Multiple sequence alignment - TraesCS1D01G104400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G104400 chr1D 100.000 7247 0 0 1 7247 95863090 95870336 0.000000e+00 13383.0
1 TraesCS1D01G104400 chr1D 79.688 576 91 15 28 580 93120997 93120425 6.820000e-105 392.0
2 TraesCS1D01G104400 chr1D 86.834 319 36 5 6815 7128 418193933 418194250 1.160000e-92 351.0
3 TraesCS1D01G104400 chr1D 88.079 151 14 3 6978 7125 7349856 7349707 7.470000e-40 176.0
4 TraesCS1D01G104400 chr1D 92.857 42 3 0 6085 6126 22557790 22557831 2.180000e-05 62.1
5 TraesCS1D01G104400 chr1D 100.000 28 0 0 7176 7203 59964125 59964152 1.300000e-02 52.8
6 TraesCS1D01G104400 chr1D 100.000 28 0 0 5495 5522 432893263 432893236 1.300000e-02 52.8
7 TraesCS1D01G104400 chr1B 96.104 3953 101 23 706 4635 156855758 156851836 0.000000e+00 6397.0
8 TraesCS1D01G104400 chr1B 95.890 1752 41 5 4896 6617 156851612 156849862 0.000000e+00 2808.0
9 TraesCS1D01G104400 chr1B 94.853 272 11 2 6979 7247 156849769 156849498 8.690000e-114 422.0
10 TraesCS1D01G104400 chr1B 88.830 188 18 3 6794 6980 242175998 242176183 2.030000e-55 228.0
11 TraesCS1D01G104400 chr1B 97.674 86 1 1 6736 6820 156849850 156849765 5.860000e-31 147.0
12 TraesCS1D01G104400 chr1A 94.460 1787 91 2 2111 3890 91159707 91161492 0.000000e+00 2745.0
13 TraesCS1D01G104400 chr1A 91.364 1459 64 29 682 2109 91158247 91159674 0.000000e+00 1940.0
14 TraesCS1D01G104400 chr1A 93.413 501 20 7 6119 6617 91162312 91162801 0.000000e+00 730.0
15 TraesCS1D01G104400 chr1A 83.548 620 90 9 2 621 91157541 91158148 2.930000e-158 569.0
16 TraesCS1D01G104400 chr1A 88.493 365 38 3 3967 4328 91161488 91161851 8.630000e-119 438.0
17 TraesCS1D01G104400 chr1A 95.000 220 9 1 5831 6048 91162095 91162314 1.940000e-90 344.0
18 TraesCS1D01G104400 chr1A 95.238 168 8 0 6813 6980 480590365 480590198 4.310000e-67 267.0
19 TraesCS1D01G104400 chr1A 91.558 154 13 0 5519 5672 91161875 91162028 5.700000e-51 213.0
20 TraesCS1D01G104400 chr1A 94.776 134 7 0 5915 6048 459273231 459273364 7.370000e-50 209.0
21 TraesCS1D01G104400 chr1A 96.774 62 1 1 6736 6796 91162823 91162884 1.290000e-17 102.0
22 TraesCS1D01G104400 chr1A 93.023 43 3 0 6081 6123 241319498 241319540 6.070000e-06 63.9
23 TraesCS1D01G104400 chr3D 82.633 881 127 20 2940 3817 223469871 223470728 0.000000e+00 756.0
24 TraesCS1D01G104400 chr3D 81.181 542 88 7 47 579 525920074 525920610 2.420000e-114 424.0
25 TraesCS1D01G104400 chr3D 76.749 486 91 14 87 559 30305134 30304658 1.210000e-62 252.0
26 TraesCS1D01G104400 chr3D 94.815 135 6 1 5915 6048 288550458 288550592 7.370000e-50 209.0
27 TraesCS1D01G104400 chr3D 97.619 42 1 0 3889 3930 273466430 273466389 1.010000e-08 73.1
28 TraesCS1D01G104400 chr3D 100.000 28 0 0 5495 5522 313937603 313937630 1.300000e-02 52.8
29 TraesCS1D01G104400 chr3B 82.633 881 127 18 2940 3817 317625111 317624254 0.000000e+00 756.0
30 TraesCS1D01G104400 chr3B 92.437 119 8 1 6613 6731 728614835 728614952 1.250000e-37 169.0
31 TraesCS1D01G104400 chr3B 93.333 45 3 0 5791 5835 672075553 672075597 4.690000e-07 67.6
32 TraesCS1D01G104400 chr3B 87.931 58 1 3 3889 3942 308385695 308385750 6.070000e-06 63.9
33 TraesCS1D01G104400 chr3A 82.406 881 129 20 2940 3817 283110925 283110068 0.000000e+00 745.0
34 TraesCS1D01G104400 chr3A 88.095 84 6 2 3890 3971 536635309 536635228 5.980000e-16 97.1
35 TraesCS1D01G104400 chr3A 85.333 75 9 1 3899 3971 423489413 423489487 7.800000e-10 76.8
36 TraesCS1D01G104400 chr3A 97.619 42 1 0 3889 3930 357065655 357065614 1.010000e-08 73.1
37 TraesCS1D01G104400 chr6D 81.076 576 87 11 25 580 29379549 29378976 2.400000e-119 440.0
38 TraesCS1D01G104400 chr6D 80.844 569 81 19 28 573 389599305 389598742 8.690000e-114 422.0
39 TraesCS1D01G104400 chr6D 94.253 174 8 2 6808 6980 32865341 32865169 1.550000e-66 265.0
40 TraesCS1D01G104400 chr6D 97.196 107 3 0 6614 6720 249445908 249445802 1.610000e-41 182.0
41 TraesCS1D01G104400 chr6D 91.045 67 6 0 4337 4403 436806458 436806392 2.780000e-14 91.6
42 TraesCS1D01G104400 chr6D 91.045 67 6 0 4338 4404 456766480 456766414 2.780000e-14 91.6
43 TraesCS1D01G104400 chr2D 81.488 551 88 11 39 580 83048722 83048177 2.400000e-119 440.0
44 TraesCS1D01G104400 chr2D 85.032 314 29 11 6811 7117 122864424 122864122 3.290000e-78 303.0
45 TraesCS1D01G104400 chr2D 85.870 184 26 0 6794 6977 4411143 4411326 5.740000e-46 196.0
46 TraesCS1D01G104400 chr2D 93.913 115 7 0 6614 6728 525935523 525935409 2.690000e-39 174.0
47 TraesCS1D01G104400 chr7D 80.179 560 92 11 36 580 617120450 617121005 1.130000e-107 401.0
48 TraesCS1D01G104400 chr7D 77.975 563 97 19 31 578 529946724 529947274 1.950000e-85 327.0
49 TraesCS1D01G104400 chr7D 82.927 287 40 8 297 580 523392064 523391784 4.340000e-62 250.0
50 TraesCS1D01G104400 chr7D 73.638 569 148 2 2939 3506 78040433 78039866 1.220000e-52 219.0
51 TraesCS1D01G104400 chr7D 95.556 135 6 0 5914 6048 34756865 34756999 4.400000e-52 217.0
52 TraesCS1D01G104400 chr7D 82.573 241 28 6 5915 6141 252265058 252265298 4.430000e-47 200.0
53 TraesCS1D01G104400 chr7D 86.250 80 6 4 6047 6121 576296132 576296211 1.680000e-11 82.4
54 TraesCS1D01G104400 chr7D 78.992 119 14 10 5412 5523 125454920 125454806 3.630000e-08 71.3
55 TraesCS1D01G104400 chr7D 97.500 40 1 0 6082 6121 93505426 93505387 1.300000e-07 69.4
56 TraesCS1D01G104400 chr7D 97.297 37 1 0 4344 4380 483205387 483205423 6.070000e-06 63.9
57 TraesCS1D01G104400 chr7D 97.059 34 1 0 7176 7209 64181061 64181028 2.820000e-04 58.4
58 TraesCS1D01G104400 chr7B 78.506 549 95 14 46 580 658234920 658234381 9.010000e-89 339.0
59 TraesCS1D01G104400 chr7B 89.637 193 16 4 6789 6980 355905204 355905015 7.260000e-60 243.0
60 TraesCS1D01G104400 chr7B 73.592 568 150 0 2939 3506 25324036 25323469 1.220000e-52 219.0
61 TraesCS1D01G104400 chr7B 96.296 108 4 0 6613 6720 741544853 741544746 2.080000e-40 178.0
62 TraesCS1D01G104400 chr7B 94.737 114 5 1 6613 6725 420072797 420072684 7.470000e-40 176.0
63 TraesCS1D01G104400 chr7B 93.220 118 6 2 6612 6728 406854701 406854585 9.670000e-39 172.0
64 TraesCS1D01G104400 chr7B 88.710 62 5 2 4344 4404 633109023 633108963 2.800000e-09 75.0
65 TraesCS1D01G104400 chr7B 97.500 40 1 0 6082 6121 46350050 46350011 1.300000e-07 69.4
66 TraesCS1D01G104400 chr7B 95.349 43 2 0 5793 5835 696903153 696903195 1.300000e-07 69.4
67 TraesCS1D01G104400 chr7B 95.455 44 0 2 5793 5835 697229028 697229070 1.300000e-07 69.4
68 TraesCS1D01G104400 chr7B 95.455 44 0 2 5793 5835 697260747 697260789 1.300000e-07 69.4
69 TraesCS1D01G104400 chr7B 92.857 42 3 0 6088 6129 545985246 545985205 2.180000e-05 62.1
70 TraesCS1D01G104400 chr7B 100.000 28 0 0 5495 5522 28510498 28510525 1.300000e-02 52.8
71 TraesCS1D01G104400 chr5A 94.318 176 9 1 6805 6980 382566812 382566638 1.200000e-67 268.0
72 TraesCS1D01G104400 chr5A 87.821 156 13 5 6978 7128 86662018 86662172 2.080000e-40 178.0
73 TraesCS1D01G104400 chr4D 93.443 183 8 4 6801 6980 477898778 477898959 1.200000e-67 268.0
74 TraesCS1D01G104400 chr4D 76.775 521 86 10 92 580 18398721 18398204 7.210000e-65 259.0
75 TraesCS1D01G104400 chr4D 100.000 28 0 0 5495 5522 202801811 202801838 1.300000e-02 52.8
76 TraesCS1D01G104400 chr4A 95.238 168 8 0 6813 6980 362067908 362068075 4.310000e-67 267.0
77 TraesCS1D01G104400 chr4A 94.161 137 8 0 5912 6048 460230804 460230668 7.370000e-50 209.0
78 TraesCS1D01G104400 chr4A 90.345 145 7 6 6990 7128 30742744 30742887 4.470000e-42 183.0
79 TraesCS1D01G104400 chr4A 82.584 178 28 3 5344 5519 455304352 455304528 3.500000e-33 154.0
