 ACTTGCATTGCACACTCAACTTT 60.119 39.130 11.66 0.00 38.71 2.66
1391 1613 4.097741 ACTTGCATTGCACACTCAACTTTA 59.902 37.500 11.66 0.00 38.71 1.85
1392 1614 4.852134 TGCATTGCACACTCAACTTTAT 57.148 36.364 7.38 0.00 31.71 1.40
1393 1615 5.199024 TGCATTGCACACTCAACTTTATT 57.801 34.783 7.38 0.00 31.71 1.40
1394 1616 4.983538 TGCATTGCACACTCAACTTTATTG 59.016 37.500 7.38 0.00 31.71 1.90
1395 1617 4.984161 GCATTGCACACTCAACTTTATTGT 59.016 37.500 3.15 0.00 0.00 2.71
1396 1618 6.148948 GCATTGCACACTCAACTTTATTGTA 58.851 36.000 3.15 0.00 0.00 2.41
1403 1625 8.690840 GCACACTCAACTTTATTGTACATTTTC 58.309 33.333 0.00 0.00 0.00 2.29
1404 1626 9.950680 CACACTCAACTTTATTGTACATTTTCT 57.049 29.630 0.00 0.00 0.00 2.52
1434 1656 3.199946 TGGGCTCCATTTAGTCGATCTTT 59.800 43.478 0.00 0.00 0.00 2.52
1463 1685 2.273370 TAGACGACCTGATTGTTCGC 57.727 50.000 0.00 0.00 0.00 4.70
1465 1687 1.683790 GACGACCTGATTGTTCGCGG 61.684 60.000 6.13 0.00 0.00 6.46
1519 1741 4.260866 GCTCATGTTTGTTTGCTTGCAAAT 60.261 37.500 21.25 4.26 37.02 2.32
1530 1752 3.132160 TGCTTGCAAATTTGGTGTCATG 58.868 40.909 19.47 11.35 0.00 3.07
1822 2044 4.211164 CGTCTTCACAACAAGCAATCTGTA 59.789 41.667 0.00 0.00 0.00 2.74
2209 2431 2.930950 TGTAAGGGCATATGAGGTTGC 58.069 47.619 6.97 0.09 38.14 4.17
2226 2453 2.192664 TGCGCCCTGAATTTGAGTTA 57.807 45.000 4.18 0.00 0.00 2.24
2261 2488 5.530915 TCTTGTTAGTCTTCCATGTTTGGTG 59.469 40.000 0.00 0.00 44.06 4.17
2262 2489 4.141287 TGTTAGTCTTCCATGTTTGGTGG 58.859 43.478 0.00 0.00 44.06 4.61
2281 2508 5.705441 TGGTGGACAGTATTCTTGAATGAAC 59.295 40.000 6.15 0.00 0.00 3.18
2353 2581 8.469200 TCATTTTGTCTTGTTGATCTTCTGTTT 58.531 29.630 0.00 0.00 0.00 2.83
2389 2617 6.603599 AGCCTTTTAGCTATTAAAGGGAACTG 59.396 38.462 27.16 10.32 46.30 3.16
2391 2619 7.415318 GCCTTTTAGCTATTAAAGGGAACTGTC 60.415 40.741 27.16 12.70 46.30 3.51
2398 2626 6.258947 GCTATTAAAGGGAACTGTCATGAGAC 59.741 42.308 0.00 0.00 42.68 3.36
2432 2660 2.742589 GGTGGCTTACAAACTACAGAGC 59.257 50.000 0.00 0.00 0.00 4.09
2438 2666 2.185004 ACAAACTACAGAGCGCCATT 57.815 45.000 2.29 0.00 0.00 3.16
2481 2709 9.691362 AATAAATTAGCAACCAAGTAAACACTG 57.309 29.630 0.00 0.00 0.00 3.66
2524 2752 4.211164 GCAACCATTTAGGCACAAAAGAAC 59.789 41.667 0.00 0.00 43.14 3.01
2574 2802 4.010349 GGTGAAACATAAGTTGAGGGAGG 58.990 47.826 0.00 0.00 39.98 4.30
2678 2906 2.921912 GCACACGGTTGAATGGTTCATG 60.922 50.000 0.00 0.00 39.84 3.07
2717 2945 4.461781 ACTCCAAAAGCAAGAATCCTGATG 59.538 41.667 0.00 0.00 0.00 3.07
2722 2950 7.833682 TCCAAAAGCAAGAATCCTGATGTTATA 59.166 33.333 0.00 0.00 0.00 0.98
2776 3004 7.872483 GGAGCTGATGGTTCTTTATTTTTCAAA 59.128 33.333 0.00 0.00 0.00 2.69
2781 3009 8.494347 TGATGGTTCTTTATTTTTCAAAATGCG 58.506 29.630 7.63 0.00 38.90 4.73
2798 3027 1.447663 CGTCACCATGATGCGGACA 60.448 57.895 12.83 0.00 0.00 4.02
2886 3116 3.347216 TCAGGCTTAGTTTGGCATTCTC 58.653 45.455 0.00 0.00 0.00 2.87
2887 3117 2.096496 CAGGCTTAGTTTGGCATTCTCG 59.904 50.000 0.00 0.00 0.00 4.04
2957 3247 6.539649 TGTGTAACAGTAAGATTTCACAGC 57.460 37.500 0.00 0.00 45.67 4.40
2958 3248 6.052360 TGTGTAACAGTAAGATTTCACAGCA 58.948 36.000 0.00 0.00 45.67 4.41
2959 3249 6.202762 TGTGTAACAGTAAGATTTCACAGCAG 59.797 38.462 0.00 0.00 45.67 4.24
3022 3312 6.311935 GTGAAATGTTCCATTTGGTCATGATG 59.688 38.462 6.91 0.00 33.81 3.07
3032 3322 3.057969 TGGTCATGATGTTGACTGGAC 57.942 47.619 0.00 0.00 44.39 4.02
3192 3483 5.316987 CCACTTTTCCTGGACTCAAATACT 58.683 41.667 0.00 0.00 0.00 2.12
3219 3510 2.749076 TGCTATGGACACAGCAATTCAC 59.251 45.455 2.30 0.00 44.49 3.18
3228 3519 4.072131 ACACAGCAATTCACGAGGTATTT 58.928 39.130 0.00 0.00 0.00 1.40
3284 3575 1.607628 AGCTTTGTTCTTCTGCAGCAG 59.392 47.619 17.10 17.10 0.00 4.24
3285 3576 1.929482 GCTTTGTTCTTCTGCAGCAGC 60.929 52.381 18.43 3.70 42.57 5.25
3351 3643 8.829373 AAGAAAAGAATACTATTGGGCAGAAT 57.171 30.769 0.00 0.00 0.00 2.40
3416 3709 7.620491 TGGTCATCTAGGGTGTAAGTATAAACA 59.380 37.037 0.00 0.00 0.00 2.83
3417 3710 8.648693 GGTCATCTAGGGTGTAAGTATAAACAT 58.351 37.037 0.00 0.00 0.00 2.71
3453 3746 5.290885 TGCAAGATGTAAGCATACAGTAACG 59.709 40.000 7.93 0.00 44.85 3.18
3561 3854 9.967346 TTATGAAAGATCTAGTAAGTCCAATCG 57.033 33.333 0.00 0.00 0.00 3.34
3562 3855 7.406031 TGAAAGATCTAGTAAGTCCAATCGT 57.594 36.000 0.00 0.00 0.00 3.73
3622 3920 2.478894 CGTTTGGTTATCTTCAGCACGT 59.521 45.455 0.00 0.00 0.00 4.49
3626 3924 2.271800 GGTTATCTTCAGCACGTCAGG 58.728 52.381 0.00 0.00 0.00 3.86
3684 3983 6.568462 GCACAATACCGCTGAATAATGCTAAT 60.568 38.462 0.00 0.00 0.00 1.73
3690 3989 5.590259 ACCGCTGAATAATGCTAATGAACTT 59.410 36.000 0.00 0.00 0.00 2.66
3691 3990 6.765989 ACCGCTGAATAATGCTAATGAACTTA 59.234 34.615 0.00 0.00 0.00 2.24
3719 4018 3.565902 TCACAGATCTATACTGCGACCTG 59.434 47.826 0.00 0.00 38.74 4.00
3732 4031 1.667724 GCGACCTGAATCCAGAATGTG 59.332 52.381 0.00 0.00 43.02 3.21
3744 4043 6.683974 ATCCAGAATGTGCATACTGTTAAC 57.316 37.500 0.00 0.00 0.00 2.01
3768 4067 2.673258 TGTGTGTGACAGGAAGGTAGA 58.327 47.619 0.00 0.00 0.00 2.59
3801 4100 5.858581 GCACTGACACAATATCTTTTGTTCC 59.141 40.000 0.00 0.00 37.73 3.62
3852 4151 9.430838 GTCATCATGAATAATTGAAAAGAGACG 57.569 33.333 0.00 0.00 0.00 4.18
3853 4152 8.615211 TCATCATGAATAATTGAAAAGAGACGG 58.385 33.333 0.00 0.00 0.00 4.79
3854 4153 6.785191 TCATGAATAATTGAAAAGAGACGGC 58.215 36.000 0.00 0.00 0.00 5.68
3855 4154 6.374053 TCATGAATAATTGAAAAGAGACGGCA 59.626 34.615 0.00 0.00 0.00 5.69
3856 4155 6.182039 TGAATAATTGAAAAGAGACGGCAG 57.818 37.500 0.00 0.00 0.00 4.85
3857 4156 5.123820 TGAATAATTGAAAAGAGACGGCAGG 59.876 40.000 0.00 0.00 0.00 4.85
3858 4157 1.168714 ATTGAAAAGAGACGGCAGGC 58.831 50.000 0.00 0.00 0.00 4.85
3859 4158 0.889186 TTGAAAAGAGACGGCAGGCC 60.889 55.000 0.00 0.00 0.00 5.19
3860 4159 1.003233 GAAAAGAGACGGCAGGCCT 60.003 57.895 0.00 0.00 0.00 5.19
3861 4160 1.301677 GAAAAGAGACGGCAGGCCTG 61.302 60.000 29.34 29.34 0.00 4.85
3862 4161 2.754664 AAAAGAGACGGCAGGCCTGG 62.755 60.000 33.46 20.34 0.00 4.45
3875 4174 3.052082 CCTGGCGCAGTGGTGAAG 61.052 66.667 10.83 0.00 0.00 3.02
3876 4175 2.281070 CTGGCGCAGTGGTGAAGT 60.281 61.111 10.83 0.00 0.00 3.01
3877 4176 2.280797 TGGCGCAGTGGTGAAGTC 60.281 61.111 10.83 0.00 0.00 3.01
3878 4177 3.050275 GGCGCAGTGGTGAAGTCC 61.050 66.667 10.83 0.00 0.00 3.85
3879 4178 2.031163 GCGCAGTGGTGAAGTCCT 59.969 61.111 0.30 0.00 0.00 3.85
3880 4179 2.029844 GCGCAGTGGTGAAGTCCTC 61.030 63.158 0.30 0.00 0.00 3.71
3881 4180 1.374758 CGCAGTGGTGAAGTCCTCC 60.375 63.158 0.00 0.00 0.00 4.30
3882 4181 1.003233 GCAGTGGTGAAGTCCTCCC 60.003 63.158 0.00 0.00 0.00 4.30
