Multiple sequence alignment - TraesCS1D01G100700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G100700 chr1D 100.000 3773 0 0 1 3773 88222779 88226551 0.000000e+00 6968.0
1 TraesCS1D01G100700 chr1D 87.692 65 8 0 2851 2915 223387468 223387532 4.040000e-10 76.8
2 TraesCS1D01G100700 chr1A 91.240 2637 159 25 733 3314 84727706 84730325 0.000000e+00 3524.0
3 TraesCS1D01G100700 chr1A 94.872 351 16 2 3 352 84724741 84725090 7.130000e-152 547.0
4 TraesCS1D01G100700 chr1A 90.186 377 27 3 3333 3708 84793259 84793626 2.040000e-132 483.0
5 TraesCS1D01G100700 chr1A 92.188 320 24 1 400 719 84725677 84725995 5.750000e-123 451.0
6 TraesCS1D01G100700 chr1A 89.231 65 7 0 2851 2915 290344829 290344893 8.690000e-12 82.4
7 TraesCS1D01G100700 chr1B 91.914 2189 107 21 822 2957 142107428 142109599 0.000000e+00 2998.0
8 TraesCS1D01G100700 chr1B 92.471 425 29 3 297 719 142106657 142107080 4.170000e-169 604.0
9 TraesCS1D01G100700 chr1B 91.284 436 28 6 3318 3753 142131000 142131425 1.510000e-163 586.0
10 TraesCS1D01G100700 chr1B 94.152 171 8 1 3 173 142106486 142106654 3.740000e-65 259.0
11 TraesCS1D01G100700 chr1B 89.691 97 7 1 733 829 142107204 142107297 1.840000e-23 121.0
12 TraesCS1D01G100700 chr4D 84.932 438 46 6 3318 3754 464794661 464795079 3.480000e-115 425.0
13 TraesCS1D01G100700 chr4D 84.049 163 21 4 2851 3010 325068052 325067892 6.530000e-33 152.0
14 TraesCS1D01G100700 chr2B 77.119 354 70 9 1157 1506 28331834 28332180 1.070000e-45 195.0
15 TraesCS1D01G100700 chr2B 77.054 353 69 11 1159 1506 28349408 28349753 3.850000e-45 193.0
16 TraesCS1D01G100700 chr2B 92.308 65 5 0 2851 2915 33911207 33911143 4.010000e-15 93.5
17 TraesCS1D01G100700 chr2D 75.921 353 76 7 1157 1506 16232748 16233094 5.010000e-39 172.0
18 TraesCS1D01G100700 chr2D 90.769 65 6 0 2851 2915 20665801 20665737 1.870000e-13 87.9
19 TraesCS1D01G100700 chr2A 77.483 302 59 7 1157 1455 18006723 18007018 5.010000e-39 172.0
20 TraesCS1D01G100700 chr2A 85.526 76 8 2 2859 2931 765095793 765095718 4.040000e-10 76.8
21 TraesCS1D01G100700 chr2A 88.235 51 5 1 3172 3222 171968294 171968343 4.070000e-05 60.2
22 TraesCS1D01G100700 chr4A 82.941 170 19 7 2851 3010 621642380 621642211 1.090000e-30 145.0
23 TraesCS1D01G100700 chr3D 90.769 65 6 0 2851 2915 505973298 505973362 1.870000e-13 87.9
24 TraesCS1D01G100700 chr7A 80.488 82 11 2 3548 3629 675125367 675125291 1.460000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G100700 chr1D 88222779 88226551 3772 False 6968.000000 6968 100.000000 1 3773 1 chr1D.!!$F1 3772
1 TraesCS1D01G100700 chr1A 84724741 84730325 5584 False 1507.333333 3524 92.766667 3 3314 3 chr1A.!!$F3 3311
2 TraesCS1D01G100700 chr1B 142106486 142109599 3113 False 995.500000 2998 92.057000 3 2957 4 chr1B.!!$F2 2954

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
447 988 0.459899 TAGCACAGGACGGCATAGTG 59.540 55.000 0.0 0.0 0.0 2.74 F
986 3359 1.021202 CTCAGCTCTCTCCGTACCAG 58.979 60.000 0.0 0.0 0.0 4.00 F
1993 4398 1.707117 CGACGTATTGCTATCGGTTCG 59.293 52.381 0.0 0.0 0.0 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1993 4398 0.743097 GATGCCATGGAACTCTTGCC 59.257 55.000 18.40 0.0 0.00 4.52 R
2493 4909 1.000612 ACCCTCGAGGAACCTCTCC 59.999 63.158 33.39 0.0 45.81 3.71 R
3190 5624 0.242825 TAGAGTCTTCCGCAACACCG 59.757 55.000 0.00 0.0 0.00 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
447 988 0.459899 TAGCACAGGACGGCATAGTG 59.540 55.000 0.00 0.00 0.00 2.74
454 995 1.066858 AGGACGGCATAGTGTTGACTG 60.067 52.381 0.00 0.00 33.21 3.51
466 1007 2.942796 TTGACTGCAGGCGTCCGAT 61.943 57.895 19.93 0.00 0.00 4.18
638 1179 5.347342 TGTGTGCAAAATTTCAAGACGAAT 58.653 33.333 0.00 0.00 32.32 3.34
790 3028 1.440145 GCCGGAGCTCCATTTAGCAC 61.440 60.000 31.67 7.93 45.30 4.40
986 3359 1.021202 CTCAGCTCTCTCCGTACCAG 58.979 60.000 0.00 0.00 0.00 4.00
1021 3410 4.262036 CCATGGCTCGCTATGTAGAAGTAA 60.262 45.833 13.11 0.00 33.79 2.24
1030 3419 8.625786 TCGCTATGTAGAAGTAATGTACCATA 57.374 34.615 0.00 0.00 0.00 2.74
1038 3427 7.969536 AGAAGTAATGTACCATATCATGCAC 57.030 36.000 0.00 0.00 0.00 4.57
1044 3433 3.454082 TGTACCATATCATGCACCAGACA 59.546 43.478 0.00 0.00 0.00 3.41
1060 3449 3.258372 CCAGACACCTCTACAGCTACAAA 59.742 47.826 0.00 0.00 0.00 2.83
1097 3486 4.134563 TCGCTCATCATACTACTACTGCA 58.865 43.478 0.00 0.00 0.00 4.41
1098 3487 4.023963 TCGCTCATCATACTACTACTGCAC 60.024 45.833 0.00 0.00 0.00 4.57
1497 3901 4.812476 TTCCGCATCGCCCGTCAG 62.812 66.667 0.00 0.00 0.00 3.51
1562 3967 8.778141 TCGTGAGAATAATGAAGAACGTATAC 57.222 34.615 0.00 0.00 37.03 1.47
1571 3976 3.982701 TGAAGAACGTATACACACAACCG 59.017 43.478 3.32 0.00 0.00 4.44
1676 4081 2.841389 GTGGTGAACACGTACGCG 59.159 61.111 16.72 8.78 40.85 6.01
1716 4121 2.325761 CTGTGTCGGGTAAGTTCTTCG 58.674 52.381 0.00 0.00 0.00 3.79
1979 4384 3.597255 AGAGAGTGACTTCATCGACGTA 58.403 45.455 0.00 0.00 0.00 3.57
1993 4398 1.707117 CGACGTATTGCTATCGGTTCG 59.293 52.381 0.00 0.00 0.00 3.95
2003 4408 2.194271 CTATCGGTTCGGCAAGAGTTC 58.806 52.381 0.00 0.00 0.00 3.01
2205 4621 3.853487 ATGGCCGAGCTCATGCGA 61.853 61.111 15.40 13.12 45.42 5.10
2207 4623 3.267860 GGCCGAGCTCATGCGAAG 61.268 66.667 15.40 0.00 45.42 3.79
2269 4685 2.125793 GTACTCCCGCCGGACAAC 60.126 66.667 5.05 0.00 33.32 3.32
2346 4762 3.670637 GACGCTCAGGCTGCATCCA 62.671 63.158 10.34 0.00 36.09 3.41
2349 4765 2.124403 CTCAGGCTGCATCCACCC 60.124 66.667 10.34 0.00 0.00 4.61
2465 4881 2.833151 ATTGGCAGAGACCCCGGGTA 62.833 60.000 21.85 0.00 35.25 3.69
2515 4931 4.452733 GGTTCCTCGAGGGTGGCG 62.453 72.222 30.80 4.60 36.25 5.69
2605 5021 2.434359 CCGGTCTCAACTTCGGGC 60.434 66.667 0.00 0.00 38.93 6.13
2686 5102 1.179174 CGGCATGGAGAGGGACGATA 61.179 60.000 0.00 0.00 0.00 2.92
2687 5103 1.048601 GGCATGGAGAGGGACGATAA 58.951 55.000 0.00 0.00 0.00 1.75
2688 5104 1.416401 GGCATGGAGAGGGACGATAAA 59.584 52.381 0.00 0.00 0.00 1.40
2811 5227 4.694982 TCCATATTTGTATACCGCTGCATG 59.305 41.667 0.00 0.00 0.00 4.06
2812 5228 4.406069 CATATTTGTATACCGCTGCATGC 58.594 43.478 11.82 11.82 38.57 4.06
2847 5265 5.130350 ACAAGGCAAAACATAGTGTGTAGT 58.870 37.500 0.00 0.00 41.14 2.73
2849 5267 4.324267 AGGCAAAACATAGTGTGTAGTCC 58.676 43.478 0.00 0.00 41.14 3.85
2994 5424 2.410939 CATCCTATGATGCACAGACCG 58.589 52.381 0.00 0.00 41.81 4.79
2995 5425 1.485124 TCCTATGATGCACAGACCGT 58.515 50.000 0.00 0.00 0.00 4.83
2997 5427 1.575244 CTATGATGCACAGACCGTGG 58.425 55.000 0.00 0.00 46.45 4.94
3002 5432 1.933853 GATGCACAGACCGTGGTAATC 59.066 52.381 0.00 0.00 46.45 1.75
3003 5433 0.036765 TGCACAGACCGTGGTAATCC 60.037 55.000 0.00 0.00 46.45 3.01
3005 5435 1.479323 GCACAGACCGTGGTAATCCTA 59.521 52.381 0.00 0.00 46.45 2.94
3010 5440 6.342906 CACAGACCGTGGTAATCCTATTTTA 58.657 40.000 0.00 0.00 42.34 1.52
3012 5442 7.497909 CACAGACCGTGGTAATCCTATTTTAAT 59.502 37.037 0.00 0.00 42.34 1.40
3013 5443 8.050930 ACAGACCGTGGTAATCCTATTTTAATT 58.949 33.333 0.00 0.00 34.23 1.40
3014 5444 8.899771 CAGACCGTGGTAATCCTATTTTAATTT 58.100 33.333 0.00 0.00 34.23 1.82
3015 5445 9.470399 AGACCGTGGTAATCCTATTTTAATTTT 57.530 29.630 0.00 0.00 34.23 1.82
3054 5488 2.845363 TAAGGAGGTGGGTTCGAAAC 57.155 50.000 4.08 4.08 0.00 2.78
3058 5492 1.235724 GAGGTGGGTTCGAAACAAGG 58.764 55.000 16.38 0.00 0.00 3.61
3100 5534 1.550327 AGAGGTCATCACTCTCGCAA 58.450 50.000 0.00 0.00 41.26 4.85
3112 5546 8.360390 TCATCACTCTCGCAACATTATATTACT 58.640 33.333 0.00 0.00 0.00 2.24
3113 5547 8.642885 CATCACTCTCGCAACATTATATTACTC 58.357 37.037 0.00 0.00 0.00 2.59
3122 5556 8.432359 CGCAACATTATATTACTCGATTGCTTA 58.568 33.333 9.45 0.00 38.17 3.09
3132 5566 0.652592 CGATTGCTTAGCACCCGAAG 59.347 55.000 18.20 0.44 38.71 3.79
3142 5576 1.659794 CACCCGAAGCACCCAAAAG 59.340 57.895 0.00 0.00 0.00 2.27
3161 5595 2.183679 AGCTCACTTCCTCCTTGGTAG 58.816 52.381 0.00 0.00 38.93 3.18
3170 5604 1.609061 CCTCCTTGGTAGTGTGCACAG 60.609 57.143 22.40 6.39 0.00 3.66
