Multiple sequence alignment - TraesCS1D01G098200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G098200 chr1D 100.000 3092 0 0 1 3092 84890686 84893777 0.000000e+00 5710.0
1 TraesCS1D01G098200 chr1D 90.585 2018 131 22 696 2667 84615891 84613887 0.000000e+00 2619.0
2 TraesCS1D01G098200 chr1D 90.694 1440 84 17 783 2187 84728767 84727343 0.000000e+00 1871.0
3 TraesCS1D01G098200 chr1D 87.595 661 70 10 13 669 181631169 181630517 0.000000e+00 756.0
4 TraesCS1D01G098200 chr1D 87.015 670 80 6 1 669 426614000 426613337 0.000000e+00 749.0
5 TraesCS1D01G098200 chr1D 82.035 462 45 24 2236 2667 84726891 84726438 2.930000e-95 359.0
6 TraesCS1D01G098200 chr1D 89.873 79 8 0 2158 2236 84614441 84614363 5.450000e-18 102.0
7 TraesCS1D01G098200 chr1D 100.000 30 0 0 736 765 84728797 84728768 4.310000e-04 56.5
8 TraesCS1D01G098200 chr1B 93.304 1568 76 10 696 2236 137613182 137614747 0.000000e+00 2287.0
9 TraesCS1D01G098200 chr1B 88.738 1847 125 31 897 2667 137182302 137180463 0.000000e+00 2182.0
10 TraesCS1D01G098200 chr1B 93.224 1284 66 5 824 2086 137450880 137449597 0.000000e+00 1869.0
11 TraesCS1D01G098200 chr1B 87.595 661 73 8 13 669 161983746 161983091 0.000000e+00 758.0
12 TraesCS1D01G098200 chr1B 94.386 285 16 0 2127 2411 137614669 137614953 3.660000e-119 438.0
13 TraesCS1D01G098200 chr1B 73.529 204 48 6 2702 2902 94048612 94048812 4.280000e-09 73.1
14 TraesCS1D01G098200 chr1A 88.156 1697 109 36 696 2341 78551490 78549835 0.000000e+00 1936.0
15 TraesCS1D01G098200 chr1A 90.209 1246 86 14 696 1935 79110234 79111449 0.000000e+00 1592.0
16 TraesCS1D01G098200 chr1A 91.082 684 44 10 1505 2187 78958402 78957735 0.000000e+00 909.0
17 TraesCS1D01G098200 chr1A 91.909 618 40 6 1940 2550 79116295 79116909 0.000000e+00 856.0
18 TraesCS1D01G098200 chr1A 81.290 465 47 23 2236 2667 78957285 78956828 1.060000e-89 340.0
19 TraesCS1D01G098200 chr1A 77.178 241 25 19 2452 2667 78340041 78339806 2.520000e-21 113.0
20 TraesCS1D01G098200 chr1A 100.000 38 0 0 2647 2684 79117005 79117042 1.540000e-08 71.3
21 TraesCS1D01G098200 chr2A 86.220 762 88 9 938 1698 611763836 611764581 0.000000e+00 809.0
22 TraesCS1D01G098200 chr2A 88.906 658 68 3 10 666 714526300 714526953 0.000000e+00 806.0
23 TraesCS1D01G098200 chr2D 89.144 654 62 7 15 666 576579193 576579839 0.000000e+00 806.0
24 TraesCS1D01G098200 chr2D 85.676 754 95 10 1412 2160 470200971 470201716 0.000000e+00 782.0
25 TraesCS1D01G098200 chr2D 87.920 654 70 6 13 665 547777168 547776523 0.000000e+00 761.0
26 TraesCS1D01G098200 chr2D 85.818 550 66 7 926 1474 470200444 470200982 9.620000e-160 573.0
27 TraesCS1D01G098200 chr3D 89.130 644 63 6 10 650 180401255 180401894 0.000000e+00 795.0
28 TraesCS1D01G098200 chr3D 87.538 658 77 3 13 669 19930403 19929750 0.000000e+00 756.0
29 TraesCS1D01G098200 chr3D 86.976 668 78 7 1 666 610421222 610421882 0.000000e+00 743.0
30 TraesCS1D01G098200 chr3B 84.910 391 56 3 2685 3073 693973580 693973969 2.890000e-105 392.0
31 TraesCS1D01G098200 chr7D 82.065 368 62 4 2685 3051 267780789 267780425 8.330000e-81 311.0
32 TraesCS1D01G098200 chr2B 83.871 62 10 0 2834 2895 62537383 62537444 3.330000e-05 60.2
33 TraesCS1D01G098200 chr2B 83.871 62 10 0 2834 2895 141291548 141291609 3.330000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G098200 chr1D 84890686 84893777 3091 False 5710.000000 5710 100.000000 1 3092 1 chr1D.!!$F1 3091
1 TraesCS1D01G098200 chr1D 84613887 84615891 2004 True 1360.500000 2619 90.229000 696 2667 2 chr1D.!!$R3 1971
2 TraesCS1D01G098200 chr1D 84726438 84728797 2359 True 762.166667 1871 90.909667 736 2667 3 chr1D.!!$R4 1931
3 TraesCS1D01G098200 chr1D 181630517 181631169 652 True 756.000000 756 87.595000 13 669 1 chr1D.!!$R1 656
4 TraesCS1D01G098200 chr1D 426613337 426614000 663 True 749.000000 749 87.015000 1 669 1 chr1D.!!$R2 668
5 TraesCS1D01G098200 chr1B 137180463 137182302 1839 True 2182.000000 2182 88.738000 897 2667 1 chr1B.!!$R1 1770
6 TraesCS1D01G098200 chr1B 137449597 137450880 1283 True 1869.000000 1869 93.224000 824 2086 1 chr1B.!!$R2 1262
7 TraesCS1D01G098200 chr1B 137613182 137614953 1771 False 1362.500000 2287 93.845000 696 2411 2 chr1B.!!$F2 1715
8 TraesCS1D01G098200 chr1B 161983091 161983746 655 True 758.000000 758 87.595000 13 669 1 chr1B.!!$R3 656
9 TraesCS1D01G098200 chr1A 78549835 78551490 1655 True 1936.000000 1936 88.156000 696 2341 1 chr1A.!!$R2 1645
10 TraesCS1D01G098200 chr1A 79110234 79111449 1215 False 1592.000000 1592 90.209000 696 1935 1 chr1A.!!$F1 1239
11 TraesCS1D01G098200 chr1A 78956828 78958402 1574 True 624.500000 909 86.186000 1505 2667 2 chr1A.!!$R3 1162
12 TraesCS1D01G098200 chr1A 79116295 79117042 747 False 463.650000 856 95.954500 1940 2684 2 chr1A.!!$F2 744
13 TraesCS1D01G098200 chr2A 611763836 611764581 745 False 809.000000 809 86.220000 938 1698 1 chr2A.!!$F1 760
14 TraesCS1D01G098200 chr2A 714526300 714526953 653 False 806.000000 806 88.906000 10 666 1 chr2A.!!$F2 656
15 TraesCS1D01G098200 chr2D 576579193 576579839 646 False 806.000000 806 89.144000 15 666 1 chr2D.!!$F1 651
16 TraesCS1D01G098200 chr2D 547776523 547777168 645 True 761.000000 761 87.920000 13 665 1 chr2D.!!$R1 652
17 TraesCS1D01G098200 chr2D 470200444 470201716 1272 False 677.500000 782 85.747000 926 2160 2 chr2D.!!$F2 1234
18 TraesCS1D01G098200 chr3D 180401255 180401894 639 False 795.000000 795 89.130000 10 650 1 chr3D.!!$F1 640
19 TraesCS1D01G098200 chr3D 19929750 19930403 653 True 756.000000 756 87.538000 13 669 1 chr3D.!!$R1 656
20 TraesCS1D01G098200 chr3D 610421222 610421882 660 False 743.000000 743 86.976000 1 666 1 chr3D.!!$F2 665

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
368 372 0.532573 TCATGTCCTCGCTGAAGGTC 59.467 55.0 0.0 0.0 37.69 3.85 F
670 681 0.921896 ATAGCCCTGATGCAGTGGTT 59.078 50.0 0.0 0.0 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1443 1536 0.109723 CACACTTCTTCCCCCGGAAA 59.890 55.000 0.73 0.0 41.54 3.13 R
2372 3083 1.064803 TGCTGTGCCTTGTTTTACACG 59.935 47.619 0.00 0.0 35.79 4.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
158 161 0.601057 TGTTGCTGTCGATCGAAGGA 59.399 50.000 21.31 16.88 0.00 3.36
165 168 2.278857 CGATCGAAGGAGGTGCGG 60.279 66.667 10.26 0.00 0.00 5.69
299 302 1.726791 CAGCGACGAGTTTATGCACTT 59.273 47.619 0.00 0.00 0.00 3.16
302 305 2.247637 CGACGAGTTTATGCACTTCGA 58.752 47.619 12.19 0.00 31.40 3.71
336 339 7.436673 ACAAGATTTCTTATCAGACTATGTCGC 59.563 37.037 0.00 0.00 34.57 5.19
344 347 4.429212 ACTATGTCGCCGCGTGCA 62.429 61.111 13.39 13.28 41.33 4.57
358 362 0.723414 CGTGCATGTGTCATGTCCTC 59.277 55.000 10.68 0.00 0.00 3.71
368 372 0.532573 TCATGTCCTCGCTGAAGGTC 59.467 55.000 0.00 0.00 37.69 3.85
561 568 4.692625 GGAGTTACTATCGCGAGGTATACA 59.307 45.833 16.66 3.14 0.00 2.29
565 572 1.132643 CTATCGCGAGGTATACAGCCC 59.867 57.143 16.66 0.00 0.00 5.19
568 575 1.816863 CGCGAGGTATACAGCCCCAT 61.817 60.000 0.00 0.00 0.00 4.00
574 581 3.393278 GAGGTATACAGCCCCATGGTTTA 59.607 47.826 11.73 0.00 0.00 2.01
594 601 6.976349 GGTTTATTTTCCGCTTTATTTCCGAT 59.024 34.615 0.00 0.00 0.00 4.18
597 604 5.890424 TTTTCCGCTTTATTTCCGATTCT 57.110 34.783 0.00 0.00 0.00 2.40
602 609 4.154195 CCGCTTTATTTCCGATTCTATGGG 59.846 45.833 0.00 0.00 0.00 4.00
624 632 0.966875 TCGGCTGCTGGATTTTGCAT 60.967 50.000 8.89 0.00 38.59 3.96
666 677 3.903714 TGTATGTATAGCCCTGATGCAGT 59.096 43.478 0.00 0.00 0.00 4.40
669 680 1.417890 GTATAGCCCTGATGCAGTGGT 59.582 52.381 0.00 0.00 0.00 4.16
670 681 0.921896 ATAGCCCTGATGCAGTGGTT 59.078 50.000 0.00 0.00 0.00 3.67
671 682 1.578897 TAGCCCTGATGCAGTGGTTA 58.421 50.000 0.00 0.00 0.00 2.85
672 683 0.921896 AGCCCTGATGCAGTGGTTAT 59.078 50.000 0.00 0.00 0.00 1.89