80 TraesCS1D01G104400 chr2B 92.857 182 11 2 6808 6988 404425922 404425742 5.580000e-66 263.0
81 TraesCS1D01G104400 chr2B 90.566 159 11 4 6795 6951 9619394 9619238 2.650000e-49 207.0
82 TraesCS1D01G104400 chr2B 94.643 112 6 0 6614 6725 770902447 770902336 2.690000e-39 174.0
83 TraesCS1D01G104400 chr2B 93.548 62 4 0 4344 4405 238637780 238637841 7.740000e-15 93.5
84 TraesCS1D01G104400 chr2B 84.270 89 12 1 3889 3975 69342498 69342410 1.300000e-12 86.1
85 TraesCS1D01G104400 chr2B 84.524 84 11 1 3889 3970 707603528 707603445 1.680000e-11 82.4
86 TraesCS1D01G104400 chr2B 91.525 59 2 3 3887 3943 193209934 193209991 2.170000e-10 78.7
87 TraesCS1D01G104400 chr2B 82.927 82 12 2 5442 5522 48217182 48217102 1.010000e-08 73.1
88 TraesCS1D01G104400 chr5B 88.725 204 17 6 6814 7015 295174718 295174917 2.020000e-60 244.0
89 TraesCS1D01G104400 chr5B 88.770 187 20 1 6795 6980 700572800 700572614 2.030000e-55 228.0
90 TraesCS1D01G104400 chr5B 87.368 190 21 3 6793 6980 426874253 426874441 1.580000e-51 215.0
91 TraesCS1D01G104400 chr5B 95.455 110 5 0 6614 6723 679351538 679351647 7.470000e-40 176.0
92 TraesCS1D01G104400 chr5B 95.349 43 2 0 5793 5835 478675897 478675939 1.300000e-07 69.4
93 TraesCS1D01G104400 chr5B 100.000 28 0 0 3905 3932 290386293 290386320 1.300000e-02 52.8
94 TraesCS1D01G104400 chrUn 89.529 191 20 0 6790 6980 91338265 91338455 7.260000e-60 243.0
95 TraesCS1D01G104400 chrUn 94.776 134 7 0 5915 6048 126680478 126680611 7.370000e-50 209.0
96 TraesCS1D01G104400 chr6B 88.718 195 18 4 6789 6981 589314067 589313875 1.220000e-57 235.0
97 TraesCS1D01G104400 chr6B 86.321 212 23 6 6815 7021 8360439 8360229 7.320000e-55 226.0
98 TraesCS1D01G104400 chr6B 88.421 190 15 7 6794 6980 624802036 624802221 9.460000e-54 222.0
99 TraesCS1D01G104400 chr7A 73.462 569 149 2 2939 3506 81500118 81499551 5.700000e-51 213.0
100 TraesCS1D01G104400 chr7A 88.710 62 7 0 4344 4405 520058229 520058290 7.800000e-10 76.8
101 TraesCS1D01G104400 chr7A 97.561 41 1 0 6081 6121 95805260 95805220 3.630000e-08 71.3
102 TraesCS1D01G104400 chr6A 94.776 134 7 0 5915 6048 411770405 411770272 7.370000e-50 209.0
103 TraesCS1D01G104400 chr6A 83.133 83 12 2 5442 5523 472342577 472342496 2.800000e-09 75.0
104 TraesCS1D01G104400 chr6A 95.556 45 2 0 5792 5836 69348488 69348532 1.010000e-08 73.1
105 TraesCS1D01G104400 chr5D 92.029 138 8 2 6990 7124 27353993 27353856 2.670000e-44 191.0
106 TraesCS1D01G104400 chr5D 88.079 151 15 2 6977 7124 164605001 164604851 7.470000e-40 176.0
107 TraesCS1D01G104400 chr5D 88.235 85 8 1 3889 3971 256458043 256458127 4.630000e-17 100.0
108 TraesCS1D01G104400 chr5D 95.652 46 2 0 5791 5836 409938844 409938799 2.800000e-09 75.0
109 TraesCS1D01G104400 chr5D 95.745 47 1 1 5793 5838 418073756 418073710 2.800000e-09 75.0
110 TraesCS1D01G104400 chr2A 94.643 112 6 0 6610 6721 227627422 227627533 2.690000e-39 174.0
111 TraesCS1D01G104400 chr2A 84.706 85 11 1 3889 3971 581960064 581959980 4.660000e-12 84.2
112 TraesCS1D01G104400 chr2A 97.674 43 1 0 4344 4386 5186160 5186202 2.800000e-09 75.0
113 TraesCS1D01G104400 chr2A 90.000 60 2 3 3887 3943 143275792 143275850 2.800000e-09 75.0
114 TraesCS1D01G104400 chr2A 88.525 61 6 1 4344 4404 709176282 709176223 1.010000e-08 73.1
115 TraesCS1D01G104400 chr2A 95.122 41 2 0 3889 3929 86906330 86906290 1.690000e-06 65.8
116 TraesCS1D01G104400 chr4B 81.429 210 29 9 6929 7130 78607819 78607612 5.820000e-36 163.0
117 TraesCS1D01G104400 chr4B 91.489 47 3 1 6077 6123 416642573 416642528 6.070000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G104400 chr1D 95863090 95870336 7246 False 13383.000 13383 100.00000 1 7247 1 chr1D.!!$F3 7246
1 TraesCS1D01G104400 chr1D 93120425 93120997 572 True 392.000 392 79.68800 28 580 1 chr1D.!!$R2 552
2 TraesCS1D01G104400 chr1B 156849498 156855758 6260 True 2443.500 6397 96.13025 706 7247 4 chr1B.!!$R1 6541
3 TraesCS1D01G104400 chr1A 91157541 91162884 5343 False 885.125 2745 91.82625 2 6796 8 chr1A.!!$F3 6794
4 TraesCS1D01G104400 chr3D 223469871 223470728 857 False 756.000 756 82.63300 2940 3817 1 chr3D.!!$F1 877
5 TraesCS1D01G104400 chr3D 525920074 525920610 536 False 424.000 424 81.18100 47 579 1 chr3D.!!$F4 532
6 TraesCS1D01G104400 chr3B 317624254 317625111 857 True 756.000 756 82.63300 2940 3817 1 chr3B.!!$R1 877
7 TraesCS1D01G104400 chr3A 283110068 283110925 857 True 745.000 745 82.40600 2940 3817 1 chr3A.!!$R1 877
8 TraesCS1D01G104400 chr6D 29378976 29379549 573 True 440.000 440 81.07600 25 580 1 chr6D.!!$R1 555
9 TraesCS1D01G104400 chr6D 389598742 389599305 563 True 422.000 422 80.84400 28 573 1 chr6D.!!$R4 545
10 TraesCS1D01G104400 chr2D 83048177 83048722 545 True 440.000 440 81.48800 39 580 1 chr2D.!!$R1 541
11 TraesCS1D01G104400 chr7D 617120450 617121005 555 False 401.000 401 80.17900 36 580 1 chr7D.!!$F6 544
12 TraesCS1D01G104400 chr7D 529946724 529947274 550 False 327.000 327 77.97500 31 578 1 chr7D.!!$F4 547
13 TraesCS1D01G104400 chr7D 78039866 78040433 567 True 219.000 219 73.63800 2939 3506 1 chr7D.!!$R2 567
14 TraesCS1D01G104400 chr7B 658234381 658234920 539 True 339.000 339 78.50600 46 580 1 chr7B.!!$R8 534
15 TraesCS1D01G104400 chr7B 25323469 25324036 567 True 219.000 219 73.59200 2939 3506 1 chr7B.!!$R1 567
16 TraesCS1D01G104400 chr4D 18398204 18398721 517 True 259.000 259 76.77500 92 580 1 chr4D.!!$R1 488
17 TraesCS1D01G104400 chr7A 81499551 81500118 567 True 213.000 213 73.46200 2939 3506 1 chr7A.!!$R1 567

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
920 1035 0.338120 TCCCATTTCCAATCCCCCAC 59.662 55.000 0.0 0.0 0.00 4.61 F
923 1038 0.339510 CATTTCCAATCCCCCACCCT 59.660 55.000 0.0 0.0 0.00 4.34 F
925 1040 0.411848 TTTCCAATCCCCCACCCTTC 59.588 55.000 0.0 0.0 0.00 3.46 F
927 1042 1.935931 CCAATCCCCCACCCTTCCT 60.936 63.158 0.0 0.0 0.00 3.36 F
1814 1958 2.089349 GGTCAAGTCGCTGCTCGTC 61.089 63.158 0.0 0.0 39.67 4.20 F
4421 4625 0.036765 TCAGGAAAACGGACATCGGG 60.037 55.000 0.0 0.0 44.45 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2480 2667 1.265365 GAAAGTGAGCAGTTGCCAGTC 59.735 52.381 0.00 0.00 43.38 3.51 R
2678 2865 2.418368 TGCTCAAATCTATGCCGGTT 57.582 45.000 1.90 0.00 0.00 4.44 R
3543 3730 8.462143 TTGTAAGTAAAGCTCGAGAATAACAG 57.538 34.615 18.75 0.00 0.00 3.16 R
3822 4009 6.531948 CAGGTTCAACTTCTAGTGCATAGTAC 59.468 42.308 0.00 0.00 32.85 2.73 R
4430 4634 1.209640 GAGGTCGTGTCCGTCTGTC 59.790 63.158 0.00 0.00 35.01 3.51 R
6702 6939 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
114 120 1.453928 GGTGGTCTTAGGGCCATGC 60.454 63.158 6.18 0.00 37.09 4.06
152 158 2.190578 CTTGTCGATGGGAGGGCC 59.809 66.667 0.00 0.00 0.00 5.80
245 258 8.213679 CCCTAATGATGAAATAAGGTTCTCTCA 58.786 37.037 0.00 0.00 0.00 3.27
246 259 9.050601 CCTAATGATGAAATAAGGTTCTCTCAC 57.949 37.037 0.00 0.00 0.00 3.51
247 260 9.605275 CTAATGATGAAATAAGGTTCTCTCACA 57.395 33.333 0.00 0.00 0.00 3.58
362 397 6.220201 TCTGTTCGTTGTTCATCTACATTCA 58.780 36.000 0.00 0.00 0.00 2.57
363 398 6.145534 TCTGTTCGTTGTTCATCTACATTCAC 59.854 38.462 0.00 0.00 0.00 3.18
432 482 1.220749 GTGCGCTGGTTCTATGGGA 59.779 57.895 9.73 0.00 0.00 4.37
470 520 4.445452 TCCCGACTGTCAACTACAATAC 57.555 45.455 8.73 0.00 37.74 1.89
477 528 6.295039 ACTGTCAACTACAATACGTTTTGG 57.705 37.500 20.47 8.21 37.74 3.28
479 530 4.817464 TGTCAACTACAATACGTTTTGGCT 59.183 37.500 20.47 5.58 34.29 4.75
484 535 1.960689 ACAATACGTTTTGGCTGGCTT 59.039 42.857 20.47 0.00 0.00 4.35
511 562 2.764128 AGGGACGATGATGGCGGT 60.764 61.111 0.00 0.00 0.00 5.68
566 617 8.231837 GTCATCGTTAGGTAGTCTATGAATCTC 58.768 40.741 0.00 0.00 0.00 2.75