3883 4182 1.679898 CAGTGGTGAAGTCCTCCCC 59.320 63.158 0.00 0.00 0.00 4.81
3884 4183 1.127567 CAGTGGTGAAGTCCTCCCCA 61.128 60.000 0.00 0.00 0.00 4.96
3885 4184 1.128188 AGTGGTGAAGTCCTCCCCAC 61.128 60.000 0.00 0.00 44.69 4.61
3886 4185 1.128188 GTGGTGAAGTCCTCCCCACT 61.128 60.000 0.00 0.00 41.83 4.00
3887 4186 0.401395 TGGTGAAGTCCTCCCCACTT 60.401 55.000 0.00 0.00 36.77 3.16
3888 4187 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.000 0.00 0.00 34.10 3.16
3889 4188 0.765510 GTGAAGTCCTCCCCACTTGT 59.234 55.000 0.00 0.00 34.10 3.16
3890 4189 0.764890 TGAAGTCCTCCCCACTTGTG 59.235 55.000 0.00 0.00 34.10 3.33
3891 4190 0.606673 GAAGTCCTCCCCACTTGTGC 60.607 60.000 0.00 0.00 34.10 4.57
3892 4191 2.034221 GTCCTCCCCACTTGTGCC 59.966 66.667 0.00 0.00 0.00 5.01
3893 4192 2.449518 TCCTCCCCACTTGTGCCA 60.450 61.111 0.00 0.00 0.00 4.92
3894 4193 2.081787 TCCTCCCCACTTGTGCCAA 61.082 57.895 0.00 0.00 0.00 4.52
3895 4194 1.604593 CCTCCCCACTTGTGCCAAG 60.605 63.158 11.87 11.87 0.00 3.61
3896 4195 1.455849 CTCCCCACTTGTGCCAAGA 59.544 57.895 18.22 0.00 0.00 3.02
3897 4196 0.607489 CTCCCCACTTGTGCCAAGAG 60.607 60.000 18.22 11.85 0.00 2.85
3898 4197 1.604593 CCCCACTTGTGCCAAGAGG 60.605 63.158 18.22 18.17 38.23 3.69
3899 4198 1.151450 CCCACTTGTGCCAAGAGGT 59.849 57.895 21.11 2.99 37.19 3.85
3900 4199 0.468029 CCCACTTGTGCCAAGAGGTT 60.468 55.000 21.11 2.07 37.19 3.50
3901 4200 1.402787 CCACTTGTGCCAAGAGGTTT 58.597 50.000 18.22 0.00 37.19 3.27
3902 4201 1.756538 CCACTTGTGCCAAGAGGTTTT 59.243 47.619 18.22 0.00 37.19 2.43
3903 4202 2.223805 CCACTTGTGCCAAGAGGTTTTC 60.224 50.000 18.22 0.00 37.19 2.29
3904 4203 1.676006 ACTTGTGCCAAGAGGTTTTCG 59.324 47.619 18.22 0.00 37.19 3.46
3905 4204 1.001378 CTTGTGCCAAGAGGTTTTCGG 60.001 52.381 8.72 0.00 37.19 4.30
3906 4205 0.181587 TGTGCCAAGAGGTTTTCGGA 59.818 50.000 0.00 0.00 37.19 4.55
3907 4206 0.591659 GTGCCAAGAGGTTTTCGGAC 59.408 55.000 0.00 0.00 37.19 4.79
3908 4207 0.536460 TGCCAAGAGGTTTTCGGACC 60.536 55.000 0.00 0.00 40.11 4.46
3909 4208 0.536460 GCCAAGAGGTTTTCGGACCA 60.536 55.000 6.36 0.00 42.35 4.02
3910 4209 1.523758 CCAAGAGGTTTTCGGACCAG 58.476 55.000 6.36 0.00 42.35 4.00
3911 4210 0.875059 CAAGAGGTTTTCGGACCAGC 59.125 55.000 6.36 0.00 42.35 4.85
3912 4211 0.250770 AAGAGGTTTTCGGACCAGCC 60.251 55.000 6.36 0.00 42.35 4.85
3913 4212 1.128188 AGAGGTTTTCGGACCAGCCT 61.128 55.000 6.36 0.00 42.35 4.58
3914 4213 0.673956 GAGGTTTTCGGACCAGCCTC 60.674 60.000 4.20 4.20 42.35 4.70
3915 4214 1.128188 AGGTTTTCGGACCAGCCTCT 61.128 55.000 6.36 0.00 42.35 3.69
3916 4215 0.673956 GGTTTTCGGACCAGCCTCTC 60.674 60.000 0.00 0.00 39.57 3.20
3917 4216 0.321996 GTTTTCGGACCAGCCTCTCT 59.678 55.000 0.00 0.00 0.00 3.10
3918 4217 0.321671 TTTTCGGACCAGCCTCTCTG 59.678 55.000 0.00 0.00 42.49 3.35
3919 4218 2.172483 TTTCGGACCAGCCTCTCTGC 62.172 60.000 0.00 0.00 41.50 4.26
3920 4219 3.385384 CGGACCAGCCTCTCTGCA 61.385 66.667 0.00 0.00 41.50 4.41
3921 4220 2.729479 CGGACCAGCCTCTCTGCAT 61.729 63.158 0.00 0.00 41.50 3.96
3922 4221 1.606531 GGACCAGCCTCTCTGCATT 59.393 57.895 0.00 0.00 41.50 3.56
3923 4222 0.747283 GGACCAGCCTCTCTGCATTG 60.747 60.000 0.00 0.00 41.50 2.82
3924 4223 1.375098 GACCAGCCTCTCTGCATTGC 61.375 60.000 0.46 0.46 41.50 3.56
3925 4224 1.378119 CCAGCCTCTCTGCATTGCA 60.378 57.895 11.50 11.50 41.50 4.08
3926 4225 1.654954 CCAGCCTCTCTGCATTGCAC 61.655 60.000 7.38 0.00 41.50 4.57
3927 4226 0.677098 CAGCCTCTCTGCATTGCACT 60.677 55.000 7.38 0.00 35.78 4.40
3928 4227 0.037877 AGCCTCTCTGCATTGCACTT 59.962 50.000 7.38 0.00 33.79 3.16
3929 4228 0.886563 GCCTCTCTGCATTGCACTTT 59.113 50.000 7.38 0.00 33.79 2.66
3930 4229 1.402456 GCCTCTCTGCATTGCACTTTG 60.402 52.381 7.38 0.00 33.79 2.77
3931 4230 1.402456 CCTCTCTGCATTGCACTTTGC 60.402 52.381 7.38 8.20 45.29 3.68
3941 4240 3.339547 GCACTTTGCAGGGGTAAGA 57.660 52.632 2.16 0.00 44.26 2.10
3942 4241 0.881796 GCACTTTGCAGGGGTAAGAC 59.118 55.000 2.16 0.00 44.26 3.01
3943 4242 1.545651 GCACTTTGCAGGGGTAAGACT 60.546 52.381 2.16 0.00 44.26 3.24
3944 4243 2.290071 GCACTTTGCAGGGGTAAGACTA 60.290 50.000 2.16 0.00 44.26 2.59
3945 4244 3.600388 CACTTTGCAGGGGTAAGACTAG 58.400 50.000 2.16 0.00 0.00 2.57
3946 4245 2.572104 ACTTTGCAGGGGTAAGACTAGG 59.428 50.000 2.16 0.00 0.00 3.02
3947 4246 2.337359 TTGCAGGGGTAAGACTAGGT 57.663 50.000 0.00 0.00 0.00 3.08
3948 4247 2.337359 TGCAGGGGTAAGACTAGGTT 57.663 50.000 0.00 0.00 0.00 3.50
3949 4248 3.478175 TGCAGGGGTAAGACTAGGTTA 57.522 47.619 0.00 0.00 0.00 2.85
3950 4249 3.102204 TGCAGGGGTAAGACTAGGTTAC 58.898 50.000 8.18 8.18 0.00 2.50
3951 4250 3.245875 TGCAGGGGTAAGACTAGGTTACT 60.246 47.826 13.85 0.00 32.02 2.24
3952 4251 4.017222 TGCAGGGGTAAGACTAGGTTACTA 60.017 45.833 13.85 0.00 32.02 1.82
3953 4252 5.146298 GCAGGGGTAAGACTAGGTTACTAT 58.854 45.833 13.85 2.45 32.02 2.12
3954 4253 6.126097 TGCAGGGGTAAGACTAGGTTACTATA 60.126 42.308 13.85 0.00 32.02 1.31
3955 4254 6.779539 GCAGGGGTAAGACTAGGTTACTATAA 59.220 42.308 13.85 0.00 32.02 0.98
3956 4255 7.454066 GCAGGGGTAAGACTAGGTTACTATAAT 59.546 40.741 13.85 0.00 32.02 1.28
3957 4256 9.022884 CAGGGGTAAGACTAGGTTACTATAATC 57.977 40.741 13.85 1.23 32.02 1.75
3958 4257 8.176105 AGGGGTAAGACTAGGTTACTATAATCC 58.824 40.741 13.85 7.73 32.02 3.01
3959 4258 7.398618 GGGGTAAGACTAGGTTACTATAATCCC 59.601 44.444 13.85 11.44 32.02 3.85
3960 4259 8.176105 GGGTAAGACTAGGTTACTATAATCCCT 58.824 40.741 13.85 0.00 32.02 4.20
3961 4260 9.241919 GGTAAGACTAGGTTACTATAATCCCTC 57.758 40.741 13.85 0.00 32.02 4.30
3962 4261 9.241919 GTAAGACTAGGTTACTATAATCCCTCC 57.758 40.741 9.09 0.00 0.00 4.30
3963 4262 6.803017 AGACTAGGTTACTATAATCCCTCCC 58.197 44.000 0.00 0.00 0.00 4.30
3964 4263 5.913277 ACTAGGTTACTATAATCCCTCCCC 58.087 45.833 0.00 0.00 0.00 4.81
3965 4264 4.864252 AGGTTACTATAATCCCTCCCCA 57.136 45.455 0.00 0.00 0.00 4.96
3966 4265 4.764491 AGGTTACTATAATCCCTCCCCAG 58.236 47.826 0.00 0.00 0.00 4.45
3967 4266 4.426023 AGGTTACTATAATCCCTCCCCAGA 59.574 45.833 0.00 0.00 0.00 3.86
3968 4267 4.531339 GGTTACTATAATCCCTCCCCAGAC 59.469 50.000 0.00 0.00 0.00 3.51
3969 4268 3.277416 ACTATAATCCCTCCCCAGACC 57.723 52.381 0.00 0.00 0.00 3.85
3970 4269 2.157989 ACTATAATCCCTCCCCAGACCC 60.158 54.545 0.00 0.00 0.00 4.46
3971 4270 0.103876 ATAATCCCTCCCCAGACCCC 60.104 60.000 0.00 0.00 0.00 4.95
3972 4271 1.542093 TAATCCCTCCCCAGACCCCA 61.542 60.000 0.00 0.00 0.00 4.96
3973 4272 3.660092 ATCCCTCCCCAGACCCCAC 62.660 68.421 0.00 0.00 0.00 4.61
3975 4274 4.354943 CCTCCCCAGACCCCACCT 62.355 72.222 0.00 0.00 0.00 4.00
3976 4275 2.204151 CTCCCCAGACCCCACCTT 60.204 66.667 0.00 0.00 0.00 3.50