673 684 1.027357 GCCCTGATGCAGTGGTTATG 58.973 55.000 0.00 0.00 0.00 1.90
674 685 1.027357 CCCTGATGCAGTGGTTATGC 58.973 55.000 0.00 0.00 44.11 3.14
675 686 1.409241 CCCTGATGCAGTGGTTATGCT 60.409 52.381 0.00 0.00 44.17 3.79
676 687 2.372264 CCTGATGCAGTGGTTATGCTT 58.628 47.619 0.00 0.00 44.17 3.91
677 688 2.756760 CCTGATGCAGTGGTTATGCTTT 59.243 45.455 0.00 0.00 44.17 3.51
678 689 3.194116 CCTGATGCAGTGGTTATGCTTTT 59.806 43.478 0.00 0.00 44.17 2.27
679 690 4.322198 CCTGATGCAGTGGTTATGCTTTTT 60.322 41.667 0.00 0.00 44.17 1.94
726 742 3.068560 CCGTTCCACCGTCTATGAAAAA 58.931 45.455 0.00 0.00 0.00 1.94
773 790 8.574251 AATGTTGGTGTATTATGCAAAGTAGA 57.426 30.769 0.00 0.00 0.00 2.59
774 791 7.372451 TGTTGGTGTATTATGCAAAGTAGAC 57.628 36.000 0.00 0.00 0.00 2.59
812 838 7.389330 TCAGTAAATAAGATGCTTTGTCGGAAA 59.611 33.333 0.00 0.00 0.00 3.13
856 882 1.803334 TCCAAAACGGAGTCGATTGG 58.197 50.000 15.89 15.89 45.00 3.16
1380 1473 3.832171 CTGCGCGACGTGAAGCTC 61.832 66.667 12.10 0.00 0.00 4.09
1392 1485 1.153549 GAAGCTCCAAGGCGACGAT 60.154 57.895 0.00 0.00 37.29 3.73
1442 1535 3.827898 CGTGGAGTCCGAGGAGGC 61.828 72.222 4.30 0.00 40.77 4.70
1443 1536 2.363147 GTGGAGTCCGAGGAGGCT 60.363 66.667 4.30 0.00 40.77 4.58
1444 1537 1.985116 GTGGAGTCCGAGGAGGCTT 60.985 63.158 4.30 0.00 40.77 4.35
1459 1603 1.379146 GCTTTCCGGGGGAAGAAGT 59.621 57.895 10.02 0.00 43.06 3.01
1529 1673 3.744719 CGTCGAGCGGGTCCTCAA 61.745 66.667 0.98 0.00 36.85 3.02
1902 2046 2.286365 TTTTCGGCAAATGGGAGAGT 57.714 45.000 0.00 0.00 0.00 3.24
2105 2249 8.155821 TGTCATAGTTGATACTAGTCTGCTAC 57.844 38.462 0.00 0.00 40.09 3.58
2106 2250 7.773690 TGTCATAGTTGATACTAGTCTGCTACA 59.226 37.037 0.00 0.00 40.09 2.74
2107 2251 8.622157 GTCATAGTTGATACTAGTCTGCTACAA 58.378 37.037 0.00 0.00 40.09 2.41
2109 2253 5.897050 AGTTGATACTAGTCTGCTACAAGC 58.103 41.667 0.00 0.00 35.61 4.01
2110 2254 4.920640 TGATACTAGTCTGCTACAAGCC 57.079 45.455 0.00 0.00 41.51 4.35
2111 2255 4.537751 TGATACTAGTCTGCTACAAGCCT 58.462 43.478 0.00 0.00 41.51 4.58
2112 2256 5.691896 TGATACTAGTCTGCTACAAGCCTA 58.308 41.667 0.00 0.00 41.51 3.93
2147 2355 7.038587 TGTGAGGTTGTAGTCACTTATGGTTAT 60.039 37.037 4.27 0.00 43.03 1.89
2163 2371 9.734620 CTTATGGTTATCAATGTAATGGTTGTG 57.265 33.333 0.00 0.00 0.00 3.33
2355 3061 9.768662 AGTTTTCATGAATTTTTGCAGTTCTAT 57.231 25.926 9.40 0.00 0.00 1.98
2372 3083 7.624344 GCAGTTCTATGTGTAGATTTTGTGACC 60.624 40.741 0.00 0.00 36.84 4.02
2420 3131 3.066621 TCAGCTTTCGACATTGCTTTGTT 59.933 39.130 0.00 0.00 33.03 2.83
2428 3139 4.756642 TCGACATTGCTTTGTTGAGATCTT 59.243 37.500 0.00 0.00 35.54 2.40
2448 3159 4.873827 TCTTTGCTTGAACGTACAAGAAGT 59.126 37.500 11.75 0.00 46.85 3.01
2538 3258 1.731720 AAAGCTGTTGAGGAGATCGC 58.268 50.000 0.00 0.00 0.00 4.58
2551 3271 4.319177 AGGAGATCGCTATGTTTTATGCC 58.681 43.478 0.00 0.00 0.00 4.40
2553 3273 3.412386 AGATCGCTATGTTTTATGCCCC 58.588 45.455 0.00 0.00 0.00 5.80
2554 3274 1.975660 TCGCTATGTTTTATGCCCCC 58.024 50.000 0.00 0.00 0.00 5.40
2615 3354 3.184986 GCATGTTGCCTTTGTCAATTGAC 59.815 43.478 28.10 28.10 40.45 3.18
2625 3364 5.413309 TTTGTCAATTGACCAAACCAAGT 57.587 34.783 30.66 0.00 44.15 3.16
2634 3373 9.487790 CAATTGACCAAACCAAGTATTTTGTAT 57.512 29.630 0.00 0.00 31.86 2.29
2639 3378 9.968870 GACCAAACCAAGTATTTTGTATAACAA 57.031 29.630 0.00 0.00 36.11 2.83
2684 3423 0.608640 AAGATTCGAGGCCGTCAAGT 59.391 50.000 0.00 0.00 37.05 3.16
2685 3424 0.173708 AGATTCGAGGCCGTCAAGTC 59.826 55.000 0.00 0.00 37.05 3.01
2686 3425 0.108804 GATTCGAGGCCGTCAAGTCA 60.109 55.000 0.00 0.00 37.05 3.41
2687 3426 0.389948 ATTCGAGGCCGTCAAGTCAC 60.390 55.000 0.00 0.00 37.05 3.67
2688 3427 1.740332 TTCGAGGCCGTCAAGTCACA 61.740 55.000 0.00 0.00 37.05 3.58
2689 3428 1.300620 CGAGGCCGTCAAGTCACAA 60.301 57.895 0.00 0.00 0.00 3.33
2690 3429 1.284982 CGAGGCCGTCAAGTCACAAG 61.285 60.000 0.00 0.00 0.00 3.16
2691 3430 0.249911 GAGGCCGTCAAGTCACAAGT 60.250 55.000 0.00 0.00 0.00 3.16
2692 3431 0.249911 AGGCCGTCAAGTCACAAGTC 60.250 55.000 0.00 0.00 0.00 3.01
2693 3432 0.531974 GGCCGTCAAGTCACAAGTCA 60.532 55.000 0.00 0.00 0.00 3.41
2694 3433 1.295792 GCCGTCAAGTCACAAGTCAA 58.704 50.000 0.00 0.00 0.00 3.18
2695 3434 1.873591 GCCGTCAAGTCACAAGTCAAT 59.126 47.619 0.00 0.00 0.00 2.57
2696 3435 2.349817 GCCGTCAAGTCACAAGTCAATG 60.350 50.000 0.00 0.00 0.00 2.82
2697 3436 2.224079 CCGTCAAGTCACAAGTCAATGG 59.776 50.000 0.00 0.00 0.00 3.16
2698 3437 2.224079 CGTCAAGTCACAAGTCAATGGG 59.776 50.000 0.00 0.00 0.00 4.00
2699 3438 2.554032 GTCAAGTCACAAGTCAATGGGG 59.446 50.000 0.00 0.00 0.00 4.96
2700 3439 2.441375 TCAAGTCACAAGTCAATGGGGA 59.559 45.455 0.00 0.00 0.00 4.81
2701 3440 3.074390 TCAAGTCACAAGTCAATGGGGAT 59.926 43.478 0.00 0.00 0.00 3.85
2702 3441 3.814504 AGTCACAAGTCAATGGGGATT 57.185 42.857 0.00 0.00 0.00 3.01
2703 3442 4.118168 AGTCACAAGTCAATGGGGATTT 57.882 40.909 0.00 0.00 0.00 2.17
2704 3443 4.082125 AGTCACAAGTCAATGGGGATTTC 58.918 43.478 0.00 0.00 0.00 2.17
2705 3444 3.081061 TCACAAGTCAATGGGGATTTCG 58.919 45.455 0.00 0.00 0.00 3.46
2706 3445 3.081061 CACAAGTCAATGGGGATTTCGA 58.919 45.455 0.00 0.00 0.00 3.71
2707 3446 3.696051 CACAAGTCAATGGGGATTTCGAT 59.304 43.478 0.00 0.00 0.00 3.59
2708 3447 3.696051 ACAAGTCAATGGGGATTTCGATG 59.304 43.478 0.00 0.00 0.00 3.84
2709 3448 2.301346 AGTCAATGGGGATTTCGATGC 58.699 47.619 0.00 0.00 0.00 3.91
2710 3449 1.338020 GTCAATGGGGATTTCGATGCC 59.662 52.381 0.00 0.00 0.00 4.40
2711 3450 1.064091 TCAATGGGGATTTCGATGCCA 60.064 47.619 0.00 0.00 33.23 4.92
2712 3451 1.755959 CAATGGGGATTTCGATGCCAA 59.244 47.619 0.00 0.00 33.23 4.52
2713 3452 2.157640 ATGGGGATTTCGATGCCAAA 57.842 45.000 0.00 0.00 33.23 3.28
2714 3453 2.157640 TGGGGATTTCGATGCCAAAT 57.842 45.000 0.00 0.00 33.23 2.32
2715 3454 3.304911 TGGGGATTTCGATGCCAAATA 57.695 42.857 0.00 0.00 33.23 1.40
2716 3455 3.843422 TGGGGATTTCGATGCCAAATAT 58.157 40.909 0.00 0.00 33.23 1.28
2717 3456 3.826157 TGGGGATTTCGATGCCAAATATC 59.174 43.478 0.00 0.00 33.23 1.63
2718 3457 3.193479 GGGGATTTCGATGCCAAATATCC 59.807 47.826 0.00 0.00 33.23 2.59
2719 3458 3.826157 GGGATTTCGATGCCAAATATCCA 59.174 43.478 0.00 0.00 33.39 3.41
2720 3459 4.280677 GGGATTTCGATGCCAAATATCCAA 59.719 41.667 0.00 0.00 33.39 3.53
2721 3460 5.221422 GGGATTTCGATGCCAAATATCCAAA 60.221 40.000 0.00 0.00 33.39 3.28
2722 3461 6.279882 GGATTTCGATGCCAAATATCCAAAA 58.720 36.000 0.00 0.00 32.31 2.44
2723 3462 6.760770 GGATTTCGATGCCAAATATCCAAAAA 59.239 34.615 0.00 0.00 32.31 1.94
2724 3463 7.442062 GGATTTCGATGCCAAATATCCAAAAAT 59.558 33.333 0.00 0.00 32.31 1.82
2725 3464 7.536895 TTTCGATGCCAAATATCCAAAAATG 57.463 32.000 0.00 0.00 0.00 2.32
2726 3465 6.462552 TCGATGCCAAATATCCAAAAATGA 57.537 33.333 0.00 0.00 0.00 2.57
2727 3466 6.272318 TCGATGCCAAATATCCAAAAATGAC 58.728 36.000 0.00 0.00 0.00 3.06
2728 3467 5.463061 CGATGCCAAATATCCAAAAATGACC 59.537 40.000 0.00 0.00 0.00 4.02
2729 3468 4.753233 TGCCAAATATCCAAAAATGACCG 58.247 39.130 0.00 0.00 0.00 4.79
2730 3469 3.555547 GCCAAATATCCAAAAATGACCGC 59.444 43.478 0.00 0.00 0.00 5.68
2731 3470 4.753233 CCAAATATCCAAAAATGACCGCA 58.247 39.130 0.00 0.00 0.00 5.69
2732 3471 5.358922 CCAAATATCCAAAAATGACCGCAT 58.641 37.500 0.00 0.00 35.92 4.73
2733 3472 6.511416 CCAAATATCCAAAAATGACCGCATA 58.489 36.000 0.00 0.00 33.44 3.14
2734 3473 7.153985 CCAAATATCCAAAAATGACCGCATAT 58.846 34.615 0.00 0.00 33.44 1.78
2735 3474 7.329226 CCAAATATCCAAAAATGACCGCATATC 59.671 37.037 0.00 0.00 33.44 1.63
2736 3475 7.523293 AATATCCAAAAATGACCGCATATCA 57.477 32.000 0.00 0.00 33.44 2.15
2737 3476 5.850557 ATCCAAAAATGACCGCATATCAA 57.149 34.783 0.00 0.00 33.44 2.57
2738 3477 5.651387 TCCAAAAATGACCGCATATCAAA 57.349 34.783 0.00 0.00 33.44 2.69