621 672 9.871238 AATATAGTGTCAGAAAACGTCTTACAT 57.129 29.630 0.00 0.00 41.41 2.29
622 673 7.813852 ATAGTGTCAGAAAACGTCTTACATC 57.186 36.000 0.00 0.00 41.41 3.06
629 739 9.035607 GTCAGAAAACGTCTTACATCATATGAT 57.964 33.333 12.62 12.62 32.70 2.45
630 740 9.034544 TCAGAAAACGTCTTACATCATATGATG 57.965 33.333 34.17 34.17 45.19 3.07
642 752 6.364568 CATCATATGATGGAGGGAGTGTTA 57.635 41.667 30.38 0.00 46.09 2.41
655 765 5.070685 AGGGAGTGTTATTTCTTGTGTTCC 58.929 41.667 0.00 0.00 0.00 3.62
660 770 7.227910 GGAGTGTTATTTCTTGTGTTCCTTGTA 59.772 37.037 0.00 0.00 0.00 2.41
661 771 7.927048 AGTGTTATTTCTTGTGTTCCTTGTAC 58.073 34.615 0.00 0.00 0.00 2.90
662 772 7.773690 AGTGTTATTTCTTGTGTTCCTTGTACT 59.226 33.333 0.00 0.00 0.00 2.73
663 773 8.403236 GTGTTATTTCTTGTGTTCCTTGTACTT 58.597 33.333 0.00 0.00 0.00 2.24
664 774 8.402472 TGTTATTTCTTGTGTTCCTTGTACTTG 58.598 33.333 0.00 0.00 0.00 3.16
665 775 8.403236 GTTATTTCTTGTGTTCCTTGTACTTGT 58.597 33.333 0.00 0.00 0.00 3.16
666 776 5.811399 TTCTTGTGTTCCTTGTACTTGTG 57.189 39.130 0.00 0.00 0.00 3.33
667 777 4.839121 TCTTGTGTTCCTTGTACTTGTGT 58.161 39.130 0.00 0.00 0.00 3.72
668 778 5.250200 TCTTGTGTTCCTTGTACTTGTGTT 58.750 37.500 0.00 0.00 0.00 3.32
669 779 5.353123 TCTTGTGTTCCTTGTACTTGTGTTC 59.647 40.000 0.00 0.00 0.00 3.18
670 780 3.942748 TGTGTTCCTTGTACTTGTGTTCC 59.057 43.478 0.00 0.00 0.00 3.62
671 781 4.196971 GTGTTCCTTGTACTTGTGTTCCT 58.803 43.478 0.00 0.00 0.00 3.36
672 782 4.638865 GTGTTCCTTGTACTTGTGTTCCTT 59.361 41.667 0.00 0.00 0.00 3.36
673 783 4.638421 TGTTCCTTGTACTTGTGTTCCTTG 59.362 41.667 0.00 0.00 0.00 3.61
674 784 4.497291 TCCTTGTACTTGTGTTCCTTGT 57.503 40.909 0.00 0.00 0.00 3.16
675 785 5.617528 TCCTTGTACTTGTGTTCCTTGTA 57.382 39.130 0.00 0.00 0.00 2.41
676 786 5.607477 TCCTTGTACTTGTGTTCCTTGTAG 58.393 41.667 0.00 0.00 0.00 2.74
677 787 5.129815 TCCTTGTACTTGTGTTCCTTGTAGT 59.870 40.000 0.00 0.00 0.00 2.73
678 788 5.236478 CCTTGTACTTGTGTTCCTTGTAGTG 59.764 44.000 0.00 0.00 0.00 2.74
679 789 4.124238 TGTACTTGTGTTCCTTGTAGTGC 58.876 43.478 0.00 0.00 0.00 4.40
680 790 2.572290 ACTTGTGTTCCTTGTAGTGCC 58.428 47.619 0.00 0.00 0.00 5.01
698 808 6.855763 AGTGCCATGATGGAAGATTAAAAA 57.144 33.333 17.22 0.00 40.96 1.94
784 899 1.827969 CAGGAGGAAGACCGAGACATT 59.172 52.381 0.00 0.00 41.83 2.71
919 1034 1.062275 CATCCCATTTCCAATCCCCCA 60.062 52.381 0.00 0.00 0.00 4.96
920 1035 0.338120 TCCCATTTCCAATCCCCCAC 59.662 55.000 0.00 0.00 0.00 4.61
923 1038 0.339510 CATTTCCAATCCCCCACCCT 59.660 55.000 0.00 0.00 0.00 4.34
925 1040 0.411848 TTTCCAATCCCCCACCCTTC 59.588 55.000 0.00 0.00 0.00 3.46
927 1042 1.935931 CCAATCCCCCACCCTTCCT 60.936 63.158 0.00 0.00 0.00 3.36
947 1064 3.834056 CTCTCTCCCCCGCCCCTA 61.834 72.222 0.00 0.00 0.00 3.53
1397 1524 6.889722 TGTTTGGTGGAATTTAGGGATAAGAG 59.110 38.462 0.00 0.00 0.00 2.85
1426 1553 4.791334 TGGGTTTCCTTACAAGGGATGATA 59.209 41.667 8.14 0.00 46.47 2.15
1641 1776 2.597510 GCTTCGTGGGTTGCCCTT 60.598 61.111 5.73 0.00 45.70 3.95
1666 1810 2.485657 GCTTGCATCCTTAGGTACTCCC 60.486 54.545 0.00 0.00 41.75 4.30
1723 1867 9.285770 CACTTTAGAACATGTGAATTCATGATG 57.714 33.333 20.72 20.72 45.41 3.07
1814 1958 2.089349 GGTCAAGTCGCTGCTCGTC 61.089 63.158 0.00 0.00 39.67 4.20
1816 1960 3.832171 CAAGTCGCTGCTCGTCGC 61.832 66.667 0.00 0.00 39.67 5.19
2519 2706 7.038659 CACTTTCTGTAGAAGGATCTTGTAGG 58.961 42.308 10.26 0.00 37.10 3.18
2564 2751 2.557056 TCCCGAGCTAATAACATCCTCG 59.443 50.000 0.00 0.00 43.49 4.63
2584 2771 2.424601 CGATTACACCTCCTCCAACGTA 59.575 50.000 0.00 0.00 0.00 3.57
2589 2776 6.639632 TTACACCTCCTCCAACGTATATAC 57.360 41.667 2.53 2.53 0.00 1.47
2621 2808 9.621629 CATTCCACATGTTAACCTAATAACCTA 57.378 33.333 2.48 0.00 35.38 3.08
2655 2842 3.446161 ACATCTTTGATTCACCTGCCATG 59.554 43.478 0.00 0.00 0.00 3.66
2678 2865 4.299586 TCCATCCTAGCAACAATCAACA 57.700 40.909 0.00 0.00 0.00 3.33
2703 2890 5.111293 CCGGCATAGATTTGAGCAAATTTT 58.889 37.500 9.57 4.98 40.77 1.82
2760 2947 9.160412 ACAACCTTTATAGCTCTACCATTCTAT 57.840 33.333 0.00 0.00 0.00 1.98
3080 3267 3.409026 ACTATATGCTTACTGCTGGCC 57.591 47.619 0.00 0.00 43.37 5.36
3543 3730 8.561738 TGAACTCCTGTTATTTTCTGGATTAC 57.438 34.615 0.00 0.00 36.39 1.89
3822 4009 6.644248 TGGCTTCAGATTGGATTCATATTG 57.356 37.500 0.00 0.00 0.00 1.90
3830 4017 9.440773 TCAGATTGGATTCATATTGTACTATGC 57.559 33.333 0.00 0.00 0.00 3.14
3933 4120 6.830114 AAGACGTTTTAGAGACTTGTCAAG 57.170 37.500 11.17 11.17 0.00 3.02
3950 4137 9.262358 ACTTGTCAAGTCTCTAAAATGTCTTAC 57.738 33.333 12.62 0.00 37.02 2.34
4141 4328 1.673993 CACAGTGGGCCGCACATTA 60.674 57.895 20.98 0.00 0.00 1.90
4335 4529 4.577283 TCGGCCAACTATTACATTTTAGCC 59.423 41.667 2.24 0.00 0.00 3.93
4356 4559 0.605319 TTAGGCCAACTCCAACGCAG 60.605 55.000 5.01 0.00 0.00 5.18
4418 4622 1.271163 TGGGTCAGGAAAACGGACATC 60.271 52.381 0.00 0.00 44.76 3.06
4419 4623 1.076332 GGTCAGGAAAACGGACATCG 58.924 55.000 0.00 0.00 44.76 3.84
4420 4624 1.076332 GTCAGGAAAACGGACATCGG 58.924 55.000 0.00 0.00 42.84 4.18
4421 4625 0.036765 TCAGGAAAACGGACATCGGG 60.037 55.000 0.00 0.00 44.45 5.14
4422 4626 0.321298 CAGGAAAACGGACATCGGGT 60.321 55.000 0.00 0.00 44.45 5.28
4423 4627 0.321298 AGGAAAACGGACATCGGGTG 60.321 55.000 0.00 0.00 44.45 4.61
4424 4628 1.500396 GAAAACGGACATCGGGTGC 59.500 57.895 0.00 0.00 44.45 5.01
4441 4645 3.733960 CGAGCGGACAGACGGACA 61.734 66.667 0.00 0.00 0.00 4.02
4442 4646 2.126424 GAGCGGACAGACGGACAC 60.126 66.667 0.00 0.00 0.00 3.67
4451 4655 2.126424 GACGGACACGACCTCTGC 60.126 66.667 0.00 0.00 44.60 4.26
4473 4677 1.508088 CAACGAAGCTGCCCCATTC 59.492 57.895 0.00 0.00 0.00 2.67
4711 4915 3.052082 CCTCTGCTGCCGTGGTTG 61.052 66.667 0.00 0.00 0.00 3.77
4712 4916 2.031012 CTCTGCTGCCGTGGTTGA 59.969 61.111 0.00 0.00 0.00 3.18
4713 4917 2.031012 TCTGCTGCCGTGGTTGAG 59.969 61.111 0.00 0.00 0.00 3.02
4714 4918 3.052082 CTGCTGCCGTGGTTGAGG 61.052 66.667 0.00 0.00 0.00 3.86
4715 4919 3.832237 CTGCTGCCGTGGTTGAGGT 62.832 63.158 0.00 0.00 0.00 3.85
4716 4920 3.357079 GCTGCCGTGGTTGAGGTG 61.357 66.667 0.00 0.00 0.00 4.00
4717 4921 3.357079 CTGCCGTGGTTGAGGTGC 61.357 66.667 0.00 0.00 0.00 5.01
4718 4922 4.182433 TGCCGTGGTTGAGGTGCA 62.182 61.111 0.00 0.00 0.00 4.57
4719 4923 2.904866 GCCGTGGTTGAGGTGCAA 60.905 61.111 0.00 0.00 0.00 4.08
4726 4930 2.712539 TTGAGGTGCAACAACGCG 59.287 55.556 3.64 3.53 39.98 6.01
4727 4931 3.462333 TTGAGGTGCAACAACGCGC 62.462 57.895 5.73 0.00 39.98 6.86
4746 4950 3.998672 GGCCGTGGTTGAGGTCGA 61.999 66.667 0.00 0.00 0.00 4.20
4747 4951 2.737376 GCCGTGGTTGAGGTCGAC 60.737 66.667 7.13 7.13 0.00 4.20
4748 4952 2.732016 CCGTGGTTGAGGTCGACA 59.268 61.111 18.91 0.00 31.82 4.35
4749 4953 1.663702 CCGTGGTTGAGGTCGACAC 60.664 63.158 18.91 11.25 31.82 3.67
4750 4954 1.663702 CGTGGTTGAGGTCGACACC 60.664 63.158 18.91 16.27 44.19 4.16
4751 4955 1.301479 GTGGTTGAGGTCGACACCC 60.301 63.158 18.91 9.31 45.12 4.61
4752 4956 2.048503 GGTTGAGGTCGACACCCG 60.049 66.667 18.91 0.00 45.12 5.28
4753 4957 2.737376 GTTGAGGTCGACACCCGC 60.737 66.667 18.91 2.30 45.12 6.13
4754 4958 3.998672 TTGAGGTCGACACCCGCC 61.999 66.667 18.91 0.00 45.12 6.13
4806 5010 4.864334 CCATGGCACGGGAGGAGC 62.864 72.222 0.00 0.00 0.00 4.70
4860 5064 4.335647 CCTGCCAAGTCCACCGCT 62.336 66.667 0.00 0.00 0.00 5.52
4861 5065 3.052082 CTGCCAAGTCCACCGCTG 61.052 66.667 0.00 0.00 0.00 5.18
4925 5129 3.073735 CCGGCAGCTCTGGTCTCT 61.074 66.667 0.00 0.00 36.43 3.10
4951 5155 3.640257 CTGCTCTGCCCATGGTGCT 62.640 63.158 21.23 0.00 0.00 4.40
4953 5157 2.353958 CTCTGCCCATGGTGCTGT 59.646 61.111 21.23 0.00 0.00 4.40
5249 5453 2.443016 CCGGGGGTGAGAGAGAGG 60.443 72.222 0.00 0.00 0.00 3.69