3176 5610 0.105964 GGTAGTGTGCACAGTGACCA 59.894 55.000 32.67 13.61 0.00 4.02
3178 5612 2.028476 GGTAGTGTGCACAGTGACCATA 60.028 50.000 32.67 12.51 0.00 2.74
3180 5614 1.002430 AGTGTGCACAGTGACCATAGG 59.998 52.381 26.11 0.00 0.00 2.57
3181 5615 1.055849 TGTGCACAGTGACCATAGGT 58.944 50.000 17.42 0.00 39.44 3.08
3182 5616 2.028476 GTGTGCACAGTGACCATAGGTA 60.028 50.000 22.40 0.00 35.25 3.08
3184 5618 1.831106 TGCACAGTGACCATAGGTAGG 59.169 52.381 4.15 0.00 35.25 3.18
3186 5620 1.762957 CACAGTGACCATAGGTAGGGG 59.237 57.143 0.00 0.00 35.25 4.79
3190 5624 2.047769 GACCATAGGTAGGGGTCGC 58.952 63.158 0.00 0.00 41.43 5.19
3192 5626 2.571216 CCATAGGTAGGGGTCGCGG 61.571 68.421 6.13 0.00 0.00 6.46
3193 5627 1.831286 CATAGGTAGGGGTCGCGGT 60.831 63.158 6.13 0.00 0.00 5.68
3194 5628 1.831286 ATAGGTAGGGGTCGCGGTG 60.831 63.158 6.13 0.00 0.00 4.94
3196 5630 2.786512 TAGGTAGGGGTCGCGGTGTT 62.787 60.000 6.13 0.00 0.00 3.32
3197 5631 2.433664 GTAGGGGTCGCGGTGTTG 60.434 66.667 6.13 0.00 0.00 3.33
3198 5632 4.382320 TAGGGGTCGCGGTGTTGC 62.382 66.667 6.13 0.00 0.00 4.17
3210 5644 1.732732 CGGTGTTGCGGAAGACTCTAG 60.733 57.143 16.24 3.01 0.00 2.43
3219 5653 3.181485 GCGGAAGACTCTAGCATTACACT 60.181 47.826 0.00 0.00 0.00 3.55
3225 5659 4.647399 AGACTCTAGCATTACACTCCTTCC 59.353 45.833 0.00 0.00 0.00 3.46
3236 5670 7.917505 GCATTACACTCCTTCCATAATTTTCAG 59.082 37.037 0.00 0.00 0.00 3.02
3241 5675 4.536765 TCCTTCCATAATTTTCAGGAGGC 58.463 43.478 0.00 0.00 0.00 4.70
3248 5687 3.604875 AATTTTCAGGAGGCAAGCATG 57.395 42.857 0.00 0.00 0.00 4.06
3258 5697 1.005097 AGGCAAGCATGAACATGGAGA 59.995 47.619 15.15 0.00 39.16 3.71
3272 5711 3.505480 ATGGAGATCATGGCTTTCCTC 57.495 47.619 0.00 0.00 34.22 3.71
3273 5712 1.139654 TGGAGATCATGGCTTTCCTCG 59.860 52.381 0.00 0.00 0.00 4.63
3292 5731 1.734465 CGAGTGAGAACAAGATTGGGC 59.266 52.381 0.00 0.00 0.00 5.36
3295 5734 3.760684 GAGTGAGAACAAGATTGGGCAAT 59.239 43.478 0.00 0.00 0.00 3.56
3314 5753 4.824289 CAATCCCAATCCTCCAAACTTTG 58.176 43.478 0.00 0.00 0.00 2.77
3315 5754 3.893753 TCCCAATCCTCCAAACTTTGA 57.106 42.857 2.87 0.00 0.00 2.69
3316 5755 3.496331 TCCCAATCCTCCAAACTTTGAC 58.504 45.455 2.87 0.00 0.00 3.18
3317 5756 2.228822 CCCAATCCTCCAAACTTTGACG 59.771 50.000 2.87 0.00 0.00 4.35
3318 5757 3.146066 CCAATCCTCCAAACTTTGACGA 58.854 45.455 2.87 0.00 0.00 4.20
3319 5758 3.758554 CCAATCCTCCAAACTTTGACGAT 59.241 43.478 2.87 0.00 0.00 3.73
3320 5759 4.218417 CCAATCCTCCAAACTTTGACGATT 59.782 41.667 2.87 4.53 0.00 3.34
3321 5760 5.393962 CAATCCTCCAAACTTTGACGATTC 58.606 41.667 2.87 0.00 0.00 2.52
3322 5761 4.351874 TCCTCCAAACTTTGACGATTCT 57.648 40.909 2.87 0.00 0.00 2.40
3323 5762 4.714632 TCCTCCAAACTTTGACGATTCTT 58.285 39.130 2.87 0.00 0.00 2.52
3324 5763 5.860611 TCCTCCAAACTTTGACGATTCTTA 58.139 37.500 2.87 0.00 0.00 2.10
3325 5764 6.472887 TCCTCCAAACTTTGACGATTCTTAT 58.527 36.000 2.87 0.00 0.00 1.73
3326 5765 6.371548 TCCTCCAAACTTTGACGATTCTTATG 59.628 38.462 2.87 0.00 0.00 1.90
3327 5766 6.371548 CCTCCAAACTTTGACGATTCTTATGA 59.628 38.462 2.87 0.00 0.00 2.15
3328 5767 7.066284 CCTCCAAACTTTGACGATTCTTATGAT 59.934 37.037 2.87 0.00 0.00 2.45
3329 5768 8.335532 TCCAAACTTTGACGATTCTTATGATT 57.664 30.769 2.87 0.00 0.00 2.57
3330 5769 8.792633 TCCAAACTTTGACGATTCTTATGATTT 58.207 29.630 2.87 0.00 0.00 2.17
3334 5773 9.449719 AACTTTGACGATTCTTATGATTTAGGT 57.550 29.630 0.00 0.00 0.00 3.08
3335 5774 8.883731 ACTTTGACGATTCTTATGATTTAGGTG 58.116 33.333 0.00 0.00 0.00 4.00
3336 5775 6.844696 TGACGATTCTTATGATTTAGGTGC 57.155 37.500 0.00 0.00 0.00 5.01
3337 5776 6.345298 TGACGATTCTTATGATTTAGGTGCA 58.655 36.000 0.00 0.00 0.00 4.57
3338 5777 6.992123 TGACGATTCTTATGATTTAGGTGCAT 59.008 34.615 0.00 0.00 0.00 3.96
3339 5778 7.041848 TGACGATTCTTATGATTTAGGTGCATG 60.042 37.037 0.00 0.00 0.00 4.06
3340 5779 6.767902 ACGATTCTTATGATTTAGGTGCATGT 59.232 34.615 0.00 0.00 0.00 3.21
3341 5780 7.073883 CGATTCTTATGATTTAGGTGCATGTG 58.926 38.462 0.00 0.00 0.00 3.21
3342 5781 5.756195 TCTTATGATTTAGGTGCATGTGC 57.244 39.130 0.00 0.00 42.50 4.57
3366 5805 7.558435 CAACATTTGCTATCACTTCAGTTTC 57.442 36.000 0.00 0.00 0.00 2.78
3367 5806 6.882610 ACATTTGCTATCACTTCAGTTTCA 57.117 33.333 0.00 0.00 0.00 2.69
3368 5807 7.458409 ACATTTGCTATCACTTCAGTTTCAT 57.542 32.000 0.00 0.00 0.00 2.57
3369 5808 7.533426 ACATTTGCTATCACTTCAGTTTCATC 58.467 34.615 0.00 0.00 0.00 2.92
3370 5809 5.784750 TTGCTATCACTTCAGTTTCATCG 57.215 39.130 0.00 0.00 0.00 3.84
3371 5810 5.072040 TGCTATCACTTCAGTTTCATCGA 57.928 39.130 0.00 0.00 0.00 3.59
3372 5811 5.664457 TGCTATCACTTCAGTTTCATCGAT 58.336 37.500 0.00 0.00 0.00 3.59
3373 5812 6.108687 TGCTATCACTTCAGTTTCATCGATT 58.891 36.000 0.00 0.00 0.00 3.34
3374 5813 6.036408 TGCTATCACTTCAGTTTCATCGATTG 59.964 38.462 0.00 0.00 0.00 2.67
3375 5814 6.256539 GCTATCACTTCAGTTTCATCGATTGA 59.743 38.462 0.00 0.00 0.00 2.57
3376 5815 6.659361 ATCACTTCAGTTTCATCGATTGAG 57.341 37.500 0.00 0.00 35.27 3.02
3377 5816 4.931601 TCACTTCAGTTTCATCGATTGAGG 59.068 41.667 0.00 0.00 35.27 3.86
3378 5817 4.931601 CACTTCAGTTTCATCGATTGAGGA 59.068 41.667 11.72 0.00 35.27 3.71
3379 5818 5.583854 CACTTCAGTTTCATCGATTGAGGAT 59.416 40.000 11.72 0.00 34.43 3.24
3380 5819 6.758416 CACTTCAGTTTCATCGATTGAGGATA 59.242 38.462 11.72 0.00 34.43 2.59
3381 5820 7.440556 CACTTCAGTTTCATCGATTGAGGATAT 59.559 37.037 11.72 0.00 34.43 1.63
3382 5821 7.440556 ACTTCAGTTTCATCGATTGAGGATATG 59.559 37.037 11.72 0.00 34.43 1.78
3383 5822 6.226052 TCAGTTTCATCGATTGAGGATATGG 58.774 40.000 0.00 0.00 34.43 2.74
3384 5823 5.410746 CAGTTTCATCGATTGAGGATATGGG 59.589 44.000 0.00 0.00 34.43 4.00
3385 5824 5.072329 AGTTTCATCGATTGAGGATATGGGT 59.928 40.000 0.00 0.00 34.43 4.51
3386 5825 5.567037 TTCATCGATTGAGGATATGGGTT 57.433 39.130 0.00 0.00 34.43 4.11
3387 5826 5.567037 TCATCGATTGAGGATATGGGTTT 57.433 39.130 0.00 0.00 28.20 3.27
3388 5827 5.940617 TCATCGATTGAGGATATGGGTTTT 58.059 37.500 0.00 0.00 28.20 2.43
3389 5828 5.997746 TCATCGATTGAGGATATGGGTTTTC 59.002 40.000 0.00 0.00 28.20 2.29
3390 5829 5.366482 TCGATTGAGGATATGGGTTTTCA 57.634 39.130 0.00 0.00 0.00 2.69
3391 5830 5.750524 TCGATTGAGGATATGGGTTTTCAA 58.249 37.500 0.00 0.00 0.00 2.69
3392 5831 6.184068 TCGATTGAGGATATGGGTTTTCAAA 58.816 36.000 0.00 0.00 0.00 2.69
3393 5832 6.661377 TCGATTGAGGATATGGGTTTTCAAAA 59.339 34.615 0.00 0.00 0.00 2.44
3394 5833 7.177568 TCGATTGAGGATATGGGTTTTCAAAAA 59.822 33.333 0.00 0.00 0.00 1.94
3395 5834 7.981225 CGATTGAGGATATGGGTTTTCAAAAAT 59.019 33.333 0.00 0.00 0.00 1.82
3396 5835 9.101655 GATTGAGGATATGGGTTTTCAAAAATG 57.898 33.333 0.00 0.00 0.00 2.32
3397 5836 7.552050 TGAGGATATGGGTTTTCAAAAATGT 57.448 32.000 0.00 0.00 0.00 2.71
3398 5837 7.972301 TGAGGATATGGGTTTTCAAAAATGTT 58.028 30.769 0.00 0.00 0.00 2.71
3399 5838 8.435982 TGAGGATATGGGTTTTCAAAAATGTTT 58.564 29.630 0.00 0.00 0.00 2.83
3400 5839 8.846943 AGGATATGGGTTTTCAAAAATGTTTC 57.153 30.769 0.00 0.00 0.00 2.78
3401 5840 8.435982 AGGATATGGGTTTTCAAAAATGTTTCA 58.564 29.630 0.00 0.00 0.00 2.69
3402 5841 9.061435 GGATATGGGTTTTCAAAAATGTTTCAA 57.939 29.630 0.00 0.00 0.00 2.69
3406 5845 9.625747 ATGGGTTTTCAAAAATGTTTCAATACT 57.374 25.926 0.00 0.00 0.00 2.12
3417 5856 9.553064 AAAATGTTTCAATACTATTTGTTGGCA 57.447 25.926 0.00 0.00 0.00 4.92
3418 5857 8.761575 AATGTTTCAATACTATTTGTTGGCAG 57.238 30.769 0.00 0.00 0.00 4.85
3419 5858 7.283625 TGTTTCAATACTATTTGTTGGCAGT 57.716 32.000 0.00 0.00 0.00 4.40
3420 5859 8.397575 TGTTTCAATACTATTTGTTGGCAGTA 57.602 30.769 0.00 0.00 0.00 2.74
3421 5860 8.511321 TGTTTCAATACTATTTGTTGGCAGTAG 58.489 33.333 0.00 0.00 0.00 2.57
3422 5861 6.677781 TCAATACTATTTGTTGGCAGTAGC 57.322 37.500 0.00 0.00 41.10 3.58
3450 5889 7.496529 GAGCTGTACTCATTATGGCAATTAA 57.503 36.000 0.00 0.00 45.49 1.40
3451 5890 7.264373 AGCTGTACTCATTATGGCAATTAAC 57.736 36.000 0.00 0.00 0.00 2.01