2739 3478 6.030548 TCCAAAAATGACCGCATATCAAAA 57.969 33.333 0.00 0.00 33.44 2.44
2740 3479 5.866633 TCCAAAAATGACCGCATATCAAAAC 59.133 36.000 0.00 0.00 33.44 2.43
2741 3480 5.220191 CCAAAAATGACCGCATATCAAAACG 60.220 40.000 0.00 0.00 33.44 3.60
2742 3481 2.755836 ATGACCGCATATCAAAACGC 57.244 45.000 0.00 0.00 31.57 4.84
2743 3482 1.732941 TGACCGCATATCAAAACGCT 58.267 45.000 0.00 0.00 0.00 5.07
2744 3483 1.396648 TGACCGCATATCAAAACGCTG 59.603 47.619 0.00 0.00 0.00 5.18
2745 3484 1.396996 GACCGCATATCAAAACGCTGT 59.603 47.619 0.00 0.00 0.00 4.40
2746 3485 1.810151 ACCGCATATCAAAACGCTGTT 59.190 42.857 0.00 0.00 0.00 3.16
2747 3486 2.227865 ACCGCATATCAAAACGCTGTTT 59.772 40.909 1.61 1.61 0.00 2.83
2748 3487 3.241701 CCGCATATCAAAACGCTGTTTT 58.758 40.909 11.79 11.79 0.00 2.43
2749 3488 3.059306 CCGCATATCAAAACGCTGTTTTG 59.941 43.478 26.63 26.63 39.90 2.44
2750 3489 3.059306 CGCATATCAAAACGCTGTTTTGG 59.941 43.478 29.20 20.57 39.25 3.28
2751 3490 3.181531 GCATATCAAAACGCTGTTTTGGC 60.182 43.478 29.20 23.89 39.25 4.52
2752 3491 2.888834 ATCAAAACGCTGTTTTGGCT 57.111 40.000 29.20 20.65 39.25 4.75
2753 3492 5.398169 CATATCAAAACGCTGTTTTGGCTA 58.602 37.500 29.20 23.74 39.25 3.93
2754 3493 4.519540 ATCAAAACGCTGTTTTGGCTAT 57.480 36.364 29.20 20.03 39.25 2.97
2755 3494 3.896122 TCAAAACGCTGTTTTGGCTATC 58.104 40.909 29.20 0.00 39.25 2.08
2756 3495 3.568007 TCAAAACGCTGTTTTGGCTATCT 59.432 39.130 29.20 6.18 39.25 1.98
2757 3496 4.037446 TCAAAACGCTGTTTTGGCTATCTT 59.963 37.500 29.20 5.67 39.25 2.40
2758 3497 3.559238 AACGCTGTTTTGGCTATCTTG 57.441 42.857 0.00 0.00 0.00 3.02
2759 3498 1.812571 ACGCTGTTTTGGCTATCTTGG 59.187 47.619 0.00 0.00 0.00 3.61
2760 3499 1.468054 CGCTGTTTTGGCTATCTTGGC 60.468 52.381 0.00 0.00 0.00 4.52
2768 3507 2.071778 GGCTATCTTGGCCCATTTGA 57.928 50.000 0.00 0.00 43.49 2.69
2769 3508 1.959282 GGCTATCTTGGCCCATTTGAG 59.041 52.381 0.00 0.00 43.49 3.02
2770 3509 1.959282 GCTATCTTGGCCCATTTGAGG 59.041 52.381 0.00 0.00 0.00 3.86
2777 3516 3.099171 CCCATTTGAGGGCCTGGA 58.901 61.111 12.95 0.00 43.10 3.86
2778 3517 1.387737 CCCATTTGAGGGCCTGGAA 59.612 57.895 12.95 5.57 43.10 3.53
2779 3518 0.031817 CCCATTTGAGGGCCTGGAAT 60.032 55.000 12.95 8.07 43.10 3.01
2780 3519 1.623279 CCCATTTGAGGGCCTGGAATT 60.623 52.381 12.95 0.00 43.10 2.17
2781 3520 1.758862 CCATTTGAGGGCCTGGAATTC 59.241 52.381 12.95 0.00 0.00 2.17
2782 3521 1.758862 CATTTGAGGGCCTGGAATTCC 59.241 52.381 12.95 18.17 0.00 3.01
2783 3522 0.783206 TTTGAGGGCCTGGAATTCCA 59.217 50.000 25.53 25.53 45.30 3.53
2784 3523 0.039618 TTGAGGGCCTGGAATTCCAC 59.960 55.000 23.63 14.38 42.01 4.02
2785 3524 1.076705 GAGGGCCTGGAATTCCACC 60.077 63.158 23.63 22.11 42.01 4.61
2786 3525 1.856873 AGGGCCTGGAATTCCACCA 60.857 57.895 27.07 9.74 42.01 4.17
2787 3526 1.682344 GGGCCTGGAATTCCACCAC 60.682 63.158 27.07 17.86 42.01 4.16
2788 3527 2.046285 GGCCTGGAATTCCACCACG 61.046 63.158 23.63 13.33 42.01 4.94
2789 3528 1.303317 GCCTGGAATTCCACCACGT 60.303 57.895 23.63 0.00 42.01 4.49
2790 3529 1.586154 GCCTGGAATTCCACCACGTG 61.586 60.000 23.63 12.23 42.01 4.49
2791 3530 1.586154 CCTGGAATTCCACCACGTGC 61.586 60.000 23.63 0.00 42.01 5.34
2792 3531 1.586154 CTGGAATTCCACCACGTGCC 61.586 60.000 23.63 3.67 42.01 5.01
2793 3532 1.602323 GGAATTCCACCACGTGCCA 60.602 57.895 20.04 0.00 35.64 4.92
2794 3533 1.579429 GAATTCCACCACGTGCCAC 59.421 57.895 10.91 0.00 31.34 5.01
2796 3535 2.668185 AATTCCACCACGTGCCACGA 62.668 55.000 25.94 0.00 46.05 4.35
2797 3536 3.800685 TTCCACCACGTGCCACGAG 62.801 63.158 25.94 16.58 46.05 4.18
2798 3537 4.293648 CCACCACGTGCCACGAGA 62.294 66.667 25.94 0.00 46.05 4.04
2799 3538 3.036084 CACCACGTGCCACGAGAC 61.036 66.667 25.94 0.00 46.05 3.36
2800 3539 3.533105 ACCACGTGCCACGAGACA 61.533 61.111 25.94 0.00 46.05 3.41
2801 3540 2.279851 CCACGTGCCACGAGACAA 60.280 61.111 25.94 0.00 46.05 3.18
2802 3541 2.594962 CCACGTGCCACGAGACAAC 61.595 63.158 25.94 0.00 46.05 3.32
2803 3542 1.880796 CACGTGCCACGAGACAACA 60.881 57.895 25.94 0.00 46.05 3.33
2804 3543 1.153529 ACGTGCCACGAGACAACAA 60.154 52.632 25.94 0.00 46.05 2.83
2805 3544 0.531974 ACGTGCCACGAGACAACAAT 60.532 50.000 25.94 0.00 46.05 2.71
2806 3545 0.163788 CGTGCCACGAGACAACAATC 59.836 55.000 12.85 0.00 46.05 2.67
2807 3546 1.225855 GTGCCACGAGACAACAATCA 58.774 50.000 0.00 0.00 0.00 2.57
2808 3547 1.601903 GTGCCACGAGACAACAATCAA 59.398 47.619 0.00 0.00 0.00 2.57
2809 3548 1.872952 TGCCACGAGACAACAATCAAG 59.127 47.619 0.00 0.00 0.00 3.02
2810 3549 1.400242 GCCACGAGACAACAATCAAGC 60.400 52.381 0.00 0.00 0.00 4.01
2811 3550 1.197721 CCACGAGACAACAATCAAGCC 59.802 52.381 0.00 0.00 0.00 4.35
2812 3551 2.146342 CACGAGACAACAATCAAGCCT 58.854 47.619 0.00 0.00 0.00 4.58
2813 3552 2.158449 CACGAGACAACAATCAAGCCTC 59.842 50.000 0.00 0.00 0.00 4.70
2814 3553 1.734465 CGAGACAACAATCAAGCCTCC 59.266 52.381 0.00 0.00 0.00 4.30
2815 3554 1.734465 GAGACAACAATCAAGCCTCCG 59.266 52.381 0.00 0.00 0.00 4.63
2816 3555 0.804989 GACAACAATCAAGCCTCCGG 59.195 55.000 0.00 0.00 0.00 5.14
2817 3556 0.110486 ACAACAATCAAGCCTCCGGT 59.890 50.000 0.00 0.00 0.00 5.28
2818 3557 1.349688 ACAACAATCAAGCCTCCGGTA 59.650 47.619 0.00 0.00 0.00 4.02
2819 3558 2.026262 ACAACAATCAAGCCTCCGGTAT 60.026 45.455 0.00 0.00 0.00 2.73
2820 3559 3.199071 ACAACAATCAAGCCTCCGGTATA 59.801 43.478 0.00 0.00 0.00 1.47
2821 3560 3.470645 ACAATCAAGCCTCCGGTATAC 57.529 47.619 0.00 0.00 0.00 1.47
2822 3561 3.039011 ACAATCAAGCCTCCGGTATACT 58.961 45.455 0.00 0.00 0.00 2.12
2823 3562 3.069729 ACAATCAAGCCTCCGGTATACTC 59.930 47.826 0.00 0.00 0.00 2.59
2824 3563 1.315690 TCAAGCCTCCGGTATACTCG 58.684 55.000 0.00 4.92 0.00 4.18
2825 3564 0.318784 CAAGCCTCCGGTATACTCGC 60.319 60.000 0.00 0.00 0.00 5.03
2826 3565 1.793134 AAGCCTCCGGTATACTCGCG 61.793 60.000 0.00 0.00 0.00 5.87
2827 3566 2.254651 CCTCCGGTATACTCGCGC 59.745 66.667 0.00 0.00 0.00 6.86
2828 3567 2.127345 CTCCGGTATACTCGCGCG 60.127 66.667 26.76 26.76 0.00 6.86
2829 3568 3.590443 CTCCGGTATACTCGCGCGG 62.590 68.421 31.69 22.52 0.00 6.46
2830 3569 3.653009 CCGGTATACTCGCGCGGA 61.653 66.667 31.69 16.31 0.00 5.54
2831 3570 2.328989 CGGTATACTCGCGCGGAA 59.671 61.111 31.69 16.07 0.00 4.30
2832 3571 1.724929 CGGTATACTCGCGCGGAAG 60.725 63.158 31.69 23.21 0.00 3.46
2833 3572 1.371389 GGTATACTCGCGCGGAAGG 60.371 63.158 31.69 19.12 0.00 3.46
2843 3582 3.200522 GCGGAAGGGAGCCAAATG 58.799 61.111 0.00 0.00 0.00 2.32
2844 3583 3.068729 GCGGAAGGGAGCCAAATGC 62.069 63.158 0.00 0.00 41.71 3.56
2853 3592 2.877691 GCCAAATGCGACCCTGTC 59.122 61.111 0.00 0.00 0.00 3.51
2854 3593 2.700773 GCCAAATGCGACCCTGTCC 61.701 63.158 0.00 0.00 0.00 4.02
2855 3594 2.046285 CCAAATGCGACCCTGTCCC 61.046 63.158 0.00 0.00 0.00 4.46
2856 3595 1.303236 CAAATGCGACCCTGTCCCA 60.303 57.895 0.00 0.00 0.00 4.37
2857 3596 1.002134 AAATGCGACCCTGTCCCAG 60.002 57.895 0.00 0.00 0.00 4.45
2858 3597 1.488705 AAATGCGACCCTGTCCCAGA 61.489 55.000 0.00 0.00 32.44 3.86
2859 3598 1.488705 AATGCGACCCTGTCCCAGAA 61.489 55.000 0.00 0.00 32.44 3.02
2860 3599 1.488705 ATGCGACCCTGTCCCAGAAA 61.489 55.000 0.00 0.00 32.44 2.52
2861 3600 1.072505 GCGACCCTGTCCCAGAAAA 59.927 57.895 0.00 0.00 32.44 2.29
2862 3601 0.322546 GCGACCCTGTCCCAGAAAAT 60.323 55.000 0.00 0.00 32.44 1.82
2863 3602 1.065709 GCGACCCTGTCCCAGAAAATA 60.066 52.381 0.00 0.00 32.44 1.40
2864 3603 2.421529 GCGACCCTGTCCCAGAAAATAT 60.422 50.000 0.00 0.00 32.44 1.28
2865 3604 3.206150 CGACCCTGTCCCAGAAAATATG 58.794 50.000 0.00 0.00 32.44 1.78
2866 3605 3.370527 CGACCCTGTCCCAGAAAATATGT 60.371 47.826 0.00 0.00 32.44 2.29
2867 3606 4.600062 GACCCTGTCCCAGAAAATATGTT 58.400 43.478 0.00 0.00 32.44 2.71
2868 3607 4.600062 ACCCTGTCCCAGAAAATATGTTC 58.400 43.478 0.00 0.00 32.44 3.18