5286 5490 1.203275 GGTAGGTGGGATAGGTAGGGG 60.203 61.905 0.00 0.00 0.00 4.79
5332 5536 2.341101 AAGCGGACGAGGACGACAT 61.341 57.895 0.00 0.00 42.66 3.06
5334 5538 1.009900 GCGGACGAGGACGACATAG 60.010 63.158 0.00 0.00 42.66 2.23
5344 5548 1.331138 GGACGACATAGACTCTGTCCG 59.669 57.143 13.64 11.37 39.89 4.79
5431 5635 5.457473 CACAAAACGGACAAAACAATAGGAC 59.543 40.000 0.00 0.00 0.00 3.85
5465 5669 3.054802 TGGGCCATTGTTTTTGTCTGTTT 60.055 39.130 0.00 0.00 0.00 2.83
5695 5918 8.918202 ACAATAATTGTAGAAAGAAGACCACA 57.082 30.769 0.00 0.00 43.27 4.17
5718 5941 3.556365 GCTCACTTCGTCTAAATTAGCCC 59.444 47.826 0.00 0.00 0.00 5.19
5731 5954 9.780186 GTCTAAATTAGCCCAGACTACATTAAT 57.220 33.333 0.00 0.00 35.58 1.40
5785 6008 4.095483 CCTGTGATCATCAAAAGCTACCAC 59.905 45.833 0.00 0.00 0.00 4.16
5787 6010 3.684788 GTGATCATCAAAAGCTACCACGT 59.315 43.478 0.00 0.00 0.00 4.49
6073 6298 7.912250 ACTACTTCCGTATCAAAGTGTAATACG 59.088 37.037 7.06 7.06 44.75 3.06
6087 6322 8.782339 AAGTGTAATACGTTTTTGTAGCCTAT 57.218 30.769 0.00 0.00 0.00 2.57
6158 6393 5.513267 GGAGTACTTCACCAGATTTGAACCT 60.513 44.000 0.00 0.00 0.00 3.50
6284 6521 6.401474 CCATTCCTTCAATATTAGCATCGTCG 60.401 42.308 0.00 0.00 0.00 5.12
6617 6854 6.514063 ACCAACTTGTTCTACACTTCTACTC 58.486 40.000 0.00 0.00 0.00 2.59
6618 6855 5.927115 CCAACTTGTTCTACACTTCTACTCC 59.073 44.000 0.00 0.00 0.00 3.85
6619 6856 5.725325 ACTTGTTCTACACTTCTACTCCC 57.275 43.478 0.00 0.00 0.00 4.30
6620 6857 5.395611 ACTTGTTCTACACTTCTACTCCCT 58.604 41.667 0.00 0.00 0.00 4.20
6621 6858 5.477637 ACTTGTTCTACACTTCTACTCCCTC 59.522 44.000 0.00 0.00 0.00 4.30
6622 6859 4.342359 TGTTCTACACTTCTACTCCCTCC 58.658 47.826 0.00 0.00 0.00 4.30
6623 6860 3.278668 TCTACACTTCTACTCCCTCCG 57.721 52.381 0.00 0.00 0.00 4.63
6625 6862 2.305858 ACACTTCTACTCCCTCCGTT 57.694 50.000 0.00 0.00 0.00 4.44
6627 6864 1.477295 CACTTCTACTCCCTCCGTTCC 59.523 57.143 0.00 0.00 0.00 3.62
6628 6865 0.739561 CTTCTACTCCCTCCGTTCCG 59.260 60.000 0.00 0.00 0.00 4.30
6629 6866 0.329261 TTCTACTCCCTCCGTTCCGA 59.671 55.000 0.00 0.00 0.00 4.55
6631 6868 1.064166 TCTACTCCCTCCGTTCCGAAT 60.064 52.381 0.00 0.00 0.00 3.34
6633 6870 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
6634 6871 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
6636 6873 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
6637 6874 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
6638 6875 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
6639 6876 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
6640 6877 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
6641 6878 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
6642 6879 1.722464 CGTTCCGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 35.93 5.10
6643 6880 2.222508 CGTTCCGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 35.93 5.18
6644 6881 2.991190 GTTCCGAATTACTTGTCGCAGA 59.009 45.455 0.00 0.00 35.93 4.26
6645 6882 3.306917 TCCGAATTACTTGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
6646 6883 3.655486 TCCGAATTACTTGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
6647 6884 4.250464 TCCGAATTACTTGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
6648 6885 4.092821 TCCGAATTACTTGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
6649 6886 4.334443 CGAATTACTTGTCGCAGAAATGG 58.666 43.478 0.00 0.00 39.69 3.16
6650 6887 4.092821 CGAATTACTTGTCGCAGAAATGGA 59.907 41.667 0.00 0.00 39.69 3.41
6651 6888 5.220662 CGAATTACTTGTCGCAGAAATGGAT 60.221 40.000 0.00 0.00 39.69 3.41
6652 6889 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
6653 6890 2.783135 ACTTGTCGCAGAAATGGATGT 58.217 42.857 0.00 0.00 39.69 3.06
6654 6891 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
6655 6892 4.517285 ACTTGTCGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
6656 6893 4.572389 ACTTGTCGCAGAAATGGATGTATC 59.428 41.667 0.00 0.00 39.69 2.24
6657 6894 4.406648 TGTCGCAGAAATGGATGTATCT 57.593 40.909 0.00 0.00 39.69 1.98
6658 6895 5.529581 TGTCGCAGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 39.69 1.98
6659 6896 5.532557 TGTCGCAGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 39.69 2.43
6660 6897 5.301805 TGTCGCAGAAATGGATGTATCTAGA 59.698 40.000 0.00 0.00 39.69 2.43
6661 6898 6.183360 TGTCGCAGAAATGGATGTATCTAGAA 60.183 38.462 0.00 0.00 39.69 2.10
6662 6899 6.144724 GTCGCAGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 39.69 3.01
6663 6900 6.040955 TCGCAGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
6664 6901 7.230712 TCGCAGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
6665 6902 7.867909 CGCAGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
6666 6903 9.547753 GCAGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
6693 6930 6.902224 TGTCTACATACATTCATTTCCACG 57.098 37.500 0.00 0.00 0.00 4.94
6694 6931 6.635755 TGTCTACATACATTCATTTCCACGA 58.364 36.000 0.00 0.00 0.00 4.35
6695 6932 7.272244 TGTCTACATACATTCATTTCCACGAT 58.728 34.615 0.00 0.00 0.00 3.73
6696 6933 8.417884 TGTCTACATACATTCATTTCCACGATA 58.582 33.333 0.00 0.00 0.00 2.92
6697 6934 9.256477 GTCTACATACATTCATTTCCACGATAA 57.744 33.333 0.00 0.00 0.00 1.75
6698 6935 9.476202 TCTACATACATTCATTTCCACGATAAG 57.524 33.333 0.00 0.00 0.00 1.73
6699 6936 9.261180 CTACATACATTCATTTCCACGATAAGT 57.739 33.333 0.00 0.00 0.00 2.24
6701 6938 9.607988 ACATACATTCATTTCCACGATAAGTAA 57.392 29.630 0.00 0.00 0.00 2.24
6705 6942 8.621286 ACATTCATTTCCACGATAAGTAATTCC 58.379 33.333 0.00 0.00 0.00 3.01
6706 6943 6.838198 TCATTTCCACGATAAGTAATTCCG 57.162 37.500 0.00 0.00 0.00 4.30
6707 6944 6.575267 TCATTTCCACGATAAGTAATTCCGA 58.425 36.000 4.96 0.00 0.00 4.55
6708 6945 7.042950 TCATTTCCACGATAAGTAATTCCGAA 58.957 34.615 4.96 0.00 0.00 4.30
6709 6946 6.651755 TTTCCACGATAAGTAATTCCGAAC 57.348 37.500 4.96 0.00 0.00 3.95
6710 6947 4.353737 TCCACGATAAGTAATTCCGAACG 58.646 43.478 4.96 0.00 0.00 3.95
6711 6948 3.488310 CCACGATAAGTAATTCCGAACGG 59.512 47.826 6.94 6.94 0.00 4.44
6712 6949 4.353737 CACGATAAGTAATTCCGAACGGA 58.646 43.478 12.04 12.04 43.52 4.69
6713 6950 4.440103 CACGATAAGTAATTCCGAACGGAG 59.560 45.833 15.34 3.62 46.06 4.63
6714 6951 3.979495 CGATAAGTAATTCCGAACGGAGG 59.021 47.826 15.34 0.00 46.06 4.30
6715 6952 2.685850 AAGTAATTCCGAACGGAGGG 57.314 50.000 15.34 0.00 46.06 4.30
6716 6953 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
6717 6954 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
6718 6955 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
6719 6956 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
6720 6957 1.109609 ATTCCGAACGGAGGGAGTAC 58.890 55.000 15.34 0.00 46.06 2.73
6721 6958 0.038744 TTCCGAACGGAGGGAGTACT 59.961 55.000 15.34 0.00 46.06 2.73
6722 6959 0.038744 TCCGAACGGAGGGAGTACTT 59.961 55.000 12.04 0.00 39.76 2.24
6723 6960 1.281867 TCCGAACGGAGGGAGTACTTA 59.718 52.381 12.04 0.00 39.76 2.24
6724 6961 2.092212 TCCGAACGGAGGGAGTACTTAT 60.092 50.000 12.04 0.00 39.76 1.73
6725 6962 2.292845 CCGAACGGAGGGAGTACTTATC 59.707 54.545 7.53 0.00 37.50 1.75
6726 6963 3.212685 CGAACGGAGGGAGTACTTATCT 58.787 50.000 0.00 0.00 0.00 1.98
6727 6964 4.384056 CGAACGGAGGGAGTACTTATCTA 58.616 47.826 0.00 0.00 0.00 1.98
6728 6965 4.213059 CGAACGGAGGGAGTACTTATCTAC 59.787 50.000 0.00 0.00 0.00 2.59
6729 6966 4.785346 ACGGAGGGAGTACTTATCTACA 57.215 45.455 0.00 0.00 0.00 2.74
6730 6967 5.121380 ACGGAGGGAGTACTTATCTACAA 57.879 43.478 0.00 0.00 0.00 2.41
6731 6968 5.703310 ACGGAGGGAGTACTTATCTACAAT 58.297 41.667 0.00 0.00 0.00 2.71
