Multiple sequence alignment - TraesCS1D01G095600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G095600 chr1D 100.000 3579 0 0 1 3579 80841725 80845303 0.000000e+00 6610.0
1 TraesCS1D01G095600 chr1D 81.399 1715 273 34 763 2465 344284176 344285856 0.000000e+00 1358.0
2 TraesCS1D01G095600 chr1D 98.802 167 2 0 2952 3118 434239617 434239783 7.510000e-77 298.0
3 TraesCS1D01G095600 chr1D 90.722 97 4 2 2506 2602 434239516 434239425 1.350000e-24 124.0
4 TraesCS1D01G095600 chr1A 94.518 1824 80 4 676 2484 99318577 99320395 0.000000e+00 2796.0
5 TraesCS1D01G095600 chr1A 80.718 1644 271 23 830 2465 444421644 444420039 0.000000e+00 1238.0
6 TraesCS1D01G095600 chr1A 94.795 365 16 1 297 658 99312581 99312945 1.870000e-157 566.0
7 TraesCS1D01G095600 chr1A 93.831 308 11 2 1 300 99312193 99312500 1.170000e-124 457.0
8 TraesCS1D01G095600 chr7D 83.333 1746 242 32 739 2468 84422149 84420437 0.000000e+00 1567.0
9 TraesCS1D01G095600 chr7D 83.109 1711 253 23 768 2465 193935063 193936750 0.000000e+00 1526.0
10 TraesCS1D01G095600 chr7D 79.473 1062 190 18 1409 2463 399834031 399835071 0.000000e+00 728.0
11 TraesCS1D01G095600 chr7D 92.965 199 13 1 3381 3579 472097300 472097103 4.520000e-74 289.0
12 TraesCS1D01G095600 chr7D 88.462 78 7 2 3501 3578 382728236 382728311 3.800000e-15 93.5
13 TraesCS1D01G095600 chr7A 83.421 1713 244 27 768 2465 203525571 203527258 0.000000e+00 1554.0
14 TraesCS1D01G095600 chr7A 83.130 1719 239 31 768 2463 85724283 85725973 0.000000e+00 1520.0
15 TraesCS1D01G095600 chr7A 79.586 1063 189 18 1409 2464 457684149 457685190 0.000000e+00 736.0
16 TraesCS1D01G095600 chrUn 83.130 1719 239 31 768 2463 82637353 82635663 0.000000e+00 1520.0
17 TraesCS1D01G095600 chr7B 83.042 1716 250 27 768 2468 34168300 34169989 0.000000e+00 1519.0
18 TraesCS1D01G095600 chr7B 82.837 1713 252 29 769 2465 157687836 157689522 0.000000e+00 1496.0
19 TraesCS1D01G095600 chr7B 82.192 73 12 1 3506 3578 68201363 68201292 1.070000e-05 62.1
20 TraesCS1D01G095600 chr5B 80.000 1695 298 28 786 2468 513711536 513713201 0.000000e+00 1214.0
21 TraesCS1D01G095600 chr5B 91.282 195 16 1 3383 3577 536521543 536521350 7.620000e-67 265.0
22 TraesCS1D01G095600 chr5B 88.112 143 16 1 3380 3522 516546174 516546033 6.150000e-38 169.0
23 TraesCS1D01G095600 chr3A 87.446 462 24 12 2505 2938 45585666 45586121 5.330000e-138 501.0
24 TraesCS1D01G095600 chr3A 86.592 179 9 4 2940 3118 45586255 45586418 2.190000e-42 183.0
25 TraesCS1D01G095600 chr4D 83.628 452 52 14 2685 3118 497148626 497148179 4.300000e-109 405.0
26 TraesCS1D01G095600 chr3D 93.467 199 12 1 3381 3579 494237199 494237002 9.720000e-76 294.0
27 TraesCS1D01G095600 chr3D 91.960 199 15 1 3381 3579 86206377 86206574 9.790000e-71 278.0
28 TraesCS1D01G095600 chr2D 93.467 199 12 1 3381 3579 353065801 353065604 9.720000e-76 294.0
29 TraesCS1D01G095600 chr6D 92.547 161 11 1 3381 3541 18495256 18495097 2.780000e-56 230.0
30 TraesCS1D01G095600 chr4A 88.194 144 14 3 3380 3522 352631742 352631601 6.150000e-38 169.0