2869 3608 3.954258 CCCTGTCCCAGAAAATATGTTCC 59.046 47.826 1.75 0.00 32.44 3.62
2870 3609 4.325344 CCCTGTCCCAGAAAATATGTTCCT 60.325 45.833 1.75 0.00 32.44 3.36
2871 3610 5.104109 CCCTGTCCCAGAAAATATGTTCCTA 60.104 44.000 1.75 0.00 32.44 2.94
2872 3611 6.058183 CCTGTCCCAGAAAATATGTTCCTAG 58.942 44.000 1.75 0.00 32.44 3.02
2873 3612 6.126768 CCTGTCCCAGAAAATATGTTCCTAGA 60.127 42.308 1.75 0.00 32.44 2.43
2874 3613 6.889198 TGTCCCAGAAAATATGTTCCTAGAG 58.111 40.000 1.75 0.00 0.00 2.43
2875 3614 5.760743 GTCCCAGAAAATATGTTCCTAGAGC 59.239 44.000 1.75 0.00 0.00 4.09
2876 3615 4.752101 CCCAGAAAATATGTTCCTAGAGCG 59.248 45.833 1.75 0.00 0.00 5.03
2877 3616 4.752101 CCAGAAAATATGTTCCTAGAGCGG 59.248 45.833 1.75 0.00 0.00 5.52
2878 3617 4.212214 CAGAAAATATGTTCCTAGAGCGGC 59.788 45.833 1.75 0.00 0.00 6.53
2879 3618 4.101741 AGAAAATATGTTCCTAGAGCGGCT 59.898 41.667 0.00 0.00 0.00 5.52
2880 3619 3.669251 AATATGTTCCTAGAGCGGCTC 57.331 47.619 22.13 22.13 0.00 4.70
2881 3620 2.366640 TATGTTCCTAGAGCGGCTCT 57.633 50.000 32.68 32.68 43.83 4.09
2882 3621 1.490574 ATGTTCCTAGAGCGGCTCTT 58.509 50.000 34.83 19.81 41.50 2.85
2883 3622 0.818296 TGTTCCTAGAGCGGCTCTTC 59.182 55.000 34.83 20.03 41.50 2.87
2884 3623 0.818296 GTTCCTAGAGCGGCTCTTCA 59.182 55.000 34.83 18.79 41.50 3.02
2885 3624 1.204941 GTTCCTAGAGCGGCTCTTCAA 59.795 52.381 34.83 21.79 41.50 2.69
2886 3625 1.107114 TCCTAGAGCGGCTCTTCAAG 58.893 55.000 34.83 25.32 41.50 3.02
2894 3633 4.625800 GCTCTTCAAGCCATCCGT 57.374 55.556 0.00 0.00 45.92 4.69
2895 3634 2.093216 GCTCTTCAAGCCATCCGTG 58.907 57.895 0.00 0.00 45.92 4.94
2896 3635 0.391661 GCTCTTCAAGCCATCCGTGA 60.392 55.000 0.00 0.00 45.92 4.35
2897 3636 1.363744 CTCTTCAAGCCATCCGTGAC 58.636 55.000 0.00 0.00 31.55 3.67
2898 3637 0.976641 TCTTCAAGCCATCCGTGACT 59.023 50.000 0.00 0.00 31.55 3.41
2899 3638 1.347707 TCTTCAAGCCATCCGTGACTT 59.652 47.619 0.00 0.00 31.55 3.01
2900 3639 1.466167 CTTCAAGCCATCCGTGACTTG 59.534 52.381 0.00 0.00 44.35 3.16
2901 3640 0.321564 TCAAGCCATCCGTGACTTGG 60.322 55.000 4.97 0.00 43.51 3.61
2903 3642 3.499737 GCCATCCGTGACTTGGCG 61.500 66.667 5.52 0.00 45.75 5.69
2904 3643 2.264480 CCATCCGTGACTTGGCGA 59.736 61.111 0.00 0.00 0.00 5.54
2905 3644 1.811266 CCATCCGTGACTTGGCGAG 60.811 63.158 0.00 0.00 0.00 5.03
2906 3645 1.811266 CATCCGTGACTTGGCGAGG 60.811 63.158 6.71 0.00 0.00 4.63
2907 3646 3.665675 ATCCGTGACTTGGCGAGGC 62.666 63.158 6.71 3.02 0.00 4.70
2909 3648 4.717629 CGTGACTTGGCGAGGCGA 62.718 66.667 6.71 0.00 35.50 5.54
2910 3649 2.357034 GTGACTTGGCGAGGCGAA 60.357 61.111 6.71 0.00 35.50 4.70
2911 3650 1.959226 GTGACTTGGCGAGGCGAAA 60.959 57.895 6.71 0.00 35.50 3.46
2912 3651 1.667830 TGACTTGGCGAGGCGAAAG 60.668 57.895 6.71 0.00 35.50 2.62
2925 3664 2.885502 CGAAAGCTTTGCCACAACC 58.114 52.632 18.30 0.00 0.00 3.77
2926 3665 0.597377 CGAAAGCTTTGCCACAACCC 60.597 55.000 18.30 0.00 0.00 4.11
2927 3666 0.249868 GAAAGCTTTGCCACAACCCC 60.250 55.000 18.30 0.00 0.00 4.95
2928 3667 0.690744 AAAGCTTTGCCACAACCCCT 60.691 50.000 11.80 0.00 0.00 4.79
2929 3668 1.402107 AAGCTTTGCCACAACCCCTG 61.402 55.000 0.00 0.00 0.00 4.45
2930 3669 2.736531 CTTTGCCACAACCCCTGC 59.263 61.111 0.00 0.00 0.00 4.85
2931 3670 3.211564 CTTTGCCACAACCCCTGCG 62.212 63.158 0.00 0.00 0.00 5.18
2948 3687 2.975799 GGACGCCGGCAAACTCAA 60.976 61.111 28.98 0.00 0.00 3.02
2949 3688 2.251371 GACGCCGGCAAACTCAAC 59.749 61.111 28.98 3.88 0.00 3.18
2950 3689 2.203153 ACGCCGGCAAACTCAACT 60.203 55.556 28.98 0.00 0.00 3.16
2951 3690 2.171489 GACGCCGGCAAACTCAACTC 62.171 60.000 28.98 1.92 0.00 3.01
2952 3691 2.954611 GCCGGCAAACTCAACTCC 59.045 61.111 24.80 0.00 0.00 3.85
2953 3692 1.600916 GCCGGCAAACTCAACTCCT 60.601 57.895 24.80 0.00 0.00 3.69
2954 3693 1.578206 GCCGGCAAACTCAACTCCTC 61.578 60.000 24.80 0.00 0.00 3.71
2955 3694 1.291877 CCGGCAAACTCAACTCCTCG 61.292 60.000 0.00 0.00 0.00 4.63
2956 3695 1.291877 CGGCAAACTCAACTCCTCGG 61.292 60.000 0.00 0.00 0.00 4.63
2957 3696 1.578206 GGCAAACTCAACTCCTCGGC 61.578 60.000 0.00 0.00 0.00 5.54
2958 3697 0.884704 GCAAACTCAACTCCTCGGCA 60.885 55.000 0.00 0.00 0.00 5.69
2959 3698 1.813513 CAAACTCAACTCCTCGGCAT 58.186 50.000 0.00 0.00 0.00 4.40
2960 3699 1.734465 CAAACTCAACTCCTCGGCATC 59.266 52.381 0.00 0.00 0.00 3.91
2961 3700 0.250513 AACTCAACTCCTCGGCATCC 59.749 55.000 0.00 0.00 0.00 3.51
2962 3701 0.904865 ACTCAACTCCTCGGCATCCA 60.905 55.000 0.00 0.00 0.00 3.41
2963 3702 0.250234 CTCAACTCCTCGGCATCCAA 59.750 55.000 0.00 0.00 0.00 3.53
2964 3703 0.250234 TCAACTCCTCGGCATCCAAG 59.750 55.000 0.00 0.00 0.00 3.61
2965 3704 0.745845 CAACTCCTCGGCATCCAAGG 60.746 60.000 0.00 0.00 0.00 3.61
2966 3705 0.909610 AACTCCTCGGCATCCAAGGA 60.910 55.000 0.00 0.00 37.61 3.36
2967 3706 0.692419 ACTCCTCGGCATCCAAGGAT 60.692 55.000 0.00 0.00 38.49 3.24
2976 3715 3.788672 ATCCAAGGATGACGAAGGC 57.211 52.632 0.00 0.00 32.98 4.35
2977 3716 0.911769 ATCCAAGGATGACGAAGGCA 59.088 50.000 0.00 0.00 32.98 4.75
2978 3717 0.911769 TCCAAGGATGACGAAGGCAT 59.088 50.000 0.00 0.00 0.00 4.40
2979 3718 2.115427 TCCAAGGATGACGAAGGCATA 58.885 47.619 0.00 0.00 0.00 3.14
2980 3719 2.503765 TCCAAGGATGACGAAGGCATAA 59.496 45.455 0.00 0.00 0.00 1.90
2981 3720 3.136443 TCCAAGGATGACGAAGGCATAAT 59.864 43.478 0.00 0.00 0.00 1.28
2982 3721 4.346709 TCCAAGGATGACGAAGGCATAATA 59.653 41.667 0.00 0.00 0.00 0.98
2983 3722 4.692625 CCAAGGATGACGAAGGCATAATAG 59.307 45.833 0.00 0.00 0.00 1.73
2984 3723 4.543590 AGGATGACGAAGGCATAATAGG 57.456 45.455 0.00 0.00 0.00 2.57
2985 3724 4.160329 AGGATGACGAAGGCATAATAGGA 58.840 43.478 0.00 0.00 0.00 2.94
2986 3725 4.221703 AGGATGACGAAGGCATAATAGGAG 59.778 45.833 0.00 0.00 0.00 3.69
2987 3726 4.499183 GATGACGAAGGCATAATAGGAGG 58.501 47.826 0.00 0.00 0.00 4.30
2988 3727 2.037251 TGACGAAGGCATAATAGGAGGC 59.963 50.000 0.00 0.00 0.00 4.70
2989 3728 2.300437 GACGAAGGCATAATAGGAGGCT 59.700 50.000 0.00 0.00 40.14 4.58
2991 3730 3.070018 CGAAGGCATAATAGGAGGCTTG 58.930 50.000 5.17 0.00 46.40 4.01
2992 3731 3.416156 GAAGGCATAATAGGAGGCTTGG 58.584 50.000 5.17 0.00 46.40 3.61
2993 3732 1.074566 AGGCATAATAGGAGGCTTGGC 59.925 52.381 0.00 0.00 34.14 4.52
2994 3733 1.160137 GCATAATAGGAGGCTTGGCG 58.840 55.000 0.00 0.00 0.00 5.69
2995 3734 1.813513 CATAATAGGAGGCTTGGCGG 58.186 55.000 0.00 0.00 0.00 6.13
2996 3735 1.072331 CATAATAGGAGGCTTGGCGGT 59.928 52.381 0.00 0.00 0.00 5.68
2997 3736 0.756903 TAATAGGAGGCTTGGCGGTC 59.243 55.000 0.00 0.00 0.00 4.79
2998 3737 2.311688 AATAGGAGGCTTGGCGGTCG 62.312 60.000 0.00 0.00 0.00 4.79
2999 3738 3.949885 TAGGAGGCTTGGCGGTCGA 62.950 63.158 0.00 0.00 0.00 4.20
3000 3739 4.388499 GGAGGCTTGGCGGTCGAA 62.388 66.667 0.00 0.00 0.00 3.71
3001 3740 2.815647 GAGGCTTGGCGGTCGAAG 60.816 66.667 0.00 0.00 0.00 3.79
3002 3741 3.296709 GAGGCTTGGCGGTCGAAGA 62.297 63.158 0.00 0.00 0.00 2.87
3003 3742 2.358247 GGCTTGGCGGTCGAAGAA 60.358 61.111 0.00 0.00 39.69 2.52
3004 3743 2.391389 GGCTTGGCGGTCGAAGAAG 61.391 63.158 0.00 0.00 39.69 2.85
3005 3744 3.028366 GCTTGGCGGTCGAAGAAGC 62.028 63.158 0.00 0.00 39.69 3.86
3006 3745 1.667830 CTTGGCGGTCGAAGAAGCA 60.668 57.895 0.00 0.00 42.78 3.91
3007 3746 1.003839 TTGGCGGTCGAAGAAGCAT 60.004 52.632 0.00 0.00 42.78 3.79
3008 3747 0.248012 TTGGCGGTCGAAGAAGCATA 59.752 50.000 0.00 0.00 42.78 3.14
3009 3748 0.459585 TGGCGGTCGAAGAAGCATAC 60.460 55.000 0.00 0.00 42.78 2.39
3010 3749 0.179108 GGCGGTCGAAGAAGCATACT 60.179 55.000 0.00 0.00 42.78 2.12
3011 3750 1.201343 GCGGTCGAAGAAGCATACTC 58.799 55.000 0.00 0.00 41.11 2.59
3012 3751 1.467875 CGGTCGAAGAAGCATACTCG 58.532 55.000 0.00 0.00 39.69 4.18
3013 3752 1.841450 GGTCGAAGAAGCATACTCGG 58.159 55.000 0.00 0.00 39.69 4.63
3014 3753 1.201343 GTCGAAGAAGCATACTCGGC 58.799 55.000 0.00 0.00 39.69 5.54