6732 6969 5.769162 ACGGAGGGAGTACTTATCTACAATC 59.231 44.000 0.00 0.00 0.00 2.67
6733 6970 5.768662 CGGAGGGAGTACTTATCTACAATCA 59.231 44.000 0.00 0.00 0.00 2.57
6734 6971 6.264744 CGGAGGGAGTACTTATCTACAATCAA 59.735 42.308 0.00 0.00 0.00 2.57
6811 7049 4.829064 TTTTTGCATGTTCGAGCTACTT 57.171 36.364 0.00 0.00 0.00 2.24
6815 7053 4.655762 TGCATGTTCGAGCTACTTATCT 57.344 40.909 0.00 0.00 0.00 1.98
6816 7054 5.767816 TGCATGTTCGAGCTACTTATCTA 57.232 39.130 0.00 0.00 0.00 1.98
6817 7055 5.520632 TGCATGTTCGAGCTACTTATCTAC 58.479 41.667 0.00 0.00 0.00 2.59
6818 7056 5.299531 TGCATGTTCGAGCTACTTATCTACT 59.700 40.000 0.00 0.00 0.00 2.57
6819 7057 5.854338 GCATGTTCGAGCTACTTATCTACTC 59.146 44.000 0.00 0.00 0.00 2.59
6820 7058 6.375377 CATGTTCGAGCTACTTATCTACTCC 58.625 44.000 0.00 0.00 0.00 3.85
6821 7059 4.820716 TGTTCGAGCTACTTATCTACTCCC 59.179 45.833 0.00 0.00 0.00 4.30
6822 7060 4.978438 TCGAGCTACTTATCTACTCCCT 57.022 45.455 0.00 0.00 0.00 4.20
6823 7061 4.897140 TCGAGCTACTTATCTACTCCCTC 58.103 47.826 0.00 0.00 0.00 4.30
6824 7062 4.594062 TCGAGCTACTTATCTACTCCCTCT 59.406 45.833 0.00 0.00 0.00 3.69
6825 7063 4.693566 CGAGCTACTTATCTACTCCCTCTG 59.306 50.000 0.00 0.00 0.00 3.35
6826 7064 5.627135 GAGCTACTTATCTACTCCCTCTGT 58.373 45.833 0.00 0.00 0.00 3.41
6827 7065 6.020881 AGCTACTTATCTACTCCCTCTGTT 57.979 41.667 0.00 0.00 0.00 3.16
6828 7066 6.436890 AGCTACTTATCTACTCCCTCTGTTT 58.563 40.000 0.00 0.00 0.00 2.83
6829 7067 6.548251 AGCTACTTATCTACTCCCTCTGTTTC 59.452 42.308 0.00 0.00 0.00 2.78
6830 7068 6.548251 GCTACTTATCTACTCCCTCTGTTTCT 59.452 42.308 0.00 0.00 0.00 2.52
6831 7069 7.720515 GCTACTTATCTACTCCCTCTGTTTCTA 59.279 40.741 0.00 0.00 0.00 2.10
6832 7070 9.280174 CTACTTATCTACTCCCTCTGTTTCTAG 57.720 40.741 0.00 0.00 0.00 2.43
6833 7071 7.874252 ACTTATCTACTCCCTCTGTTTCTAGA 58.126 38.462 0.00 0.00 0.00 2.43
6834 7072 8.507761 ACTTATCTACTCCCTCTGTTTCTAGAT 58.492 37.037 0.00 0.00 0.00 1.98
6838 7076 9.890915 ATCTACTCCCTCTGTTTCTAGATATTT 57.109 33.333 0.00 0.00 0.00 1.40
6839 7077 9.137459 TCTACTCCCTCTGTTTCTAGATATTTG 57.863 37.037 0.00 0.00 0.00 2.32
6840 7078 7.741554 ACTCCCTCTGTTTCTAGATATTTGT 57.258 36.000 0.00 0.00 0.00 2.83
6841 7079 7.787028 ACTCCCTCTGTTTCTAGATATTTGTC 58.213 38.462 0.00 0.00 0.00 3.18
6842 7080 7.621683 ACTCCCTCTGTTTCTAGATATTTGTCT 59.378 37.037 0.00 0.00 0.00 3.41
6843 7081 8.380742 TCCCTCTGTTTCTAGATATTTGTCTT 57.619 34.615 0.00 0.00 0.00 3.01
6844 7082 8.826765 TCCCTCTGTTTCTAGATATTTGTCTTT 58.173 33.333 0.00 0.00 0.00 2.52
6845 7083 9.103861 CCCTCTGTTTCTAGATATTTGTCTTTC 57.896 37.037 0.00 0.00 0.00 2.62
6846 7084 9.883142 CCTCTGTTTCTAGATATTTGTCTTTCT 57.117 33.333 0.00 0.00 0.00 2.52
6862 7100 8.964476 TTGTCTTTCTAGAGATTTCAACAACT 57.036 30.769 0.00 0.00 0.00 3.16
6863 7101 8.370493 TGTCTTTCTAGAGATTTCAACAACTG 57.630 34.615 0.00 0.00 0.00 3.16
6864 7102 8.204160 TGTCTTTCTAGAGATTTCAACAACTGA 58.796 33.333 0.00 0.00 0.00 3.41
6865 7103 8.491950 GTCTTTCTAGAGATTTCAACAACTGAC 58.508 37.037 0.00 0.00 32.21 3.51
6866 7104 8.424918 TCTTTCTAGAGATTTCAACAACTGACT 58.575 33.333 0.00 0.00 32.21 3.41
6867 7105 7.953158 TTCTAGAGATTTCAACAACTGACTG 57.047 36.000 0.00 0.00 32.21 3.51
6868 7106 5.928839 TCTAGAGATTTCAACAACTGACTGC 59.071 40.000 0.00 0.00 32.21 4.40
6869 7107 4.454678 AGAGATTTCAACAACTGACTGCA 58.545 39.130 0.00 0.00 32.21 4.41
6870 7108 5.068636 AGAGATTTCAACAACTGACTGCAT 58.931 37.500 0.00 0.00 32.21 3.96
6871 7109 6.233434 AGAGATTTCAACAACTGACTGCATA 58.767 36.000 0.00 0.00 32.21 3.14
6872 7110 6.148480 AGAGATTTCAACAACTGACTGCATAC 59.852 38.462 0.00 0.00 32.21 2.39
6873 7111 4.466567 TTTCAACAACTGACTGCATACG 57.533 40.909 0.00 0.00 32.21 3.06
6874 7112 2.412870 TCAACAACTGACTGCATACGG 58.587 47.619 0.00 0.00 0.00 4.02
6875 7113 2.036604 TCAACAACTGACTGCATACGGA 59.963 45.455 6.18 0.00 0.00 4.69
6876 7114 2.370281 ACAACTGACTGCATACGGAG 57.630 50.000 6.18 0.00 36.48 4.63
6877 7115 1.002366 CAACTGACTGCATACGGAGC 58.998 55.000 6.18 0.00 32.91 4.70
6878 7116 0.608130 AACTGACTGCATACGGAGCA 59.392 50.000 6.18 0.00 40.19 4.26
6879 7117 0.608130 ACTGACTGCATACGGAGCAA 59.392 50.000 6.18 0.00 42.17 3.91
6880 7118 1.001974 ACTGACTGCATACGGAGCAAA 59.998 47.619 6.18 0.00 42.17 3.68
6881 7119 2.076100 CTGACTGCATACGGAGCAAAA 58.924 47.619 0.00 0.00 42.17 2.44
6882 7120 2.679837 CTGACTGCATACGGAGCAAAAT 59.320 45.455 0.00 0.00 42.17 1.82
6883 7121 2.419673 TGACTGCATACGGAGCAAAATG 59.580 45.455 0.00 0.00 42.17 2.32
6884 7122 2.677836 GACTGCATACGGAGCAAAATGA 59.322 45.455 0.00 0.00 42.17 2.57
6885 7123 2.679837 ACTGCATACGGAGCAAAATGAG 59.320 45.455 0.00 0.00 42.17 2.90
6886 7124 2.679837 CTGCATACGGAGCAAAATGAGT 59.320 45.455 0.00 0.00 42.17 3.41
6887 7125 2.419673 TGCATACGGAGCAAAATGAGTG 59.580 45.455 0.00 0.00 39.39 3.51
6888 7126 2.677836 GCATACGGAGCAAAATGAGTGA 59.322 45.455 0.00 0.00 0.00 3.41
6889 7127 3.126858 GCATACGGAGCAAAATGAGTGAA 59.873 43.478 0.00 0.00 0.00 3.18
6890 7128 4.651994 CATACGGAGCAAAATGAGTGAAC 58.348 43.478 0.00 0.00 0.00 3.18
6891 7129 1.880027 ACGGAGCAAAATGAGTGAACC 59.120 47.619 0.00 0.00 0.00 3.62
6892 7130 2.154462 CGGAGCAAAATGAGTGAACCT 58.846 47.619 0.00 0.00 0.00 3.50
6893 7131 3.244422 ACGGAGCAAAATGAGTGAACCTA 60.244 43.478 0.00 0.00 0.00 3.08
6894 7132 3.125316 CGGAGCAAAATGAGTGAACCTAC 59.875 47.826 0.00 0.00 0.00 3.18
6895 7133 4.072131 GGAGCAAAATGAGTGAACCTACA 58.928 43.478 0.00 0.00 0.00 2.74
6896 7134 4.083271 GGAGCAAAATGAGTGAACCTACAC 60.083 45.833 0.00 0.00 40.60 2.90
6910 7148 9.036980 AGTGAACCTACACTCTAAAATATGTCT 57.963 33.333 0.00 0.00 46.36 3.41
6929 7167 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
6931 7169 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
6932 7170 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
6933 7171 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
6934 7172 6.770746 ATATACATCCGTATGTGGTAGTCC 57.229 41.667 3.56 0.00 45.99 3.85
6935 7173 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
6936 7174 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
6937 7175 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
6938 7176 4.163458 ACATCCGTATGTGGTAGTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
6939 7177 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
6940 7178 3.770388 TCCGTATGTGGTAGTCCATTTGA 59.230 43.478 0.00 0.00 46.20 2.69
6941 7179 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
6942 7180 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
6943 7181 5.588648 CCGTATGTGGTAGTCCATTTGAAAT 59.411 40.000 0.00 0.00 46.20 2.17
6944 7182 6.238374 CCGTATGTGGTAGTCCATTTGAAATC 60.238 42.308 0.00 0.00 46.20 2.17
6945 7183 6.538742 CGTATGTGGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
6946 7184 7.065803 CGTATGTGGTAGTCCATTTGAAATCTT 59.934 37.037 0.00 0.00 46.20 2.40
6947 7185 7.781324 ATGTGGTAGTCCATTTGAAATCTTT 57.219 32.000 0.00 0.00 46.20 2.52
6948 7186 8.877864 ATGTGGTAGTCCATTTGAAATCTTTA 57.122 30.769 0.00 0.00 46.20 1.85
6949 7187 8.698973 TGTGGTAGTCCATTTGAAATCTTTAA 57.301 30.769 0.00 0.00 46.20 1.52
6950 7188 9.137459 TGTGGTAGTCCATTTGAAATCTTTAAA 57.863 29.630 0.00 0.00 46.20 1.52
6951 7189 9.974980 GTGGTAGTCCATTTGAAATCTTTAAAA 57.025 29.630 0.00 0.00 46.20 1.52
6974 7212 9.908152 AAAAAGACAAATATTTAGGAACGAAGG 57.092 29.630 0.00 0.00 0.00 3.46
6975 7213 7.625828 AAGACAAATATTTAGGAACGAAGGG 57.374 36.000 0.00 0.00 0.00 3.95
6976 7214 6.954232 AGACAAATATTTAGGAACGAAGGGA 58.046 36.000 0.00 0.00 0.00 4.20
6977 7215 7.048512 AGACAAATATTTAGGAACGAAGGGAG 58.951 38.462 0.00 0.00 0.00 4.30
7071 7310 6.597672 AGTGTGTTTGTTCACTCATTTCAGTA 59.402 34.615 0.00 0.00 40.28 2.74