3977 4276 2.531685 TCCCCAGACCCCACCTTG 60.532 66.667 0.00 0.00 0.00 3.61
3978 4277 2.858974 CCCCAGACCCCACCTTGT 60.859 66.667 0.00 0.00 0.00 3.16
3979 4278 2.436109 CCCAGACCCCACCTTGTG 59.564 66.667 0.00 0.00 0.00 3.33
3980 4279 2.460853 CCCAGACCCCACCTTGTGT 61.461 63.158 0.00 0.00 0.00 3.72
3981 4280 1.228245 CCAGACCCCACCTTGTGTG 60.228 63.158 0.00 0.00 45.01 3.82
3993 4292 4.199432 ACCTTGTGTGAGAGCTTCTATG 57.801 45.455 0.00 0.00 0.00 2.23
3994 4293 2.935201 CCTTGTGTGAGAGCTTCTATGC 59.065 50.000 0.00 0.00 0.00 3.14
3995 4294 3.593096 CTTGTGTGAGAGCTTCTATGCA 58.407 45.455 0.00 0.00 34.99 3.96
3996 4295 2.964740 TGTGTGAGAGCTTCTATGCAC 58.035 47.619 0.00 0.00 34.99 4.57
3997 4296 2.564504 TGTGTGAGAGCTTCTATGCACT 59.435 45.455 0.00 0.00 36.63 4.40
3998 4297 2.928757 GTGTGAGAGCTTCTATGCACTG 59.071 50.000 0.00 0.00 34.23 3.66
3999 4298 2.093816 TGTGAGAGCTTCTATGCACTGG 60.094 50.000 0.00 0.00 34.23 4.00
4000 4299 1.483827 TGAGAGCTTCTATGCACTGGG 59.516 52.381 0.00 0.00 34.23 4.45
4001 4300 1.484240 GAGAGCTTCTATGCACTGGGT 59.516 52.381 0.00 0.00 34.23 4.51
4002 4301 1.484240 AGAGCTTCTATGCACTGGGTC 59.516 52.381 0.00 0.00 32.92 4.46
4003 4302 1.484240 GAGCTTCTATGCACTGGGTCT 59.516 52.381 0.00 0.00 34.99 3.85
4004 4303 1.209019 AGCTTCTATGCACTGGGTCTG 59.791 52.381 0.00 0.00 34.99 3.51
4005 4304 1.065854 GCTTCTATGCACTGGGTCTGT 60.066 52.381 0.00 0.00 0.00 3.41
4006 4305 2.898705 CTTCTATGCACTGGGTCTGTC 58.101 52.381 0.00 0.00 0.00 3.51
4007 4306 1.195115 TCTATGCACTGGGTCTGTCC 58.805 55.000 0.00 0.00 0.00 4.02
4008 4307 1.198713 CTATGCACTGGGTCTGTCCT 58.801 55.000 0.00 0.00 36.25 3.85
4009 4308 1.556911 CTATGCACTGGGTCTGTCCTT 59.443 52.381 0.00 0.00 36.25 3.36
4010 4309 0.773644 ATGCACTGGGTCTGTCCTTT 59.226 50.000 0.00 0.00 36.25 3.11
4011 4310 0.550914 TGCACTGGGTCTGTCCTTTT 59.449 50.000 0.00 0.00 36.25 2.27
4012 4311 1.064017 TGCACTGGGTCTGTCCTTTTT 60.064 47.619 0.00 0.00 36.25 1.94
4042 4341 7.655236 TGAATAATTGAAAACATGTGCTTGG 57.345 32.000 0.00 0.00 0.00 3.61
4068 4367 2.068837 AAATCTGCCATGCAACGTTG 57.931 45.000 23.90 23.90 38.41 4.10
4069 4368 0.961019 AATCTGCCATGCAACGTTGT 59.039 45.000 27.78 7.89 38.41 3.32
4070 4369 0.523072 ATCTGCCATGCAACGTTGTC 59.477 50.000 27.78 20.05 38.41 3.18
4071 4370 0.534877 TCTGCCATGCAACGTTGTCT 60.535 50.000 27.78 13.72 38.41 3.41
4072 4371 1.155889 CTGCCATGCAACGTTGTCTA 58.844 50.000 27.78 15.74 38.41 2.59
4073 4372 1.739466 CTGCCATGCAACGTTGTCTAT 59.261 47.619 27.78 17.15 38.41 1.98
4074 4373 1.468127 TGCCATGCAACGTTGTCTATG 59.532 47.619 27.78 25.12 34.76 2.23
4075 4374 1.468520 GCCATGCAACGTTGTCTATGT 59.531 47.619 27.78 6.75 0.00 2.29
4155 4455 0.379669 CGGCTGTTCAAGATGATGGC 59.620 55.000 0.00 0.00 0.00 4.40
4196 4496 3.455327 GATTTGAGCCGTTAGTACCTCC 58.545 50.000 0.00 0.00 0.00 4.30
4201 4502 1.732417 GCCGTTAGTACCTCCCCTCG 61.732 65.000 0.00 0.00 0.00 4.63
4203 4504 1.033746 CGTTAGTACCTCCCCTCGCA 61.034 60.000 0.00 0.00 0.00 5.10
4230 4531 8.132995 TGATGTTCATGTATGATGCTGATTTTC 58.867 33.333 0.00 0.00 36.56 2.29
4233 4534 7.756272 TGTTCATGTATGATGCTGATTTTCAAC 59.244 33.333 0.00 0.00 36.56 3.18
4237 4538 9.093970 CATGTATGATGCTGATTTTCAACAATT 57.906 29.630 0.00 0.00 0.00 2.32
4265 4566 6.102663 GCTACATTGTCTCACTGTGATACTT 58.897 40.000 21.88 10.63 30.29 2.24
4272 4573 7.482169 TGTCTCACTGTGATACTTATCCTTT 57.518 36.000 21.88 0.00 31.71 3.11
4394 4695 3.914312 CACTATGTGCCCGAGGTAATAG 58.086 50.000 0.00 0.00 0.00 1.73
4406 4707 3.307242 CGAGGTAATAGTCAGTGCTTTGC 59.693 47.826 0.00 0.00 0.00 3.68
4412 4713 0.183492 AGTCAGTGCTTTGCTTCCCA 59.817 50.000 0.00 0.00 0.00 4.37
4434 4735 4.391216 CACTTCTTGGAACAGCTCATAGTG 59.609 45.833 0.00 0.00 42.39 2.74
4435 4736 4.040952 ACTTCTTGGAACAGCTCATAGTGT 59.959 41.667 0.00 0.00 42.39 3.55
4436 4737 3.930336 TCTTGGAACAGCTCATAGTGTG 58.070 45.455 0.00 0.00 42.39 3.82
4437 4738 3.324846 TCTTGGAACAGCTCATAGTGTGT 59.675 43.478 0.00 0.00 42.39 3.72
4444 4745 2.477754 CAGCTCATAGTGTGTGTGTGTG 59.522 50.000 0.00 0.00 0.00 3.82
4446 4747 2.221749 GCTCATAGTGTGTGTGTGTGTG 59.778 50.000 0.00 0.00 0.00 3.82
4469 4770 2.480802 GTGTGTGTGTGTGTGTGTGTTA 59.519 45.455 0.00 0.00 0.00 2.41
4478 4779 5.567534 GTGTGTGTGTGTGTTAAGTGAAAAG 59.432 40.000 0.00 0.00 0.00 2.27
4484 4785 2.360801 TGTGTTAAGTGAAAAGGGCTGC 59.639 45.455 0.00 0.00 0.00 5.25
4501 4805 3.560882 GGCTGCCCATTTGATAGCTAGAT 60.561 47.826 7.66 0.00 34.89 1.98
4505 4809 3.192212 GCCCATTTGATAGCTAGATTGCC 59.808 47.826 0.00 0.00 0.00 4.52
4520 4878 3.454812 AGATTGCCGGTTATCTGGTACTT 59.545 43.478 16.54 0.00 41.89 2.24
4521 4879 2.973694 TGCCGGTTATCTGGTACTTC 57.026 50.000 1.90 0.00 41.89 3.01
4522 4880 1.483415 TGCCGGTTATCTGGTACTTCC 59.517 52.381 1.90 0.00 41.89 3.46
4523 4881 1.761198 GCCGGTTATCTGGTACTTCCT 59.239 52.381 1.90 0.00 41.89 3.36
4524 4882 2.223994 GCCGGTTATCTGGTACTTCCTC 60.224 54.545 1.90 0.00 41.89 3.71
4525 4883 3.297736 CCGGTTATCTGGTACTTCCTCT 58.702 50.000 0.00 0.00 35.48 3.69
4527 4885 3.700038 CGGTTATCTGGTACTTCCTCTGT 59.300 47.826 0.00 0.00 37.07 3.41
4528 4886 4.159879 CGGTTATCTGGTACTTCCTCTGTT 59.840 45.833 0.00 0.00 37.07 3.16
4529 4887 5.662456 GGTTATCTGGTACTTCCTCTGTTC 58.338 45.833 0.00 0.00 37.07 3.18
4530 4888 5.187186 GGTTATCTGGTACTTCCTCTGTTCA 59.813 44.000 0.00 0.00 37.07 3.18
4531 4889 6.127026 GGTTATCTGGTACTTCCTCTGTTCAT 60.127 42.308 0.00 0.00 37.07 2.57
4532 4890 7.331791 GTTATCTGGTACTTCCTCTGTTCATT 58.668 38.462 0.00 0.00 37.07 2.57
4533 4891 5.825593 TCTGGTACTTCCTCTGTTCATTT 57.174 39.130 0.00 0.00 37.07 2.32
4534 4892 6.187727 TCTGGTACTTCCTCTGTTCATTTT 57.812 37.500 0.00 0.00 37.07 1.82
4535 4893 6.601332 TCTGGTACTTCCTCTGTTCATTTTT 58.399 36.000 0.00 0.00 37.07 1.94
4536 4894 7.741785 TCTGGTACTTCCTCTGTTCATTTTTA 58.258 34.615 0.00 0.00 37.07 1.52
4537 4895 8.383175 TCTGGTACTTCCTCTGTTCATTTTTAT 58.617 33.333 0.00 0.00 37.07 1.40
4538 4896 9.667107 CTGGTACTTCCTCTGTTCATTTTTATA 57.333 33.333 0.00 0.00 37.07 0.98
4543 4901 9.793259 ACTTCCTCTGTTCATTTTTATAAGACA 57.207 29.630 0.00 0.00 0.00 3.41
4562 4920 9.950496 ATAAGACATTTTAGACATTCAGACACT 57.050 29.630 0.00 0.00 0.00 3.55
4563 4921 7.664082 AGACATTTTAGACATTCAGACACTG 57.336 36.000 0.00 0.00 0.00 3.66
4564 4922 7.220030 AGACATTTTAGACATTCAGACACTGT 58.780 34.615 0.00 0.00 32.61 3.55
4565 4923 7.716998 AGACATTTTAGACATTCAGACACTGTT 59.283 33.333 0.00 0.00 32.61 3.16
4566 4924 7.865707 ACATTTTAGACATTCAGACACTGTTC 58.134 34.615 0.00 0.00 32.61 3.18
4567 4925 7.498900 ACATTTTAGACATTCAGACACTGTTCA 59.501 33.333 0.00 0.00 32.61 3.18