3015 3754 0.102481 TCGAAGAAGCATACTCGGCC 59.898 55.000 0.00 0.00 0.00 6.13
3016 3755 0.876342 CGAAGAAGCATACTCGGCCC 60.876 60.000 0.00 0.00 0.00 5.80
3017 3756 0.178068 GAAGAAGCATACTCGGCCCA 59.822 55.000 0.00 0.00 0.00 5.36
3018 3757 0.839946 AAGAAGCATACTCGGCCCAT 59.160 50.000 0.00 0.00 0.00 4.00
3019 3758 0.107456 AGAAGCATACTCGGCCCATG 59.893 55.000 0.00 0.00 0.00 3.66
3020 3759 0.106708 GAAGCATACTCGGCCCATGA 59.893 55.000 0.00 0.00 0.00 3.07
3021 3760 0.546122 AAGCATACTCGGCCCATGAA 59.454 50.000 0.00 0.00 0.00 2.57
3022 3761 0.107456 AGCATACTCGGCCCATGAAG 59.893 55.000 0.00 0.00 0.00 3.02
3023 3762 0.179045 GCATACTCGGCCCATGAAGT 60.179 55.000 0.00 0.00 0.00 3.01
3024 3763 1.070134 GCATACTCGGCCCATGAAGTA 59.930 52.381 0.00 0.00 0.00 2.24
3025 3764 2.484770 GCATACTCGGCCCATGAAGTAA 60.485 50.000 0.00 0.00 0.00 2.24
3026 3765 3.807209 GCATACTCGGCCCATGAAGTAAT 60.807 47.826 0.00 0.00 0.00 1.89
3027 3766 2.332063 ACTCGGCCCATGAAGTAATG 57.668 50.000 0.00 0.00 0.00 1.90
3028 3767 1.134098 ACTCGGCCCATGAAGTAATGG 60.134 52.381 0.00 0.00 45.82 3.16
3029 3768 0.465460 TCGGCCCATGAAGTAATGGC 60.465 55.000 0.00 0.00 45.03 4.40
3030 3769 0.751277 CGGCCCATGAAGTAATGGCA 60.751 55.000 8.81 0.00 45.03 4.92
3031 3770 1.035139 GGCCCATGAAGTAATGGCAG 58.965 55.000 8.81 0.00 45.03 4.85
3032 3771 1.686115 GGCCCATGAAGTAATGGCAGT 60.686 52.381 8.81 0.00 45.03 4.40
3033 3772 2.102578 GCCCATGAAGTAATGGCAGTT 58.897 47.619 0.00 0.00 45.03 3.16
3034 3773 3.287222 GCCCATGAAGTAATGGCAGTTA 58.713 45.455 0.00 0.00 45.03 2.24
3035 3774 3.891366 GCCCATGAAGTAATGGCAGTTAT 59.109 43.478 0.00 0.00 45.03 1.89
3036 3775 4.022849 GCCCATGAAGTAATGGCAGTTATC 60.023 45.833 0.00 0.00 45.03 1.75
3037 3776 5.380043 CCCATGAAGTAATGGCAGTTATCT 58.620 41.667 0.00 0.00 45.03 1.98
3038 3777 5.471456 CCCATGAAGTAATGGCAGTTATCTC 59.529 44.000 0.00 0.00 45.03 2.75
3039 3778 6.057533 CCATGAAGTAATGGCAGTTATCTCA 58.942 40.000 0.00 0.57 40.74 3.27
3040 3779 6.017605 CCATGAAGTAATGGCAGTTATCTCAC 60.018 42.308 0.00 0.00 40.74 3.51
3041 3780 5.428253 TGAAGTAATGGCAGTTATCTCACC 58.572 41.667 0.00 0.00 0.00 4.02
3042 3781 5.045942 TGAAGTAATGGCAGTTATCTCACCA 60.046 40.000 0.00 0.00 33.30 4.17
3043 3782 5.636903 AGTAATGGCAGTTATCTCACCAT 57.363 39.130 0.00 0.00 38.53 3.55
3044 3783 5.615289 AGTAATGGCAGTTATCTCACCATC 58.385 41.667 0.00 0.00 36.94 3.51
3045 3784 2.602257 TGGCAGTTATCTCACCATCG 57.398 50.000 0.00 0.00 0.00 3.84
3046 3785 2.107366 TGGCAGTTATCTCACCATCGA 58.893 47.619 0.00 0.00 0.00 3.59
3047 3786 2.159099 TGGCAGTTATCTCACCATCGAC 60.159 50.000 0.00 0.00 0.00 4.20
3048 3787 2.474816 GCAGTTATCTCACCATCGACC 58.525 52.381 0.00 0.00 0.00 4.79
3049 3788 2.732366 CAGTTATCTCACCATCGACCG 58.268 52.381 0.00 0.00 0.00 4.79
3050 3789 2.357952 CAGTTATCTCACCATCGACCGA 59.642 50.000 0.00 0.00 0.00 4.69
3051 3790 2.619177 AGTTATCTCACCATCGACCGAG 59.381 50.000 0.00 0.00 0.00 4.63
3052 3791 0.952280 TATCTCACCATCGACCGAGC 59.048 55.000 0.00 0.00 0.00 5.03
3053 3792 1.739338 ATCTCACCATCGACCGAGCC 61.739 60.000 0.00 0.00 0.00 4.70
3054 3793 3.432051 CTCACCATCGACCGAGCCC 62.432 68.421 0.00 0.00 0.00 5.19
3055 3794 3.461773 CACCATCGACCGAGCCCT 61.462 66.667 0.00 0.00 0.00 5.19
3056 3795 2.683933 ACCATCGACCGAGCCCTT 60.684 61.111 0.00 0.00 0.00 3.95
3057 3796 2.107141 CCATCGACCGAGCCCTTC 59.893 66.667 0.00 0.00 0.00 3.46
3058 3797 2.107141 CATCGACCGAGCCCTTCC 59.893 66.667 0.00 0.00 0.00 3.46
3059 3798 2.042843 ATCGACCGAGCCCTTCCT 60.043 61.111 0.00 0.00 0.00 3.36
3060 3799 2.128507 ATCGACCGAGCCCTTCCTC 61.129 63.158 0.00 0.00 0.00 3.71
3070 3809 3.927854 GAGCCCTTCCTCGGATATTTAC 58.072 50.000 0.00 0.00 0.00 2.01
3071 3810 3.579151 GAGCCCTTCCTCGGATATTTACT 59.421 47.826 0.00 0.00 0.00 2.24
3072 3811 3.579151 AGCCCTTCCTCGGATATTTACTC 59.421 47.826 0.00 0.00 0.00 2.59
3073 3812 3.306849 GCCCTTCCTCGGATATTTACTCC 60.307 52.174 0.00 0.00 0.00 3.85
3082 3821 2.475487 GGATATTTACTCCGCAACGAGC 59.525 50.000 0.00 0.00 40.87 5.03
3083 3822 2.953466 TATTTACTCCGCAACGAGCT 57.047 45.000 0.00 0.00 42.61 4.09
3084 3823 1.359848 ATTTACTCCGCAACGAGCTG 58.640 50.000 0.00 0.00 42.61 4.24
3085 3824 1.289109 TTTACTCCGCAACGAGCTGC 61.289 55.000 0.00 0.00 42.61 5.25
3086 3825 3.642778 TACTCCGCAACGAGCTGCC 62.643 63.158 0.00 0.00 42.61 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 1.763770 CAGTGGCTTCACCTCCCTT 59.236 57.895 0.00 0.00 42.13 3.95
8 9 2.227036 CCAGTGGCTTCACCTCCCT 61.227 63.158 0.00 0.00 42.13 4.20
11 12 1.302832 CCACCAGTGGCTTCACCTC 60.303 63.158 9.78 0.00 44.73 3.85
165 168 2.512515 CTTGCCTCCCGCTACTGC 60.513 66.667 0.00 0.00 38.78 4.40
223 226 2.093106 GACACCTCGATAGCCGGATAT 58.907 52.381 13.07 13.07 39.14 1.63
251 254 3.069729 GTCTGTACCATCCGCCTTTATCT 59.930 47.826 0.00 0.00 0.00 1.98
257 260 2.423898 CCGTCTGTACCATCCGCCT 61.424 63.158 0.00 0.00 0.00 5.52
299 302 7.606073 TGATAAGAAATCTTGTGTTTCCATCGA 59.394 33.333 5.93 0.00 36.48 3.59
302 305 8.734386 GTCTGATAAGAAATCTTGTGTTTCCAT 58.266 33.333 5.93 0.00 36.48 3.41
317 320 3.550233 GCGGCGACATAGTCTGATAAGAA 60.550 47.826 12.98 0.00 0.00 2.52
336 339 2.098871 CATGACACATGCACGCGG 59.901 61.111 12.47 0.00 0.00 6.46
344 347 0.897621 TCAGCGAGGACATGACACAT 59.102 50.000 0.00 0.00 0.00 3.21
351 354 1.251527 ACGACCTTCAGCGAGGACAT 61.252 55.000 10.27 0.00 39.25 3.06
358 362 0.389817 TCAATCCACGACCTTCAGCG 60.390 55.000 0.00 0.00 0.00 5.18
368 372 0.883833 AAGCCAAGCTTCAATCCACG 59.116 50.000 0.00 0.00 46.77 4.94
495 502 9.374711 TCCCTATGATACAAGACACAACATATA 57.625 33.333 0.00 0.00 0.00 0.86
496 503 8.262601 TCCCTATGATACAAGACACAACATAT 57.737 34.615 0.00 0.00 0.00 1.78
561 568 2.107366 CGGAAAATAAACCATGGGGCT 58.893 47.619 18.09 1.93 37.90 5.19
565 572 7.011016 GGAAATAAAGCGGAAAATAAACCATGG 59.989 37.037 11.19 11.19 0.00 3.66
568 575 6.072064 TCGGAAATAAAGCGGAAAATAAACCA 60.072 34.615 0.00 0.00 0.00 3.67
574 581 6.451064 AGAATCGGAAATAAAGCGGAAAAT 57.549 33.333 0.00 0.00 0.00 1.82
594 601 1.223487 GCAGCCGAACCCCATAGAA 59.777 57.895 0.00 0.00 0.00 2.10
597 604 2.589540 CAGCAGCCGAACCCCATA 59.410 61.111 0.00 0.00 0.00 2.74
602 609 0.109132 CAAAATCCAGCAGCCGAACC 60.109 55.000 0.00 0.00 0.00 3.62
646 657 3.261643 CCACTGCATCAGGGCTATACATA 59.738 47.826 0.00 0.00 32.80 2.29
653 664 0.921896 ATAACCACTGCATCAGGGCT 59.078 50.000 0.00 0.00 32.80 5.19
655 666 1.027357 GCATAACCACTGCATCAGGG 58.973 55.000 0.00 0.00 39.46 4.45
682 693 6.058833 GGGGGCTCACAATTTTTCTTAAAAA 58.941 36.000 0.47 0.47 43.76 1.94
683 694 5.616270 GGGGGCTCACAATTTTTCTTAAAA 58.384 37.500 0.00 0.00 37.62 1.52
684 695 4.262249 CGGGGGCTCACAATTTTTCTTAAA 60.262 41.667 0.00 0.00 0.00 1.52
685 696 3.257127 CGGGGGCTCACAATTTTTCTTAA 59.743 43.478 0.00 0.00 0.00 1.85
686 697 2.823154 CGGGGGCTCACAATTTTTCTTA 59.177 45.455 0.00 0.00 0.00 2.10
687 698 1.618343 CGGGGGCTCACAATTTTTCTT 59.382 47.619 0.00 0.00 0.00 2.52
688 699 1.256812 CGGGGGCTCACAATTTTTCT 58.743 50.000 0.00 0.00 0.00 2.52
689 700 0.966179 ACGGGGGCTCACAATTTTTC 59.034 50.000 0.00 0.00 0.00 2.29
690 701 1.343142 GAACGGGGGCTCACAATTTTT 59.657 47.619 0.00 0.00 0.00 1.94
691 702 0.966179 GAACGGGGGCTCACAATTTT 59.034 50.000 0.00 0.00 0.00 1.82
692 703 0.898326 GGAACGGGGGCTCACAATTT 60.898 55.000 0.00 0.00 0.00 1.82
693 704 1.304134 GGAACGGGGGCTCACAATT 60.304 57.895 0.00 0.00 0.00 2.32
694 705 2.355115 GGAACGGGGGCTCACAAT 59.645 61.111 0.00 0.00 0.00 2.71
812 838 2.248835 CCCTTGAACGCGTTTCCGT 61.249 57.895 27.32 2.07 44.41 4.69
856 882 3.866327 GCAGGCTGTTACTAGAAGCTAAC 59.134 47.826 17.16 0.00 37.12 2.34
1101 1194 1.077501 CATCATCTTGGCCACCGGT 60.078 57.895 3.88 0.00 0.00 5.28
1428 1521 1.518302 GAAAGCCTCCTCGGACTCC 59.482 63.158 0.00 0.00 33.16 3.85
1442 1535 0.400594 ACACTTCTTCCCCCGGAAAG 59.599 55.000 0.73 3.72 41.54 2.62