31 TraesCS1D01G095600 chr5D 88.112 143 14 3 3380 3521 396950096 396949956 2.210000e-37 167.0
32 TraesCS1D01G095600 chr6B 100.000 29 0 0 3550 3578 643416817 643416845 2.000000e-03 54.7
33 TraesCS1D01G095600 chr1B 100.000 29 0 0 3550 3578 354930469 354930497 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G095600 chr1D 80841725 80845303 3578 False 6610.0 6610 100.000 1 3579 1 chr1D.!!$F1 3578
1 TraesCS1D01G095600 chr1D 344284176 344285856 1680 False 1358.0 1358 81.399 763 2465 1 chr1D.!!$F2 1702
2 TraesCS1D01G095600 chr1A 99318577 99320395 1818 False 2796.0 2796 94.518 676 2484 1 chr1A.!!$F1 1808
3 TraesCS1D01G095600 chr1A 444420039 444421644 1605 True 1238.0 1238 80.718 830 2465 1 chr1A.!!$R1 1635
4 TraesCS1D01G095600 chr1A 99312193 99312945 752 False 511.5 566 94.313 1 658 2 chr1A.!!$F2 657
5 TraesCS1D01G095600 chr7D 84420437 84422149 1712 True 1567.0 1567 83.333 739 2468 1 chr7D.!!$R1 1729
6 TraesCS1D01G095600 chr7D 193935063 193936750 1687 False 1526.0 1526 83.109 768 2465 1 chr7D.!!$F1 1697
7 TraesCS1D01G095600 chr7D 399834031 399835071 1040 False 728.0 728 79.473 1409 2463 1 chr7D.!!$F3 1054
8 TraesCS1D01G095600 chr7A 203525571 203527258 1687 False 1554.0 1554 83.421 768 2465 1 chr7A.!!$F2 1697
9 TraesCS1D01G095600 chr7A 85724283 85725973 1690 False 1520.0 1520 83.130 768 2463 1 chr7A.!!$F1 1695
10 TraesCS1D01G095600 chr7A 457684149 457685190 1041 False 736.0 736 79.586 1409 2464 1 chr7A.!!$F3 1055
11 TraesCS1D01G095600 chrUn 82635663 82637353 1690 True 1520.0 1520 83.130 768 2463 1 chrUn.!!$R1 1695
12 TraesCS1D01G095600 chr7B 34168300 34169989 1689 False 1519.0 1519 83.042 768 2468 1 chr7B.!!$F1 1700
13 TraesCS1D01G095600 chr7B 157687836 157689522 1686 False 1496.0 1496 82.837 769 2465 1 chr7B.!!$F2 1696
14 TraesCS1D01G095600 chr5B 513711536 513713201 1665 False 1214.0 1214 80.000 786 2468 1 chr5B.!!$F1 1682
15 TraesCS1D01G095600 chr3A 45585666 45586418 752 False 342.0 501 87.019 2505 3118 2 chr3A.!!$F1 613

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
666 762 0.034089 ACAAAGATAGGTGGCTGGCC 60.034 55.0 4.43 4.43 0.0 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2601 2729 0.106819 CAGGGCATCAGGGAAGAAGG 60.107 60.0 0.0 0.0 0.0 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 1.565759 AGTGCTATCCTGGATTGCCAA 59.434 47.619 30.85 16.80 45.41 4.52
55 56 2.487762 ACTGGCGTGTATTGAACATTGG 59.512 45.455 0.00 0.00 41.10 3.16
67 68 2.040278 TGAACATTGGGGAGAGGAGTTG 59.960 50.000 0.00 0.00 0.00 3.16
92 93 4.361451 AAATTCTGATGCAAAGGCTACG 57.639 40.909 0.00 0.00 41.91 3.51
120 121 1.952296 CTATTGCTGGCATCTTGGGAC 59.048 52.381 0.00 0.00 0.00 4.46
138 139 2.233676 GGACTTGGGGGCAAAACTATTG 59.766 50.000 0.00 0.00 0.00 1.90
149 150 4.213270 GGCAAAACTATTGGAAACTTTGGC 59.787 41.667 3.62 3.62 40.55 4.52
186 187 7.094162 GCCTGCAAGTACATAGAGAGATATACA 60.094 40.741 0.00 0.00 0.00 2.29
187 188 8.458052 CCTGCAAGTACATAGAGAGATATACAG 58.542 40.741 0.00 0.00 0.00 2.74
206 211 2.160417 CAGGTGGAGCGATTTCTTTGTC 59.840 50.000 0.00 0.00 0.00 3.18