4568 4926 7.857734 TTTTAGACATTCAGACACTGTTCAA 57.142 32.000 0.00 0.00 32.61 2.69
4569 4927 6.844696 TTAGACATTCAGACACTGTTCAAC 57.155 37.500 0.00 0.00 32.61 3.18
4570 4928 4.769688 AGACATTCAGACACTGTTCAACA 58.230 39.130 0.00 0.00 32.61 3.33
4571 4929 4.572389 AGACATTCAGACACTGTTCAACAC 59.428 41.667 0.00 0.00 32.61 3.32
4572 4930 4.260985 ACATTCAGACACTGTTCAACACA 58.739 39.130 0.00 0.00 32.61 3.72
4584 4942 4.728534 TGTTCAACACAGTACAAAGCAAC 58.271 39.130 0.00 0.00 0.00 4.17
4585 4943 4.102649 GTTCAACACAGTACAAAGCAACC 58.897 43.478 0.00 0.00 0.00 3.77
4586 4944 3.616219 TCAACACAGTACAAAGCAACCT 58.384 40.909 0.00 0.00 0.00 3.50
4587 4945 3.376859 TCAACACAGTACAAAGCAACCTG 59.623 43.478 0.00 0.00 0.00 4.00
4588 4946 2.999331 ACACAGTACAAAGCAACCTGT 58.001 42.857 0.00 0.00 36.85 4.00
4589 4947 2.943033 ACACAGTACAAAGCAACCTGTC 59.057 45.455 0.00 0.00 34.31 3.51
4590 4948 3.206150 CACAGTACAAAGCAACCTGTCT 58.794 45.455 0.00 0.00 34.31 3.41
4591 4949 3.002656 CACAGTACAAAGCAACCTGTCTG 59.997 47.826 0.00 0.00 34.31 3.51
4592 4950 3.118408 ACAGTACAAAGCAACCTGTCTGA 60.118 43.478 0.00 0.00 30.94 3.27
4593 4951 3.876914 CAGTACAAAGCAACCTGTCTGAA 59.123 43.478 0.00 0.00 0.00 3.02
4594 4952 4.335315 CAGTACAAAGCAACCTGTCTGAAA 59.665 41.667 0.00 0.00 0.00 2.69
4595 4953 3.782889 ACAAAGCAACCTGTCTGAAAC 57.217 42.857 0.00 0.00 0.00 2.78
4596 4954 2.097466 ACAAAGCAACCTGTCTGAAACG 59.903 45.455 0.00 0.00 0.00 3.60
4597 4955 2.038387 AAGCAACCTGTCTGAAACGT 57.962 45.000 0.00 0.00 0.00 3.99
4598 4956 1.583054 AGCAACCTGTCTGAAACGTC 58.417 50.000 0.00 0.00 0.00 4.34
4599 4957 1.139058 AGCAACCTGTCTGAAACGTCT 59.861 47.619 0.00 0.00 0.00 4.18
4600 4958 1.940613 GCAACCTGTCTGAAACGTCTT 59.059 47.619 0.00 0.00 0.00 3.01
4601 4959 3.128349 GCAACCTGTCTGAAACGTCTTA 58.872 45.455 0.00 0.00 0.00 2.10
4602 4960 3.746492 GCAACCTGTCTGAAACGTCTTAT 59.254 43.478 0.00 0.00 0.00 1.73
4603 4961 4.927425 GCAACCTGTCTGAAACGTCTTATA 59.073 41.667 0.00 0.00 0.00 0.98
4604 4962 5.407387 GCAACCTGTCTGAAACGTCTTATAA 59.593 40.000 0.00 0.00 0.00 0.98
4605 4963 6.073440 GCAACCTGTCTGAAACGTCTTATAAA 60.073 38.462 0.00 0.00 0.00 1.40
4606 4964 7.519328 GCAACCTGTCTGAAACGTCTTATAAAA 60.519 37.037 0.00 0.00 0.00 1.52
4607 4965 8.339714 CAACCTGTCTGAAACGTCTTATAAAAA 58.660 33.333 0.00 0.00 0.00 1.94
4608 4966 7.858583 ACCTGTCTGAAACGTCTTATAAAAAC 58.141 34.615 0.00 0.00 0.00 2.43
4609 4967 7.496591 ACCTGTCTGAAACGTCTTATAAAAACA 59.503 33.333 0.00 0.00 0.00 2.83
4610 4968 8.339714 CCTGTCTGAAACGTCTTATAAAAACAA 58.660 33.333 0.00 0.00 0.00 2.83
4611 4969 9.710979 CTGTCTGAAACGTCTTATAAAAACAAA 57.289 29.630 0.00 0.00 0.00 2.83
4612 4970 9.493206 TGTCTGAAACGTCTTATAAAAACAAAC 57.507 29.630 0.00 0.00 0.00 2.93
4613 4971 8.667204 GTCTGAAACGTCTTATAAAAACAAACG 58.333 33.333 0.00 0.00 35.00 3.60
4614 4972 7.851963 TCTGAAACGTCTTATAAAAACAAACGG 59.148 33.333 0.00 0.00 33.26 4.44
4615 4973 7.692088 TGAAACGTCTTATAAAAACAAACGGA 58.308 30.769 0.00 0.00 33.26 4.69
4616 4974 7.851963 TGAAACGTCTTATAAAAACAAACGGAG 59.148 33.333 0.00 0.00 33.26 4.63
4617 4975 6.232139 ACGTCTTATAAAAACAAACGGAGG 57.768 37.500 0.00 0.00 33.26 4.30
4618 4976 5.179929 ACGTCTTATAAAAACAAACGGAGGG 59.820 40.000 0.00 0.00 33.26 4.30
4619 4977 5.409214 CGTCTTATAAAAACAAACGGAGGGA 59.591 40.000 0.00 0.00 0.00 4.20
4620 4978 6.401796 CGTCTTATAAAAACAAACGGAGGGAG 60.402 42.308 0.00 0.00 0.00 4.30
4621 4979 6.429078 GTCTTATAAAAACAAACGGAGGGAGT 59.571 38.462 0.00 0.00 0.00 3.85
4622 4980 7.603784 GTCTTATAAAAACAAACGGAGGGAGTA 59.396 37.037 0.00 0.00 0.00 2.59
4623 4981 7.603784 TCTTATAAAAACAAACGGAGGGAGTAC 59.396 37.037 0.00 0.00 0.00 2.73
4624 4982 3.851458 AAAACAAACGGAGGGAGTACT 57.149 42.857 0.00 0.00 0.00 2.73
4625 4983 4.961438 AAAACAAACGGAGGGAGTACTA 57.039 40.909 0.00 0.00 0.00 1.82
4626 4984 5.494390 AAAACAAACGGAGGGAGTACTAT 57.506 39.130 0.00 0.00 0.00 2.12
4627 4985 5.494390 AAACAAACGGAGGGAGTACTATT 57.506 39.130 0.00 0.00 0.00 1.73
4628 4986 4.732672 ACAAACGGAGGGAGTACTATTC 57.267 45.455 0.00 0.00 0.00 1.75
4629 4987 4.091549 ACAAACGGAGGGAGTACTATTCA 58.908 43.478 0.00 0.00 0.00 2.57
4630 4988 4.529377 ACAAACGGAGGGAGTACTATTCAA 59.471 41.667 0.00 0.00 0.00 2.69
4631 4989 5.109903 CAAACGGAGGGAGTACTATTCAAG 58.890 45.833 0.00 0.00 0.00 3.02
4653 5011 4.708421 AGAATCTGTTGCCATTGCTATTGT 59.292 37.500 0.00 0.00 38.71 2.71
4690 5048 7.166473 CAGCTTGCTTAAAAGAGTAACTTGTTG 59.834 37.037 0.00 0.00 38.98 3.33
4700 5058 8.608844 AAAGAGTAACTTGTTGATCTTCGATT 57.391 30.769 12.25 0.39 38.98 3.34
4709 5067 9.987272 ACTTGTTGATCTTCGATTGATATATCA 57.013 29.630 11.49 11.49 34.44 2.15
4712 5070 8.367156 TGTTGATCTTCGATTGATATATCACCA 58.633 33.333 15.10 2.19 36.36 4.17
4783 5141 0.322816 TGGAGCAGGAGTTTGATGGC 60.323 55.000 0.00 0.00 0.00 4.40
4898 5260 4.737054 CATGAAAAGTCCCGGAGAATTTG 58.263 43.478 15.75 4.43 41.72 2.32
5057 5921 0.320771 AGCAGTAGCCTGAACCAACG 60.321 55.000 0.00 0.00 41.50 4.10
5148 6012 7.170393 TGCTGAGCTTGTCTCTAACTAATAA 57.830 36.000 5.83 0.00 42.38 1.40
5302 6167 5.953183 TCAATCAGCATAAGAAACGCAAAT 58.047 33.333 0.00 0.00 0.00 2.32
5335 6200 7.410800 TGATTTGCACTGATTGAATTGAAAC 57.589 32.000 0.00 0.00 0.00 2.78
5481 6346 5.715439 ATAGGGAACACATTGAATCAGGA 57.285 39.130 0.00 0.00 0.00 3.86
5489 6354 8.956426 GGAACACATTGAATCAGGAGTAAAATA 58.044 33.333 0.00 0.00 0.00 1.40
5668 6540 5.351458 GTGGATCCAAATACAAAATCCAGC 58.649 41.667 18.20 0.00 44.83 4.85
5708 6580 5.129980 ACATCATCAGCCTGAAAGAGACATA 59.870 40.000 0.00 0.00 34.07 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 4.141937 TGAAGACATCACAGGTGCCTATAC 60.142 45.833 0.00 0.00 31.50 1.47
149 152 9.174166 TCCAGTTATTTAAGGTTTTCTAGATGC 57.826 33.333 0.00 0.00 0.00 3.91
289 292 7.010552 TGTTTCAATTTGATGGTTACGGTTTTG 59.989 33.333 0.00 0.00 0.00 2.44
339 342 2.286772 CGCAAGGTTAGTGTTCGCTTTT 60.287 45.455 0.00 0.00 0.00 2.27
344 347 1.068474 CCTCGCAAGGTTAGTGTTCG 58.932 55.000 0.00 0.00 37.94 3.95
450 453 3.196040 GCCCATCAGCCATCTTTCA 57.804 52.632 0.00 0.00 0.00 2.69
787 990 2.355837 GAGCGGTTCTCGTGTGCA 60.356 61.111 0.00 0.00 41.72 4.57
872 1075 1.428869 ATATGAGCTGGACCCTGGTC 58.571 55.000 15.35 15.35 43.87 4.02
885 1088 4.955925 AGATTCTCGGCTCGTATATGAG 57.044 45.455 16.38 16.38 39.05 2.90
910 1113 0.826256 GACTTCCTTTTGGGCCGGTT 60.826 55.000 1.90 0.00 40.87 4.44
956 1159 3.365472 GCTCTTCTCTTCCTCTTCCTCT 58.635 50.000 0.00 0.00 0.00 3.69
1245 1467 1.613317 ATCTCCACGCGTCCAATCCA 61.613 55.000 9.86 0.00 0.00 3.41
1270 1492 3.105187 TCGCTAGCCGACCATAGAA 57.895 52.632 9.66 0.00 41.89 2.10