1443 1536 0.109723 CACACTTCTTCCCCCGGAAA 59.890 55.000 0.73 0.00 41.54 3.13
1444 1537 1.758592 CACACTTCTTCCCCCGGAA 59.241 57.895 0.73 0.00 39.66 4.30
2106 2250 2.498167 CTCACAAGCTGTTGTAGGCTT 58.502 47.619 0.00 0.00 45.57 4.35
2107 2251 1.271054 CCTCACAAGCTGTTGTAGGCT 60.271 52.381 0.00 0.00 45.57 4.58
2109 2253 2.549754 CAACCTCACAAGCTGTTGTAGG 59.450 50.000 4.60 7.84 45.57 3.18
2110 2254 3.206150 ACAACCTCACAAGCTGTTGTAG 58.794 45.455 14.34 3.23 46.76 2.74
2111 2255 3.275617 ACAACCTCACAAGCTGTTGTA 57.724 42.857 14.34 0.00 46.76 2.41
2147 2355 4.724399 ACTGACCACAACCATTACATTGA 58.276 39.130 0.00 0.00 0.00 2.57
2163 2371 8.671921 CCATTATATTGCTGATCATAACTGACC 58.328 37.037 0.00 0.00 33.22 4.02
2355 3061 3.799366 ACACGGTCACAAAATCTACACA 58.201 40.909 0.00 0.00 0.00 3.72
2372 3083 1.064803 TGCTGTGCCTTGTTTTACACG 59.935 47.619 0.00 0.00 35.79 4.49
2420 3131 4.627058 TGTACGTTCAAGCAAAGATCTCA 58.373 39.130 0.00 0.00 0.00 3.27
2428 3139 4.201871 CCAACTTCTTGTACGTTCAAGCAA 60.202 41.667 25.06 18.87 42.90 3.91
2448 3159 2.679429 AAACCCGGTCATAAACCCAA 57.321 45.000 0.00 0.00 46.27 4.12
2555 3275 2.048127 GCTATCTTAGCGCGGGGG 60.048 66.667 8.83 0.00 42.62 5.40
2684 3423 3.081061 CGAAATCCCCATTGACTTGTGA 58.919 45.455 0.00 0.00 0.00 3.58
2685 3424 3.081061 TCGAAATCCCCATTGACTTGTG 58.919 45.455 0.00 0.00 0.00 3.33
2686 3425 3.433306 TCGAAATCCCCATTGACTTGT 57.567 42.857 0.00 0.00 0.00 3.16
2687 3426 3.489738 GCATCGAAATCCCCATTGACTTG 60.490 47.826 0.00 0.00 0.00 3.16
2688 3427 2.689983 GCATCGAAATCCCCATTGACTT 59.310 45.455 0.00 0.00 0.00 3.01
2689 3428 2.301346 GCATCGAAATCCCCATTGACT 58.699 47.619 0.00 0.00 0.00 3.41
2690 3429 1.338020 GGCATCGAAATCCCCATTGAC 59.662 52.381 0.00 0.00 0.00 3.18
2691 3430 1.064091 TGGCATCGAAATCCCCATTGA 60.064 47.619 0.00 0.00 0.00 2.57
2692 3431 1.401761 TGGCATCGAAATCCCCATTG 58.598 50.000 0.00 0.00 0.00 2.82
2693 3432 2.157640 TTGGCATCGAAATCCCCATT 57.842 45.000 0.00 0.00 0.00 3.16
2694 3433 2.157640 TTTGGCATCGAAATCCCCAT 57.842 45.000 0.00 0.00 0.00 4.00
2695 3434 2.157640 ATTTGGCATCGAAATCCCCA 57.842 45.000 0.00 0.00 0.00 4.96
2696 3435 3.193479 GGATATTTGGCATCGAAATCCCC 59.807 47.826 0.00 0.00 0.00 4.81
2697 3436 3.826157 TGGATATTTGGCATCGAAATCCC 59.174 43.478 0.00 4.29 30.89 3.85
2698 3437 5.452078 TTGGATATTTGGCATCGAAATCC 57.548 39.130 0.00 0.00 31.66 3.01
2699 3438 7.769272 TTTTTGGATATTTGGCATCGAAATC 57.231 32.000 0.00 0.00 32.46 2.17
2700 3439 7.986320 TCATTTTTGGATATTTGGCATCGAAAT 59.014 29.630 0.00 0.00 32.46 2.17
2701 3440 7.277539 GTCATTTTTGGATATTTGGCATCGAAA 59.722 33.333 0.00 0.00 31.04 3.46
2702 3441 6.756074 GTCATTTTTGGATATTTGGCATCGAA 59.244 34.615 0.00 0.00 0.00 3.71
2703 3442 6.272318 GTCATTTTTGGATATTTGGCATCGA 58.728 36.000 0.00 0.00 0.00 3.59
2704 3443 5.463061 GGTCATTTTTGGATATTTGGCATCG 59.537 40.000 0.00 0.00 0.00 3.84
2705 3444 5.463061 CGGTCATTTTTGGATATTTGGCATC 59.537 40.000 0.00 0.00 0.00 3.91
2706 3445 5.358922 CGGTCATTTTTGGATATTTGGCAT 58.641 37.500 0.00 0.00 0.00 4.40
2707 3446 4.753233 CGGTCATTTTTGGATATTTGGCA 58.247 39.130 0.00 0.00 0.00 4.92
2708 3447 3.555547 GCGGTCATTTTTGGATATTTGGC 59.444 43.478 0.00 0.00 0.00 4.52
2709 3448 4.753233 TGCGGTCATTTTTGGATATTTGG 58.247 39.130 0.00 0.00 0.00 3.28
2710 3449 7.866898 TGATATGCGGTCATTTTTGGATATTTG 59.133 33.333 0.00 0.00 34.22 2.32
2711 3450 7.950512 TGATATGCGGTCATTTTTGGATATTT 58.049 30.769 0.00 0.00 34.22 1.40
2712 3451 7.523293 TGATATGCGGTCATTTTTGGATATT 57.477 32.000 0.00 0.00 34.22 1.28
2713 3452 7.523293 TTGATATGCGGTCATTTTTGGATAT 57.477 32.000 0.00 0.00 34.22 1.63
2714 3453 6.951062 TTGATATGCGGTCATTTTTGGATA 57.049 33.333 0.00 0.00 34.22 2.59
2715 3454 5.850557 TTGATATGCGGTCATTTTTGGAT 57.149 34.783 0.00 0.00 34.22 3.41
2716 3455 5.651387 TTTGATATGCGGTCATTTTTGGA 57.349 34.783 0.00 0.00 34.22 3.53
2717 3456 5.220191 CGTTTTGATATGCGGTCATTTTTGG 60.220 40.000 0.00 0.00 34.22 3.28
2718 3457 5.720971 GCGTTTTGATATGCGGTCATTTTTG 60.721 40.000 0.00 0.00 34.22 2.44
2719 3458 4.326009 GCGTTTTGATATGCGGTCATTTTT 59.674 37.500 0.00 0.00 34.22 1.94
2720 3459 3.857093 GCGTTTTGATATGCGGTCATTTT 59.143 39.130 0.00 0.00 34.22 1.82
2721 3460 3.128589 AGCGTTTTGATATGCGGTCATTT 59.871 39.130 0.00 0.00 35.20 2.32
2722 3461 2.682856 AGCGTTTTGATATGCGGTCATT 59.317 40.909 0.00 0.00 35.20 2.57
2723 3462 2.032054 CAGCGTTTTGATATGCGGTCAT 59.968 45.455 0.00 0.00 35.20 3.06
2724 3463 1.396648 CAGCGTTTTGATATGCGGTCA 59.603 47.619 0.00 0.00 35.20 4.02
2725 3464 1.396996 ACAGCGTTTTGATATGCGGTC 59.603 47.619 0.00 0.00 34.08 4.79
2726 3465 1.448985 ACAGCGTTTTGATATGCGGT 58.551 45.000 0.00 0.00 34.35 5.68
2727 3466 2.542766 AACAGCGTTTTGATATGCGG 57.457 45.000 0.00 0.00 35.20 5.69
2728 3467 3.059306 CCAAAACAGCGTTTTGATATGCG 59.941 43.478 30.62 18.05 40.73 4.73
2729 3468 3.181531 GCCAAAACAGCGTTTTGATATGC 60.182 43.478 30.62 24.50 40.73 3.14
2730 3469 4.236935 AGCCAAAACAGCGTTTTGATATG 58.763 39.130 30.62 21.16 40.73 1.78
2731 3470 4.519540 AGCCAAAACAGCGTTTTGATAT 57.480 36.364 30.62 19.99 40.73 1.63
2732 3471 5.414454 AGATAGCCAAAACAGCGTTTTGATA 59.586 36.000 30.62 24.87 40.73 2.15
2733 3472 2.888834 AGCCAAAACAGCGTTTTGAT 57.111 40.000 30.62 21.80 40.73 2.57
2734 3473 3.568007 AGATAGCCAAAACAGCGTTTTGA 59.432 39.130 30.62 19.75 40.73 2.69
2735 3474 3.900941 AGATAGCCAAAACAGCGTTTTG 58.099 40.909 26.09 26.09 38.68 2.44
2736 3475 4.298332 CAAGATAGCCAAAACAGCGTTTT 58.702 39.130 11.79 11.79 34.64 2.43
2737 3476 3.305335 CCAAGATAGCCAAAACAGCGTTT 60.305 43.478 1.61 1.61 34.64 3.60
2738 3477 2.228822 CCAAGATAGCCAAAACAGCGTT 59.771 45.455 0.00 0.00 34.64 4.84
2739 3478 1.812571 CCAAGATAGCCAAAACAGCGT 59.187 47.619 0.00 0.00 34.64 5.07
2740 3479 1.468054 GCCAAGATAGCCAAAACAGCG 60.468 52.381 0.00 0.00 34.64 5.18
2741 3480 2.284263 GCCAAGATAGCCAAAACAGC 57.716 50.000 0.00 0.00 0.00 4.40
2750 3489 1.959282 CCTCAAATGGGCCAAGATAGC 59.041 52.381 11.89 0.00 0.00 2.97
2751 3490 2.590821 CCCTCAAATGGGCCAAGATAG 58.409 52.381 11.89 6.32 40.84 2.08
2752 3491 2.754012 CCCTCAAATGGGCCAAGATA 57.246 50.000 11.89 0.00 40.84 1.98
2753 3492 3.621419 CCCTCAAATGGGCCAAGAT 57.379 52.632 11.89 0.00 40.84 2.40
2761 3500 1.758862 GAATTCCAGGCCCTCAAATGG 59.241 52.381 0.00 0.00 0.00 3.16
2762 3501 1.758862 GGAATTCCAGGCCCTCAAATG 59.241 52.381 20.04 0.00 35.64 2.32
2763 3502 1.362237 TGGAATTCCAGGCCCTCAAAT 59.638 47.619 23.63 0.00 42.01 2.32
2764 3503 0.783206 TGGAATTCCAGGCCCTCAAA 59.217 50.000 23.63 0.00 42.01 2.69
2765 3504 2.485396 TGGAATTCCAGGCCCTCAA 58.515 52.632 23.63 0.00 42.01 3.02
2766 3505 4.266939 TGGAATTCCAGGCCCTCA 57.733 55.556 23.63 0.00 42.01 3.86
2774 3513 1.602323 GGCACGTGGTGGAATTCCA 60.602 57.895 23.63 23.63 45.30 3.53
2775 3514 1.602323 TGGCACGTGGTGGAATTCC 60.602 57.895 18.17 18.17 33.64 3.01
2776 3515 1.579429 GTGGCACGTGGTGGAATTC 59.421 57.895 18.88 0.00 33.64 2.17
2777 3516 2.258013 CGTGGCACGTGGTGGAATT 61.258 57.895 30.56 0.00 36.74 2.17
2778 3517 2.668212 CGTGGCACGTGGTGGAAT 60.668 61.111 30.56 0.00 36.74 3.01
2779 3518 3.800685 CTCGTGGCACGTGGTGGAA 62.801 63.158 35.65 16.59 43.14 3.53
2780 3519 4.293648 CTCGTGGCACGTGGTGGA 62.294 66.667 35.65 17.31 43.14 4.02
2781 3520 4.293648 TCTCGTGGCACGTGGTGG 62.294 66.667 35.65 21.57 43.14 4.61
2782 3521 3.036084 GTCTCGTGGCACGTGGTG 61.036 66.667 35.65 23.79 43.14 4.17
2783 3522 3.083848 TTGTCTCGTGGCACGTGGT 62.084 57.895 35.65 0.00 43.14 4.16
2784 3523 2.279851 TTGTCTCGTGGCACGTGG 60.280 61.111 35.65 28.02 43.14 4.94
2785 3524 1.425267 TTGTTGTCTCGTGGCACGTG 61.425 55.000 35.65 32.70 43.14 4.49
2786 3525 0.531974 ATTGTTGTCTCGTGGCACGT 60.532 50.000 35.65 13.72 43.14 4.49
2787 3526 0.163788 GATTGTTGTCTCGTGGCACG 59.836 55.000 32.75 32.75 44.19 5.34