309 402 7.987458 ACTGACAAACCTTAGTATACATCATGG 59.013 37.037 5.50 4.44 0.00 3.66
345 438 5.419542 TGGTTGAGAAGAAGATATTCGTGG 58.580 41.667 0.00 0.00 0.00 4.94
359 452 8.239038 AGATATTCGTGGAGAAGTTTGAGATA 57.761 34.615 0.00 0.00 42.92 1.98
389 482 1.940613 GCGACCTGTACCATCCATTTC 59.059 52.381 0.00 0.00 0.00 2.17
444 537 1.593006 CATACGGGCATCGAACAGAAC 59.407 52.381 5.71 0.00 42.43 3.01
469 562 7.337942 ACTGAACTGAAGAAACTCATGTCTTTT 59.662 33.333 0.00 0.00 34.23 2.27
477 570 9.482627 GAAGAAACTCATGTCTTTTTCTCTAGA 57.517 33.333 11.37 0.00 37.32 2.43
512 608 0.746563 CTCTCTCCTTCCTCGCGTCT 60.747 60.000 5.77 0.00 0.00 4.18
575 671 3.501396 CCATCGTCGGCTGCAATT 58.499 55.556 0.50 0.00 0.00 2.32
588 684 3.306919 GGCTGCAATTTGATTGGGAGAAA 60.307 43.478 0.50 0.00 40.57 2.52
618 714 3.981211 ACTGTGCACAAATCATTTGGTC 58.019 40.909 21.98 6.07 44.81 4.02
621 717 3.059166 GTGCACAAATCATTTGGTCCAC 58.941 45.455 13.17 12.94 44.81 4.02
658 754 4.080863 CCACCAAGCTAGACAAAGATAGGT 60.081 45.833 0.00 0.00 0.00 3.08
659 755 4.872691 CACCAAGCTAGACAAAGATAGGTG 59.127 45.833 0.00 0.00 37.12 4.00
660 756 4.080863 ACCAAGCTAGACAAAGATAGGTGG 60.081 45.833 0.00 0.00 30.51 4.61
661 757 3.828875 AGCTAGACAAAGATAGGTGGC 57.171 47.619 0.00 0.00 0.00 5.01
662 758 3.379452 AGCTAGACAAAGATAGGTGGCT 58.621 45.455 0.00 0.00 36.86 4.75
663 759 3.133721 AGCTAGACAAAGATAGGTGGCTG 59.866 47.826 0.00 0.00 34.10 4.85
664 760 3.742640 GCTAGACAAAGATAGGTGGCTGG 60.743 52.174 0.00 0.00 34.10 4.85
665 761 1.065126 AGACAAAGATAGGTGGCTGGC 60.065 52.381 0.00 0.00 29.64 4.85
666 762 0.034089 ACAAAGATAGGTGGCTGGCC 60.034 55.000 4.43 4.43 0.00 5.36
667 763 0.753111 CAAAGATAGGTGGCTGGCCC 60.753 60.000 9.28 0.00 34.56 5.80
668 764 1.214305 AAAGATAGGTGGCTGGCCCA 61.214 55.000 9.28 0.00 42.79 5.36
686 782 2.173519 CCATTCAGGCATTCACCACTT 58.826 47.619 0.00 0.00 0.00 3.16
687 783 2.094390 CCATTCAGGCATTCACCACTTG 60.094 50.000 0.00 0.00 0.00 3.16
701 797 4.035792 TCACCACTTGTTCCACAAATTACG 59.964 41.667 0.00 0.00 37.69 3.18
733 835 0.610232 AGCAATGGAAGGTGGCACTC 60.610 55.000 18.45 8.00 0.00 3.51
741 843 3.730761 GGTGGCACTCGCTTGCTG 61.731 66.667 18.45 0.00 42.56 4.41
756 858 2.960688 GCTGGCGGTTCTCCTCCTT 61.961 63.158 0.00 0.00 39.22 3.36
864 966 1.008652 CGTCACCAACACGTACGGA 60.009 57.895 21.06 1.85 32.41 4.69
977 1079 1.372128 CCAAACGCAAGCTCAAGGC 60.372 57.895 0.00 0.00 45.62 4.35
1169 1281 4.731612 CTGTCGCTGCCGCACTCT 62.732 66.667 0.00 0.00 35.30 3.24
1393 1510 4.813526 CCTCGGCGTCGTGTCTCG 62.814 72.222 10.18 0.00 41.41 4.04
1611 1728 1.893801 ACGATCTGTTCTTCTTCCGGT 59.106 47.619 0.00 0.00 0.00 5.28
1612 1729 2.094649 ACGATCTGTTCTTCTTCCGGTC 60.095 50.000 0.00 0.00 0.00 4.79
1613 1730 2.735762 CGATCTGTTCTTCTTCCGGTCC 60.736 54.545 0.00 0.00 0.00 4.46
1614 1731 1.712056 TCTGTTCTTCTTCCGGTCCA 58.288 50.000 0.00 0.00 0.00 4.02
1615 1732 1.343465 TCTGTTCTTCTTCCGGTCCAC 59.657 52.381 0.00 0.00 0.00 4.02
1750 1873 2.356780 GCAGGGGTACGGCTACACT 61.357 63.158 0.00 0.00 37.31 3.55
1900 2023 2.185387 GGCCCCTTCTACTACAACTCA 58.815 52.381 0.00 0.00 0.00 3.41