3452 5891 6.828273 AGCTGTACTCATTATGGCAATTAACA 59.172 34.615 0.00 0.00 0.00 2.41
3453 5892 7.503566 AGCTGTACTCATTATGGCAATTAACAT 59.496 33.333 0.00 0.49 0.00 2.71
3454 5893 8.137437 GCTGTACTCATTATGGCAATTAACATT 58.863 33.333 0.00 0.00 0.00 2.71
3455 5894 9.454585 CTGTACTCATTATGGCAATTAACATTG 57.545 33.333 0.00 0.00 42.60 2.82
3456 5895 9.183368 TGTACTCATTATGGCAATTAACATTGA 57.817 29.630 0.00 0.00 42.35 2.57
3458 5897 7.491682 ACTCATTATGGCAATTAACATTGACC 58.508 34.615 0.00 1.09 46.88 4.02
3459 5898 7.123997 ACTCATTATGGCAATTAACATTGACCA 59.876 33.333 11.16 11.16 46.88 4.02
3460 5899 8.020777 TCATTATGGCAATTAACATTGACCAT 57.979 30.769 19.06 19.06 46.88 3.55
3461 5900 9.140874 TCATTATGGCAATTAACATTGACCATA 57.859 29.630 17.78 17.78 46.88 2.74
3464 5903 6.849085 TGGCAATTAACATTGACCATAACT 57.151 33.333 0.00 0.00 46.88 2.24
3465 5904 7.238486 TGGCAATTAACATTGACCATAACTT 57.762 32.000 0.00 0.00 46.88 2.66
3466 5905 7.319646 TGGCAATTAACATTGACCATAACTTC 58.680 34.615 0.00 0.00 46.88 3.01
3467 5906 7.039434 TGGCAATTAACATTGACCATAACTTCA 60.039 33.333 0.00 0.00 46.88 3.02
3468 5907 7.816995 GGCAATTAACATTGACCATAACTTCAA 59.183 33.333 0.00 0.00 42.11 2.69
3469 5908 9.369904 GCAATTAACATTGACCATAACTTCAAT 57.630 29.630 0.00 0.00 42.35 2.57
3473 5912 7.645058 AACATTGACCATAACTTCAATAGGG 57.355 36.000 0.00 0.00 39.86 3.53
3474 5913 6.969043 ACATTGACCATAACTTCAATAGGGA 58.031 36.000 0.00 0.00 39.86 4.20
3475 5914 6.828785 ACATTGACCATAACTTCAATAGGGAC 59.171 38.462 0.00 0.00 39.86 4.46
3476 5915 6.381498 TTGACCATAACTTCAATAGGGACA 57.619 37.500 0.00 0.00 29.59 4.02
3477 5916 5.989477 TGACCATAACTTCAATAGGGACAG 58.011 41.667 0.00 0.00 28.61 3.51
3478 5917 5.487488 TGACCATAACTTCAATAGGGACAGT 59.513 40.000 0.00 0.00 28.61 3.55
3479 5918 6.670464 TGACCATAACTTCAATAGGGACAGTA 59.330 38.462 0.00 0.00 28.61 2.74
3480 5919 7.181305 TGACCATAACTTCAATAGGGACAGTAA 59.819 37.037 0.00 0.00 28.61 2.24
3481 5920 7.924541 ACCATAACTTCAATAGGGACAGTAAA 58.075 34.615 0.00 0.00 0.00 2.01
3482 5921 8.387813 ACCATAACTTCAATAGGGACAGTAAAA 58.612 33.333 0.00 0.00 0.00 1.52
3483 5922 9.408648 CCATAACTTCAATAGGGACAGTAAAAT 57.591 33.333 0.00 0.00 0.00 1.82
3486 5925 8.934023 AACTTCAATAGGGACAGTAAAATGAA 57.066 30.769 0.00 0.00 0.00 2.57
3487 5926 9.533831 AACTTCAATAGGGACAGTAAAATGAAT 57.466 29.630 0.00 0.00 0.00 2.57
3488 5927 8.960591 ACTTCAATAGGGACAGTAAAATGAATG 58.039 33.333 0.00 0.00 0.00 2.67
3489 5928 7.880160 TCAATAGGGACAGTAAAATGAATGG 57.120 36.000 0.00 0.00 0.00 3.16
3490 5929 7.638444 TCAATAGGGACAGTAAAATGAATGGA 58.362 34.615 0.00 0.00 0.00 3.41
3491 5930 8.112822 TCAATAGGGACAGTAAAATGAATGGAA 58.887 33.333 0.00 0.00 0.00 3.53
3492 5931 7.881775 ATAGGGACAGTAAAATGAATGGAAC 57.118 36.000 0.00 0.00 0.00 3.62
3493 5932 5.892348 AGGGACAGTAAAATGAATGGAACT 58.108 37.500 0.00 0.00 0.00 3.01
3494 5933 6.314917 AGGGACAGTAAAATGAATGGAACTT 58.685 36.000 0.00 0.00 0.00 2.66
3495 5934 6.209391 AGGGACAGTAAAATGAATGGAACTTG 59.791 38.462 0.00 0.00 0.00 3.16
3496 5935 6.015434 GGGACAGTAAAATGAATGGAACTTGT 60.015 38.462 0.00 0.00 0.00 3.16
3497 5936 7.433680 GGACAGTAAAATGAATGGAACTTGTT 58.566 34.615 0.00 0.00 0.00 2.83
3498 5937 7.926018 GGACAGTAAAATGAATGGAACTTGTTT 59.074 33.333 0.00 0.00 0.00 2.83
3499 5938 9.959749 GACAGTAAAATGAATGGAACTTGTTTA 57.040 29.630 0.00 0.00 0.00 2.01
3505 5944 9.883142 AAAATGAATGGAACTTGTTTAACTGAA 57.117 25.926 0.00 0.00 0.00 3.02
3507 5946 9.696917 AATGAATGGAACTTGTTTAACTGAATC 57.303 29.630 0.00 0.00 0.00 2.52
3508 5947 7.657336 TGAATGGAACTTGTTTAACTGAATCC 58.343 34.615 0.00 0.83 0.00 3.01
3509 5948 7.505585 TGAATGGAACTTGTTTAACTGAATCCT 59.494 33.333 0.00 0.00 0.00 3.24
3510 5949 7.839680 ATGGAACTTGTTTAACTGAATCCTT 57.160 32.000 0.00 0.00 0.00 3.36
3511 5950 8.934023 ATGGAACTTGTTTAACTGAATCCTTA 57.066 30.769 0.00 0.00 0.00 2.69
3512 5951 8.754991 TGGAACTTGTTTAACTGAATCCTTAA 57.245 30.769 0.00 0.00 0.00 1.85
3513 5952 9.362151 TGGAACTTGTTTAACTGAATCCTTAAT 57.638 29.630 0.00 0.00 0.00 1.40
3516 5955 9.981114 AACTTGTTTAACTGAATCCTTAATTGG 57.019 29.630 0.00 0.00 0.00 3.16
3517 5956 9.143155 ACTTGTTTAACTGAATCCTTAATTGGT 57.857 29.630 0.00 0.00 0.00 3.67
3518 5957 9.981114 CTTGTTTAACTGAATCCTTAATTGGTT 57.019 29.630 0.00 0.00 0.00 3.67
3520 5959 9.757227 TGTTTAACTGAATCCTTAATTGGTTTG 57.243 29.630 0.00 0.00 0.00 2.93
3521 5960 9.203421 GTTTAACTGAATCCTTAATTGGTTTGG 57.797 33.333 0.00 0.00 0.00 3.28
3522 5961 6.994421 AACTGAATCCTTAATTGGTTTGGT 57.006 33.333 0.00 0.00 0.00 3.67
3523 5962 6.590234 ACTGAATCCTTAATTGGTTTGGTC 57.410 37.500 0.00 0.00 0.00 4.02
3524 5963 6.074648 ACTGAATCCTTAATTGGTTTGGTCA 58.925 36.000 0.00 0.00 0.00 4.02
3525 5964 6.553100 ACTGAATCCTTAATTGGTTTGGTCAA 59.447 34.615 0.00 0.00 0.00 3.18
3526 5965 6.991938 TGAATCCTTAATTGGTTTGGTCAAG 58.008 36.000 0.00 0.00 0.00 3.02
3527 5966 6.553100 TGAATCCTTAATTGGTTTGGTCAAGT 59.447 34.615 0.00 0.00 0.00 3.16
3528 5967 6.590234 ATCCTTAATTGGTTTGGTCAAGTC 57.410 37.500 0.00 0.00 0.00 3.01
3529 5968 5.450453 TCCTTAATTGGTTTGGTCAAGTCA 58.550 37.500 0.00 0.00 0.00 3.41
3530 5969 5.894393 TCCTTAATTGGTTTGGTCAAGTCAA 59.106 36.000 0.00 0.00 0.00 3.18
3531 5970 6.040391 TCCTTAATTGGTTTGGTCAAGTCAAG 59.960 38.462 0.00 0.00 0.00 3.02
3532 5971 6.040391 CCTTAATTGGTTTGGTCAAGTCAAGA 59.960 38.462 0.00 0.00 0.00 3.02
3533 5972 7.255942 CCTTAATTGGTTTGGTCAAGTCAAGAT 60.256 37.037 0.00 3.08 0.00 2.40
3534 5973 6.484364 AATTGGTTTGGTCAAGTCAAGATT 57.516 33.333 6.82 0.00 0.00 2.40
3535 5974 5.930837 TTGGTTTGGTCAAGTCAAGATTT 57.069 34.783 0.00 0.00 0.00 2.17
3536 5975 7.595819 ATTGGTTTGGTCAAGTCAAGATTTA 57.404 32.000 6.82 0.00 0.00 1.40
3537 5976 6.633500 TGGTTTGGTCAAGTCAAGATTTAG 57.367 37.500 0.00 0.00 0.00 1.85
3538 5977 6.361433 TGGTTTGGTCAAGTCAAGATTTAGA 58.639 36.000 0.00 0.00 0.00 2.10
3539 5978 7.004086 TGGTTTGGTCAAGTCAAGATTTAGAT 58.996 34.615 0.00 0.00 0.00 1.98
3540 5979 7.505585 TGGTTTGGTCAAGTCAAGATTTAGATT 59.494 33.333 0.00 0.00 0.00 2.40
3541 5980 9.010029 GGTTTGGTCAAGTCAAGATTTAGATTA 57.990 33.333 0.00 0.00 0.00 1.75
3543 5982 9.793259 TTTGGTCAAGTCAAGATTTAGATTAGT 57.207 29.630 0.00 0.00 0.00 2.24
3544 5983 9.793259 TTGGTCAAGTCAAGATTTAGATTAGTT 57.207 29.630 0.00 0.00 0.00 2.24
3554 5993 8.756864 CAAGATTTAGATTAGTTAGAACTCCGC 58.243 37.037 0.00 0.00 40.37 5.54
3555 5994 8.008513 AGATTTAGATTAGTTAGAACTCCGCA 57.991 34.615 0.00 0.00 40.37 5.69
3556 5995 7.921745 AGATTTAGATTAGTTAGAACTCCGCAC 59.078 37.037 0.00 0.00 40.37 5.34
3557 5996 6.770746 TTAGATTAGTTAGAACTCCGCACT 57.229 37.500 0.00 0.00 40.37 4.40
3558 5997 5.000012 AGATTAGTTAGAACTCCGCACTG 58.000 43.478 0.00 0.00 40.37 3.66
3559 5998 2.649331 TAGTTAGAACTCCGCACTGC 57.351 50.000 0.00 0.00 40.37 4.40
3560 5999 0.969894 AGTTAGAACTCCGCACTGCT 59.030 50.000 0.00 0.00 32.86 4.24
3561 6000 1.067495 AGTTAGAACTCCGCACTGCTC 60.067 52.381 0.00 0.00 32.86 4.26
3562 6001 1.067495 GTTAGAACTCCGCACTGCTCT 60.067 52.381 0.00 0.00 0.00 4.09
3563 6002 1.257743 TAGAACTCCGCACTGCTCTT 58.742 50.000 0.00 0.00 0.00 2.85
3564 6003 1.257743 AGAACTCCGCACTGCTCTTA 58.742 50.000 0.00 0.00 0.00 2.10
3565 6004 1.203523 AGAACTCCGCACTGCTCTTAG 59.796 52.381 0.00 0.00 0.00 2.18
3566 6005 1.202582 GAACTCCGCACTGCTCTTAGA 59.797 52.381 0.00 0.00 0.00 2.10
3567 6006 1.257743 ACTCCGCACTGCTCTTAGAA 58.742 50.000 0.00 0.00 0.00 2.10
3568 6007 1.067495 ACTCCGCACTGCTCTTAGAAC 60.067 52.381 0.00 0.00 0.00 3.01
3569 6008 0.966179 TCCGCACTGCTCTTAGAACA 59.034 50.000 0.00 0.00 0.00 3.18
3570 6009 1.343142 TCCGCACTGCTCTTAGAACAA 59.657 47.619 0.00 0.00 0.00 2.83
3571 6010 2.143122 CCGCACTGCTCTTAGAACAAA 58.857 47.619 0.00 0.00 0.00 2.83
3572 6011 2.744202 CCGCACTGCTCTTAGAACAAAT 59.256 45.455 0.00 0.00 0.00 2.32
3573 6012 3.932710 CCGCACTGCTCTTAGAACAAATA 59.067 43.478 0.00 0.00 0.00 1.40
3574 6013 4.572389 CCGCACTGCTCTTAGAACAAATAT 59.428 41.667 0.00 0.00 0.00 1.28
3575 6014 5.277058 CCGCACTGCTCTTAGAACAAATATC 60.277 44.000 0.00 0.00 0.00 1.63