2788 3527 1.225855 TGATTGTTGTCTCGTGGCAC 58.774 50.000 7.79 7.79 0.00 5.01
2789 3528 1.872952 CTTGATTGTTGTCTCGTGGCA 59.127 47.619 0.00 0.00 0.00 4.92
2790 3529 1.400242 GCTTGATTGTTGTCTCGTGGC 60.400 52.381 0.00 0.00 0.00 5.01
2791 3530 1.197721 GGCTTGATTGTTGTCTCGTGG 59.802 52.381 0.00 0.00 0.00 4.94
2792 3531 2.146342 AGGCTTGATTGTTGTCTCGTG 58.854 47.619 0.00 0.00 0.00 4.35
2793 3532 2.417719 GAGGCTTGATTGTTGTCTCGT 58.582 47.619 0.00 0.00 0.00 4.18
2794 3533 1.734465 GGAGGCTTGATTGTTGTCTCG 59.266 52.381 0.00 0.00 0.00 4.04
2795 3534 1.734465 CGGAGGCTTGATTGTTGTCTC 59.266 52.381 0.00 0.00 0.00 3.36
2796 3535 1.611673 CCGGAGGCTTGATTGTTGTCT 60.612 52.381 0.00 0.00 46.14 3.41
2797 3536 0.804989 CCGGAGGCTTGATTGTTGTC 59.195 55.000 0.00 0.00 46.14 3.18
2798 3537 2.946947 CCGGAGGCTTGATTGTTGT 58.053 52.632 0.00 0.00 46.14 3.32
2811 3550 2.127345 CGCGCGAGTATACCGGAG 60.127 66.667 28.94 3.74 0.00 4.63
2812 3551 3.653009 CCGCGCGAGTATACCGGA 61.653 66.667 34.63 0.00 41.34 5.14
2813 3552 3.185082 TTCCGCGCGAGTATACCGG 62.185 63.158 34.63 12.06 40.25 5.28
2814 3553 1.724929 CTTCCGCGCGAGTATACCG 60.725 63.158 34.63 12.20 0.00 4.02
2815 3554 1.371389 CCTTCCGCGCGAGTATACC 60.371 63.158 34.63 0.00 0.00 2.73
2816 3555 1.371389 CCCTTCCGCGCGAGTATAC 60.371 63.158 34.63 0.00 0.00 1.47
2817 3556 1.512996 CTCCCTTCCGCGCGAGTATA 61.513 60.000 34.63 10.95 0.00 1.47
2818 3557 2.831742 TCCCTTCCGCGCGAGTAT 60.832 61.111 34.63 0.00 0.00 2.12
2819 3558 3.515286 CTCCCTTCCGCGCGAGTA 61.515 66.667 34.63 13.88 0.00 2.59
2825 3564 2.438434 ATTTGGCTCCCTTCCGCG 60.438 61.111 0.00 0.00 0.00 6.46
2826 3565 3.068729 GCATTTGGCTCCCTTCCGC 62.069 63.158 0.00 0.00 40.25 5.54
2827 3566 2.764314 CGCATTTGGCTCCCTTCCG 61.764 63.158 0.00 0.00 41.67 4.30
2828 3567 1.378514 TCGCATTTGGCTCCCTTCC 60.379 57.895 0.00 0.00 41.67 3.46
2829 3568 1.657751 GGTCGCATTTGGCTCCCTTC 61.658 60.000 0.00 0.00 41.67 3.46
2830 3569 1.678970 GGTCGCATTTGGCTCCCTT 60.679 57.895 0.00 0.00 41.67 3.95
2831 3570 2.044946 GGTCGCATTTGGCTCCCT 60.045 61.111 0.00 0.00 41.67 4.20
2832 3571 3.140814 GGGTCGCATTTGGCTCCC 61.141 66.667 0.00 0.00 43.42 4.30
2833 3572 2.044946 AGGGTCGCATTTGGCTCC 60.045 61.111 0.00 0.00 41.67 4.70
2834 3573 1.648467 GACAGGGTCGCATTTGGCTC 61.648 60.000 0.00 0.00 41.67 4.70
2835 3574 1.675641 GACAGGGTCGCATTTGGCT 60.676 57.895 0.00 0.00 41.67 4.75
2836 3575 2.700773 GGACAGGGTCGCATTTGGC 61.701 63.158 0.00 0.00 39.90 4.52
2837 3576 2.046285 GGGACAGGGTCGCATTTGG 61.046 63.158 8.35 0.00 43.51 3.28
2838 3577 3.590824 GGGACAGGGTCGCATTTG 58.409 61.111 8.35 0.00 43.51 2.32
2850 3589 6.632672 GCTCTAGGAACATATTTTCTGGGACA 60.633 42.308 1.82 0.00 0.00 4.02
2851 3590 5.760743 GCTCTAGGAACATATTTTCTGGGAC 59.239 44.000 1.82 0.00 0.00 4.46
2852 3591 5.453339 CGCTCTAGGAACATATTTTCTGGGA 60.453 44.000 1.82 0.00 0.00 4.37
2853 3592 4.752101 CGCTCTAGGAACATATTTTCTGGG 59.248 45.833 1.82 0.00 0.00 4.45
2854 3593 4.752101 CCGCTCTAGGAACATATTTTCTGG 59.248 45.833 1.82 0.00 0.00 3.86
2855 3594 4.212214 GCCGCTCTAGGAACATATTTTCTG 59.788 45.833 1.82 0.00 0.00 3.02
2856 3595 4.101741 AGCCGCTCTAGGAACATATTTTCT 59.898 41.667 1.82 0.00 0.00 2.52
2857 3596 4.381411 AGCCGCTCTAGGAACATATTTTC 58.619 43.478 0.00 0.00 0.00 2.29
2858 3597 4.101741 AGAGCCGCTCTAGGAACATATTTT 59.898 41.667 21.68 0.00 39.28 1.82
2859 3598 3.643792 AGAGCCGCTCTAGGAACATATTT 59.356 43.478 21.68 0.00 39.28 1.40
2860 3599 3.235200 AGAGCCGCTCTAGGAACATATT 58.765 45.455 21.68 0.00 39.28 1.28
2861 3600 2.883026 AGAGCCGCTCTAGGAACATAT 58.117 47.619 21.68 0.00 39.28 1.78
2862 3601 2.366640 AGAGCCGCTCTAGGAACATA 57.633 50.000 21.68 0.00 39.28 2.29
2863 3602 1.410882 GAAGAGCCGCTCTAGGAACAT 59.589 52.381 23.17 5.75 40.28 2.71
2864 3603 0.818296 GAAGAGCCGCTCTAGGAACA 59.182 55.000 23.17 0.00 40.28 3.18
2865 3604 0.818296 TGAAGAGCCGCTCTAGGAAC 59.182 55.000 23.17 12.36 40.28 3.62
2866 3605 1.478510 CTTGAAGAGCCGCTCTAGGAA 59.521 52.381 23.17 14.14 40.28 3.36
2867 3606 1.107114 CTTGAAGAGCCGCTCTAGGA 58.893 55.000 23.17 10.65 40.28 2.94
2868 3607 0.529555 GCTTGAAGAGCCGCTCTAGG 60.530 60.000 23.17 10.30 46.01 3.02
2869 3608 2.970576 GCTTGAAGAGCCGCTCTAG 58.029 57.895 23.17 17.22 46.01 2.43
2878 3617 1.066573 AGTCACGGATGGCTTGAAGAG 60.067 52.381 0.00 0.00 37.58 2.85
2879 3618 0.976641 AGTCACGGATGGCTTGAAGA 59.023 50.000 0.00 0.00 37.58 2.87
2880 3619 3.540211 AGTCACGGATGGCTTGAAG 57.460 52.632 0.00 0.00 37.58 3.02
2887 3626 1.811266 CTCGCCAAGTCACGGATGG 60.811 63.158 0.00 0.00 37.29 3.51
2888 3627 1.811266 CCTCGCCAAGTCACGGATG 60.811 63.158 0.00 0.00 0.00 3.51
2889 3628 2.579201 CCTCGCCAAGTCACGGAT 59.421 61.111 0.00 0.00 0.00 4.18
2890 3629 4.373116 GCCTCGCCAAGTCACGGA 62.373 66.667 0.00 0.00 0.00 4.69
2892 3631 4.717629 TCGCCTCGCCAAGTCACG 62.718 66.667 0.00 0.00 0.00 4.35
2893 3632 1.901650 CTTTCGCCTCGCCAAGTCAC 61.902 60.000 0.00 0.00 0.00 3.67
2894 3633 1.667830 CTTTCGCCTCGCCAAGTCA 60.668 57.895 0.00 0.00 0.00 3.41
2895 3634 3.028366 GCTTTCGCCTCGCCAAGTC 62.028 63.158 0.00 0.00 0.00 3.01
2896 3635 3.050275 GCTTTCGCCTCGCCAAGT 61.050 61.111 0.00 0.00 0.00 3.16
2897 3636 1.856265 AAAGCTTTCGCCTCGCCAAG 61.856 55.000 5.69 0.00 36.60 3.61
2898 3637 1.896660 AAAGCTTTCGCCTCGCCAA 60.897 52.632 5.69 0.00 36.60 4.52
2899 3638 2.281484 AAAGCTTTCGCCTCGCCA 60.281 55.556 5.69 0.00 36.60 5.69
2900 3639 2.176792 CAAAGCTTTCGCCTCGCC 59.823 61.111 9.23 0.00 36.60 5.54
2901 3640 2.502726 GCAAAGCTTTCGCCTCGC 60.503 61.111 9.23 4.88 36.60 5.03
2902 3641 2.176792 GGCAAAGCTTTCGCCTCG 59.823 61.111 29.76 13.95 42.78 4.63
2903 3642 1.081175 GTGGCAAAGCTTTCGCCTC 60.081 57.895 33.16 29.12 46.39 4.70
2904 3643 1.391157 TTGTGGCAAAGCTTTCGCCT 61.391 50.000 33.16 7.77 46.39 5.52
2905 3644 1.067250 TTGTGGCAAAGCTTTCGCC 59.933 52.632 30.08 30.08 46.43 5.54
2906 3645 1.215014 GGTTGTGGCAAAGCTTTCGC 61.215 55.000 9.23 15.66 0.00 4.70
2907 3646 0.597377 GGGTTGTGGCAAAGCTTTCG 60.597 55.000 9.23 6.50 0.00 3.46
2908 3647 0.249868 GGGGTTGTGGCAAAGCTTTC 60.250 55.000 9.23 4.47 0.00 2.62
2909 3648 0.690744 AGGGGTTGTGGCAAAGCTTT 60.691 50.000 5.69 5.69 0.00 3.51
2910 3649 1.075301 AGGGGTTGTGGCAAAGCTT 60.075 52.632 0.00 0.00 0.00 3.74
2911 3650 1.833934 CAGGGGTTGTGGCAAAGCT 60.834 57.895 0.00 0.00 0.00 3.74
2912 3651 2.736531 CAGGGGTTGTGGCAAAGC 59.263 61.111 0.00 0.00 0.00 3.51
2913 3652 2.736531 GCAGGGGTTGTGGCAAAG 59.263 61.111 0.00 0.00 0.00 2.77
2914 3653 3.222855 CGCAGGGGTTGTGGCAAA 61.223 61.111 0.00 0.00 33.58 3.68
2931 3670 2.975799 TTGAGTTTGCCGGCGTCC 60.976 61.111 23.90 11.64 0.00 4.79
2932 3671 2.171489 GAGTTGAGTTTGCCGGCGTC 62.171 60.000 23.90 15.93 0.00 5.19
2933 3672 2.203153 AGTTGAGTTTGCCGGCGT 60.203 55.556 23.90 5.96 0.00 5.68
2934 3673 2.556287 GAGTTGAGTTTGCCGGCG 59.444 61.111 23.90 0.00 0.00 6.46
2935 3674 1.578206 GAGGAGTTGAGTTTGCCGGC 61.578 60.000 22.73 22.73 0.00 6.13
2936 3675 1.291877 CGAGGAGTTGAGTTTGCCGG 61.292 60.000 0.00 0.00 0.00 6.13
2937 3676 1.291877 CCGAGGAGTTGAGTTTGCCG 61.292 60.000 0.00 0.00 0.00 5.69
2938 3677 1.578206 GCCGAGGAGTTGAGTTTGCC 61.578 60.000 0.00 0.00 0.00 4.52
2939 3678 0.884704 TGCCGAGGAGTTGAGTTTGC 60.885 55.000 0.00 0.00 0.00 3.68
2940 3679 1.734465 GATGCCGAGGAGTTGAGTTTG 59.266 52.381 0.00 0.00 0.00 2.93
2941 3680 1.339151 GGATGCCGAGGAGTTGAGTTT 60.339 52.381 0.00 0.00 0.00 2.66
2942 3681 0.250513 GGATGCCGAGGAGTTGAGTT 59.749 55.000 0.00 0.00 0.00 3.01
2943 3682 0.904865 TGGATGCCGAGGAGTTGAGT 60.905 55.000 0.00 0.00 0.00 3.41
2944 3683 0.250234 TTGGATGCCGAGGAGTTGAG 59.750 55.000 0.00 0.00 0.00 3.02
2945 3684 0.250234 CTTGGATGCCGAGGAGTTGA 59.750 55.000 0.00 0.00 31.55 3.18
2946 3685 2.772739 CTTGGATGCCGAGGAGTTG 58.227 57.895 0.00 0.00 31.55 3.16