2024 2147 2.202743 GCGTGCTCATCCGCTACA 60.203 61.111 0.00 0.00 46.08 2.74
2284 2410 3.690108 GAAGTACGACCCCGACGGC 62.690 68.421 8.86 0.00 39.50 5.68
2352 2478 4.530857 CCCCAGCATCGTCGGGAC 62.531 72.222 0.00 0.00 43.21 4.46
2422 2548 1.376812 GCCGGAACAGGGGTACTTG 60.377 63.158 5.05 0.00 0.00 3.16
2431 2557 4.029809 GGGTACTTGTGCCGGCCT 62.030 66.667 26.77 3.25 0.00 5.19
2465 2591 1.743252 GAGGCCAGAGTTTGCTCCG 60.743 63.158 5.01 0.00 42.59 4.63
2479 2605 1.565591 CTCCGTTTTACGCGCACAA 59.434 52.632 5.73 0.00 40.91 3.33
2484 2610 1.323791 GTTTTACGCGCACAATGACC 58.676 50.000 5.73 0.00 0.00 4.02
2485 2611 1.069500 GTTTTACGCGCACAATGACCT 60.069 47.619 5.73 0.00 0.00 3.85
2486 2612 0.793861 TTTACGCGCACAATGACCTC 59.206 50.000 5.73 0.00 0.00 3.85
2487 2613 1.017177 TTACGCGCACAATGACCTCC 61.017 55.000 5.73 0.00 0.00 4.30
2488 2614 3.853330 CGCGCACAATGACCTCCG 61.853 66.667 8.75 0.00 0.00 4.63
2489 2615 3.499737 GCGCACAATGACCTCCGG 61.500 66.667 0.30 0.00 0.00 5.14
2490 2616 2.047274 CGCACAATGACCTCCGGT 60.047 61.111 0.00 0.00 39.44 5.28
2491 2617 1.216977 CGCACAATGACCTCCGGTA 59.783 57.895 0.00 0.00 35.25 4.02
2492 2618 1.082117 CGCACAATGACCTCCGGTAC 61.082 60.000 0.00 0.00 35.25 3.34
2493 2619 0.036765 GCACAATGACCTCCGGTACA 60.037 55.000 0.00 0.00 35.25 2.90
2494 2620 1.406887 GCACAATGACCTCCGGTACAT 60.407 52.381 0.00 0.39 35.25 2.29
2495 2621 2.159014 GCACAATGACCTCCGGTACATA 60.159 50.000 0.00 0.00 35.25 2.29
2496 2622 3.680475 GCACAATGACCTCCGGTACATAA 60.680 47.826 0.00 0.00 35.25 1.90
2497 2623 4.703897 CACAATGACCTCCGGTACATAAT 58.296 43.478 0.00 0.00 35.25 1.28
2498 2624 4.750098 CACAATGACCTCCGGTACATAATC 59.250 45.833 0.00 0.00 35.25 1.75
2499 2625 4.202326 ACAATGACCTCCGGTACATAATCC 60.202 45.833 0.00 0.00 35.25 3.01
2500 2626 3.323774 TGACCTCCGGTACATAATCCT 57.676 47.619 0.00 0.00 35.25 3.24
2501 2627 4.458256 TGACCTCCGGTACATAATCCTA 57.542 45.455 0.00 0.00 35.25 2.94
2502 2628 4.147321 TGACCTCCGGTACATAATCCTAC 58.853 47.826 0.00 0.00 35.25 3.18
2503 2629 3.152341 ACCTCCGGTACATAATCCTACG 58.848 50.000 0.00 0.00 32.11 3.51
2504 2630 2.490903 CCTCCGGTACATAATCCTACGG 59.509 54.545 0.00 0.00 41.06 4.02
2505 2631 2.490903 CTCCGGTACATAATCCTACGGG 59.509 54.545 0.00 0.00 40.19 5.28
2506 2632 1.547372 CCGGTACATAATCCTACGGGG 59.453 57.143 0.00 0.00 36.45 5.73
2522 2648 4.332428 ACGGGGAAAAGAATCCTATACG 57.668 45.455 0.00 0.00 39.57 3.06
2523 2649 3.962718 ACGGGGAAAAGAATCCTATACGA 59.037 43.478 0.00 0.00 39.57 3.43
2524 2650 4.202192 ACGGGGAAAAGAATCCTATACGAC 60.202 45.833 0.00 0.00 39.57 4.34
2525 2651 4.202182 CGGGGAAAAGAATCCTATACGACA 60.202 45.833 0.00 0.00 39.57 4.35
2545 2671 0.808847 GACCGGGTCGTATGCTTTCC 60.809 60.000 12.12 0.00 0.00 3.13
2601 2729 4.205792 GCAATGCGAATCTTAATGCACTTC 59.794 41.667 0.00 0.00 40.61 3.01
2622 2750 2.123982 CTTCCCTGATGCCCTGCC 60.124 66.667 0.00 0.00 0.00 4.85
2623 2751 2.940467 TTCCCTGATGCCCTGCCA 60.940 61.111 0.00 0.00 0.00 4.92
2630 2758 1.340248 CTGATGCCCTGCCATGAATTC 59.660 52.381 0.00 0.00 0.00 2.17
2638 2766 2.415893 CCTGCCATGAATTCAAACGGAC 60.416 50.000 20.39 13.76 0.00 4.79