1300 1522 0.390735 ATGAAACCGACCTACCACGC 60.391 55.000 0.00 0.00 0.00 5.34
1363 1585 3.189080 TGAGTGTGCAATGCAAGTATCAC 59.811 43.478 10.44 13.50 41.47 3.06
1368 1590 2.026641 AGTTGAGTGTGCAATGCAAGT 58.973 42.857 10.44 3.39 41.47 3.16
1369 1591 2.787601 AGTTGAGTGTGCAATGCAAG 57.212 45.000 10.44 0.00 41.47 4.01
1370 1592 3.523606 AAAGTTGAGTGTGCAATGCAA 57.476 38.095 10.44 0.00 41.47 4.08
1372 1594 4.984161 ACAATAAAGTTGAGTGTGCAATGC 59.016 37.500 0.00 0.00 0.00 3.56
1373 1595 7.138081 TGTACAATAAAGTTGAGTGTGCAATG 58.862 34.615 8.89 0.00 32.89 2.82
1374 1596 7.270757 TGTACAATAAAGTTGAGTGTGCAAT 57.729 32.000 8.89 0.00 32.89 3.56
1375 1597 6.685527 TGTACAATAAAGTTGAGTGTGCAA 57.314 33.333 8.89 0.00 32.89 4.08
1377 1599 8.574196 AAAATGTACAATAAAGTTGAGTGTGC 57.426 30.769 3.48 2.84 0.00 4.57
1378 1600 9.950680 AGAAAATGTACAATAAAGTTGAGTGTG 57.049 29.630 3.48 0.00 0.00 3.82
1390 1612 9.213799 GCCCATTTCAAAAGAAAATGTACAATA 57.786 29.630 0.00 0.00 40.77 1.90
1391 1613 7.938490 AGCCCATTTCAAAAGAAAATGTACAAT 59.062 29.630 0.00 0.00 40.77 2.71
1392 1614 7.278875 AGCCCATTTCAAAAGAAAATGTACAA 58.721 30.769 0.00 0.00 40.77 2.41
1393 1615 6.825610 AGCCCATTTCAAAAGAAAATGTACA 58.174 32.000 0.00 0.00 40.77 2.90
1394 1616 6.368791 GGAGCCCATTTCAAAAGAAAATGTAC 59.631 38.462 7.55 0.00 40.77 2.90
1395 1617 6.042552 TGGAGCCCATTTCAAAAGAAAATGTA 59.957 34.615 7.55 0.00 40.77 2.29
1396 1618 5.163216 TGGAGCCCATTTCAAAAGAAAATGT 60.163 36.000 7.55 0.00 40.77 2.71
1421 1643 9.214957 TCTAATGCAAGAAAAAGATCGACTAAA 57.785 29.630 0.00 0.00 0.00 1.85
1426 1648 5.867174 TCGTCTAATGCAAGAAAAAGATCGA 59.133 36.000 0.00 0.00 0.00 3.59
1434 1656 4.265904 TCAGGTCGTCTAATGCAAGAAA 57.734 40.909 0.00 0.00 0.00 2.52
1463 1685 1.665679 GCACTGACACCAACATATCCG 59.334 52.381 0.00 0.00 0.00 4.18
1465 1687 2.991250 AGGCACTGACACCAACATATC 58.009 47.619 0.00 0.00 37.18 1.63
1519 1741 0.112218 CCCTGTCCCATGACACCAAA 59.888 55.000 0.00 0.00 46.40 3.28
1530 1752 1.613630 TCCTCTTCTGCCCTGTCCC 60.614 63.158 0.00 0.00 0.00 4.46
1613 1835 3.054802 CAGAGCTCCCAACTTCCATAACT 60.055 47.826 10.93 0.00 0.00 2.24
1822 2044 5.806654 AAACCCAAATTCAATACACAGCT 57.193 34.783 0.00 0.00 0.00 4.24
2166 2388 8.019656 ACAAGTAAACCTCATATACACCTAGG 57.980 38.462 7.41 7.41 0.00 3.02
2209 2431 4.253685 TCTTCTAACTCAAATTCAGGGCG 58.746 43.478 0.00 0.00 0.00 6.13
2226 2453 7.015682 TGGAAGACTAACAAGATCAGTTCTTCT 59.984 37.037 19.58 14.14 42.98 2.85
2241 2468 4.394729 TCCACCAAACATGGAAGACTAAC 58.605 43.478 1.10 0.00 43.43 2.34
2261 2488 6.817765 TTGGTTCATTCAAGAATACTGTCC 57.182 37.500 0.00 0.00 0.00 4.02
2262 2489 7.820648 ACATTGGTTCATTCAAGAATACTGTC 58.179 34.615 0.00 0.00 0.00 3.51
2389 2617 5.411669 ACCTTTTCCAATTACGTCTCATGAC 59.588 40.000 0.00 0.00 39.70 3.06
2391 2619 5.391950 CCACCTTTTCCAATTACGTCTCATG 60.392 44.000 0.00 0.00 0.00 3.07
2398 2626 3.934457 AAGCCACCTTTTCCAATTACG 57.066 42.857 0.00 0.00 0.00 3.18
2411 2639 2.742589 GCTCTGTAGTTTGTAAGCCACC 59.257 50.000 0.00 0.00 0.00 4.61
2432 2660 3.689161 TGGTAAGAATTCAGTGAATGGCG 59.311 43.478 18.94 0.00 32.14 5.69
2476 2704 4.079253 GGATATCCAACAAACCACAGTGT 58.921 43.478 17.34 0.00 35.64 3.55
2511 2739 3.222603 CCCTTACTGTTCTTTTGTGCCT 58.777 45.455 0.00 0.00 0.00 4.75
2524 2752 8.801882 TTTATTGTATTCAAGTCCCCTTACTG 57.198 34.615 0.00 0.00 36.97 2.74
2564 2792 3.203716 CGTTAAATAGGCCTCCCTCAAC 58.796 50.000 9.68 7.81 41.75 3.18
2574 2802 2.159296 CCTTTGCCCACGTTAAATAGGC 60.159 50.000 0.00 0.00 44.13 3.93
2655 2883 0.467290 AACCATTCAACCGTGTGCCT 60.467 50.000 0.00 0.00 0.00 4.75
2656 2884 0.039527 GAACCATTCAACCGTGTGCC 60.040 55.000 0.00 0.00 0.00 5.01
2678 2906 0.035915 GAGTGACTTCCTTCTGCCCC 60.036 60.000 0.00 0.00 0.00 5.80
2717 2945 9.937175 GTCTTGCCTAACAGATTTCAATATAAC 57.063 33.333 0.00 0.00 0.00 1.89
2722 2950 8.757982 ATATGTCTTGCCTAACAGATTTCAAT 57.242 30.769 0.00 0.00 0.00 2.57
2776 3004 1.717791 CCGCATCATGGTGACGCATT 61.718 55.000 11.02 0.00 34.94 3.56
2781 3009 0.659427 CATGTCCGCATCATGGTGAC 59.341 55.000 11.02 0.00 38.97 3.67
2798 3027 9.206870 CCTTATTAAACAATGACAAAGTTGCAT 57.793 29.630 0.00 0.00 0.00 3.96
2886 3116 7.364200 TGTTGTTATGGTTCCAAAGAATAACG 58.636 34.615 0.00 0.00 31.75 3.18
2887 3117 9.535878 TTTGTTGTTATGGTTCCAAAGAATAAC 57.464 29.630 0.00 6.45 33.67 1.89
2947 3237 1.875514 TGTGCTGTCTGCTGTGAAATC 59.124 47.619 3.20 0.00 43.37 2.17
2948 3238 1.971481 TGTGCTGTCTGCTGTGAAAT 58.029 45.000 3.20 0.00 43.37 2.17
2949 3239 1.401552 GTTGTGCTGTCTGCTGTGAAA 59.598 47.619 3.20 0.00 43.37 2.69
2952 3242 0.949397 ATGTTGTGCTGTCTGCTGTG 59.051 50.000 3.20 0.00 43.37 3.66
2953 3243 1.202734 AGATGTTGTGCTGTCTGCTGT 60.203 47.619 3.20 0.00 43.37 4.40
2954 3244 1.197036 CAGATGTTGTGCTGTCTGCTG 59.803 52.381 3.20 0.00 43.37 4.41
2955 3245 1.071228 TCAGATGTTGTGCTGTCTGCT 59.929 47.619 3.20 0.00 43.37 4.24
2956 3246 1.516161 TCAGATGTTGTGCTGTCTGC 58.484 50.000 0.00 0.00 38.32 4.26
2957 3247 4.761235 ATTTCAGATGTTGTGCTGTCTG 57.239 40.909 0.00 0.00 39.47 3.51
2958 3248 4.022589 CCAATTTCAGATGTTGTGCTGTCT 60.023 41.667 0.00 0.00 33.90 3.41
2959 3249 4.232221 CCAATTTCAGATGTTGTGCTGTC 58.768 43.478 0.00 0.00 33.90 3.51
3004 3294 5.163513 GTCAACATCATGACCAAATGGAAC 58.836 41.667 6.42 0.78 43.11 3.62
3022 3312 4.264543 CATAGAAATGCGTCCAGTCAAC 57.735 45.455 0.00 0.00 0.00 3.18
3192 3483 0.392060 CTGTGTCCATAGCAGCTGCA 60.392 55.000 38.24 24.73 45.16 4.41
3219 3510 7.251704 AGAAAGAATGTGCATAAATACCTCG 57.748 36.000 0.00 0.00 0.00 4.63
3228 3519 8.579850 ACCAAGAAATAGAAAGAATGTGCATA 57.420 30.769 0.00 0.00 0.00 3.14
3356 3648 3.510719 GCAATCTGCGAATAAAAAGCCA 58.489 40.909 0.00 0.00 31.71 4.75
3388 3680 2.758979 ACTTACACCCTAGATGACCACG 59.241 50.000 0.00 0.00 0.00 4.94
3416 3709 8.711457 GCTTACATCTTGCATAAAACAAACAAT 58.289 29.630 0.00 0.00 0.00 2.71
3417 3710 7.708322 TGCTTACATCTTGCATAAAACAAACAA 59.292 29.630 0.00 0.00 0.00 2.83
3422 3715 8.049655 TGTATGCTTACATCTTGCATAAAACA 57.950 30.769 8.29 3.52 46.72 2.83
3538 3831 7.406031 ACGATTGGACTTACTAGATCTTTCA 57.594 36.000 0.00 0.00 0.00 2.69
3550 3843 6.371278 ACCTCTCCTAATACGATTGGACTTA 58.629 40.000 0.00 0.00 0.00 2.24
3558 3851 4.828387 GTCTCCAACCTCTCCTAATACGAT 59.172 45.833 0.00 0.00 0.00 3.73
3559 3852 4.205587 GTCTCCAACCTCTCCTAATACGA 58.794 47.826 0.00 0.00 0.00 3.43
3560 3853 3.318557 GGTCTCCAACCTCTCCTAATACG 59.681 52.174 0.00 0.00 45.45 3.06
3561 3854 4.940905 GGTCTCCAACCTCTCCTAATAC 57.059 50.000 0.00 0.00 45.45 1.89
3604 3902 3.325870 CTGACGTGCTGAAGATAACCAA 58.674 45.455 0.00 0.00 0.00 3.67
3640 3939 2.021723 GCTGGTGGTGTGAACCTTGAA 61.022 52.381 0.00 0.00 38.60 2.69