2952 3691 0.877649 CGTCATCCTTGGATGCCGAG 60.878 60.000 23.36 11.40 36.21 4.63
2953 3692 1.143838 CGTCATCCTTGGATGCCGA 59.856 57.895 23.36 6.37 36.21 5.54
2954 3693 0.461870 TTCGTCATCCTTGGATGCCG 60.462 55.000 22.21 22.21 35.57 5.69
2955 3694 1.303309 CTTCGTCATCCTTGGATGCC 58.697 55.000 21.36 11.91 32.87 4.40
2956 3695 1.303309 CCTTCGTCATCCTTGGATGC 58.697 55.000 21.36 15.83 32.87 3.91
2957 3696 1.303309 GCCTTCGTCATCCTTGGATG 58.697 55.000 20.42 20.42 0.00 3.51
2958 3697 0.911769 TGCCTTCGTCATCCTTGGAT 59.088 50.000 0.00 0.00 0.00 3.41
2959 3698 0.911769 ATGCCTTCGTCATCCTTGGA 59.088 50.000 0.00 0.00 0.00 3.53
2960 3699 2.620251 TATGCCTTCGTCATCCTTGG 57.380 50.000 0.00 0.00 0.00 3.61
2961 3700 4.692625 CCTATTATGCCTTCGTCATCCTTG 59.307 45.833 0.00 0.00 0.00 3.61
2962 3701 4.593206 TCCTATTATGCCTTCGTCATCCTT 59.407 41.667 0.00 0.00 0.00 3.36
2963 3702 4.160329 TCCTATTATGCCTTCGTCATCCT 58.840 43.478 0.00 0.00 0.00 3.24
2964 3703 4.499183 CTCCTATTATGCCTTCGTCATCC 58.501 47.826 0.00 0.00 0.00 3.51
2965 3704 4.499183 CCTCCTATTATGCCTTCGTCATC 58.501 47.826 0.00 0.00 0.00 2.92
2966 3705 3.307059 GCCTCCTATTATGCCTTCGTCAT 60.307 47.826 0.00 0.00 0.00 3.06
2967 3706 2.037251 GCCTCCTATTATGCCTTCGTCA 59.963 50.000 0.00 0.00 0.00 4.35
2968 3707 2.300437 AGCCTCCTATTATGCCTTCGTC 59.700 50.000 0.00 0.00 0.00 4.20
2969 3708 2.330216 AGCCTCCTATTATGCCTTCGT 58.670 47.619 0.00 0.00 0.00 3.85
2970 3709 3.070018 CAAGCCTCCTATTATGCCTTCG 58.930 50.000 0.00 0.00 0.00 3.79
2971 3710 3.416156 CCAAGCCTCCTATTATGCCTTC 58.584 50.000 0.00 0.00 0.00 3.46
2972 3711 2.489802 GCCAAGCCTCCTATTATGCCTT 60.490 50.000 0.00 0.00 0.00 4.35
2973 3712 1.074566 GCCAAGCCTCCTATTATGCCT 59.925 52.381 0.00 0.00 0.00 4.75
2974 3713 1.539157 GCCAAGCCTCCTATTATGCC 58.461 55.000 0.00 0.00 0.00 4.40
2975 3714 1.160137 CGCCAAGCCTCCTATTATGC 58.840 55.000 0.00 0.00 0.00 3.14
2976 3715 1.072331 ACCGCCAAGCCTCCTATTATG 59.928 52.381 0.00 0.00 0.00 1.90
2977 3716 1.348036 GACCGCCAAGCCTCCTATTAT 59.652 52.381 0.00 0.00 0.00 1.28
2978 3717 0.756903 GACCGCCAAGCCTCCTATTA 59.243 55.000 0.00 0.00 0.00 0.98
2979 3718 1.527370 GACCGCCAAGCCTCCTATT 59.473 57.895 0.00 0.00 0.00 1.73
2980 3719 2.797278 CGACCGCCAAGCCTCCTAT 61.797 63.158 0.00 0.00 0.00 2.57
2981 3720 3.458163 CGACCGCCAAGCCTCCTA 61.458 66.667 0.00 0.00 0.00 2.94
2983 3722 4.388499 TTCGACCGCCAAGCCTCC 62.388 66.667 0.00 0.00 0.00 4.30
2984 3723 2.781595 TTCTTCGACCGCCAAGCCTC 62.782 60.000 0.00 0.00 0.00 4.70
2985 3724 2.788191 CTTCTTCGACCGCCAAGCCT 62.788 60.000 0.00 0.00 0.00 4.58
2986 3725 2.358247 TTCTTCGACCGCCAAGCC 60.358 61.111 0.00 0.00 0.00 4.35
2987 3726 3.028366 GCTTCTTCGACCGCCAAGC 62.028 63.158 0.00 0.00 33.21 4.01
2988 3727 1.021390 ATGCTTCTTCGACCGCCAAG 61.021 55.000 0.00 0.00 0.00 3.61
2989 3728 0.248012 TATGCTTCTTCGACCGCCAA 59.752 50.000 0.00 0.00 0.00 4.52
2990 3729 0.459585 GTATGCTTCTTCGACCGCCA 60.460 55.000 0.00 0.00 0.00 5.69
2991 3730 0.179108 AGTATGCTTCTTCGACCGCC 60.179 55.000 0.00 0.00 0.00 6.13
2992 3731 1.201343 GAGTATGCTTCTTCGACCGC 58.799 55.000 0.00 0.00 0.00 5.68
2993 3732 1.467875 CGAGTATGCTTCTTCGACCG 58.532 55.000 0.00 0.00 0.00 4.79
2994 3733 1.841450 CCGAGTATGCTTCTTCGACC 58.159 55.000 7.09 0.00 0.00 4.79
2995 3734 1.201343 GCCGAGTATGCTTCTTCGAC 58.799 55.000 7.09 0.00 0.00 4.20
2996 3735 0.102481 GGCCGAGTATGCTTCTTCGA 59.898 55.000 0.00 0.00 0.00 3.71
2997 3736 0.876342 GGGCCGAGTATGCTTCTTCG 60.876 60.000 0.00 0.00 0.00 3.79
2998 3737 0.178068 TGGGCCGAGTATGCTTCTTC 59.822 55.000 0.00 0.00 0.00 2.87
2999 3738 0.839946 ATGGGCCGAGTATGCTTCTT 59.160 50.000 0.00 0.00 0.00 2.52
3000 3739 0.107456 CATGGGCCGAGTATGCTTCT 59.893 55.000 0.00 0.00 0.00 2.85
3001 3740 0.106708 TCATGGGCCGAGTATGCTTC 59.893 55.000 0.00 0.00 0.00 3.86
3002 3741 0.546122 TTCATGGGCCGAGTATGCTT 59.454 50.000 0.00 0.00 0.00 3.91
3003 3742 0.107456 CTTCATGGGCCGAGTATGCT 59.893 55.000 0.00 0.00 0.00 3.79
3004 3743 0.179045 ACTTCATGGGCCGAGTATGC 60.179 55.000 0.00 0.00 0.00 3.14
3005 3744 3.469008 TTACTTCATGGGCCGAGTATG 57.531 47.619 0.00 0.00 0.00 2.39
3006 3745 3.244561 CCATTACTTCATGGGCCGAGTAT 60.245 47.826 0.00 0.00 40.29 2.12
3007 3746 2.104111 CCATTACTTCATGGGCCGAGTA 59.896 50.000 0.00 1.89 40.29 2.59
3008 3747 1.134098 CCATTACTTCATGGGCCGAGT 60.134 52.381 0.00 2.92 40.29 4.18
3009 3748 1.597742 CCATTACTTCATGGGCCGAG 58.402 55.000 0.00 0.00 40.29 4.63
3010 3749 0.465460 GCCATTACTTCATGGGCCGA 60.465 55.000 0.00 0.00 43.76 5.54
3011 3750 0.751277 TGCCATTACTTCATGGGCCG 60.751 55.000 0.00 0.00 43.76 6.13
3012 3751 1.035139 CTGCCATTACTTCATGGGCC 58.965 55.000 0.00 0.00 43.76 5.80
3013 3752 1.767759 ACTGCCATTACTTCATGGGC 58.232 50.000 1.96 0.00 43.76 5.36
3014 3753 5.380043 AGATAACTGCCATTACTTCATGGG 58.620 41.667 1.96 0.00 43.76 4.00
3015 3754 6.017605 GTGAGATAACTGCCATTACTTCATGG 60.018 42.308 0.00 0.00 46.04 3.66
3016 3755 6.017605 GGTGAGATAACTGCCATTACTTCATG 60.018 42.308 0.00 0.00 0.00 3.07
3017 3756 6.058183 GGTGAGATAACTGCCATTACTTCAT 58.942 40.000 0.00 0.00 0.00 2.57
3018 3757 5.045942 TGGTGAGATAACTGCCATTACTTCA 60.046 40.000 0.00 0.00 0.00 3.02
3019 3758 5.428253 TGGTGAGATAACTGCCATTACTTC 58.572 41.667 0.00 0.00 0.00 3.01
3020 3759 5.435686 TGGTGAGATAACTGCCATTACTT 57.564 39.130 0.00 0.00 0.00 2.24
3021 3760 5.615289 GATGGTGAGATAACTGCCATTACT 58.385 41.667 7.00 0.00 38.05 2.24
3022 3761 4.449068 CGATGGTGAGATAACTGCCATTAC 59.551 45.833 7.00 0.00 38.05 1.89
3023 3762 4.343814 TCGATGGTGAGATAACTGCCATTA 59.656 41.667 7.00 0.00 38.05 1.90
3024 3763 3.134623 TCGATGGTGAGATAACTGCCATT 59.865 43.478 7.00 0.00 38.05 3.16
3025 3764 2.700371 TCGATGGTGAGATAACTGCCAT 59.300 45.455 5.67 5.67 39.48 4.40
3026 3765 2.107366 TCGATGGTGAGATAACTGCCA 58.893 47.619 0.00 0.00 34.18 4.92
3027 3766 2.474816 GTCGATGGTGAGATAACTGCC 58.525 52.381 0.00 0.00 0.00 4.85
3028 3767 2.474816 GGTCGATGGTGAGATAACTGC 58.525 52.381 0.00 0.00 0.00 4.40
3029 3768 2.357952 TCGGTCGATGGTGAGATAACTG 59.642 50.000 0.00 0.00 0.00 3.16
3030 3769 2.619177 CTCGGTCGATGGTGAGATAACT 59.381 50.000 0.00 0.00 0.00 2.24
3031 3770 2.859032 GCTCGGTCGATGGTGAGATAAC 60.859 54.545 9.45 0.00 0.00 1.89
3032 3771 1.337071 GCTCGGTCGATGGTGAGATAA 59.663 52.381 9.45 0.00 0.00 1.75
3033 3772 0.952280 GCTCGGTCGATGGTGAGATA 59.048 55.000 9.45 0.00 0.00 1.98
3034 3773 1.736586 GCTCGGTCGATGGTGAGAT 59.263 57.895 9.45 0.00 0.00 2.75
3035 3774 2.415608 GGCTCGGTCGATGGTGAGA 61.416 63.158 9.45 0.00 0.00 3.27
3036 3775 2.105128 GGCTCGGTCGATGGTGAG 59.895 66.667 0.00 0.00 0.00 3.51
3037 3776 3.458163 GGGCTCGGTCGATGGTGA 61.458 66.667 0.00 0.00 0.00 4.02
3038 3777 2.907897 GAAGGGCTCGGTCGATGGTG 62.908 65.000 0.00 0.00 0.00 4.17
3039 3778 2.683933 AAGGGCTCGGTCGATGGT 60.684 61.111 0.00 0.00 0.00 3.55
3040 3779 2.107141 GAAGGGCTCGGTCGATGG 59.893 66.667 0.00 0.00 0.00 3.51
3041 3780 2.107141 GGAAGGGCTCGGTCGATG 59.893 66.667 0.00 0.00 0.00 3.84
3042 3781 2.042843 AGGAAGGGCTCGGTCGAT 60.043 61.111 0.00 0.00 0.00 3.59
3043 3782 2.754658 GAGGAAGGGCTCGGTCGA 60.755 66.667 0.00 0.00 0.00 4.20
3044 3783 4.194720 CGAGGAAGGGCTCGGTCG 62.195 72.222 0.00 0.00 39.18 4.79
3048 3787 0.969894 AATATCCGAGGAAGGGCTCG 59.030 55.000 0.00 0.00 42.10 5.03
3049 3788 3.579151 AGTAAATATCCGAGGAAGGGCTC 59.421 47.826 0.00 0.00 0.00 4.70
3050 3789 3.579151 GAGTAAATATCCGAGGAAGGGCT 59.421 47.826 0.00 0.00 0.00 5.19
3051 3790 3.306849 GGAGTAAATATCCGAGGAAGGGC 60.307 52.174 0.00 0.00 0.00 5.19
3052 3791 4.538746 GGAGTAAATATCCGAGGAAGGG 57.461 50.000 0.00 0.00 0.00 3.95
3061 3800 2.475487 GCTCGTTGCGGAGTAAATATCC 59.525 50.000 1.90 0.00 36.41 2.59
3062 3801 3.772522 GCTCGTTGCGGAGTAAATATC 57.227 47.619 1.90 0.00 36.41 1.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.