2653 2781 1.224592 GGACCATCGTGGCCATTCT 59.775 57.895 9.72 0.00 42.67 2.40
2675 2803 4.160329 TCCTTACAGTTCAGATCTGGTGT 58.840 43.478 22.42 22.16 37.25 4.16
2678 2806 1.625818 ACAGTTCAGATCTGGTGTCCC 59.374 52.381 22.42 4.78 37.25 4.46
2688 2816 4.368543 GGTGTCCCGACCGTCACC 62.369 72.222 0.00 10.77 42.40 4.02
2711 2839 4.127040 CGAGCTGCACCTCTCGCT 62.127 66.667 13.15 5.57 44.30 4.93
2750 2878 2.048127 GTCGCGGCAGAACTCCTT 60.048 61.111 5.47 0.00 0.00 3.36
2754 2882 2.383527 GCGGCAGAACTCCTTGACG 61.384 63.158 0.00 0.00 0.00 4.35
2775 2903 3.422303 GCACAATCACGCGGCTCA 61.422 61.111 12.47 0.00 0.00 4.26
2779 2907 4.778143 AATCACGCGGCTCACCCC 62.778 66.667 12.47 0.00 0.00 4.95
2846 2998 2.408022 CGGTCGTTAGGCCTCTCG 59.592 66.667 9.68 16.17 40.84 4.04
2858 3010 1.004560 CCTCTCGCTTGTCTTGCCA 60.005 57.895 0.00 0.00 0.00 4.92
2864 3016 1.550524 TCGCTTGTCTTGCCACTAGAT 59.449 47.619 0.00 0.00 0.00 1.98
2869 3021 4.573900 CTTGTCTTGCCACTAGATCAGTT 58.426 43.478 0.00 0.00 34.26 3.16
2955 3240 3.204827 ATCTTGCCGTGATGCCGC 61.205 61.111 0.00 0.00 0.00 6.53
2980 3265 2.300066 CGTGAACGAGCGCACTGAA 61.300 57.895 11.47 0.00 43.02 3.02
2995 3280 3.866651 CACTGAACTGGGAATCGAGATT 58.133 45.455 0.00 0.00 0.00 2.40
2998 3283 2.837591 TGAACTGGGAATCGAGATTGGA 59.162 45.455 2.72 0.00 0.00 3.53
3003 3288 3.609853 TGGGAATCGAGATTGGACAAAG 58.390 45.455 2.72 0.00 0.00 2.77
3005 3290 2.945668 GGAATCGAGATTGGACAAAGGG 59.054 50.000 2.72 0.00 0.00 3.95
3020 3305 2.342648 GGGAACCGCGTGAGAAGT 59.657 61.111 4.92 0.00 40.86 3.01
3021 3306 1.301479 GGGAACCGCGTGAGAAGTT 60.301 57.895 4.92 0.00 40.86 2.66
3022 3307 0.037975 GGGAACCGCGTGAGAAGTTA 60.038 55.000 4.92 0.00 40.86 2.24
3023 3308 1.066136 GGAACCGCGTGAGAAGTTAC 58.934 55.000 4.92 0.00 0.00 2.50
3024 3309 1.066136 GAACCGCGTGAGAAGTTACC 58.934 55.000 4.92 0.00 0.00 2.85
3025 3310 0.665369 AACCGCGTGAGAAGTTACCG 60.665 55.000 4.92 0.00 0.00 4.02
3026 3311 2.442188 CCGCGTGAGAAGTTACCGC 61.442 63.158 4.92 0.00 40.87 5.68
3027 3312 3.070060 GCGTGAGAAGTTACCGCG 58.930 61.111 0.00 0.00 34.66 6.46
3028 3313 1.731969 GCGTGAGAAGTTACCGCGT 60.732 57.895 4.92 0.00 36.35 6.01
3029 3314 1.280206 GCGTGAGAAGTTACCGCGTT 61.280 55.000 4.92 0.00 36.35 4.84
3030 3315 0.433492 CGTGAGAAGTTACCGCGTTG 59.567 55.000 4.92 0.00 0.00 4.10
3031 3316 1.494824 GTGAGAAGTTACCGCGTTGT 58.505 50.000 4.92 0.00 0.00 3.32
3118 3403 5.163343 CCTGGTCGTATAGGATTCTTTTCCA 60.163 44.000 0.00 0.00 38.32 3.53
3119 3404 6.464465 CCTGGTCGTATAGGATTCTTTTCCAT 60.464 42.308 0.00 0.00 38.32 3.41
3120 3405 6.522054 TGGTCGTATAGGATTCTTTTCCATC 58.478 40.000 0.00 0.00 38.32 3.51
3121 3406 5.932883 GGTCGTATAGGATTCTTTTCCATCC 59.067 44.000 0.00 0.00 39.59 3.51
3126 3411 4.423625 AGGATTCTTTTCCATCCTACGG 57.576 45.455 0.00 0.00 46.44 4.02
3127 3412 4.037927 AGGATTCTTTTCCATCCTACGGA 58.962 43.478 0.00 0.00 46.44 4.69
3128 3413 4.101741 AGGATTCTTTTCCATCCTACGGAG 59.898 45.833 0.00 0.00 46.44 4.63
3129 3414 3.906720 TTCTTTTCCATCCTACGGAGG 57.093 47.619 7.64 7.64 45.35 4.30
3133 3418 2.822399 CCATCCTACGGAGGGCAC 59.178 66.667 15.51 0.00 46.78 5.01