3698 3997 3.565902 TCAGGTCGCAGTATAGATCTGTG 59.434 47.826 5.18 0.00 43.88 3.66
3702 4001 4.218635 TGGATTCAGGTCGCAGTATAGATC 59.781 45.833 0.00 0.00 0.00 2.75
3712 4011 1.667724 CACATTCTGGATTCAGGTCGC 59.332 52.381 0.00 0.00 41.23 5.19
3719 4018 5.824904 AACAGTATGCACATTCTGGATTC 57.175 39.130 17.94 0.00 42.53 2.52
3732 4031 5.465390 TCACACACAAGAGTTAACAGTATGC 59.535 40.000 8.61 0.00 42.53 3.14
3744 4043 2.158900 ACCTTCCTGTCACACACAAGAG 60.159 50.000 0.00 0.00 33.31 2.85
3768 4067 3.961480 TTGTGTCAGTGCTACTGCTAT 57.039 42.857 10.36 0.00 45.54 2.97
3801 4100 2.896685 TGTTATTTTGCTTCCCCACAGG 59.103 45.455 0.00 0.00 0.00 4.00
3858 4157 3.052082 CTTCACCACTGCGCCAGG 61.052 66.667 4.18 6.64 35.51 4.45
3859 4158 2.281070 ACTTCACCACTGCGCCAG 60.281 61.111 4.18 4.99 37.52 4.85
3860 4159 2.280797 GACTTCACCACTGCGCCA 60.281 61.111 4.18 0.00 0.00 5.69
3861 4160 3.050275 GGACTTCACCACTGCGCC 61.050 66.667 4.18 0.00 0.00 6.53
3862 4161 2.029844 GAGGACTTCACCACTGCGC 61.030 63.158 0.00 0.00 0.00 6.09
3863 4162 1.374758 GGAGGACTTCACCACTGCG 60.375 63.158 0.00 0.00 0.00 5.18
3864 4163 1.003233 GGGAGGACTTCACCACTGC 60.003 63.158 0.00 0.00 0.00 4.40
3870 4169 0.765510 ACAAGTGGGGAGGACTTCAC 59.234 55.000 0.00 0.00 31.05 3.18
3871 4170 0.764890 CACAAGTGGGGAGGACTTCA 59.235 55.000 0.00 0.00 31.05 3.02
3872 4171 0.606673 GCACAAGTGGGGAGGACTTC 60.607 60.000 2.00 0.00 31.05 3.01
3873 4172 1.456287 GCACAAGTGGGGAGGACTT 59.544 57.895 2.00 0.00 33.82 3.01
3874 4173 2.529744 GGCACAAGTGGGGAGGACT 61.530 63.158 2.00 0.00 0.00 3.85
3875 4174 2.034221 GGCACAAGTGGGGAGGAC 59.966 66.667 2.00 0.00 0.00 3.85
3876 4175 2.449518 TGGCACAAGTGGGGAGGA 60.450 61.111 2.00 0.00 31.92 3.71
3887 4186 0.181587 TCCGAAAACCTCTTGGCACA 59.818 50.000 0.00 0.00 36.63 4.57
3888 4187 0.591659 GTCCGAAAACCTCTTGGCAC 59.408 55.000 0.00 0.00 36.63 5.01
3889 4188 0.536460 GGTCCGAAAACCTCTTGGCA 60.536 55.000 0.00 0.00 36.32 4.92
3890 4189 0.536460 TGGTCCGAAAACCTCTTGGC 60.536 55.000 3.74 0.00 40.20 4.52
3891 4190 1.523758 CTGGTCCGAAAACCTCTTGG 58.476 55.000 3.74 0.00 40.20 3.61
3892 4191 0.875059 GCTGGTCCGAAAACCTCTTG 59.125 55.000 3.74 0.00 40.20 3.02
3893 4192 0.250770 GGCTGGTCCGAAAACCTCTT 60.251 55.000 3.74 0.00 40.20 2.85
3894 4193 1.128188 AGGCTGGTCCGAAAACCTCT 61.128 55.000 0.00 0.00 40.20 3.69
3895 4194 0.673956 GAGGCTGGTCCGAAAACCTC 60.674 60.000 0.00 0.00 40.20 3.85
3896 4195 1.128188 AGAGGCTGGTCCGAAAACCT 61.128 55.000 0.00 0.00 40.20 3.50
3897 4196 0.673956 GAGAGGCTGGTCCGAAAACC 60.674 60.000 0.00 0.00 40.77 3.27
3898 4197 0.321996 AGAGAGGCTGGTCCGAAAAC 59.678 55.000 0.00 0.00 40.77 2.43
3899 4198 0.321671 CAGAGAGGCTGGTCCGAAAA 59.678 55.000 0.00 0.00 41.07 2.29
3900 4199 1.975327 CAGAGAGGCTGGTCCGAAA 59.025 57.895 0.00 0.00 41.07 3.46
3901 4200 2.650116 GCAGAGAGGCTGGTCCGAA 61.650 63.158 0.00 0.00 45.03 4.30
3902 4201 3.071206 GCAGAGAGGCTGGTCCGA 61.071 66.667 0.00 0.00 45.03 4.55
3903 4202 2.249413 AATGCAGAGAGGCTGGTCCG 62.249 60.000 0.00 0.00 45.03 4.79
3904 4203 0.747283 CAATGCAGAGAGGCTGGTCC 60.747 60.000 0.00 0.00 45.03 4.46
3905 4204 1.375098 GCAATGCAGAGAGGCTGGTC 61.375 60.000 0.00 0.00 45.03 4.02
3906 4205 1.378250 GCAATGCAGAGAGGCTGGT 60.378 57.895 0.00 0.00 45.03 4.00
3907 4206 1.378119 TGCAATGCAGAGAGGCTGG 60.378 57.895 2.72 0.00 45.03 4.85
3909 4208 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.000 8.73 0.00 40.08 4.58
3910 4209 0.886563 AAAGTGCAATGCAGAGAGGC 59.113 50.000 8.73 0.00 40.08 4.70
3911 4210 1.402456 GCAAAGTGCAATGCAGAGAGG 60.402 52.381 8.73 0.00 44.26 3.69
3912 4211 1.978542 GCAAAGTGCAATGCAGAGAG 58.021 50.000 8.73 0.33 44.26 3.20
3923 4222 0.881796 GTCTTACCCCTGCAAAGTGC 59.118 55.000 0.00 0.00 45.29 4.40
3924 4223 2.568623 AGTCTTACCCCTGCAAAGTG 57.431 50.000 0.00 0.00 0.00 3.16
3925 4224 2.572104 CCTAGTCTTACCCCTGCAAAGT 59.428 50.000 0.00 0.00 0.00 2.66
3926 4225 2.572104 ACCTAGTCTTACCCCTGCAAAG 59.428 50.000 0.00 0.00 0.00 2.77
3927 4226 2.627933 ACCTAGTCTTACCCCTGCAAA 58.372 47.619 0.00 0.00 0.00 3.68
3928 4227 2.337359 ACCTAGTCTTACCCCTGCAA 57.663 50.000 0.00 0.00 0.00 4.08
3929 4228 2.337359 AACCTAGTCTTACCCCTGCA 57.663 50.000 0.00 0.00 0.00 4.41
3930 4229 3.372897 AGTAACCTAGTCTTACCCCTGC 58.627 50.000 4.63 0.00 0.00 4.85
3931 4230 8.953223 ATTATAGTAACCTAGTCTTACCCCTG 57.047 38.462 4.63 0.00 0.00 4.45
3932 4231 8.176105 GGATTATAGTAACCTAGTCTTACCCCT 58.824 40.741 4.63 0.00 0.00 4.79
3933 4232 7.398618 GGGATTATAGTAACCTAGTCTTACCCC 59.601 44.444 0.00 0.00 0.00 4.95
3934 4233 8.176105 AGGGATTATAGTAACCTAGTCTTACCC 58.824 40.741 0.00 0.00 0.00 3.69
3935 4234 9.241919 GAGGGATTATAGTAACCTAGTCTTACC 57.758 40.741 4.63 0.00 0.00 2.85
3936 4235 9.241919 GGAGGGATTATAGTAACCTAGTCTTAC 57.758 40.741 0.00 0.00 0.00 2.34
3937 4236 8.397172 GGGAGGGATTATAGTAACCTAGTCTTA 58.603 40.741 0.00 0.00 0.00 2.10
3938 4237 7.247500 GGGAGGGATTATAGTAACCTAGTCTT 58.753 42.308 0.00 0.00 0.00 3.01
3939 4238 6.240822 GGGGAGGGATTATAGTAACCTAGTCT 60.241 46.154 0.00 0.00 0.00 3.24
3940 4239 5.957168 GGGGAGGGATTATAGTAACCTAGTC 59.043 48.000 0.00 0.00 0.00 2.59
3941 4240 5.380819 TGGGGAGGGATTATAGTAACCTAGT 59.619 44.000 0.00 0.00 0.00 2.57
3942 4241 5.912103 TGGGGAGGGATTATAGTAACCTAG 58.088 45.833 0.00 0.00 0.00 3.02
3943 4242 5.622642 TCTGGGGAGGGATTATAGTAACCTA 59.377 44.000 0.00 0.00 0.00 3.08
3944 4243 4.426023 TCTGGGGAGGGATTATAGTAACCT 59.574 45.833 0.00 0.00 0.00 3.50
3945 4244 4.531339 GTCTGGGGAGGGATTATAGTAACC 59.469 50.000 0.00 0.00 0.00 2.85
3946 4245 4.531339 GGTCTGGGGAGGGATTATAGTAAC 59.469 50.000 0.00 0.00 0.00 2.50
3947 4246 4.451760 GGGTCTGGGGAGGGATTATAGTAA 60.452 50.000 0.00 0.00 0.00 2.24
3948 4247 3.078612 GGGTCTGGGGAGGGATTATAGTA 59.921 52.174 0.00 0.00 0.00 1.82
3949 4248 2.157989 GGGTCTGGGGAGGGATTATAGT 60.158 54.545 0.00 0.00 0.00 2.12
3950 4249 2.552367 GGGTCTGGGGAGGGATTATAG 58.448 57.143 0.00 0.00 0.00 1.31
3951 4250 1.153565 GGGGTCTGGGGAGGGATTATA 59.846 57.143 0.00 0.00 0.00 0.98
3952 4251 0.103876 GGGGTCTGGGGAGGGATTAT 60.104 60.000 0.00 0.00 0.00 1.28
3953 4252 1.320512 GGGGTCTGGGGAGGGATTA 59.679 63.158 0.00 0.00 0.00 1.75
3954 4253 2.044620 GGGGTCTGGGGAGGGATT 59.955 66.667 0.00 0.00 0.00 3.01
3955 4254 3.300962 TGGGGTCTGGGGAGGGAT 61.301 66.667 0.00 0.00 0.00 3.85
3956 4255 4.348495 GTGGGGTCTGGGGAGGGA 62.348 72.222 0.00 0.00 0.00 4.20
3958 4257 3.891432 AAGGTGGGGTCTGGGGAGG 62.891 68.421 0.00 0.00 0.00 4.30
3959 4258 2.204151 AAGGTGGGGTCTGGGGAG 60.204 66.667 0.00 0.00 0.00 4.30
3960 4259 2.531685 CAAGGTGGGGTCTGGGGA 60.532 66.667 0.00 0.00 0.00 4.81