7186 7427 1.004745 TCCCTGGCACCTCTTTGATTC 59.995 52.381 0.00 0.00 0.00 2.52
7203 7444 8.653338 TCTTTGATTCGTAGGATTCTAAAAACG 58.347 33.333 8.35 0.00 0.00 3.60
7209 7450 7.338800 TCGTAGGATTCTAAAAACGTAGGAT 57.661 36.000 0.00 0.00 0.00 3.24
7223 7464 4.843728 ACGTAGGATTGAAATGTCATGGT 58.156 39.130 0.00 0.00 32.48 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.904116 TGTGTCTTTTGTTAAGCGACAAG 58.096 39.130 0.00 0.00 40.33 3.16
114 120 4.873129 CGAGATCCACCACGCCCG 62.873 72.222 0.00 0.00 0.00 6.13
362 397 9.250624 GAGTAGCATAGATTGAAAAGATAACGT 57.749 33.333 0.00 0.00 0.00 3.99
363 398 9.469807 AGAGTAGCATAGATTGAAAAGATAACG 57.530 33.333 0.00 0.00 0.00 3.18
381 428 1.536072 CGCCGCTAATGAAGAGTAGCA 60.536 52.381 0.00 0.00 44.40 3.49
432 482 0.109226 GGAAGTCGTCGTGCTAAGCT 60.109 55.000 0.00 0.00 0.00 3.74
470 520 0.318107 CACTGAAGCCAGCCAAAACG 60.318 55.000 0.00 0.00 44.16 3.60
477 528 1.078567 CTCCCTCACTGAAGCCAGC 60.079 63.158 0.00 0.00 44.16 4.85
479 530 1.920325 CCCTCCCTCACTGAAGCCA 60.920 63.158 0.00 0.00 0.00 4.75
484 535 0.684479 CATCGTCCCTCCCTCACTGA 60.684 60.000 0.00 0.00 0.00 3.41
603 654 8.407457 TCATATGATGTAAGACGTTTTCTGAC 57.593 34.615 0.00 0.00 36.30 3.51
621 672 7.293299 AGAAATAACACTCCCTCCATCATATGA 59.707 37.037 8.10 8.10 0.00 2.15
622 673 7.456725 AGAAATAACACTCCCTCCATCATATG 58.543 38.462 0.00 0.00 0.00 1.78
629 739 4.104102 ACACAAGAAATAACACTCCCTCCA 59.896 41.667 0.00 0.00 0.00 3.86
630 740 4.652822 ACACAAGAAATAACACTCCCTCC 58.347 43.478 0.00 0.00 0.00 4.30
639 749 8.403236 ACAAGTACAAGGAACACAAGAAATAAC 58.597 33.333 0.00 0.00 0.00 1.89
642 752 6.377146 ACACAAGTACAAGGAACACAAGAAAT 59.623 34.615 0.00 0.00 0.00 2.17
655 765 5.277345 GCACTACAAGGAACACAAGTACAAG 60.277 44.000 0.00 0.00 0.00 3.16
660 770 2.092646 TGGCACTACAAGGAACACAAGT 60.093 45.455 0.00 0.00 0.00 3.16
661 771 2.571212 TGGCACTACAAGGAACACAAG 58.429 47.619 0.00 0.00 0.00 3.16
662 772 2.719531 TGGCACTACAAGGAACACAA 57.280 45.000 0.00 0.00 0.00 3.33
663 773 2.105649 TCATGGCACTACAAGGAACACA 59.894 45.455 0.00 0.00 0.00 3.72
664 774 2.778299 TCATGGCACTACAAGGAACAC 58.222 47.619 0.00 0.00 0.00 3.32
665 775 3.346315 CATCATGGCACTACAAGGAACA 58.654 45.455 0.00 0.00 0.00 3.18
666 776 2.684881 CCATCATGGCACTACAAGGAAC 59.315 50.000 0.00 0.00 0.00 3.62
667 777 2.575735 TCCATCATGGCACTACAAGGAA 59.424 45.455 0.00 0.00 37.47 3.36
668 778 2.195727 TCCATCATGGCACTACAAGGA 58.804 47.619 0.00 0.00 37.47 3.36
669 779 2.715749 TCCATCATGGCACTACAAGG 57.284 50.000 0.00 0.00 37.47 3.61
670 780 3.877559 TCTTCCATCATGGCACTACAAG 58.122 45.455 0.00 0.00 37.47 3.16
671 781 3.998913 TCTTCCATCATGGCACTACAA 57.001 42.857 0.00 0.00 37.47 2.41
672 782 4.508551 AATCTTCCATCATGGCACTACA 57.491 40.909 0.00 0.00 37.47 2.74
673 783 6.942532 TTTAATCTTCCATCATGGCACTAC 57.057 37.500 0.00 0.00 37.47 2.73
674 784 7.953005 TTTTTAATCTTCCATCATGGCACTA 57.047 32.000 0.00 0.00 37.47 2.74
675 785 6.855763 TTTTTAATCTTCCATCATGGCACT 57.144 33.333 0.00 0.00 37.47 4.40
701 811 9.667107 GTCGATCAGGGAATTGGATTATTATTA 57.333 33.333 0.00 0.00 0.00 0.98
719 833 0.803768 CTGTTGCCCTCGTCGATCAG 60.804 60.000 0.00 0.00 0.00 2.90
723 837 1.750341 TTTCCTGTTGCCCTCGTCGA 61.750 55.000 0.00 0.00 0.00 4.20
784 899 3.615509 GATGGACGGCCCGTGGAAA 62.616 63.158 16.53 0.00 41.37 3.13
919 1034 0.634465 GGGAGAGAGAGAGGAAGGGT 59.366 60.000 0.00 0.00 0.00 4.34
920 1035 0.105709 GGGGAGAGAGAGAGGAAGGG 60.106 65.000 0.00 0.00 0.00 3.95
923 1038 1.615814 CGGGGGAGAGAGAGAGGAA 59.384 63.158 0.00 0.00 0.00 3.36
925 1040 2.520741 GCGGGGGAGAGAGAGAGG 60.521 72.222 0.00 0.00 0.00 3.69
927 1042 4.144727 GGGCGGGGGAGAGAGAGA 62.145 72.222 0.00 0.00 0.00 3.10
1276 1403 8.989980 CCTATTCGTTCTATGAAAGAAATACCC 58.010 37.037 11.30 0.00 45.78 3.69
1641 1776 1.271840 ACCTAAGGATGCAAGCGGGA 61.272 55.000 0.00 0.00 0.00 5.14
1723 1867 3.629398 CCAGCAACTCCATTCATAACTCC 59.371 47.826 0.00 0.00 0.00 3.85
1814 1958 3.422862 CGTGCAAACAAATTTAATGGGCG 60.423 43.478 0.00 0.00 0.00 6.13
1816 1960 4.143137 GCTCGTGCAAACAAATTTAATGGG 60.143 41.667 4.26 0.00 39.41 4.00
1882 2027 8.071177 ACTACAATACTAATACCGGACAAACT 57.929 34.615 9.46 0.00 0.00 2.66
1888 2033 8.963725 CATATGGACTACAATACTAATACCGGA 58.036 37.037 9.46 0.00 0.00 5.14
2480 2667 1.265365 GAAAGTGAGCAGTTGCCAGTC 59.735 52.381 0.00 0.00 43.38 3.51
2539 2726 5.145564 AGGATGTTATTAGCTCGGGACTAA 58.854 41.667 0.00 0.00 34.29 2.24
2564 2751 4.667519 ATACGTTGGAGGAGGTGTAATC 57.332 45.455 0.00 0.00 0.00 1.75
2584 2771 8.691797 GTTAACATGTGGAATGGTTTGGTATAT 58.308 33.333 0.00 0.00 0.00 0.86
2589 2776 4.283212 AGGTTAACATGTGGAATGGTTTGG 59.717 41.667 8.10 0.00 0.00 3.28
2621 2808 7.714377 GTGAATCAAAGATGTCAGGAGATGTAT 59.286 37.037 0.00 0.00 0.00 2.29
2655 2842 4.458989 TGTTGATTGTTGCTAGGATGGAAC 59.541 41.667 0.00 0.00 38.49 3.62
2678 2865 2.418368 TGCTCAAATCTATGCCGGTT 57.582 45.000 1.90 0.00 0.00 4.44
3543 3730 8.462143 TTGTAAGTAAAGCTCGAGAATAACAG 57.538 34.615 18.75 0.00 0.00 3.16
3822 4009 6.531948 CAGGTTCAACTTCTAGTGCATAGTAC 59.468 42.308 0.00 0.00 32.85 2.73
3830 4017 4.039245 TCTCCACAGGTTCAACTTCTAGTG 59.961 45.833 0.00 0.00 0.00 2.74
3999 4186 8.970691 ATCATCGAATTTTCTTTCGTTTCATT 57.029 26.923 6.50 0.00 46.50 2.57
4268 4455 5.456921 AGCCCCTTCTTGATCAAAGATTA 57.543 39.130 9.88 0.00 44.46 1.75
4314 4501 4.337274 ACGGCTAAAATGTAATAGTTGGCC 59.663 41.667 0.00 0.00 41.64 5.36
4335 4529 1.908066 GCGTTGGAGTTGGCCTAACG 61.908 60.000 3.32 12.10 44.15 3.18
4394 4598 1.213430 TCCGTTTTCCTGACCCAAACT 59.787 47.619 0.00 0.00 0.00 2.66
4424 4628 3.733960 TGTCCGTCTGTCCGCTCG 61.734 66.667 0.00 0.00 0.00 5.03
4425 4629 2.126424 GTGTCCGTCTGTCCGCTC 60.126 66.667 0.00 0.00 0.00 5.03
4426 4630 4.039357 CGTGTCCGTCTGTCCGCT 62.039 66.667 0.00 0.00 0.00 5.52
4427 4631 4.034258 TCGTGTCCGTCTGTCCGC 62.034 66.667 0.00 0.00 35.01 5.54
4428 4632 2.126965 GTCGTGTCCGTCTGTCCG 60.127 66.667 0.00 0.00 35.01 4.79
4429 4633 2.197643 GAGGTCGTGTCCGTCTGTCC 62.198 65.000 0.00 0.00 35.01 4.02
4430 4634 1.209640 GAGGTCGTGTCCGTCTGTC 59.790 63.158 0.00 0.00 35.01 3.51
4431 4635 1.228184 AGAGGTCGTGTCCGTCTGT 60.228 57.895 0.00 0.00 35.01 3.41
4432 4636 1.210413 CAGAGGTCGTGTCCGTCTG 59.790 63.158 0.00 0.00 35.01 3.51
4433 4637 2.627737 GCAGAGGTCGTGTCCGTCT 61.628 63.158 0.00 0.00 35.01 4.18
4434 4638 2.126424 GCAGAGGTCGTGTCCGTC 60.126 66.667 0.00 0.00 35.01 4.79
4435 4639 4.039357 CGCAGAGGTCGTGTCCGT 62.039 66.667 0.00 0.00 35.01 4.69
4440 4644 4.680237 TTGGGCGCAGAGGTCGTG 62.680 66.667 10.83 0.00 0.00 4.35
4441 4645 4.681978 GTTGGGCGCAGAGGTCGT 62.682 66.667 10.83 0.00 0.00 4.34
4527 4731 3.712881 GTCGTTGACACTGGCGGC 61.713 66.667 0.00 0.00 32.09 6.53
4694 4898 3.052082 CAACCACGGCAGCAGAGG 61.052 66.667 7.46 7.46 0.00 3.69
4695 4899 2.031012 TCAACCACGGCAGCAGAG 59.969 61.111 0.00 0.00 0.00 3.35
4696 4900 2.031012 CTCAACCACGGCAGCAGA 59.969 61.111 0.00 0.00 0.00 4.26
4697 4901 3.052082 CCTCAACCACGGCAGCAG 61.052 66.667 0.00 0.00 0.00 4.24
4698 4902 3.872603 ACCTCAACCACGGCAGCA 61.873 61.111 0.00 0.00 0.00 4.41
4699 4903 3.357079 CACCTCAACCACGGCAGC 61.357 66.667 0.00 0.00 0.00 5.25
4700 4904 3.357079 GCACCTCAACCACGGCAG 61.357 66.667 0.00 0.00 0.00 4.85
4701 4905 3.705934 TTGCACCTCAACCACGGCA 62.706 57.895 0.00 0.00 0.00 5.69
4702 4906 2.904866 TTGCACCTCAACCACGGC 60.905 61.111 0.00 0.00 0.00 5.68
4709 4913 2.712539 CGCGTTGTTGCACCTCAA 59.287 55.556 0.00 0.00 34.15 3.02
4710 4914 3.947841 GCGCGTTGTTGCACCTCA 61.948 61.111 8.43 0.00 34.15 3.86
4711 4915 4.683334 GGCGCGTTGTTGCACCTC 62.683 66.667 8.43 0.00 34.22 3.85
4729 4933 3.998672 TCGACCTCAACCACGGCC 61.999 66.667 0.00 0.00 0.00 6.13