3134 3419 1.762460 CCATCCTACGGAGGGCACT 60.762 63.158 15.51 0.00 46.78 4.40
3135 3420 1.338136 CCATCCTACGGAGGGCACTT 61.338 60.000 15.51 0.00 46.78 3.16
3136 3421 0.541863 CATCCTACGGAGGGCACTTT 59.458 55.000 15.51 0.00 43.94 2.66
3137 3422 1.760613 CATCCTACGGAGGGCACTTTA 59.239 52.381 15.51 0.00 43.94 1.85
3138 3423 1.941377 TCCTACGGAGGGCACTTTAA 58.059 50.000 15.51 0.00 43.94 1.52
3139 3424 2.474112 TCCTACGGAGGGCACTTTAAT 58.526 47.619 15.51 0.00 43.94 1.40
3140 3425 2.841881 TCCTACGGAGGGCACTTTAATT 59.158 45.455 15.51 0.00 43.94 1.40
3141 3426 4.032310 TCCTACGGAGGGCACTTTAATTA 58.968 43.478 15.51 0.00 43.94 1.40
3142 3427 4.100498 TCCTACGGAGGGCACTTTAATTAG 59.900 45.833 15.51 0.00 43.94 1.73
3143 3428 3.994931 ACGGAGGGCACTTTAATTAGT 57.005 42.857 0.00 0.00 0.00 2.24
3144 3429 4.296621 ACGGAGGGCACTTTAATTAGTT 57.703 40.909 0.00 0.00 0.00 2.24
3145 3430 4.659115 ACGGAGGGCACTTTAATTAGTTT 58.341 39.130 0.00 0.00 0.00 2.66
3146 3431 5.807909 ACGGAGGGCACTTTAATTAGTTTA 58.192 37.500 0.00 0.00 0.00 2.01
3147 3432 6.420638 ACGGAGGGCACTTTAATTAGTTTAT 58.579 36.000 0.00 0.00 0.00 1.40
3148 3433 6.541278 ACGGAGGGCACTTTAATTAGTTTATC 59.459 38.462 0.00 0.00 0.00 1.75
3149 3434 6.292703 CGGAGGGCACTTTAATTAGTTTATCG 60.293 42.308 0.00 0.00 0.00 2.92
3150 3435 6.764560 GGAGGGCACTTTAATTAGTTTATCGA 59.235 38.462 0.00 0.00 0.00 3.59
3151 3436 7.254692 GGAGGGCACTTTAATTAGTTTATCGAC 60.255 40.741 0.00 0.00 0.00 4.20
3152 3437 7.107542 AGGGCACTTTAATTAGTTTATCGACA 58.892 34.615 0.00 0.00 0.00 4.35
3153 3438 7.065443 AGGGCACTTTAATTAGTTTATCGACAC 59.935 37.037 0.00 0.00 0.00 3.67
3154 3439 7.065443 GGGCACTTTAATTAGTTTATCGACACT 59.935 37.037 0.00 0.00 0.00 3.55
3155 3440 8.448615 GGCACTTTAATTAGTTTATCGACACTT 58.551 33.333 0.00 0.00 0.00 3.16
3163 3448 9.457436 AATTAGTTTATCGACACTTAATTGGGT 57.543 29.630 0.00 0.00 0.00 4.51
3167 3452 9.760077 AGTTTATCGACACTTAATTGGGTATAG 57.240 33.333 0.00 0.00 0.00 1.31
3168 3453 9.538508 GTTTATCGACACTTAATTGGGTATAGT 57.461 33.333 0.00 0.00 0.00 2.12
3171 3456 7.886629 TCGACACTTAATTGGGTATAGTAGT 57.113 36.000 0.00 0.00 0.00 2.73
3172 3457 8.978874 TCGACACTTAATTGGGTATAGTAGTA 57.021 34.615 0.00 0.00 0.00 1.82
3173 3458 8.840321 TCGACACTTAATTGGGTATAGTAGTAC 58.160 37.037 0.00 0.00 0.00 2.73
3174 3459 8.623903 CGACACTTAATTGGGTATAGTAGTACA 58.376 37.037 2.52 0.00 0.00 2.90
3195 3480 9.751542 AGTACATAATTTGCTACTCACTACATC 57.248 33.333 0.00 0.00 0.00 3.06
3196 3481 9.751542 GTACATAATTTGCTACTCACTACATCT 57.248 33.333 0.00 0.00 0.00 2.90
3197 3482 8.654230 ACATAATTTGCTACTCACTACATCTG 57.346 34.615 0.00 0.00 0.00 2.90
3198 3483 8.260818 ACATAATTTGCTACTCACTACATCTGT 58.739 33.333 0.00 0.00 0.00 3.41
3199 3484 9.750125 CATAATTTGCTACTCACTACATCTGTA 57.250 33.333 0.00 0.00 0.00 2.74
3200 3485 9.751542 ATAATTTGCTACTCACTACATCTGTAC 57.248 33.333 0.00 0.00 0.00 2.90
3201 3486 6.584185 TTTGCTACTCACTACATCTGTACA 57.416 37.500 0.00 0.00 0.00 2.90
3202 3487 5.819825 TGCTACTCACTACATCTGTACAG 57.180 43.478 17.17 17.17 0.00 2.74