3576 6015 5.555256 CGCACTGCTCTTAGAACAAATATCG 60.555 44.000 0.00 0.00 0.00 2.92
3577 6016 5.292101 GCACTGCTCTTAGAACAAATATCGT 59.708 40.000 0.00 0.00 0.00 3.73
3578 6017 6.508721 GCACTGCTCTTAGAACAAATATCGTC 60.509 42.308 0.00 0.00 0.00 4.20
3579 6018 6.754209 CACTGCTCTTAGAACAAATATCGTCT 59.246 38.462 0.00 0.00 0.00 4.18
3580 6019 6.975772 ACTGCTCTTAGAACAAATATCGTCTC 59.024 38.462 0.00 0.00 0.00 3.36
3581 6020 6.273825 TGCTCTTAGAACAAATATCGTCTCC 58.726 40.000 0.00 0.00 0.00 3.71
3582 6021 6.127451 TGCTCTTAGAACAAATATCGTCTCCA 60.127 38.462 0.00 0.00 0.00 3.86
3583 6022 6.757010 GCTCTTAGAACAAATATCGTCTCCAA 59.243 38.462 0.00 0.00 0.00 3.53
3584 6023 7.254151 GCTCTTAGAACAAATATCGTCTCCAAC 60.254 40.741 0.00 0.00 0.00 3.77
3585 6024 7.608153 TCTTAGAACAAATATCGTCTCCAACA 58.392 34.615 0.00 0.00 0.00 3.33
3586 6025 8.092068 TCTTAGAACAAATATCGTCTCCAACAA 58.908 33.333 0.00 0.00 0.00 2.83
3587 6026 6.481954 AGAACAAATATCGTCTCCAACAAC 57.518 37.500 0.00 0.00 0.00 3.32
3588 6027 5.995282 AGAACAAATATCGTCTCCAACAACA 59.005 36.000 0.00 0.00 0.00 3.33
3589 6028 6.655003 AGAACAAATATCGTCTCCAACAACAT 59.345 34.615 0.00 0.00 0.00 2.71
3590 6029 6.422776 ACAAATATCGTCTCCAACAACATC 57.577 37.500 0.00 0.00 0.00 3.06
3591 6030 5.937540 ACAAATATCGTCTCCAACAACATCA 59.062 36.000 0.00 0.00 0.00 3.07
3592 6031 6.128282 ACAAATATCGTCTCCAACAACATCAC 60.128 38.462 0.00 0.00 0.00 3.06
3593 6032 2.900716 TCGTCTCCAACAACATCACA 57.099 45.000 0.00 0.00 0.00 3.58
3594 6033 3.186702 TCGTCTCCAACAACATCACAA 57.813 42.857 0.00 0.00 0.00 3.33
3595 6034 2.869801 TCGTCTCCAACAACATCACAAC 59.130 45.455 0.00 0.00 0.00 3.32
3596 6035 2.611751 CGTCTCCAACAACATCACAACA 59.388 45.455 0.00 0.00 0.00 3.33
3597 6036 3.250762 CGTCTCCAACAACATCACAACAT 59.749 43.478 0.00 0.00 0.00 2.71
3598 6037 4.611355 CGTCTCCAACAACATCACAACATC 60.611 45.833 0.00 0.00 0.00 3.06
3599 6038 4.275689 GTCTCCAACAACATCACAACATCA 59.724 41.667 0.00 0.00 0.00 3.07
3600 6039 5.048504 GTCTCCAACAACATCACAACATCAT 60.049 40.000 0.00 0.00 0.00 2.45
3601 6040 6.149308 GTCTCCAACAACATCACAACATCATA 59.851 38.462 0.00 0.00 0.00 2.15
3602 6041 6.714356 TCTCCAACAACATCACAACATCATAA 59.286 34.615 0.00 0.00 0.00 1.90
3603 6042 6.676950 TCCAACAACATCACAACATCATAAC 58.323 36.000 0.00 0.00 0.00 1.89
3604 6043 6.264067 TCCAACAACATCACAACATCATAACA 59.736 34.615 0.00 0.00 0.00 2.41
3605 6044 6.363088 CCAACAACATCACAACATCATAACAC 59.637 38.462 0.00 0.00 0.00 3.32
3606 6045 5.688823 ACAACATCACAACATCATAACACG 58.311 37.500 0.00 0.00 0.00 4.49
3607 6046 5.468409 ACAACATCACAACATCATAACACGA 59.532 36.000 0.00 0.00 0.00 4.35
3608 6047 6.149308 ACAACATCACAACATCATAACACGAT 59.851 34.615 0.00 0.00 0.00 3.73
3609 6048 7.333174 ACAACATCACAACATCATAACACGATA 59.667 33.333 0.00 0.00 0.00 2.92
3610 6049 8.337532 CAACATCACAACATCATAACACGATAT 58.662 33.333 0.00 0.00 0.00 1.63
3611 6050 9.541143 AACATCACAACATCATAACACGATATA 57.459 29.630 0.00 0.00 0.00 0.86
3612 6051 9.710900 ACATCACAACATCATAACACGATATAT 57.289 29.630 0.00 0.00 0.00 0.86
3613 6052 9.962759 CATCACAACATCATAACACGATATATG 57.037 33.333 0.00 0.00 0.00 1.78
3614 6053 9.927668 ATCACAACATCATAACACGATATATGA 57.072 29.630 9.84 9.84 41.39 2.15
3615 6054 9.757227 TCACAACATCATAACACGATATATGAA 57.243 29.630 10.94 0.06 40.74 2.57
3642 6081 5.869753 AAAACATCATCGGAACTTCTCAG 57.130 39.130 0.00 0.00 0.00 3.35
3643 6082 4.808414 AACATCATCGGAACTTCTCAGA 57.192 40.909 0.00 0.00 32.45 3.27
3644 6083 5.350504 AACATCATCGGAACTTCTCAGAT 57.649 39.130 0.00 0.00 39.29 2.90
3645 6084 5.350504 ACATCATCGGAACTTCTCAGATT 57.649 39.130 0.00 0.00 36.91 2.40
3646 6085 5.355596 ACATCATCGGAACTTCTCAGATTC 58.644 41.667 0.00 0.00 36.91 2.52
3647 6086 5.105187 ACATCATCGGAACTTCTCAGATTCA 60.105 40.000 0.00 0.00 36.91 2.57
3648 6087 5.604758 TCATCGGAACTTCTCAGATTCAT 57.395 39.130 0.00 0.00 36.91 2.57
3649 6088 5.595885 TCATCGGAACTTCTCAGATTCATC 58.404 41.667 0.00 0.00 36.91 2.92
3650 6089 5.362143 TCATCGGAACTTCTCAGATTCATCT 59.638 40.000 0.00 0.00 36.91 2.90
3651 6090 5.667539 TCGGAACTTCTCAGATTCATCTT 57.332 39.130 0.00 0.00 34.22 2.40
3652 6091 5.414360 TCGGAACTTCTCAGATTCATCTTG 58.586 41.667 0.00 0.00 34.22 3.02
3653 6092 5.185828 TCGGAACTTCTCAGATTCATCTTGA 59.814 40.000 0.00 0.00 34.22 3.02
3654 6093 5.871524 CGGAACTTCTCAGATTCATCTTGAA 59.128 40.000 0.00 0.00 41.09 2.69
3656 6095 7.708322 CGGAACTTCTCAGATTCATCTTGAATA 59.292 37.037 2.87 0.00 46.20 1.75
3657 6096 9.558396 GGAACTTCTCAGATTCATCTTGAATAT 57.442 33.333 2.87 0.00 46.20 1.28
3666 6105 9.932699 CAGATTCATCTTGAATATGTGAGAAAC 57.067 33.333 13.88 0.00 46.20 2.78
3667 6106 9.676861 AGATTCATCTTGAATATGTGAGAAACA 57.323 29.630 2.87 0.00 46.20 2.83
3670 6109 8.186163 TTCATCTTGAATATGTGAGAAACATGC 58.814 33.333 0.00 0.00 39.55 4.06
3682 6121 7.041721 TGTGAGAAACATGCTATGTACTTAGG 58.958 38.462 15.45 4.16 44.07 2.69
3683 6122 6.018669 GTGAGAAACATGCTATGTACTTAGGC 60.019 42.308 15.45 9.47 44.07 3.93
3684 6123 5.989477 AGAAACATGCTATGTACTTAGGCA 58.011 37.500 15.45 13.60 44.07 4.75
3685 6124 6.595682 AGAAACATGCTATGTACTTAGGCAT 58.404 36.000 15.45 14.84 44.07 4.40
3688 6127 4.982241 ATGCTATGTACTTAGGCATGGT 57.018 40.909 15.45 0.00 41.26 3.55
3689 6128 4.771114 TGCTATGTACTTAGGCATGGTT 57.229 40.909 15.45 0.00 0.00 3.67
3690 6129 4.450976 TGCTATGTACTTAGGCATGGTTG 58.549 43.478 15.45 0.00 0.00 3.77
3712 6151 3.739077 GCGCCATGCCACTTTTTAT 57.261 47.368 0.00 0.00 37.76 1.40
3713 6152 2.008752 GCGCCATGCCACTTTTTATT 57.991 45.000 0.00 0.00 37.76 1.40
3714 6153 2.345876 GCGCCATGCCACTTTTTATTT 58.654 42.857 0.00 0.00 37.76 1.40
3715 6154 2.741517 GCGCCATGCCACTTTTTATTTT 59.258 40.909 0.00 0.00 37.76 1.82
3716 6155 3.929610 GCGCCATGCCACTTTTTATTTTA 59.070 39.130 0.00 0.00 37.76 1.52
3717 6156 4.201676 GCGCCATGCCACTTTTTATTTTAC 60.202 41.667 0.00 0.00 37.76 2.01
3718 6157 5.167845 CGCCATGCCACTTTTTATTTTACT 58.832 37.500 0.00 0.00 0.00 2.24
3719 6158 5.062058 CGCCATGCCACTTTTTATTTTACTG 59.938 40.000 0.00 0.00 0.00 2.74
3720 6159 6.162777 GCCATGCCACTTTTTATTTTACTGA 58.837 36.000 0.00 0.00 0.00 3.41
3721 6160 6.818142 GCCATGCCACTTTTTATTTTACTGAT 59.182 34.615 0.00 0.00 0.00 2.90
3722 6161 7.010460 GCCATGCCACTTTTTATTTTACTGATC 59.990 37.037 0.00 0.00 0.00 2.92
3723 6162 7.220683 CCATGCCACTTTTTATTTTACTGATCG 59.779 37.037 0.00 0.00 0.00 3.69
3724 6163 6.090129 TGCCACTTTTTATTTTACTGATCGC 58.910 36.000 0.00 0.00 0.00 4.58
3725 6164 5.515270 GCCACTTTTTATTTTACTGATCGCC 59.485 40.000 0.00 0.00 0.00 5.54
3726 6165 6.625081 GCCACTTTTTATTTTACTGATCGCCT 60.625 38.462 0.00 0.00 0.00 5.52
3727 6166 7.414762 GCCACTTTTTATTTTACTGATCGCCTA 60.415 37.037 0.00 0.00 0.00 3.93
3728 6167 8.621286 CCACTTTTTATTTTACTGATCGCCTAT 58.379 33.333 0.00 0.00 0.00 2.57
3729 6168 9.438291 CACTTTTTATTTTACTGATCGCCTATG 57.562 33.333 0.00 0.00 0.00 2.23
3730 6169 9.174166 ACTTTTTATTTTACTGATCGCCTATGT 57.826 29.630 0.00 0.00 0.00 2.29
3731 6170 9.438291 CTTTTTATTTTACTGATCGCCTATGTG 57.562 33.333 0.00 0.00 0.00 3.21
3732 6171 8.500753 TTTTATTTTACTGATCGCCTATGTGT 57.499 30.769 0.00 0.00 0.00 3.72
3733 6172 8.500753 TTTATTTTACTGATCGCCTATGTGTT 57.499 30.769 0.00 0.00 0.00 3.32
3734 6173 8.500753 TTATTTTACTGATCGCCTATGTGTTT 57.499 30.769 0.00 0.00 0.00 2.83
3735 6174 5.794687 TTTACTGATCGCCTATGTGTTTG 57.205 39.130 0.00 0.00 0.00 2.93
3736 6175 3.334583 ACTGATCGCCTATGTGTTTGT 57.665 42.857 0.00 0.00 0.00 2.83
3737 6176 3.674997 ACTGATCGCCTATGTGTTTGTT 58.325 40.909 0.00 0.00 0.00 2.83
3738 6177 4.072131 ACTGATCGCCTATGTGTTTGTTT 58.928 39.130 0.00 0.00 0.00 2.83
3739 6178 4.083324 ACTGATCGCCTATGTGTTTGTTTG 60.083 41.667 0.00 0.00 0.00 2.93
3740 6179 4.068599 TGATCGCCTATGTGTTTGTTTGA 58.931 39.130 0.00 0.00 0.00 2.69
3741 6180 4.699735 TGATCGCCTATGTGTTTGTTTGAT 59.300 37.500 0.00 0.00 0.00 2.57
3742 6181 5.182950 TGATCGCCTATGTGTTTGTTTGATT 59.817 36.000 0.00 0.00 0.00 2.57