3961 4260 2.858974 ACAAGGTGGGGTCTGGGG 60.859 66.667 0.00 0.00 0.00 4.96
3962 4261 2.436109 CACAAGGTGGGGTCTGGG 59.564 66.667 0.00 0.00 0.00 4.45
3963 4262 1.228245 CACACAAGGTGGGGTCTGG 60.228 63.158 1.07 0.00 44.04 3.86
3964 4263 0.250467 CTCACACAAGGTGGGGTCTG 60.250 60.000 0.00 0.00 44.70 3.51
3965 4264 2.145865 CTCACACAAGGTGGGGTCT 58.854 57.895 0.00 0.00 44.70 3.85
3966 4265 4.800554 CTCACACAAGGTGGGGTC 57.199 61.111 0.00 0.00 44.70 4.46
3972 4271 3.618507 GCATAGAAGCTCTCACACAAGGT 60.619 47.826 0.00 0.00 0.00 3.50
3973 4272 2.935201 GCATAGAAGCTCTCACACAAGG 59.065 50.000 0.00 0.00 0.00 3.61
3974 4273 3.370366 GTGCATAGAAGCTCTCACACAAG 59.630 47.826 0.00 0.00 34.99 3.16
3975 4274 3.007290 AGTGCATAGAAGCTCTCACACAA 59.993 43.478 0.00 0.00 33.44 3.33
3976 4275 2.564504 AGTGCATAGAAGCTCTCACACA 59.435 45.455 0.00 0.00 33.44 3.72
3977 4276 2.928757 CAGTGCATAGAAGCTCTCACAC 59.071 50.000 0.00 0.00 36.31 3.82
3978 4277 2.093816 CCAGTGCATAGAAGCTCTCACA 60.094 50.000 0.00 0.00 36.31 3.58
3979 4278 2.548875 CCAGTGCATAGAAGCTCTCAC 58.451 52.381 0.00 0.00 36.31 3.51
3980 4279 1.483827 CCCAGTGCATAGAAGCTCTCA 59.516 52.381 0.00 0.00 36.31 3.27
3981 4280 1.484240 ACCCAGTGCATAGAAGCTCTC 59.516 52.381 0.00 0.00 36.31 3.20
3982 4281 1.484240 GACCCAGTGCATAGAAGCTCT 59.516 52.381 0.00 0.00 38.75 4.09
3983 4282 1.484240 AGACCCAGTGCATAGAAGCTC 59.516 52.381 0.00 0.00 34.99 4.09
3984 4283 1.209019 CAGACCCAGTGCATAGAAGCT 59.791 52.381 0.00 0.00 34.99 3.74
3985 4284 1.065854 ACAGACCCAGTGCATAGAAGC 60.066 52.381 0.00 0.00 0.00 3.86
3986 4285 2.419297 GGACAGACCCAGTGCATAGAAG 60.419 54.545 0.00 0.00 0.00 2.85
3987 4286 1.555075 GGACAGACCCAGTGCATAGAA 59.445 52.381 0.00 0.00 0.00 2.10
3988 4287 1.195115 GGACAGACCCAGTGCATAGA 58.805 55.000 0.00 0.00 0.00 1.98
3989 4288 1.198713 AGGACAGACCCAGTGCATAG 58.801 55.000 0.00 0.00 40.05 2.23
3990 4289 1.656587 AAGGACAGACCCAGTGCATA 58.343 50.000 0.00 0.00 40.05 3.14
3991 4290 0.773644 AAAGGACAGACCCAGTGCAT 59.226 50.000 0.00 0.00 40.05 3.96
3992 4291 0.550914 AAAAGGACAGACCCAGTGCA 59.449 50.000 0.00 0.00 40.05 4.57
3993 4292 1.692411 AAAAAGGACAGACCCAGTGC 58.308 50.000 0.00 0.00 40.05 4.40
4014 4313 9.661563 AAGCACATGTTTTCAATTATTCATGAT 57.338 25.926 0.00 0.00 36.95 2.45
4015 4314 8.927721 CAAGCACATGTTTTCAATTATTCATGA 58.072 29.630 0.00 0.00 36.95 3.07
4016 4315 8.172484 CCAAGCACATGTTTTCAATTATTCATG 58.828 33.333 0.00 0.00 38.65 3.07
4017 4316 7.334921 CCCAAGCACATGTTTTCAATTATTCAT 59.665 33.333 0.00 0.00 0.00 2.57
4018 4317 6.649973 CCCAAGCACATGTTTTCAATTATTCA 59.350 34.615 0.00 0.00 0.00 2.57
4019 4318 6.873076 TCCCAAGCACATGTTTTCAATTATTC 59.127 34.615 0.00 0.00 0.00 1.75
4020 4319 6.767456 TCCCAAGCACATGTTTTCAATTATT 58.233 32.000 0.00 0.00 0.00 1.40
4021 4320 6.357579 TCCCAAGCACATGTTTTCAATTAT 57.642 33.333 0.00 0.00 0.00 1.28
4022 4321 5.798125 TCCCAAGCACATGTTTTCAATTA 57.202 34.783 0.00 0.00 0.00 1.40
4023 4322 4.686191 TCCCAAGCACATGTTTTCAATT 57.314 36.364 0.00 0.00 0.00 2.32
4024 4323 4.895668 ATCCCAAGCACATGTTTTCAAT 57.104 36.364 0.00 0.00 0.00 2.57
4025 4324 4.344679 AGAATCCCAAGCACATGTTTTCAA 59.655 37.500 0.00 0.00 0.00 2.69
4026 4325 3.896888 AGAATCCCAAGCACATGTTTTCA 59.103 39.130 0.00 0.00 0.00 2.69
4027 4326 4.525912 AGAATCCCAAGCACATGTTTTC 57.474 40.909 0.00 0.00 0.00 2.29
4028 4327 6.418057 TTTAGAATCCCAAGCACATGTTTT 57.582 33.333 0.00 0.00 0.00 2.43
4029 4328 6.438425 AGATTTAGAATCCCAAGCACATGTTT 59.562 34.615 0.00 0.00 0.00 2.83
4030 4329 5.954150 AGATTTAGAATCCCAAGCACATGTT 59.046 36.000 0.00 0.00 0.00 2.71
4031 4330 5.359009 CAGATTTAGAATCCCAAGCACATGT 59.641 40.000 0.00 0.00 0.00 3.21
4032 4331 5.735354 GCAGATTTAGAATCCCAAGCACATG 60.735 44.000 0.00 0.00 0.00 3.21
4033 4332 4.340381 GCAGATTTAGAATCCCAAGCACAT 59.660 41.667 0.00 0.00 0.00 3.21
4042 4341 4.614946 GTTGCATGGCAGATTTAGAATCC 58.385 43.478 0.00 0.00 40.61 3.01
4068 4367 8.498054 TTTCTGAATCATCCTTCAACATAGAC 57.502 34.615 0.00 0.00 34.86 2.59
4072 4371 9.471702 AACTATTTCTGAATCATCCTTCAACAT 57.528 29.630 0.00 0.00 34.86 2.71
4073 4372 8.733458 CAACTATTTCTGAATCATCCTTCAACA 58.267 33.333 0.00 0.00 34.86 3.33
4074 4373 7.699812 GCAACTATTTCTGAATCATCCTTCAAC 59.300 37.037 0.00 0.00 34.86 3.18
4075 4374 7.613022 AGCAACTATTTCTGAATCATCCTTCAA 59.387 33.333 0.00 0.00 34.86 2.69
4203 4504 7.761038 AATCAGCATCATACATGAACATCAT 57.239 32.000 0.00 0.00 40.69 2.45
4230 4531 6.144402 GTGAGACAATGTAGCCAAAATTGTTG 59.856 38.462 6.65 0.00 42.90 3.33
4233 4534 5.860182 CAGTGAGACAATGTAGCCAAAATTG 59.140 40.000 0.00 0.00 37.33 2.32
4237 4538 3.814842 CACAGTGAGACAATGTAGCCAAA 59.185 43.478 0.00 0.00 40.73 3.28
4265 4566 6.903534 ACTATCCCTGTTTCTCTGAAAGGATA 59.096 38.462 13.76 13.76 34.74 2.59
4272 4573 4.081420 GCTTCACTATCCCTGTTTCTCTGA 60.081 45.833 0.00 0.00 0.00 3.27
4327 4628 6.366061 CAGATTTCAACGTGACTGATGAACTA 59.634 38.462 0.00 0.00 31.44 2.24
4394 4695 0.312102 GTGGGAAGCAAAGCACTGAC 59.688 55.000 0.00 0.00 0.00 3.51
4412 4713 4.040952 ACACTATGAGCTGTTCCAAGAAGT 59.959 41.667 0.00 0.00 0.00 3.01
4429 4730 2.935849 CACACACACACACACACACTAT 59.064 45.455 0.00 0.00 0.00 2.12
4430 4731 2.289133 ACACACACACACACACACACTA 60.289 45.455 0.00 0.00 0.00 2.74
4434 4735 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
4435 4736 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
4436 4737 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
4437 4738 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
4444 4745 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
4446 4747 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
4469 4770 0.178924 ATGGGCAGCCCTTTTCACTT 60.179 50.000 31.51 3.21 45.70 3.16
4478 4779 0.468771 AGCTATCAAATGGGCAGCCC 60.469 55.000 25.54 25.54 45.71 5.19
4484 4785 3.438087 CGGCAATCTAGCTATCAAATGGG 59.562 47.826 0.00 0.00 34.17 4.00
4501 4805 2.093341 GGAAGTACCAGATAACCGGCAA 60.093 50.000 0.00 0.00 38.79 4.52
4505 4809 3.700038 ACAGAGGAAGTACCAGATAACCG 59.300 47.826 0.00 0.00 42.04 4.44
4536 4894 9.950496 AGTGTCTGAATGTCTAAAATGTCTTAT 57.050 29.630 0.00 0.00 0.00 1.73
4537 4895 9.208022 CAGTGTCTGAATGTCTAAAATGTCTTA 57.792 33.333 0.00 0.00 32.44 2.10
4538 4896 7.716998 ACAGTGTCTGAATGTCTAAAATGTCTT 59.283 33.333 3.70 0.00 35.18 3.01
4539 4897 7.220030 ACAGTGTCTGAATGTCTAAAATGTCT 58.780 34.615 3.70 0.00 35.18 3.41
4540 4898 7.426929 ACAGTGTCTGAATGTCTAAAATGTC 57.573 36.000 3.70 0.00 35.18 3.06
4541 4899 7.498900 TGAACAGTGTCTGAATGTCTAAAATGT 59.501 33.333 0.00 0.00 35.18 2.71
4542 4900 7.864686 TGAACAGTGTCTGAATGTCTAAAATG 58.135 34.615 0.00 0.00 35.18 2.32