3203 3488 4.096532 TGCTACTCACTACATCTGTACAGC 59.903 45.833 18.45 2.57 0.00 4.40
3204 3489 4.498345 GCTACTCACTACATCTGTACAGCC 60.498 50.000 18.45 0.00 0.00 4.85
3205 3490 3.702792 ACTCACTACATCTGTACAGCCT 58.297 45.455 18.45 5.00 0.00 4.58
3206 3491 3.445450 ACTCACTACATCTGTACAGCCTG 59.555 47.826 18.45 18.38 0.00 4.85
3207 3492 3.431415 TCACTACATCTGTACAGCCTGT 58.569 45.455 24.83 24.83 0.00 4.00
3208 3493 4.595986 TCACTACATCTGTACAGCCTGTA 58.404 43.478 24.55 24.55 0.00 2.74
3217 3502 2.894763 TACAGCCTGTACACGTTGTT 57.105 45.000 16.76 4.97 0.00 2.83
3218 3503 1.295792 ACAGCCTGTACACGTTGTTG 58.704 50.000 8.20 1.68 0.00 3.33
3219 3504 0.041312 CAGCCTGTACACGTTGTTGC 60.041 55.000 0.00 0.00 0.00 4.17
3220 3505 0.462937 AGCCTGTACACGTTGTTGCA 60.463 50.000 0.00 0.00 0.00 4.08
3221 3506 0.591170 GCCTGTACACGTTGTTGCAT 59.409 50.000 0.00 0.00 0.00 3.96
3222 3507 1.399727 GCCTGTACACGTTGTTGCATC 60.400 52.381 0.00 0.00 0.00 3.91
3223 3508 2.143122 CCTGTACACGTTGTTGCATCT 58.857 47.619 0.00 0.00 0.00 2.90
3224 3509 2.096268 CCTGTACACGTTGTTGCATCTG 60.096 50.000 0.00 0.00 0.00 2.90
3225 3510 2.543848 CTGTACACGTTGTTGCATCTGT 59.456 45.455 0.00 0.00 0.00 3.41
3226 3511 2.939756 TGTACACGTTGTTGCATCTGTT 59.060 40.909 0.00 0.00 0.00 3.16
3227 3512 3.375610 TGTACACGTTGTTGCATCTGTTT 59.624 39.130 0.00 0.00 0.00 2.83
3228 3513 4.571176 TGTACACGTTGTTGCATCTGTTTA 59.429 37.500 0.00 0.00 0.00 2.01
3229 3514 4.829064 ACACGTTGTTGCATCTGTTTAT 57.171 36.364 0.00 0.00 0.00 1.40
3230 3515 5.181690 ACACGTTGTTGCATCTGTTTATT 57.818 34.783 0.00 0.00 0.00 1.40
3231 3516 5.587289 ACACGTTGTTGCATCTGTTTATTT 58.413 33.333 0.00 0.00 0.00 1.40
3232 3517 6.039616 ACACGTTGTTGCATCTGTTTATTTT 58.960 32.000 0.00 0.00 0.00 1.82
3233 3518 7.197017 ACACGTTGTTGCATCTGTTTATTTTA 58.803 30.769 0.00 0.00 0.00 1.52
3234 3519 7.865385 ACACGTTGTTGCATCTGTTTATTTTAT 59.135 29.630 0.00 0.00 0.00 1.40
3235 3520 8.365210 CACGTTGTTGCATCTGTTTATTTTATC 58.635 33.333 0.00 0.00 0.00 1.75
3236 3521 8.079203 ACGTTGTTGCATCTGTTTATTTTATCA 58.921 29.630 0.00 0.00 0.00 2.15
3237 3522 8.910666 CGTTGTTGCATCTGTTTATTTTATCAA 58.089 29.630 0.00 0.00 0.00 2.57
3239 3524 9.755804 TTGTTGCATCTGTTTATTTTATCAACA 57.244 25.926 0.00 0.00 38.44 3.33
3240 3525 9.755804 TGTTGCATCTGTTTATTTTATCAACAA 57.244 25.926 0.00 0.00 37.64 2.83
3243 3528 9.926158 TGCATCTGTTTATTTTATCAACAATGT 57.074 25.926 0.00 0.00 30.15 2.71
3276 3561 7.907214 ATGTATTCTTCCAGTGTAAAGTCAC 57.093 36.000 3.28 0.00 38.46 3.67
3277 3562 6.822442 TGTATTCTTCCAGTGTAAAGTCACA 58.178 36.000 0.00 3.85 40.37 3.58
3285 3570 1.519758 GTGTAAAGTCACACACGACCG 59.480 52.381 1.65 0.00 46.55 4.79
3286 3571 1.404748 TGTAAAGTCACACACGACCGA 59.595 47.619 0.00 0.00 36.52 4.69
3287 3572 2.159268 TGTAAAGTCACACACGACCGAA 60.159 45.455 0.00 0.00 36.52 4.30
3288 3573 1.283736 AAAGTCACACACGACCGAAC 58.716 50.000 0.00 0.00 36.52 3.95
3289 3574 0.529119 AAGTCACACACGACCGAACC 60.529 55.000 0.00 0.00 36.52 3.62
3290 3575 1.952635 GTCACACACGACCGAACCC 60.953 63.158 0.00 0.00 0.00 4.11
3291 3576 2.129146 TCACACACGACCGAACCCT 61.129 57.895 0.00 0.00 0.00 4.34