3743 6182 5.446143 TCGCCTATGTGTTTGTTTGATTT 57.554 34.783 0.00 0.00 0.00 2.17
3744 6183 5.457140 TCGCCTATGTGTTTGTTTGATTTC 58.543 37.500 0.00 0.00 0.00 2.17
3745 6184 5.240623 TCGCCTATGTGTTTGTTTGATTTCT 59.759 36.000 0.00 0.00 0.00 2.52
3746 6185 6.428465 TCGCCTATGTGTTTGTTTGATTTCTA 59.572 34.615 0.00 0.00 0.00 2.10
3747 6186 6.523201 CGCCTATGTGTTTGTTTGATTTCTAC 59.477 38.462 0.00 0.00 0.00 2.59
3748 6187 6.806739 GCCTATGTGTTTGTTTGATTTCTACC 59.193 38.462 0.00 0.00 0.00 3.18
3749 6188 7.309194 GCCTATGTGTTTGTTTGATTTCTACCT 60.309 37.037 0.00 0.00 0.00 3.08
3750 6189 8.576442 CCTATGTGTTTGTTTGATTTCTACCTT 58.424 33.333 0.00 0.00 0.00 3.50
3751 6190 9.965824 CTATGTGTTTGTTTGATTTCTACCTTT 57.034 29.630 0.00 0.00 0.00 3.11
3753 6192 9.665719 ATGTGTTTGTTTGATTTCTACCTTTTT 57.334 25.926 0.00 0.00 0.00 1.94
3768 6207 8.205131 TCTACCTTTTTATTTTACTGATCGCC 57.795 34.615 0.00 0.00 0.00 5.54
3769 6208 8.044908 TCTACCTTTTTATTTTACTGATCGCCT 58.955 33.333 0.00 0.00 0.00 5.52
3770 6209 9.321562 CTACCTTTTTATTTTACTGATCGCCTA 57.678 33.333 0.00 0.00 0.00 3.93
3771 6210 8.747538 ACCTTTTTATTTTACTGATCGCCTAT 57.252 30.769 0.00 0.00 0.00 2.57
3772 6211 8.621286 ACCTTTTTATTTTACTGATCGCCTATG 58.379 33.333 0.00 0.00 0.00 2.23
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
134 135 9.762933 TCATATTTTCCCTTCAAACTTTTTCAG 57.237 29.630 0.00 0.00 0.00 3.02
434 975 1.066858 CAGTCAACACTATGCCGTCCT 60.067 52.381 0.00 0.00 0.00 3.85
447 988 3.414700 CGGACGCCTGCAGTCAAC 61.415 66.667 13.81 1.40 40.20 3.18
454 995 0.531974 TAATGGAATCGGACGCCTGC 60.532 55.000 0.46 0.00 0.00 4.85
466 1007 6.496565 TGAAGGGAAAAGCATTTCTAATGGAA 59.503 34.615 13.60 0.00 43.65 3.53
610 1151 8.458052 TCGTCTTGAAATTTTGCACACATATAT 58.542 29.630 0.00 0.00 0.00 0.86
752 2990 1.066152 GCTTCATGGAGCCCGATTTTC 59.934 52.381 15.77 0.00 36.66 2.29
790 3028 1.067283 AGACACATCTCAGCACGAAGG 60.067 52.381 0.00 0.00 0.00 3.46
864 3237 1.460504 TCCGTGCTAGACTAGTGGTG 58.539 55.000 11.15 0.00 0.00 4.17
865 3238 1.817447 GTTCCGTGCTAGACTAGTGGT 59.183 52.381 11.15 0.00 0.00 4.16
986 3359 4.209866 CCATGGGGTAGGCTGGGC 62.210 72.222 2.85 0.00 0.00 5.36
1030 3419 1.283347 AGAGGTGTCTGGTGCATGAT 58.717 50.000 0.00 0.00 0.00 2.45
1038 3427 2.447443 TGTAGCTGTAGAGGTGTCTGG 58.553 52.381 1.14 0.00 33.84 3.86
1044 3433 4.589374 AGAAGTGTTTGTAGCTGTAGAGGT 59.411 41.667 0.00 0.00 0.00 3.85
1060 3449 3.017442 TGAGCGATAGTAGCAGAAGTGT 58.983 45.455 0.00 0.00 37.01 3.55
1272 3676 1.728426 GGACGACACGACGAGGTTG 60.728 63.158 0.00 6.00 37.03 3.77
1497 3901 1.669779 GTGATGATGCTGACCTCTTGC 59.330 52.381 0.00 0.00 0.00 4.01
1546 3950 6.308524 CGGTTGTGTGTATACGTTCTTCATTA 59.691 38.462 0.00 0.00 0.00 1.90
1557 3962 2.268298 CAGAGCCGGTTGTGTGTATAC 58.732 52.381 7.33 0.00 0.00 1.47
1562 3967 2.281070 AGCAGAGCCGGTTGTGTG 60.281 61.111 16.75 5.44 0.00 3.82
1676 4081 2.860293 CGGCACACCACATCGTTC 59.140 61.111 0.00 0.00 34.57 3.95
1757 4162 1.080434 GACGAGAGCCGAGTTTGCT 60.080 57.895 0.00 0.00 43.03 3.91
1979 4384 1.134521 TCTTGCCGAACCGATAGCAAT 60.135 47.619 0.00 0.00 43.70 3.56
1993 4398 0.743097 GATGCCATGGAACTCTTGCC 59.257 55.000 18.40 0.00 0.00 4.52
2205 4621 2.356535 GGCCATGAGTTGATCAGGTCTT 60.357 50.000 0.00 0.00 42.53 3.01
2207 4623 1.065199 TGGCCATGAGTTGATCAGGTC 60.065 52.381 0.00 0.00 42.53 3.85
2253 4669 1.546589 ATTGTTGTCCGGCGGGAGTA 61.547 55.000 27.98 2.78 44.97 2.59
2269 4685 3.941483 AGGTTATGCTCCTCGACAAATTG 59.059 43.478 0.00 0.00 0.00 2.32
2361 4777 2.284625 ATCGCCAGGTGTGGGAGA 60.285 61.111 0.00 0.00 45.17 3.71
2431 4847 1.321474 CCAATAGCCCATGCGTTGAT 58.679 50.000 7.10 0.00 44.33 2.57
2465 4881 4.003788 CGTCCGGCTTGTCCCAGT 62.004 66.667 0.00 0.00 0.00 4.00
2493 4909 1.000612 ACCCTCGAGGAACCTCTCC 59.999 63.158 33.39 0.00 45.81 3.71
2605 5021 2.861750 GCATGATCTCGACAGTAGCCAG 60.862 54.545 0.00 0.00 0.00 4.85
2686 5102 4.402056 ACACCTCCGTCATATCGATTTT 57.598 40.909 1.71 0.00 0.00 1.82
2687 5103 4.402056 AACACCTCCGTCATATCGATTT 57.598 40.909 1.71 0.00 0.00 2.17
2688 5104 4.119862 CAAACACCTCCGTCATATCGATT 58.880 43.478 1.71 0.00 0.00 3.34
2847 5265 4.503123 CCACATAATCTACGATTGGCTGGA 60.503 45.833 0.00 0.00 0.00 3.86
2849 5267 4.631131 TCCACATAATCTACGATTGGCTG 58.369 43.478 0.00 0.00 0.00 4.85
2917 5335 4.230657 CAGTCACCGAGTTTCAGTAGAAG 58.769 47.826 0.00 0.00 34.71 2.85
2922 5340 1.410004 TCCAGTCACCGAGTTTCAGT 58.590 50.000 0.00 0.00 0.00 3.41
2961 5391 7.967890 CATCATAGGATGCACACAACTATAA 57.032 36.000 4.16 0.00 44.03 0.98
2988 5418 8.446599 AATTAAAATAGGATTACCACGGTCTG 57.553 34.615 0.00 0.00 38.94 3.51
3018 5448 9.883142 CACCTCCTTAATTAATAAAAATGGCAA 57.117 29.630 0.00 0.00 0.00 4.52
3019 5449 8.482128 CCACCTCCTTAATTAATAAAAATGGCA 58.518 33.333 0.00 0.00 0.00 4.92
3020 5450 7.931407 CCCACCTCCTTAATTAATAAAAATGGC 59.069 37.037 0.00 0.00 0.00 4.40
3021 5451 8.988060 ACCCACCTCCTTAATTAATAAAAATGG 58.012 33.333 0.00 3.56 0.00 3.16
3026 5456 7.631933 TCGAACCCACCTCCTTAATTAATAAA 58.368 34.615 0.00 0.00 0.00 1.40
3032 5462 4.077108 GTTTCGAACCCACCTCCTTAATT 58.923 43.478 0.00 0.00 0.00 1.40
3033 5463 3.073356 TGTTTCGAACCCACCTCCTTAAT 59.927 43.478 0.00 0.00 0.00 1.40
3034 5464 2.438763 TGTTTCGAACCCACCTCCTTAA 59.561 45.455 0.00 0.00 0.00 1.85
3035 5465 2.048601 TGTTTCGAACCCACCTCCTTA 58.951 47.619 0.00 0.00 0.00 2.69
3036 5466 0.841289 TGTTTCGAACCCACCTCCTT 59.159 50.000 0.00 0.00 0.00 3.36
3037 5467 0.841289 TTGTTTCGAACCCACCTCCT 59.159 50.000 0.00 0.00 0.00 3.69
3038 5468 1.235724 CTTGTTTCGAACCCACCTCC 58.764 55.000 0.00 0.00 0.00 4.30
3039 5469 1.202722 TCCTTGTTTCGAACCCACCTC 60.203 52.381 0.00 0.00 0.00 3.85
3040 5470 0.841289 TCCTTGTTTCGAACCCACCT 59.159 50.000 0.00 0.00 0.00 4.00
3041 5471 1.335810 GTTCCTTGTTTCGAACCCACC 59.664 52.381 0.00 0.00 33.71 4.61
3042 5472 2.768833 GTTCCTTGTTTCGAACCCAC 57.231 50.000 0.00 0.00 33.71 4.61
3072 5506 5.486526 AGAGTGATGACCTCTCATTTGAAC 58.513 41.667 0.00 0.00 37.24 3.18
3082 5516 1.067565 TGTTGCGAGAGTGATGACCTC 60.068 52.381 0.00 0.00 0.00 3.85
3100 5534 8.926710 GTGCTAAGCAATCGAGTAATATAATGT 58.073 33.333 0.00 0.00 41.47 2.71
3112 5546 0.248012 TTCGGGTGCTAAGCAATCGA 59.752 50.000 0.00 0.00 41.47 3.59
3113 5547 0.652592 CTTCGGGTGCTAAGCAATCG 59.347 55.000 0.00 0.00 41.47 3.34
3122 5556 2.920076 TTTTGGGTGCTTCGGGTGCT 62.920 55.000 0.00 0.00 0.00 4.40
3132 5566 0.315251 GGAAGTGAGCTTTTGGGTGC 59.685 55.000 0.00 0.00 34.61 5.01
3142 5576 1.903183 ACTACCAAGGAGGAAGTGAGC 59.097 52.381 0.00 0.00 41.22 4.26
3161 5595 1.270839 ACCTATGGTCACTGTGCACAC 60.271 52.381 17.42 5.98 0.00 3.82
3163 5597 2.418746 CCTACCTATGGTCACTGTGCAC 60.419 54.545 10.75 10.75 37.09 4.57
3164 5598 1.831106 CCTACCTATGGTCACTGTGCA 59.169 52.381 2.12 0.00 37.09 4.57
3176 5610 1.831286 CACCGCGACCCCTACCTAT 60.831 63.158 8.23 0.00 0.00 2.57
3178 5612 4.691359 ACACCGCGACCCCTACCT 62.691 66.667 8.23 0.00 0.00 3.08
3180 5614 2.433664 CAACACCGCGACCCCTAC 60.434 66.667 8.23 0.00 0.00 3.18
3181 5615 4.382320 GCAACACCGCGACCCCTA 62.382 66.667 8.23 0.00 0.00 3.53
3190 5624 0.242825 TAGAGTCTTCCGCAACACCG 59.757 55.000 0.00 0.00 0.00 4.94
3192 5626 1.336887 TGCTAGAGTCTTCCGCAACAC 60.337 52.381 0.00 0.00 30.31 3.32
3193 5627 0.966179 TGCTAGAGTCTTCCGCAACA 59.034 50.000 0.00 0.00 30.31 3.33
3194 5628 2.301577 ATGCTAGAGTCTTCCGCAAC 57.698 50.000 13.23 0.00 35.00 4.17
3196 5630 2.758423 TGTAATGCTAGAGTCTTCCGCA 59.242 45.455 12.06 12.06 35.56 5.69
3197 5631 3.117046 GTGTAATGCTAGAGTCTTCCGC 58.883 50.000 0.00 0.00 0.00 5.54
3198 5632 4.498345 GGAGTGTAATGCTAGAGTCTTCCG 60.498 50.000 0.00 0.00 0.00 4.30
3199 5633 4.647399 AGGAGTGTAATGCTAGAGTCTTCC 59.353 45.833 0.00 0.00 0.00 3.46
3200 5634 5.845391 AGGAGTGTAATGCTAGAGTCTTC 57.155 43.478 0.00 0.00 0.00 2.87
3205 5639 5.543507 ATGGAAGGAGTGTAATGCTAGAG 57.456 43.478 0.00 0.00 0.00 2.43
3210 5644 7.771183 TGAAAATTATGGAAGGAGTGTAATGC 58.229 34.615 0.00 0.00 0.00 3.56