4543 4901 8.345565 GTTGAACAGTGTCTGAATGTCTAAAAT 58.654 33.333 0.00 0.00 35.18 1.82
4544 4902 7.335673 TGTTGAACAGTGTCTGAATGTCTAAAA 59.664 33.333 0.00 0.00 35.18 1.52
4545 4903 6.821160 TGTTGAACAGTGTCTGAATGTCTAAA 59.179 34.615 0.00 0.00 35.18 1.85
4546 4904 6.257849 GTGTTGAACAGTGTCTGAATGTCTAA 59.742 38.462 0.00 0.00 35.18 2.10
4547 4905 5.753438 GTGTTGAACAGTGTCTGAATGTCTA 59.247 40.000 0.00 0.00 35.18 2.59
4548 4906 4.572389 GTGTTGAACAGTGTCTGAATGTCT 59.428 41.667 0.00 0.00 35.18 3.41
4549 4907 4.332543 TGTGTTGAACAGTGTCTGAATGTC 59.667 41.667 0.00 0.00 35.18 3.06
4550 4908 4.260985 TGTGTTGAACAGTGTCTGAATGT 58.739 39.130 0.00 0.00 35.18 2.71
4551 4909 4.880886 TGTGTTGAACAGTGTCTGAATG 57.119 40.909 0.00 0.00 35.18 2.67
4562 4920 4.380023 GGTTGCTTTGTACTGTGTTGAACA 60.380 41.667 0.00 0.00 37.22 3.18
4563 4921 4.102649 GGTTGCTTTGTACTGTGTTGAAC 58.897 43.478 0.00 0.00 0.00 3.18
4564 4922 4.013728 AGGTTGCTTTGTACTGTGTTGAA 58.986 39.130 0.00 0.00 0.00 2.69
4565 4923 3.376859 CAGGTTGCTTTGTACTGTGTTGA 59.623 43.478 0.00 0.00 0.00 3.18
4566 4924 3.128589 ACAGGTTGCTTTGTACTGTGTTG 59.871 43.478 0.00 0.00 40.56 3.33
4567 4925 3.352648 ACAGGTTGCTTTGTACTGTGTT 58.647 40.909 0.00 0.00 40.56 3.32
4568 4926 2.943033 GACAGGTTGCTTTGTACTGTGT 59.057 45.455 0.00 0.00 41.98 3.72
4569 4927 3.002656 CAGACAGGTTGCTTTGTACTGTG 59.997 47.826 0.00 0.00 41.98 3.66
4570 4928 3.118408 TCAGACAGGTTGCTTTGTACTGT 60.118 43.478 0.00 0.00 44.34 3.55
4571 4929 3.466836 TCAGACAGGTTGCTTTGTACTG 58.533 45.455 0.00 0.00 35.40 2.74
4572 4930 3.838244 TCAGACAGGTTGCTTTGTACT 57.162 42.857 0.00 0.00 0.00 2.73
4573 4931 4.598062 GTTTCAGACAGGTTGCTTTGTAC 58.402 43.478 0.00 0.00 0.00 2.90
4574 4932 3.311322 CGTTTCAGACAGGTTGCTTTGTA 59.689 43.478 0.00 0.00 0.00 2.41
4575 4933 2.097466 CGTTTCAGACAGGTTGCTTTGT 59.903 45.455 0.00 0.00 0.00 2.83
4576 4934 2.097466 ACGTTTCAGACAGGTTGCTTTG 59.903 45.455 0.00 0.00 0.00 2.77
4577 4935 2.354821 GACGTTTCAGACAGGTTGCTTT 59.645 45.455 0.00 0.00 0.00 3.51
4578 4936 1.940613 GACGTTTCAGACAGGTTGCTT 59.059 47.619 0.00 0.00 0.00 3.91
4579 4937 1.139058 AGACGTTTCAGACAGGTTGCT 59.861 47.619 0.00 0.00 0.00 3.91
4580 4938 1.583054 AGACGTTTCAGACAGGTTGC 58.417 50.000 0.00 0.00 0.00 4.17
4581 4939 7.416154 TTTATAAGACGTTTCAGACAGGTTG 57.584 36.000 0.00 0.00 0.00 3.77
4582 4940 8.340443 GTTTTTATAAGACGTTTCAGACAGGTT 58.660 33.333 0.00 0.00 0.00 3.50
4583 4941 7.496591 TGTTTTTATAAGACGTTTCAGACAGGT 59.503 33.333 0.00 0.00 0.00 4.00
4584 4942 7.857569 TGTTTTTATAAGACGTTTCAGACAGG 58.142 34.615 0.00 0.00 0.00 4.00
4585 4943 9.710979 TTTGTTTTTATAAGACGTTTCAGACAG 57.289 29.630 0.00 0.00 0.00 3.51
4586 4944 9.493206 GTTTGTTTTTATAAGACGTTTCAGACA 57.507 29.630 0.00 0.00 0.00 3.41
4587 4945 8.667204 CGTTTGTTTTTATAAGACGTTTCAGAC 58.333 33.333 0.00 0.00 0.00 3.51
4588 4946 7.851963 CCGTTTGTTTTTATAAGACGTTTCAGA 59.148 33.333 0.00 0.00 0.00 3.27
4589 4947 7.851963 TCCGTTTGTTTTTATAAGACGTTTCAG 59.148 33.333 0.00 0.00 0.00 3.02
4590 4948 7.692088 TCCGTTTGTTTTTATAAGACGTTTCA 58.308 30.769 0.00 0.00 0.00 2.69
4591 4949 7.321984 CCTCCGTTTGTTTTTATAAGACGTTTC 59.678 37.037 0.00 0.00 0.00 2.78
4592 4950 7.134163 CCTCCGTTTGTTTTTATAAGACGTTT 58.866 34.615 0.00 0.00 0.00 3.60
4593 4951 6.293571 CCCTCCGTTTGTTTTTATAAGACGTT 60.294 38.462 0.00 0.00 0.00 3.99
4594 4952 5.179929 CCCTCCGTTTGTTTTTATAAGACGT 59.820 40.000 0.00 0.00 0.00 4.34
4595 4953 5.409214 TCCCTCCGTTTGTTTTTATAAGACG 59.591 40.000 0.00 0.00 0.00 4.18
4596 4954 6.429078 ACTCCCTCCGTTTGTTTTTATAAGAC 59.571 38.462 0.00 0.00 0.00 3.01
4597 4955 6.536447 ACTCCCTCCGTTTGTTTTTATAAGA 58.464 36.000 0.00 0.00 0.00 2.10
4598 4956 6.812879 ACTCCCTCCGTTTGTTTTTATAAG 57.187 37.500 0.00 0.00 0.00 1.73
4599 4957 7.452562 AGTACTCCCTCCGTTTGTTTTTATAA 58.547 34.615 0.00 0.00 0.00 0.98
4600 4958 7.008021 AGTACTCCCTCCGTTTGTTTTTATA 57.992 36.000 0.00 0.00 0.00 0.98
4601 4959 5.872963 AGTACTCCCTCCGTTTGTTTTTAT 58.127 37.500 0.00 0.00 0.00 1.40
4602 4960 5.294734 AGTACTCCCTCCGTTTGTTTTTA 57.705 39.130 0.00 0.00 0.00 1.52
4603 4961 4.160642 AGTACTCCCTCCGTTTGTTTTT 57.839 40.909 0.00 0.00 0.00 1.94
4604 4962 3.851458 AGTACTCCCTCCGTTTGTTTT 57.149 42.857 0.00 0.00 0.00 2.43
4605 4963 5.012354 TGAATAGTACTCCCTCCGTTTGTTT 59.988 40.000 0.00 0.00 0.00 2.83
4606 4964 4.529377 TGAATAGTACTCCCTCCGTTTGTT 59.471 41.667 0.00 0.00 0.00 2.83
4607 4965 4.091549 TGAATAGTACTCCCTCCGTTTGT 58.908 43.478 0.00 0.00 0.00 2.83
4608 4966 4.730949 TGAATAGTACTCCCTCCGTTTG 57.269 45.455 0.00 0.00 0.00 2.93
4609 4967 5.021458 TCTTGAATAGTACTCCCTCCGTTT 58.979 41.667 0.00 0.00 0.00 3.60
4610 4968 4.607239 TCTTGAATAGTACTCCCTCCGTT 58.393 43.478 0.00 0.00 0.00 4.44
4611 4969 4.246712 TCTTGAATAGTACTCCCTCCGT 57.753 45.455 0.00 0.00 0.00 4.69
4612 4970 5.536916 AGATTCTTGAATAGTACTCCCTCCG 59.463 44.000 0.00 0.00 0.00 4.63
4613 4971 6.325286 ACAGATTCTTGAATAGTACTCCCTCC 59.675 42.308 0.00 0.00 0.00 4.30
4614 4972 7.354751 ACAGATTCTTGAATAGTACTCCCTC 57.645 40.000 0.00 0.00 0.00 4.30
4615 4973 7.560368 CAACAGATTCTTGAATAGTACTCCCT 58.440 38.462 0.00 0.00 0.00 4.20
4616 4974 6.258947 GCAACAGATTCTTGAATAGTACTCCC 59.741 42.308 0.00 0.00 0.00 4.30
4617 4975 6.258947 GGCAACAGATTCTTGAATAGTACTCC 59.741 42.308 0.00 0.00 0.00 3.85
4618 4976 6.818644 TGGCAACAGATTCTTGAATAGTACTC 59.181 38.462 0.00 0.00 46.17 2.59
4619 4977 6.711277 TGGCAACAGATTCTTGAATAGTACT 58.289 36.000 0.00 0.00 46.17 2.73
4620 4978 6.985188 TGGCAACAGATTCTTGAATAGTAC 57.015 37.500 0.00 0.00 46.17 2.73
4653 5011 2.220653 AGCAAGCTGGGCATAAGAAA 57.779 45.000 12.59 0.00 0.00 2.52
4690 5048 8.824781 CCAATGGTGATATATCAATCGAAGATC 58.175 37.037 16.97 1.74 45.12 2.75
4700 5058 3.331591 AGCCTGCCAATGGTGATATATCA 59.668 43.478 11.49 11.49 0.00 2.15
4709 5067 0.469705 TTGTGAAGCCTGCCAATGGT 60.470 50.000 0.00 0.00 0.00 3.55
4712 5070 1.708341 AGTTTGTGAAGCCTGCCAAT 58.292 45.000 0.00 0.00 0.00 3.16
4783 5141 1.649664 CCAGTTCAGCTTCCTCATCG 58.350 55.000 0.00 0.00 0.00 3.84
4836 5194 0.314935 CAACATGTCACAGGGTTGCC 59.685 55.000 11.05 0.00 34.86 4.52
4898 5260 3.089284 CCTATGGTTTTGGGAGTGGTTC 58.911 50.000 0.00 0.00 0.00 3.62
5057 5921 0.321671 TCAGCCCTACTGCAGTTGAC 59.678 55.000 27.06 17.51 46.76 3.18
5148 6012 4.832266 TCATGCCAAAGTGATAACCTTTGT 59.168 37.500 10.84 0.00 44.61 2.83
5302 6167 6.039605 TCAATCAGTGCAAATCAAGACAGAAA 59.960 34.615 0.00 0.00 0.00 2.52
5489 6354 7.339466 ACTGTGATTAGTCCAGAGTTTGTTTTT 59.661 33.333 9.60 0.00 34.99 1.94
5708 6580 1.687368 GGATGGAGCAGCAGGGAAATT 60.687 52.381 0.00 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.