4730 4934 2.737376 GTCGACCTCAACCACGGC 60.737 66.667 3.51 0.00 0.00 5.68
4731 4935 1.663702 GTGTCGACCTCAACCACGG 60.664 63.158 14.12 0.00 0.00 4.94
4732 4936 1.663702 GGTGTCGACCTCAACCACG 60.664 63.158 14.12 0.00 39.47 4.94
4733 4937 1.301479 GGGTGTCGACCTCAACCAC 60.301 63.158 20.62 8.07 41.80 4.16
4734 4938 2.863346 CGGGTGTCGACCTCAACCA 61.863 63.158 20.62 0.00 42.25 3.67
4735 4939 2.048503 CGGGTGTCGACCTCAACC 60.049 66.667 14.12 13.51 42.66 3.77
4736 4940 2.737376 GCGGGTGTCGACCTCAAC 60.737 66.667 14.12 3.98 42.66 3.18
4737 4941 3.998672 GGCGGGTGTCGACCTCAA 61.999 66.667 14.12 0.00 42.09 3.02
4788 4992 4.181010 CTCCTCCCGTGCCATGGG 62.181 72.222 16.45 16.45 46.17 4.00
4789 4993 4.864334 GCTCCTCCCGTGCCATGG 62.864 72.222 7.63 7.63 0.00 3.66
4843 5047 4.335647 AGCGGTGGACTTGGCAGG 62.336 66.667 0.00 0.00 0.00 4.85
4844 5048 3.052082 CAGCGGTGGACTTGGCAG 61.052 66.667 6.74 0.00 0.00 4.85
4909 5113 2.183811 CAGAGACCAGAGCTGCCG 59.816 66.667 0.00 0.00 0.00 5.69
5249 5453 0.899019 ACCCCGCTTTTCTCTCTCTC 59.101 55.000 0.00 0.00 0.00 3.20
5286 5490 0.468029 CAGGGCCCATATGTCAACCC 60.468 60.000 27.56 10.22 37.63 4.11
5332 5536 3.243636 GGACACAAAACGGACAGAGTCTA 60.244 47.826 0.00 0.00 32.47 2.59
5334 5538 1.865340 GGACACAAAACGGACAGAGTC 59.135 52.381 0.00 0.00 0.00 3.36
5415 5619 2.745821 GACCCGTCCTATTGTTTTGTCC 59.254 50.000 0.00 0.00 0.00 4.02
5465 5669 2.109387 CGTGTCCGTTTGGGTCCA 59.891 61.111 0.00 0.00 37.00 4.02
5718 5941 7.467811 GCATGTTGGAAGGATTAATGTAGTCTG 60.468 40.741 0.00 0.00 0.00 3.51
5731 5954 7.289310 TGATTAAGATATGCATGTTGGAAGGA 58.711 34.615 10.16 0.00 0.00 3.36
5785 6008 2.083167 TTGGTAGGCTAAAACGGACG 57.917 50.000 0.00 0.00 0.00 4.79
6087 6322 9.429359 TCCGTACCAAAATATAAGACGTTTTTA 57.571 29.630 0.00 0.00 0.00 1.52
6284 6521 2.066999 AGATCACCCCCTTCGAGCC 61.067 63.158 0.00 0.00 0.00 4.70
6623 6860 2.991190 TCTGCGACAAGTAATTCGGAAC 59.009 45.455 0.00 0.00 35.02 3.62
6625 6862 3.306917 TTCTGCGACAAGTAATTCGGA 57.693 42.857 0.00 0.00 35.73 4.55
6627 6864 4.092821 TCCATTTCTGCGACAAGTAATTCG 59.907 41.667 0.00 0.00 38.31 3.34
6628 6865 5.545658 TCCATTTCTGCGACAAGTAATTC 57.454 39.130 0.00 0.00 0.00 2.17
6629 6866 5.415701 ACATCCATTTCTGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
6631 6868 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
6633 6870 2.783135 ACATCCATTTCTGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
6634 6871 4.813161 AGATACATCCATTTCTGCGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
6636 6873 4.406648 AGATACATCCATTTCTGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
6637 6874 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
6638 6875 6.040955 AGTTCTAGATACATCCATTTCTGCGA 59.959 38.462 0.00 0.00 0.00 5.10
6639 6876 6.219473 AGTTCTAGATACATCCATTTCTGCG 58.781 40.000 0.00 0.00 0.00 5.18
6640 6877 9.547753 TTTAGTTCTAGATACATCCATTTCTGC 57.452 33.333 0.00 0.00 0.00 4.26
6669 6906 7.272244 TCGTGGAAATGAATGTATGTAGACAT 58.728 34.615 0.08 0.08 41.92 3.06
6670 6907 6.635755 TCGTGGAAATGAATGTATGTAGACA 58.364 36.000 0.00 0.00 0.00 3.41
6671 6908 7.715265 ATCGTGGAAATGAATGTATGTAGAC 57.285 36.000 0.00 0.00 0.00 2.59
6672 6909 9.476202 CTTATCGTGGAAATGAATGTATGTAGA 57.524 33.333 0.00 0.00 0.00 2.59
6673 6910 9.261180 ACTTATCGTGGAAATGAATGTATGTAG 57.739 33.333 0.00 0.00 0.00 2.74
6675 6912 9.607988 TTACTTATCGTGGAAATGAATGTATGT 57.392 29.630 0.00 0.00 0.00 2.29
6679 6916 8.621286 GGAATTACTTATCGTGGAAATGAATGT 58.379 33.333 0.00 0.00 0.00 2.71
6680 6917 7.798516 CGGAATTACTTATCGTGGAAATGAATG 59.201 37.037 0.00 0.00 0.00 2.67
6681 6918 7.713507 TCGGAATTACTTATCGTGGAAATGAAT 59.286 33.333 0.00 0.00 0.00 2.57
6682 6919 7.042950 TCGGAATTACTTATCGTGGAAATGAA 58.957 34.615 0.00 0.00 0.00 2.57
6683 6920 6.575267 TCGGAATTACTTATCGTGGAAATGA 58.425 36.000 0.00 0.00 0.00 2.57
6684 6921 6.838198 TCGGAATTACTTATCGTGGAAATG 57.162 37.500 0.00 0.00 0.00 2.32
6685 6922 6.019318 CGTTCGGAATTACTTATCGTGGAAAT 60.019 38.462 0.00 0.00 0.00 2.17
6686 6923 5.289193 CGTTCGGAATTACTTATCGTGGAAA 59.711 40.000 0.00 0.00 0.00 3.13
6687 6924 4.799949 CGTTCGGAATTACTTATCGTGGAA 59.200 41.667 0.00 0.00 0.00 3.53
6688 6925 4.353737 CGTTCGGAATTACTTATCGTGGA 58.646 43.478 0.00 0.00 0.00 4.02
6689 6926 3.488310 CCGTTCGGAATTACTTATCGTGG 59.512 47.826 5.19 0.00 0.00 4.94
6690 6927 4.353737 TCCGTTCGGAATTACTTATCGTG 58.646 43.478 11.66 0.00 0.00 4.35
6691 6928 4.498682 CCTCCGTTCGGAATTACTTATCGT 60.499 45.833 14.79 0.00 33.41 3.73
6692 6929 3.979495 CCTCCGTTCGGAATTACTTATCG 59.021 47.826 14.79 0.00 33.41 2.92
6693 6930 4.038402 TCCCTCCGTTCGGAATTACTTATC 59.962 45.833 14.79 0.00 33.41 1.75
6694 6931 3.962718 TCCCTCCGTTCGGAATTACTTAT 59.037 43.478 14.79 0.00 33.41 1.73
6695 6932 3.364549 TCCCTCCGTTCGGAATTACTTA 58.635 45.455 14.79 0.00 33.41 2.24
6696 6933 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
6697 6934 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
6698 6935 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
6699 6936 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
6700 6937 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
6701 6938 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
6702 6939 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
6703 6940 0.038744 AAGTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
6704 6941 1.755179 TAAGTACTCCCTCCGTTCGG 58.245 55.000 4.74 4.74 0.00 4.30
6705 6942 3.212685 AGATAAGTACTCCCTCCGTTCG 58.787 50.000 0.00 0.00 0.00 3.95
6706 6943 5.128919 TGTAGATAAGTACTCCCTCCGTTC 58.871 45.833 0.00 0.00 0.00 3.95
6707 6944 5.121380 TGTAGATAAGTACTCCCTCCGTT 57.879 43.478 0.00 0.00 0.00 4.44
6708 6945 4.785346 TGTAGATAAGTACTCCCTCCGT 57.215 45.455 0.00 0.00 0.00 4.69
6709 6946 5.768662 TGATTGTAGATAAGTACTCCCTCCG 59.231 44.000 0.00 0.00 0.00 4.63
6710 6947 7.256012 CCTTGATTGTAGATAAGTACTCCCTCC 60.256 44.444 0.00 0.00 0.00 4.30
6711 6948 7.288158 ACCTTGATTGTAGATAAGTACTCCCTC 59.712 40.741 0.00 0.00 0.00 4.30
6712 6949 7.133483 ACCTTGATTGTAGATAAGTACTCCCT 58.867 38.462 0.00 0.00 0.00 4.20
6713 6950 7.288158 AGACCTTGATTGTAGATAAGTACTCCC 59.712 40.741 0.00 0.00 0.00 4.30
6714 6951 8.138712 CAGACCTTGATTGTAGATAAGTACTCC 58.861 40.741 0.00 0.00 0.00 3.85
6715 6952 8.688151 ACAGACCTTGATTGTAGATAAGTACTC 58.312 37.037 0.00 0.00 0.00 2.59
6716 6953 8.470805 CACAGACCTTGATTGTAGATAAGTACT 58.529 37.037 0.00 0.00 0.00 2.73
6717 6954 8.467598 TCACAGACCTTGATTGTAGATAAGTAC 58.532 37.037 0.00 0.00 0.00 2.73
6718 6955 8.589701 TCACAGACCTTGATTGTAGATAAGTA 57.410 34.615 0.00 0.00 0.00 2.24
6719 6956 7.364232 CCTCACAGACCTTGATTGTAGATAAGT 60.364 40.741 0.00 0.00 0.00 2.24
6720 6957 6.983307 CCTCACAGACCTTGATTGTAGATAAG 59.017 42.308 0.00 0.00 0.00 1.73
6721 6958 6.127054 CCCTCACAGACCTTGATTGTAGATAA 60.127 42.308 0.00 0.00 0.00 1.75
6722 6959 5.363868 CCCTCACAGACCTTGATTGTAGATA 59.636 44.000 0.00 0.00 0.00 1.98
6723 6960 4.163078 CCCTCACAGACCTTGATTGTAGAT 59.837 45.833 0.00 0.00 0.00 1.98
6724 6961 3.515502 CCCTCACAGACCTTGATTGTAGA 59.484 47.826 0.00 0.00 0.00 2.59
6725 6962 3.515502 TCCCTCACAGACCTTGATTGTAG 59.484 47.826 0.00 0.00 0.00 2.74
6726 6963 3.516586 TCCCTCACAGACCTTGATTGTA 58.483 45.455 0.00 0.00 0.00 2.41
6727 6964 2.338809 TCCCTCACAGACCTTGATTGT 58.661 47.619 0.00 0.00 0.00 2.71
6728 6965 3.341823 CTTCCCTCACAGACCTTGATTG 58.658 50.000 0.00 0.00 0.00 2.67
6729 6966 2.307098 CCTTCCCTCACAGACCTTGATT 59.693 50.000 0.00 0.00 0.00 2.57
6730 6967 1.912043 CCTTCCCTCACAGACCTTGAT 59.088 52.381 0.00 0.00 0.00 2.57
6731 6968 1.352083 CCTTCCCTCACAGACCTTGA 58.648 55.000 0.00 0.00 0.00 3.02