3219 5653 4.017591 TGCCTCCTGAAAATTATGGAAGGA 60.018 41.667 0.00 0.00 32.96 3.36
3225 5659 4.724074 TGCTTGCCTCCTGAAAATTATG 57.276 40.909 0.00 0.00 0.00 1.90
3236 5670 0.458669 CCATGTTCATGCTTGCCTCC 59.541 55.000 7.21 0.00 0.00 4.30
3240 5674 2.686405 TGATCTCCATGTTCATGCTTGC 59.314 45.455 7.21 0.00 0.00 4.01
3241 5675 4.860072 CATGATCTCCATGTTCATGCTTG 58.140 43.478 7.21 0.00 45.83 4.01
3258 5697 1.833630 TCACTCGAGGAAAGCCATGAT 59.166 47.619 18.41 0.00 36.29 2.45
3266 5705 4.873746 ATCTTGTTCTCACTCGAGGAAA 57.126 40.909 18.41 2.21 39.95 3.13
3272 5711 1.734465 GCCCAATCTTGTTCTCACTCG 59.266 52.381 0.00 0.00 0.00 4.18
3273 5712 2.783135 TGCCCAATCTTGTTCTCACTC 58.217 47.619 0.00 0.00 0.00 3.51
3292 5731 4.527816 TCAAAGTTTGGAGGATTGGGATTG 59.472 41.667 15.47 0.00 0.00 2.67
3295 5734 3.496331 GTCAAAGTTTGGAGGATTGGGA 58.504 45.455 15.47 0.00 0.00 4.37
3301 5740 4.351874 AGAATCGTCAAAGTTTGGAGGA 57.648 40.909 15.47 12.56 33.11 3.71
3305 5744 8.970691 AAATCATAAGAATCGTCAAAGTTTGG 57.029 30.769 15.47 0.81 0.00 3.28
3314 5753 6.844696 TGCACCTAAATCATAAGAATCGTC 57.155 37.500 0.00 0.00 0.00 4.20
3315 5754 6.767902 ACATGCACCTAAATCATAAGAATCGT 59.232 34.615 0.00 0.00 0.00 3.73
3316 5755 7.073883 CACATGCACCTAAATCATAAGAATCG 58.926 38.462 0.00 0.00 0.00 3.34
3317 5756 6.860023 GCACATGCACCTAAATCATAAGAATC 59.140 38.462 0.00 0.00 41.59 2.52
3318 5757 6.742109 GCACATGCACCTAAATCATAAGAAT 58.258 36.000 0.00 0.00 41.59 2.40
3319 5758 6.135290 GCACATGCACCTAAATCATAAGAA 57.865 37.500 0.00 0.00 41.59 2.52
3320 5759 5.756195 GCACATGCACCTAAATCATAAGA 57.244 39.130 0.00 0.00 41.59 2.10
3342 5781 7.140705 TGAAACTGAAGTGATAGCAAATGTTG 58.859 34.615 0.00 0.00 0.00 3.33
3343 5782 7.275888 TGAAACTGAAGTGATAGCAAATGTT 57.724 32.000 0.00 0.00 0.00 2.71
3344 5783 6.882610 TGAAACTGAAGTGATAGCAAATGT 57.117 33.333 0.00 0.00 0.00 2.71
3345 5784 6.685828 CGATGAAACTGAAGTGATAGCAAATG 59.314 38.462 0.00 0.00 0.00 2.32
3346 5785 6.595326 TCGATGAAACTGAAGTGATAGCAAAT 59.405 34.615 0.00 0.00 0.00 2.32
3347 5786 5.931724 TCGATGAAACTGAAGTGATAGCAAA 59.068 36.000 0.00 0.00 0.00 3.68
3348 5787 5.478407 TCGATGAAACTGAAGTGATAGCAA 58.522 37.500 0.00 0.00 0.00 3.91
3349 5788 5.072040 TCGATGAAACTGAAGTGATAGCA 57.928 39.130 0.00 0.00 0.00 3.49
3350 5789 6.256539 TCAATCGATGAAACTGAAGTGATAGC 59.743 38.462 0.00 0.00 34.30 2.97
3351 5790 7.042858 CCTCAATCGATGAAACTGAAGTGATAG 60.043 40.741 0.00 0.00 37.67 2.08
3352 5791 6.758416 CCTCAATCGATGAAACTGAAGTGATA 59.242 38.462 0.00 0.00 37.67 2.15
3353 5792 5.583854 CCTCAATCGATGAAACTGAAGTGAT 59.416 40.000 0.00 0.00 37.67 3.06
3354 5793 4.931601 CCTCAATCGATGAAACTGAAGTGA 59.068 41.667 0.00 0.00 37.67 3.41
3355 5794 4.931601 TCCTCAATCGATGAAACTGAAGTG 59.068 41.667 0.00 0.00 37.67 3.16
3356 5795 5.152623 TCCTCAATCGATGAAACTGAAGT 57.847 39.130 0.00 0.00 37.67 3.01
3357 5796 7.095313 CCATATCCTCAATCGATGAAACTGAAG 60.095 40.741 0.00 0.00 37.67 3.02
3358 5797 6.707608 CCATATCCTCAATCGATGAAACTGAA 59.292 38.462 0.00 0.00 37.67 3.02
3359 5798 6.226052 CCATATCCTCAATCGATGAAACTGA 58.774 40.000 0.00 0.00 37.67 3.41
3360 5799 5.410746 CCCATATCCTCAATCGATGAAACTG 59.589 44.000 0.00 0.00 37.67 3.16
3361 5800 5.072329 ACCCATATCCTCAATCGATGAAACT 59.928 40.000 0.00 0.00 37.67 2.66
3362 5801 5.308825 ACCCATATCCTCAATCGATGAAAC 58.691 41.667 0.00 0.00 37.67 2.78
3363 5802 5.567037 ACCCATATCCTCAATCGATGAAA 57.433 39.130 0.00 0.00 37.67 2.69
3364 5803 5.567037 AACCCATATCCTCAATCGATGAA 57.433 39.130 0.00 0.00 37.67 2.57
3365 5804 5.567037 AAACCCATATCCTCAATCGATGA 57.433 39.130 0.00 0.00 36.38 2.92
3366 5805 5.764686 TGAAAACCCATATCCTCAATCGATG 59.235 40.000 0.00 0.00 0.00 3.84
3367 5806 5.940617 TGAAAACCCATATCCTCAATCGAT 58.059 37.500 0.00 0.00 0.00 3.59
3368 5807 5.366482 TGAAAACCCATATCCTCAATCGA 57.634 39.130 0.00 0.00 0.00 3.59
3369 5808 6.449635 TTTGAAAACCCATATCCTCAATCG 57.550 37.500 0.00 0.00 0.00 3.34
3370 5809 9.101655 CATTTTTGAAAACCCATATCCTCAATC 57.898 33.333 0.00 0.00 0.00 2.67
3371 5810 8.605065 ACATTTTTGAAAACCCATATCCTCAAT 58.395 29.630 0.00 0.00 0.00 2.57
3372 5811 7.972301 ACATTTTTGAAAACCCATATCCTCAA 58.028 30.769 0.00 0.00 0.00 3.02
3373 5812 7.552050 ACATTTTTGAAAACCCATATCCTCA 57.448 32.000 0.00 0.00 0.00 3.86
3374 5813 8.846943 AAACATTTTTGAAAACCCATATCCTC 57.153 30.769 0.00 0.00 0.00 3.71
3375 5814 8.435982 TGAAACATTTTTGAAAACCCATATCCT 58.564 29.630 0.00 0.00 0.00 3.24
3376 5815 8.614469 TGAAACATTTTTGAAAACCCATATCC 57.386 30.769 0.00 0.00 0.00 2.59
3380 5819 9.625747 AGTATTGAAACATTTTTGAAAACCCAT 57.374 25.926 0.00 0.00 0.00 4.00
3391 5830 9.553064 TGCCAACAAATAGTATTGAAACATTTT 57.447 25.926 0.00 0.00 34.38 1.82
3392 5831 9.206870 CTGCCAACAAATAGTATTGAAACATTT 57.793 29.630 0.00 0.00 34.38 2.32
3393 5832 8.367156 ACTGCCAACAAATAGTATTGAAACATT 58.633 29.630 0.00 0.00 34.38 2.71
3394 5833 7.895759 ACTGCCAACAAATAGTATTGAAACAT 58.104 30.769 0.00 0.00 34.38 2.71
3395 5834 7.283625 ACTGCCAACAAATAGTATTGAAACA 57.716 32.000 0.00 0.00 34.38 2.83
3396 5835 7.484959 GCTACTGCCAACAAATAGTATTGAAAC 59.515 37.037 0.00 0.00 34.38 2.78
3397 5836 7.535139 GCTACTGCCAACAAATAGTATTGAAA 58.465 34.615 0.00 0.00 34.38 2.69
3398 5837 7.083875 GCTACTGCCAACAAATAGTATTGAA 57.916 36.000 0.00 0.00 34.38 2.69
3399 5838 6.677781 GCTACTGCCAACAAATAGTATTGA 57.322 37.500 0.00 0.00 34.38 2.57
3421 5860 4.815269 CCATAATGAGTACAGCTCTAGGC 58.185 47.826 0.00 0.00 44.41 3.93
3422 5861 4.281941 TGCCATAATGAGTACAGCTCTAGG 59.718 45.833 0.00 0.00 44.41 3.02
3423 5862 5.459536 TGCCATAATGAGTACAGCTCTAG 57.540 43.478 0.00 0.00 44.41 2.43
3424 5863 5.869649 TTGCCATAATGAGTACAGCTCTA 57.130 39.130 0.00 0.00 44.41 2.43
3425 5864 4.760530 TTGCCATAATGAGTACAGCTCT 57.239 40.909 0.00 0.00 44.41 4.09
3426 5865 7.012327 TGTTAATTGCCATAATGAGTACAGCTC 59.988 37.037 0.00 0.00 44.36 4.09
3427 5866 6.828273 TGTTAATTGCCATAATGAGTACAGCT 59.172 34.615 0.00 0.00 0.00 4.24
3428 5867 7.026631 TGTTAATTGCCATAATGAGTACAGC 57.973 36.000 0.00 0.00 0.00 4.40
3429 5868 9.454585 CAATGTTAATTGCCATAATGAGTACAG 57.545 33.333 0.00 0.00 36.99 2.74
3430 5869 9.183368 TCAATGTTAATTGCCATAATGAGTACA 57.817 29.630 0.00 0.00 42.55 2.90
3431 5870 9.450807 GTCAATGTTAATTGCCATAATGAGTAC 57.549 33.333 0.00 0.00 42.55 2.73
3432 5871 8.629158 GGTCAATGTTAATTGCCATAATGAGTA 58.371 33.333 0.00 0.00 42.55 2.59
3433 5872 7.123997 TGGTCAATGTTAATTGCCATAATGAGT 59.876 33.333 9.20 0.00 41.22 3.41
3434 5873 7.490840 TGGTCAATGTTAATTGCCATAATGAG 58.509 34.615 9.20 0.00 41.22 2.90
3435 5874 7.415592 TGGTCAATGTTAATTGCCATAATGA 57.584 32.000 9.20 0.00 41.22 2.57
3439 5878 8.532186 AGTTATGGTCAATGTTAATTGCCATA 57.468 30.769 19.43 19.43 46.89 2.74
3441 5880 6.849085 AGTTATGGTCAATGTTAATTGCCA 57.151 33.333 13.29 13.29 45.55 4.92
3442 5881 7.319646 TGAAGTTATGGTCAATGTTAATTGCC 58.680 34.615 0.00 0.00 42.55 4.52
3443 5882 8.755696 TTGAAGTTATGGTCAATGTTAATTGC 57.244 30.769 0.00 0.00 42.55 3.56
3447 5886 9.184523 CCCTATTGAAGTTATGGTCAATGTTAA 57.815 33.333 8.73 0.00 42.86 2.01
3448 5887 8.553153 TCCCTATTGAAGTTATGGTCAATGTTA 58.447 33.333 8.73 0.00 42.86 2.41
3449 5888 7.339466 GTCCCTATTGAAGTTATGGTCAATGTT 59.661 37.037 8.73 0.00 42.86 2.71
3450 5889 6.828785 GTCCCTATTGAAGTTATGGTCAATGT 59.171 38.462 8.73 0.00 42.86 2.71
3451 5890 6.828273 TGTCCCTATTGAAGTTATGGTCAATG 59.172 38.462 8.73 0.91 42.86 2.82
3452 5891 6.969043 TGTCCCTATTGAAGTTATGGTCAAT 58.031 36.000 4.48 4.48 44.58 2.57
3453 5892 6.012858 ACTGTCCCTATTGAAGTTATGGTCAA 60.013 38.462 0.00 0.00 38.09 3.18
3454 5893 5.487488 ACTGTCCCTATTGAAGTTATGGTCA 59.513 40.000 0.00 0.00 0.00 4.02
3455 5894 5.990668 ACTGTCCCTATTGAAGTTATGGTC 58.009 41.667 0.00 0.00 0.00 4.02
3456 5895 7.504926 TTACTGTCCCTATTGAAGTTATGGT 57.495 36.000 0.00 0.00 0.00 3.55
3457 5896 8.801882 TTTTACTGTCCCTATTGAAGTTATGG 57.198 34.615 0.00 0.00 0.00 2.74
3461 5900 8.934023 TTCATTTTACTGTCCCTATTGAAGTT 57.066 30.769 0.00 0.00 0.00 2.66