6732 6969 1.002544 GACCTTCCCTCACAGACCTTG 59.997 57.143 0.00 0.00 0.00 3.61
6733 6970 1.132689 AGACCTTCCCTCACAGACCTT 60.133 52.381 0.00 0.00 0.00 3.50
6734 6971 0.489567 AGACCTTCCCTCACAGACCT 59.510 55.000 0.00 0.00 0.00 3.85
6815 7053 8.840200 ACAAATATCTAGAAACAGAGGGAGTA 57.160 34.615 0.00 0.00 0.00 2.59
6816 7054 7.621683 AGACAAATATCTAGAAACAGAGGGAGT 59.378 37.037 0.00 0.00 0.00 3.85
6817 7055 8.017418 AGACAAATATCTAGAAACAGAGGGAG 57.983 38.462 0.00 0.00 0.00 4.30
6818 7056 7.979786 AGACAAATATCTAGAAACAGAGGGA 57.020 36.000 0.00 0.00 0.00 4.20
6819 7057 9.103861 GAAAGACAAATATCTAGAAACAGAGGG 57.896 37.037 0.00 0.00 0.00 4.30
6820 7058 9.883142 AGAAAGACAAATATCTAGAAACAGAGG 57.117 33.333 0.00 0.00 0.00 3.69
6836 7074 9.396022 AGTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
6837 7075 8.830580 CAGTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
6838 7076 8.204160 TCAGTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 31.34 3.41
6839 7077 8.491950 GTCAGTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 37.61 3.01
6840 7078 8.424918 AGTCAGTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 37.61 2.52
6841 7079 8.494347 CAGTCAGTTGTTGAAATCTCTAGAAAG 58.506 37.037 0.00 0.00 37.61 2.62
6842 7080 7.041780 GCAGTCAGTTGTTGAAATCTCTAGAAA 60.042 37.037 0.00 0.00 37.61 2.52
6843 7081 6.425114 GCAGTCAGTTGTTGAAATCTCTAGAA 59.575 38.462 0.00 0.00 37.61 2.10
6844 7082 5.928839 GCAGTCAGTTGTTGAAATCTCTAGA 59.071 40.000 0.00 0.00 37.61 2.43
6845 7083 5.698089 TGCAGTCAGTTGTTGAAATCTCTAG 59.302 40.000 0.00 0.00 37.61 2.43
6846 7084 5.610398 TGCAGTCAGTTGTTGAAATCTCTA 58.390 37.500 0.00 0.00 37.61 2.43
6847 7085 4.454678 TGCAGTCAGTTGTTGAAATCTCT 58.545 39.130 0.00 0.00 37.61 3.10
6848 7086 4.818534 TGCAGTCAGTTGTTGAAATCTC 57.181 40.909 0.00 0.00 37.61 2.75
6849 7087 5.106948 CGTATGCAGTCAGTTGTTGAAATCT 60.107 40.000 0.00 0.00 37.61 2.40
6850 7088 5.082059 CGTATGCAGTCAGTTGTTGAAATC 58.918 41.667 0.00 0.00 37.61 2.17
6851 7089 4.083324 CCGTATGCAGTCAGTTGTTGAAAT 60.083 41.667 0.00 0.00 37.61 2.17
6852 7090 3.249799 CCGTATGCAGTCAGTTGTTGAAA 59.750 43.478 0.00 0.00 37.61 2.69
6853 7091 2.805671 CCGTATGCAGTCAGTTGTTGAA 59.194 45.455 0.00 0.00 37.61 2.69
6854 7092 2.036604 TCCGTATGCAGTCAGTTGTTGA 59.963 45.455 0.00 0.00 0.00 3.18
6855 7093 2.412870 TCCGTATGCAGTCAGTTGTTG 58.587 47.619 0.00 0.00 0.00 3.33
6856 7094 2.688507 CTCCGTATGCAGTCAGTTGTT 58.311 47.619 0.00 0.00 0.00 2.83
6857 7095 1.673033 GCTCCGTATGCAGTCAGTTGT 60.673 52.381 0.00 0.00 0.00 3.32
6858 7096 1.002366 GCTCCGTATGCAGTCAGTTG 58.998 55.000 0.00 0.00 0.00 3.16
6859 7097 0.608130 TGCTCCGTATGCAGTCAGTT 59.392 50.000 0.00 0.00 35.31 3.16
6860 7098 0.608130 TTGCTCCGTATGCAGTCAGT 59.392 50.000 0.00 0.00 41.71 3.41
6861 7099 1.725641 TTTGCTCCGTATGCAGTCAG 58.274 50.000 0.00 0.00 41.71 3.51
6862 7100 2.177394 TTTTGCTCCGTATGCAGTCA 57.823 45.000 0.00 0.00 41.71 3.41
6863 7101 2.677836 TCATTTTGCTCCGTATGCAGTC 59.322 45.455 0.00 0.00 41.71 3.51
6864 7102 2.679837 CTCATTTTGCTCCGTATGCAGT 59.320 45.455 0.00 0.00 41.71 4.40
6865 7103 2.679837 ACTCATTTTGCTCCGTATGCAG 59.320 45.455 0.00 0.00 41.71 4.41
6866 7104 2.419673 CACTCATTTTGCTCCGTATGCA 59.580 45.455 0.00 0.00 38.80 3.96
6867 7105 2.677836 TCACTCATTTTGCTCCGTATGC 59.322 45.455 0.00 0.00 0.00 3.14
6868 7106 4.437390 GGTTCACTCATTTTGCTCCGTATG 60.437 45.833 0.00 0.00 0.00 2.39
6869 7107 3.689649 GGTTCACTCATTTTGCTCCGTAT 59.310 43.478 0.00 0.00 0.00 3.06
6870 7108 3.071479 GGTTCACTCATTTTGCTCCGTA 58.929 45.455 0.00 0.00 0.00 4.02
6871 7109 1.880027 GGTTCACTCATTTTGCTCCGT 59.120 47.619 0.00 0.00 0.00 4.69
6872 7110 2.154462 AGGTTCACTCATTTTGCTCCG 58.846 47.619 0.00 0.00 0.00 4.63
6873 7111 4.072131 TGTAGGTTCACTCATTTTGCTCC 58.928 43.478 0.00 0.00 0.00 4.70
6874 7112 4.757149 AGTGTAGGTTCACTCATTTTGCTC 59.243 41.667 0.00 0.00 44.07 4.26
6875 7113 4.718961 AGTGTAGGTTCACTCATTTTGCT 58.281 39.130 0.00 0.00 44.07 3.91
6903 7141 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
6905 7143 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
6906 7144 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
6907 7145 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
6908 7146 7.772292 GGACTACCACATACGGATGTATATAGA 59.228 40.741 22.62 5.04 44.82 1.98
6909 7147 7.555195 TGGACTACCACATACGGATGTATATAG 59.445 40.741 14.23 16.35 44.82 1.31
6910 7148 7.404481 TGGACTACCACATACGGATGTATATA 58.596 38.462 14.23 5.36 44.82 0.86
6911 7149 6.250711 TGGACTACCACATACGGATGTATAT 58.749 40.000 14.23 4.37 44.82 0.86
6912 7150 5.633117 TGGACTACCACATACGGATGTATA 58.367 41.667 14.23 8.27 44.82 1.47
6913 7151 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
6914 7152 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
6948 7186 9.908152 CCTTCGTTCCTAAATATTTGTCTTTTT 57.092 29.630 11.05 0.00 0.00 1.94
6949 7187 8.520351 CCCTTCGTTCCTAAATATTTGTCTTTT 58.480 33.333 11.05 0.00 0.00 2.27
6950 7188 7.886446 TCCCTTCGTTCCTAAATATTTGTCTTT 59.114 33.333 11.05 0.00 0.00 2.52
6951 7189 7.399634 TCCCTTCGTTCCTAAATATTTGTCTT 58.600 34.615 11.05 0.00 0.00 3.01
6952 7190 6.954232 TCCCTTCGTTCCTAAATATTTGTCT 58.046 36.000 11.05 0.00 0.00 3.41
6953 7191 6.822170 ACTCCCTTCGTTCCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
6954 7192 6.718294 ACTCCCTTCGTTCCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
6955 7193 7.985752 AGTACTCCCTTCGTTCCTAAATATTTG 59.014 37.037 11.05 1.40 0.00 2.32
6956 7194 8.087303 AGTACTCCCTTCGTTCCTAAATATTT 57.913 34.615 5.89 5.89 0.00 1.40
6957 7195 7.343833 TGAGTACTCCCTTCGTTCCTAAATATT 59.656 37.037 20.11 0.00 0.00 1.28
6958 7196 6.837568 TGAGTACTCCCTTCGTTCCTAAATAT 59.162 38.462 20.11 0.00 0.00 1.28
6959 7197 6.189859 TGAGTACTCCCTTCGTTCCTAAATA 58.810 40.000 20.11 0.00 0.00 1.40
6960 7198 5.021458 TGAGTACTCCCTTCGTTCCTAAAT 58.979 41.667 20.11 0.00 0.00 1.40
6961 7199 4.410099 TGAGTACTCCCTTCGTTCCTAAA 58.590 43.478 20.11 0.00 0.00 1.85
6962 7200 4.038271 TGAGTACTCCCTTCGTTCCTAA 57.962 45.455 20.11 0.00 0.00 2.69
6963 7201 3.726557 TGAGTACTCCCTTCGTTCCTA 57.273 47.619 20.11 0.00 0.00 2.94
6964 7202 2.599408 TGAGTACTCCCTTCGTTCCT 57.401 50.000 20.11 0.00 0.00 3.36
6965 7203 3.430513 GGAATGAGTACTCCCTTCGTTCC 60.431 52.174 20.11 16.58 44.92 3.62
6966 7204 3.194968 TGGAATGAGTACTCCCTTCGTTC 59.805 47.826 20.11 11.94 36.56 3.95
6967 7205 3.170717 TGGAATGAGTACTCCCTTCGTT 58.829 45.455 20.11 3.39 0.00 3.85
6968 7206 2.816411 TGGAATGAGTACTCCCTTCGT 58.184 47.619 20.11 0.00 0.00 3.85
6969 7207 4.141937 TGAATGGAATGAGTACTCCCTTCG 60.142 45.833 20.11 0.00 38.50 3.79
6970 7208 5.104735 AGTGAATGGAATGAGTACTCCCTTC 60.105 44.000 20.11 19.83 37.06 3.46
6971 7209 4.785376 AGTGAATGGAATGAGTACTCCCTT 59.215 41.667 20.11 13.18 0.00 3.95
6972 7210 4.366267 AGTGAATGGAATGAGTACTCCCT 58.634 43.478 20.11 6.97 0.00 4.20
6973 7211 4.762289 AGTGAATGGAATGAGTACTCCC 57.238 45.455 20.11 14.13 0.00 4.30
7148 7389 5.132816 CCAGGGAAAAACCATCTACTATCCT 59.867 44.000 0.00 0.00 41.20 3.24
7159 7400 0.469144 GAGGTGCCAGGGAAAAACCA 60.469 55.000 0.00 0.00 41.20 3.67
7165 7406 1.075601 ATCAAAGAGGTGCCAGGGAA 58.924 50.000 0.00 0.00 0.00 3.97
7186 7427 7.703621 TCAATCCTACGTTTTTAGAATCCTACG 59.296 37.037 0.00 0.00 0.00 3.51
7203 7444 5.440610 AGGACCATGACATTTCAATCCTAC 58.559 41.667 9.73 0.00 39.33 3.18
7209 7450 4.706476 GGATTGAGGACCATGACATTTCAA 59.294 41.667 0.00 0.00 34.61 2.69
7217 7458 3.994317 TCTGTAGGATTGAGGACCATGA 58.006 45.455 0.00 0.00 0.00 3.07
7223 7464 4.540099 ACCCAAATTCTGTAGGATTGAGGA 59.460 41.667 7.94 0.00 0.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.