3462 5901 8.960591 CATTCATTTTACTGTCCCTATTGAAGT 58.039 33.333 0.00 0.00 0.00 3.01
3463 5902 8.408601 CCATTCATTTTACTGTCCCTATTGAAG 58.591 37.037 0.00 0.00 0.00 3.02
3464 5903 8.112822 TCCATTCATTTTACTGTCCCTATTGAA 58.887 33.333 0.00 0.00 0.00 2.69
3465 5904 7.638444 TCCATTCATTTTACTGTCCCTATTGA 58.362 34.615 0.00 0.00 0.00 2.57
3466 5905 7.880160 TCCATTCATTTTACTGTCCCTATTG 57.120 36.000 0.00 0.00 0.00 1.90
3467 5906 8.116026 AGTTCCATTCATTTTACTGTCCCTATT 58.884 33.333 0.00 0.00 0.00 1.73
3468 5907 7.643123 AGTTCCATTCATTTTACTGTCCCTAT 58.357 34.615 0.00 0.00 0.00 2.57
3469 5908 7.027874 AGTTCCATTCATTTTACTGTCCCTA 57.972 36.000 0.00 0.00 0.00 3.53
3470 5909 5.892348 AGTTCCATTCATTTTACTGTCCCT 58.108 37.500 0.00 0.00 0.00 4.20
3471 5910 6.015434 ACAAGTTCCATTCATTTTACTGTCCC 60.015 38.462 0.00 0.00 0.00 4.46
3472 5911 6.981722 ACAAGTTCCATTCATTTTACTGTCC 58.018 36.000 0.00 0.00 0.00 4.02
3473 5912 8.871686 AAACAAGTTCCATTCATTTTACTGTC 57.128 30.769 0.00 0.00 0.00 3.51
3479 5918 9.883142 TTCAGTTAAACAAGTTCCATTCATTTT 57.117 25.926 0.00 0.00 0.00 1.82
3481 5920 9.696917 GATTCAGTTAAACAAGTTCCATTCATT 57.303 29.630 0.00 0.00 0.00 2.57
3482 5921 8.306761 GGATTCAGTTAAACAAGTTCCATTCAT 58.693 33.333 0.00 0.00 0.00 2.57
3483 5922 7.505585 AGGATTCAGTTAAACAAGTTCCATTCA 59.494 33.333 0.00 0.00 0.00 2.57
3484 5923 7.886338 AGGATTCAGTTAAACAAGTTCCATTC 58.114 34.615 0.00 0.00 0.00 2.67
3485 5924 7.839680 AGGATTCAGTTAAACAAGTTCCATT 57.160 32.000 0.00 0.00 0.00 3.16
3486 5925 7.839680 AAGGATTCAGTTAAACAAGTTCCAT 57.160 32.000 0.00 0.00 0.00 3.41
3487 5926 8.754991 TTAAGGATTCAGTTAAACAAGTTCCA 57.245 30.769 0.00 0.00 0.00 3.53
3490 5929 9.981114 CCAATTAAGGATTCAGTTAAACAAGTT 57.019 29.630 0.00 0.00 0.00 2.66
3491 5930 9.143155 ACCAATTAAGGATTCAGTTAAACAAGT 57.857 29.630 0.00 0.00 0.00 3.16
3492 5931 9.981114 AACCAATTAAGGATTCAGTTAAACAAG 57.019 29.630 0.00 0.00 0.00 3.16
3494 5933 9.757227 CAAACCAATTAAGGATTCAGTTAAACA 57.243 29.630 0.00 0.00 0.00 2.83
3495 5934 9.203421 CCAAACCAATTAAGGATTCAGTTAAAC 57.797 33.333 0.00 0.00 0.00 2.01
3496 5935 8.929487 ACCAAACCAATTAAGGATTCAGTTAAA 58.071 29.630 0.00 0.00 0.00 1.52
3497 5936 8.485578 ACCAAACCAATTAAGGATTCAGTTAA 57.514 30.769 0.00 0.00 0.00 2.01
3498 5937 7.726291 TGACCAAACCAATTAAGGATTCAGTTA 59.274 33.333 0.00 0.00 0.00 2.24
3499 5938 6.553100 TGACCAAACCAATTAAGGATTCAGTT 59.447 34.615 0.00 0.00 0.00 3.16
3500 5939 6.074648 TGACCAAACCAATTAAGGATTCAGT 58.925 36.000 0.00 0.00 0.00 3.41
3501 5940 6.588719 TGACCAAACCAATTAAGGATTCAG 57.411 37.500 0.00 0.00 0.00 3.02
3502 5941 6.553100 ACTTGACCAAACCAATTAAGGATTCA 59.447 34.615 0.00 0.00 0.00 2.57
3503 5942 6.993079 ACTTGACCAAACCAATTAAGGATTC 58.007 36.000 0.00 0.00 0.00 2.52
3504 5943 6.553100 TGACTTGACCAAACCAATTAAGGATT 59.447 34.615 0.00 0.00 0.00 3.01
3505 5944 6.074648 TGACTTGACCAAACCAATTAAGGAT 58.925 36.000 0.00 0.00 0.00 3.24
3506 5945 5.450453 TGACTTGACCAAACCAATTAAGGA 58.550 37.500 0.00 0.00 0.00 3.36
3507 5946 5.782893 TGACTTGACCAAACCAATTAAGG 57.217 39.130 0.00 0.00 0.00 2.69
3508 5947 7.038154 TCTTGACTTGACCAAACCAATTAAG 57.962 36.000 0.00 0.00 0.00 1.85
3509 5948 7.595819 ATCTTGACTTGACCAAACCAATTAA 57.404 32.000 0.00 0.00 0.00 1.40
3510 5949 7.595819 AATCTTGACTTGACCAAACCAATTA 57.404 32.000 0.00 0.00 0.00 1.40
3511 5950 6.484364 AATCTTGACTTGACCAAACCAATT 57.516 33.333 0.00 0.00 0.00 2.32
3512 5951 6.484364 AAATCTTGACTTGACCAAACCAAT 57.516 33.333 0.00 0.00 0.00 3.16
3513 5952 5.930837 AAATCTTGACTTGACCAAACCAA 57.069 34.783 0.00 0.00 0.00 3.67
3514 5953 6.361433 TCTAAATCTTGACTTGACCAAACCA 58.639 36.000 0.00 0.00 0.00 3.67
3515 5954 6.877611 TCTAAATCTTGACTTGACCAAACC 57.122 37.500 0.00 0.00 0.00 3.27
3517 5956 9.793259 ACTAATCTAAATCTTGACTTGACCAAA 57.207 29.630 0.00 0.00 0.00 3.28
3518 5957 9.793259 AACTAATCTAAATCTTGACTTGACCAA 57.207 29.630 0.00 0.00 0.00 3.67
3528 5967 8.756864 GCGGAGTTCTAACTAATCTAAATCTTG 58.243 37.037 0.00 0.00 39.88 3.02
3529 5968 8.475639 TGCGGAGTTCTAACTAATCTAAATCTT 58.524 33.333 0.00 0.00 39.88 2.40
3530 5969 7.921745 GTGCGGAGTTCTAACTAATCTAAATCT 59.078 37.037 0.00 0.00 39.88 2.40
3531 5970 7.921745 AGTGCGGAGTTCTAACTAATCTAAATC 59.078 37.037 0.00 0.00 39.88 2.17
3532 5971 7.707035 CAGTGCGGAGTTCTAACTAATCTAAAT 59.293 37.037 0.00 0.00 39.88 1.40
3533 5972 7.033791 CAGTGCGGAGTTCTAACTAATCTAAA 58.966 38.462 0.00 0.00 39.88 1.85
3534 5973 6.561614 CAGTGCGGAGTTCTAACTAATCTAA 58.438 40.000 0.00 0.00 39.88 2.10
3535 5974 5.450137 GCAGTGCGGAGTTCTAACTAATCTA 60.450 44.000 0.00 0.00 39.88 1.98
3536 5975 4.678309 GCAGTGCGGAGTTCTAACTAATCT 60.678 45.833 0.00 0.00 39.88 2.40
3537 5976 3.552294 GCAGTGCGGAGTTCTAACTAATC 59.448 47.826 0.00 0.00 39.88 1.75
3538 5977 3.195825 AGCAGTGCGGAGTTCTAACTAAT 59.804 43.478 10.00 0.00 39.88 1.73
3539 5978 2.561419 AGCAGTGCGGAGTTCTAACTAA 59.439 45.455 10.00 0.00 39.88 2.24
3540 5979 2.163815 GAGCAGTGCGGAGTTCTAACTA 59.836 50.000 10.00 0.00 39.88 2.24
3541 5980 0.969894 AGCAGTGCGGAGTTCTAACT 59.030 50.000 10.00 0.00 43.16 2.24
3542 5981 1.067495 AGAGCAGTGCGGAGTTCTAAC 60.067 52.381 10.00 0.00 0.00 2.34
3543 5982 1.257743 AGAGCAGTGCGGAGTTCTAA 58.742 50.000 10.00 0.00 0.00 2.10
3544 5983 1.257743 AAGAGCAGTGCGGAGTTCTA 58.742 50.000 10.00 0.00 0.00 2.10
3545 5984 1.203523 CTAAGAGCAGTGCGGAGTTCT 59.796 52.381 10.00 3.54 0.00 3.01
3546 5985 1.202582 TCTAAGAGCAGTGCGGAGTTC 59.797 52.381 10.00 0.85 0.00 3.01
3547 5986 1.257743 TCTAAGAGCAGTGCGGAGTT 58.742 50.000 10.00 4.61 0.00 3.01
3548 5987 1.067495 GTTCTAAGAGCAGTGCGGAGT 60.067 52.381 10.00 0.00 0.00 3.85
3549 5988 1.067565 TGTTCTAAGAGCAGTGCGGAG 60.068 52.381 10.00 5.91 0.00 4.63
3550 5989 0.966179 TGTTCTAAGAGCAGTGCGGA 59.034 50.000 10.00 1.81 0.00 5.54
3551 5990 1.795768 TTGTTCTAAGAGCAGTGCGG 58.204 50.000 10.00 0.00 0.00 5.69
3552 5991 5.555256 CGATATTTGTTCTAAGAGCAGTGCG 60.555 44.000 10.00 0.00 0.00 5.34
3553 5992 5.292101 ACGATATTTGTTCTAAGAGCAGTGC 59.708 40.000 7.13 7.13 0.00 4.40
3554 5993 6.754209 AGACGATATTTGTTCTAAGAGCAGTG 59.246 38.462 0.00 0.00 0.00 3.66
3555 5994 6.868622 AGACGATATTTGTTCTAAGAGCAGT 58.131 36.000 0.00 0.00 0.00 4.40
3556 5995 6.419413 GGAGACGATATTTGTTCTAAGAGCAG 59.581 42.308 0.00 0.00 0.00 4.24
3557 5996 6.127451 TGGAGACGATATTTGTTCTAAGAGCA 60.127 38.462 0.00 0.00 0.00 4.26
3558 5997 6.273825 TGGAGACGATATTTGTTCTAAGAGC 58.726 40.000 0.00 0.00 0.00 4.09
3559 5998 7.759886 TGTTGGAGACGATATTTGTTCTAAGAG 59.240 37.037 0.00 0.00 0.00 2.85
3560 5999 7.608153 TGTTGGAGACGATATTTGTTCTAAGA 58.392 34.615 0.00 0.00 0.00 2.10
3561 6000 7.827819 TGTTGGAGACGATATTTGTTCTAAG 57.172 36.000 0.00 0.00 0.00 2.18
3562 6001 7.658167 TGTTGTTGGAGACGATATTTGTTCTAA 59.342 33.333 0.00 0.00 0.00 2.10
3563 6002 7.156000 TGTTGTTGGAGACGATATTTGTTCTA 58.844 34.615 0.00 0.00 0.00 2.10
3564 6003 5.995282 TGTTGTTGGAGACGATATTTGTTCT 59.005 36.000 0.00 0.00 0.00 3.01
3565 6004 6.236017 TGTTGTTGGAGACGATATTTGTTC 57.764 37.500 0.00 0.00 0.00 3.18
3566 6005 6.429692 TGATGTTGTTGGAGACGATATTTGTT 59.570 34.615 0.00 0.00 0.00 2.83
3567 6006 5.937540 TGATGTTGTTGGAGACGATATTTGT 59.062 36.000 0.00 0.00 0.00 2.83
3568 6007 6.128309 TGTGATGTTGTTGGAGACGATATTTG 60.128 38.462 0.00 0.00 0.00 2.32
3569 6008 5.937540 TGTGATGTTGTTGGAGACGATATTT 59.062 36.000 0.00 0.00 0.00 1.40
3570 6009 5.487433 TGTGATGTTGTTGGAGACGATATT 58.513 37.500 0.00 0.00 0.00 1.28
3571 6010 5.084818 TGTGATGTTGTTGGAGACGATAT 57.915 39.130 0.00 0.00 0.00 1.63
3572 6011 4.529109 TGTGATGTTGTTGGAGACGATA 57.471 40.909 0.00 0.00 0.00 2.92
3573 6012 3.401033 TGTGATGTTGTTGGAGACGAT 57.599 42.857 0.00 0.00 0.00 3.73
3574 6013 2.869801 GTTGTGATGTTGTTGGAGACGA 59.130 45.455 0.00 0.00 0.00 4.20
3575 6014 2.611751 TGTTGTGATGTTGTTGGAGACG 59.388 45.455 0.00 0.00 0.00 4.18
3576 6015 4.275689 TGATGTTGTGATGTTGTTGGAGAC 59.724 41.667 0.00 0.00 0.00 3.36
3577 6016 4.459330 TGATGTTGTGATGTTGTTGGAGA 58.541 39.130 0.00 0.00 0.00 3.71
3578 6017 4.834357 TGATGTTGTGATGTTGTTGGAG 57.166 40.909 0.00 0.00 0.00 3.86
3579 6018 6.264067 TGTTATGATGTTGTGATGTTGTTGGA 59.736 34.615 0.00 0.00 0.00 3.53
3580 6019 6.363088 GTGTTATGATGTTGTGATGTTGTTGG 59.637 38.462 0.00 0.00 0.00 3.77
3581 6020 6.086634 CGTGTTATGATGTTGTGATGTTGTTG 59.913 38.462 0.00 0.00 0.00 3.33
3582 6021 6.017523 TCGTGTTATGATGTTGTGATGTTGTT 60.018 34.615 0.00 0.00 0.00 2.83
3583 6022 5.468409 TCGTGTTATGATGTTGTGATGTTGT 59.532 36.000 0.00 0.00 0.00 3.32
3584 6023 5.925907 TCGTGTTATGATGTTGTGATGTTG 58.074 37.500 0.00 0.00 0.00 3.33
3585 6024 6.741992 ATCGTGTTATGATGTTGTGATGTT 57.258 33.333 0.00 0.00 0.00 2.71
3586 6025 9.710900 ATATATCGTGTTATGATGTTGTGATGT 57.289 29.630 0.00 0.00 0.00 3.06
3587 6026 9.962759 CATATATCGTGTTATGATGTTGTGATG 57.037 33.333 0.00 0.00 0.00 3.07
3588 6027 9.927668 TCATATATCGTGTTATGATGTTGTGAT 57.072 29.630 0.00 0.00 31.55 3.06
3589 6028 9.757227 TTCATATATCGTGTTATGATGTTGTGA 57.243 29.630 5.31 0.00 35.39 3.58
3619 6058 5.997746 TCTGAGAAGTTCCGATGATGTTTTT 59.002 36.000 0.00 0.00 0.00 1.94
3620 6059 5.551233 TCTGAGAAGTTCCGATGATGTTTT 58.449 37.500 0.00 0.00 0.00 2.43
3621 6060 5.152623 TCTGAGAAGTTCCGATGATGTTT 57.847 39.130 0.00 0.00 0.00 2.83
3622 6061 4.808414 TCTGAGAAGTTCCGATGATGTT 57.192 40.909 0.00 0.00 0.00 2.71
3623 6062 5.105187 TGAATCTGAGAAGTTCCGATGATGT 60.105 40.000 0.00 0.00 31.10 3.06
3624 6063 5.354767 TGAATCTGAGAAGTTCCGATGATG 58.645 41.667 0.00 0.00 31.10 3.07
3625 6064 5.604758 TGAATCTGAGAAGTTCCGATGAT 57.395 39.130 0.00 0.00 31.10 2.45
3626 6065 5.362143 AGATGAATCTGAGAAGTTCCGATGA 59.638 40.000 0.00 0.00 35.42 2.92
3627 6066 5.599732 AGATGAATCTGAGAAGTTCCGATG 58.400 41.667 0.00 0.00 35.42 3.84
3628 6067 5.867903 AGATGAATCTGAGAAGTTCCGAT 57.132 39.130 0.00 0.00 35.42 4.18
3629 6068 5.185828 TCAAGATGAATCTGAGAAGTTCCGA 59.814 40.000 0.00 0.00 37.19 4.55
3630 6069 5.414360 TCAAGATGAATCTGAGAAGTTCCG 58.586 41.667 0.00 0.00 37.19 4.30
3631 6070 7.862512 ATTCAAGATGAATCTGAGAAGTTCC 57.137 36.000 0.00 0.00 43.03 3.62
3633 6072 9.902684 ACATATTCAAGATGAATCTGAGAAGTT 57.097 29.630 19.19 0.70 43.03 2.66
3634 6073 9.327628 CACATATTCAAGATGAATCTGAGAAGT 57.672 33.333 19.19 1.85 43.03 3.01
3635 6074 9.543783 TCACATATTCAAGATGAATCTGAGAAG 57.456 33.333 19.19 9.87 43.03 2.85
3636 6075 9.543783 CTCACATATTCAAGATGAATCTGAGAA 57.456 33.333 19.19 9.54 43.03 2.87
3637 6076 8.921205 TCTCACATATTCAAGATGAATCTGAGA 58.079 33.333 19.19 19.97 43.03 3.27
3638 6077 9.543783 TTCTCACATATTCAAGATGAATCTGAG 57.456 33.333 19.19 18.69 43.03 3.35
3639 6078 9.895138 TTTCTCACATATTCAAGATGAATCTGA 57.105 29.630 19.19 12.91 43.03 3.27
3640 6079 9.932699 GTTTCTCACATATTCAAGATGAATCTG 57.067 33.333 8.74 11.59 43.03 2.90
3641 6080 9.676861 TGTTTCTCACATATTCAAGATGAATCT 57.323 29.630 8.74 0.00 43.03 2.40
3644 6083 8.186163 GCATGTTTCTCACATATTCAAGATGAA 58.814 33.333 0.00 0.00 45.06 2.57
3645 6084 7.555195 AGCATGTTTCTCACATATTCAAGATGA 59.445 33.333 0.00 0.00 45.06 2.92
3646 6085 7.704271 AGCATGTTTCTCACATATTCAAGATG 58.296 34.615 0.00 0.00 45.06 2.90
3647 6086 7.876936 AGCATGTTTCTCACATATTCAAGAT 57.123 32.000 0.00 0.00 45.06 2.40
3648 6087 8.833493 CATAGCATGTTTCTCACATATTCAAGA 58.167 33.333 0.00 0.00 45.06 3.02
3649 6088 8.618677 ACATAGCATGTTTCTCACATATTCAAG 58.381 33.333 0.00 0.00 45.06 3.02
3650 6089 8.510243 ACATAGCATGTTTCTCACATATTCAA 57.490 30.769 0.00 0.00 45.06 2.69
3651 6090 9.045223 GTACATAGCATGTTTCTCACATATTCA 57.955 33.333 7.02 0.00 45.06 2.57
3652 6091 9.265901 AGTACATAGCATGTTTCTCACATATTC 57.734 33.333 7.02 0.00 45.06 1.75
3653 6092 9.618890 AAGTACATAGCATGTTTCTCACATATT 57.381 29.630 7.02 0.00 45.06 1.28
3655 6094 9.750125 CTAAGTACATAGCATGTTTCTCACATA 57.250 33.333 7.02 0.00 45.06 2.29
3657 6096 7.041721 CCTAAGTACATAGCATGTTTCTCACA 58.958 38.462 7.02 0.00 41.63 3.58
3658 6097 6.018669 GCCTAAGTACATAGCATGTTTCTCAC 60.019 42.308 7.02 0.81 41.63 3.51
3659 6098 6.049149 GCCTAAGTACATAGCATGTTTCTCA 58.951 40.000 7.02 0.00 41.63 3.27
3660 6099 6.049149 TGCCTAAGTACATAGCATGTTTCTC 58.951 40.000 7.02 0.00 41.63 2.87
3661 6100 5.989477 TGCCTAAGTACATAGCATGTTTCT 58.011 37.500 7.02 4.74 41.63 2.52
3662 6101 6.293626 CCATGCCTAAGTACATAGCATGTTTC 60.294 42.308 25.34 2.99 41.63 2.78
3663 6102 5.532406 CCATGCCTAAGTACATAGCATGTTT 59.468 40.000 25.34 2.60 41.63 2.83
3664 6103 5.065914 CCATGCCTAAGTACATAGCATGTT 58.934 41.667 25.34 0.00 41.63 2.71
3665 6104 4.103153 ACCATGCCTAAGTACATAGCATGT 59.897 41.667 25.34 16.70 46.92 3.21
3666 6105 4.645535 ACCATGCCTAAGTACATAGCATG 58.354 43.478 22.81 22.81 37.28 4.06
3667 6106 4.982241 ACCATGCCTAAGTACATAGCAT 57.018 40.909 0.00 3.61 0.00 3.79
3668 6107 4.450976 CAACCATGCCTAAGTACATAGCA 58.549 43.478 0.00 1.33 0.00 3.49
3694 6133 2.008752 AATAAAAAGTGGCATGGCGC 57.991 45.000 24.15 24.15 41.28 6.53
3695 6134 5.062058 CAGTAAAATAAAAAGTGGCATGGCG 59.938 40.000 15.27 0.00 0.00 5.69
3696 6135 6.162777 TCAGTAAAATAAAAAGTGGCATGGC 58.837 36.000 13.29 13.29 0.00 4.40
3697 6136 7.220683 CGATCAGTAAAATAAAAAGTGGCATGG 59.779 37.037 0.00 0.00 0.00 3.66
3698 6137 7.253750 GCGATCAGTAAAATAAAAAGTGGCATG 60.254 37.037 0.00 0.00 0.00 4.06
3699 6138 6.751888 GCGATCAGTAAAATAAAAAGTGGCAT 59.248 34.615 0.00 0.00 0.00 4.40
3700 6139 6.090129 GCGATCAGTAAAATAAAAAGTGGCA 58.910 36.000 0.00 0.00 0.00 4.92
3701 6140 5.515270 GGCGATCAGTAAAATAAAAAGTGGC 59.485 40.000 0.00 0.00 0.00 5.01
3702 6141 6.852664 AGGCGATCAGTAAAATAAAAAGTGG 58.147 36.000 0.00 0.00 0.00 4.00
3703 6142 9.438291 CATAGGCGATCAGTAAAATAAAAAGTG 57.562 33.333 0.00 0.00 0.00 3.16
3704 6143 9.174166 ACATAGGCGATCAGTAAAATAAAAAGT 57.826 29.630 0.00 0.00 0.00 2.66
3705 6144 9.438291 CACATAGGCGATCAGTAAAATAAAAAG 57.562 33.333 0.00 0.00 0.00 2.27
3706 6145 8.952278 ACACATAGGCGATCAGTAAAATAAAAA 58.048 29.630 0.00 0.00 0.00 1.94
3707 6146 8.500753 ACACATAGGCGATCAGTAAAATAAAA 57.499 30.769 0.00 0.00 0.00 1.52
3708 6147 8.500753 AACACATAGGCGATCAGTAAAATAAA 57.499 30.769 0.00 0.00 0.00 1.40
3709 6148 8.394877 CAAACACATAGGCGATCAGTAAAATAA 58.605 33.333 0.00 0.00 0.00 1.40
3710 6149 7.551262 ACAAACACATAGGCGATCAGTAAAATA 59.449 33.333 0.00 0.00 0.00 1.40
3711 6150 6.374333 ACAAACACATAGGCGATCAGTAAAAT 59.626 34.615 0.00 0.00 0.00 1.82
3712 6151 5.703592 ACAAACACATAGGCGATCAGTAAAA 59.296 36.000 0.00 0.00 0.00 1.52
3713 6152 5.242434 ACAAACACATAGGCGATCAGTAAA 58.758 37.500 0.00 0.00 0.00 2.01
3714 6153 4.827692 ACAAACACATAGGCGATCAGTAA 58.172 39.130 0.00 0.00 0.00 2.24
3715 6154 4.465632 ACAAACACATAGGCGATCAGTA 57.534 40.909 0.00 0.00 0.00 2.74
3716 6155 3.334583 ACAAACACATAGGCGATCAGT 57.665 42.857 0.00 0.00 0.00 3.41
3717 6156 4.154015 TCAAACAAACACATAGGCGATCAG 59.846 41.667 0.00 0.00 0.00 2.90
3718 6157 4.068599 TCAAACAAACACATAGGCGATCA 58.931 39.130 0.00 0.00 0.00 2.92
3719 6158 4.678509 TCAAACAAACACATAGGCGATC 57.321 40.909 0.00 0.00 0.00 3.69
3720 6159 5.643379 AATCAAACAAACACATAGGCGAT 57.357 34.783 0.00 0.00 0.00 4.58
3721 6160 5.240623 AGAAATCAAACAAACACATAGGCGA 59.759 36.000 0.00 0.00 0.00 5.54
3722 6161 5.460646 AGAAATCAAACAAACACATAGGCG 58.539 37.500 0.00 0.00 0.00 5.52
3723 6162 6.806739 GGTAGAAATCAAACAAACACATAGGC 59.193 38.462 0.00 0.00 0.00 3.93
3724 6163 8.110860 AGGTAGAAATCAAACAAACACATAGG 57.889 34.615 0.00 0.00 0.00 2.57
3725 6164 9.965824 AAAGGTAGAAATCAAACAAACACATAG 57.034 29.630 0.00 0.00 0.00 2.23
3727 6166 9.665719 AAAAAGGTAGAAATCAAACAAACACAT 57.334 25.926 0.00 0.00 0.00 3.21
3742 6181 8.671028 GGCGATCAGTAAAATAAAAAGGTAGAA 58.329 33.333 0.00 0.00 0.00 2.10
3743 6182 8.044908 AGGCGATCAGTAAAATAAAAAGGTAGA 58.955 33.333 0.00 0.00 0.00 2.59
3744 6183 8.209917 AGGCGATCAGTAAAATAAAAAGGTAG 57.790 34.615 0.00 0.00 0.00 3.18
3745 6184 9.841295 ATAGGCGATCAGTAAAATAAAAAGGTA 57.159 29.630 0.00 0.00 0.00 3.08
3746 6185 8.621286 CATAGGCGATCAGTAAAATAAAAAGGT 58.379 33.333 0.00 0.00 0.00 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.