3292 3577 0.822944 TCACACACGACCGAACCCTA 60.823 55.000 0.00 0.00 0.00 3.53
3293 3578 0.245539 CACACACGACCGAACCCTAT 59.754 55.000 0.00 0.00 0.00 2.57
3294 3579 1.473677 CACACACGACCGAACCCTATA 59.526 52.381 0.00 0.00 0.00 1.31
3295 3580 2.100252 CACACACGACCGAACCCTATAT 59.900 50.000 0.00 0.00 0.00 0.86
3296 3581 2.762327 ACACACGACCGAACCCTATATT 59.238 45.455 0.00 0.00 0.00 1.28
3297 3582 3.196254 ACACACGACCGAACCCTATATTT 59.804 43.478 0.00 0.00 0.00 1.40
3298 3583 4.186159 CACACGACCGAACCCTATATTTT 58.814 43.478 0.00 0.00 0.00 1.82
3299 3584 4.269363 CACACGACCGAACCCTATATTTTC 59.731 45.833 0.00 0.00 0.00 2.29
3300 3585 4.161001 ACACGACCGAACCCTATATTTTCT 59.839 41.667 0.00 0.00 0.00 2.52
3301 3586 4.743644 CACGACCGAACCCTATATTTTCTC 59.256 45.833 0.00 0.00 0.00 2.87
3302 3587 4.202192 ACGACCGAACCCTATATTTTCTCC 60.202 45.833 0.00 0.00 0.00 3.71
3303 3588 4.038883 CGACCGAACCCTATATTTTCTCCT 59.961 45.833 0.00 0.00 0.00 3.69
3304 3589 5.242393 CGACCGAACCCTATATTTTCTCCTA 59.758 44.000 0.00 0.00 0.00 2.94
3305 3590 6.416631 ACCGAACCCTATATTTTCTCCTAC 57.583 41.667 0.00 0.00 0.00 3.18
3306 3591 5.306419 ACCGAACCCTATATTTTCTCCTACC 59.694 44.000 0.00 0.00 0.00 3.18
3307 3592 5.543020 CCGAACCCTATATTTTCTCCTACCT 59.457 44.000 0.00 0.00 0.00 3.08
3308 3593 6.295180 CCGAACCCTATATTTTCTCCTACCTC 60.295 46.154 0.00 0.00 0.00 3.85
3309 3594 6.494146 CGAACCCTATATTTTCTCCTACCTCT 59.506 42.308 0.00 0.00 0.00 3.69
3310 3595 7.668886 CGAACCCTATATTTTCTCCTACCTCTA 59.331 40.741 0.00 0.00 0.00 2.43
3311 3596 8.724113 AACCCTATATTTTCTCCTACCTCTAC 57.276 38.462 0.00 0.00 0.00 2.59
3312 3597 6.947158 ACCCTATATTTTCTCCTACCTCTACG 59.053 42.308 0.00 0.00 0.00 3.51
3313 3598 7.173722 CCCTATATTTTCTCCTACCTCTACGA 58.826 42.308 0.00 0.00 0.00 3.43
3314 3599 7.337436 CCCTATATTTTCTCCTACCTCTACGAG 59.663 44.444 0.00 0.00 0.00 4.18
3315 3600 4.922471 ATTTTCTCCTACCTCTACGAGC 57.078 45.455 0.00 0.00 0.00 5.03
3316 3601 3.648507 TTTCTCCTACCTCTACGAGCT 57.351 47.619 0.00 0.00 0.00 4.09
3317 3602 2.623878 TCTCCTACCTCTACGAGCTG 57.376 55.000 0.00 0.00 0.00 4.24
3318 3603 0.948678 CTCCTACCTCTACGAGCTGC 59.051 60.000 0.00 0.00 0.00 5.25
3319 3604 0.465824 TCCTACCTCTACGAGCTGCC 60.466 60.000 0.00 0.00 0.00 4.85
3320 3605 1.649815 CTACCTCTACGAGCTGCCG 59.350 63.158 0.00 8.60 0.00 5.69
3321 3606 2.395367 CTACCTCTACGAGCTGCCGC 62.395 65.000 9.82 0.00 0.00 6.53
3332 3617 3.047280 CTGCCGCTACCGTTGCAA 61.047 61.111 0.00 0.00 32.66 4.08
3333 3618 3.308878 CTGCCGCTACCGTTGCAAC 62.309 63.158 19.89 19.89 32.66 4.17
3334 3619 3.047877 GCCGCTACCGTTGCAACT 61.048 61.111 26.09 12.00 0.00 3.16
3335 3620 3.023591 GCCGCTACCGTTGCAACTC 62.024 63.158 26.09 9.64 0.00 3.01
3336 3621 2.388232 CCGCTACCGTTGCAACTCC 61.388 63.158 26.09 9.32 0.00 3.85
3337 3622 2.726691 CGCTACCGTTGCAACTCCG 61.727 63.158 26.09 13.94 0.00 4.63
3338 3623 3.023591 GCTACCGTTGCAACTCCGC 62.024 63.158 26.09 18.23 0.00 5.54
3339 3624 2.357760 TACCGTTGCAACTCCGCC 60.358 61.111 26.09 0.00 0.00 6.13
3340 3625 3.166490 TACCGTTGCAACTCCGCCA 62.166 57.895 26.09 3.84 0.00 5.69
3341 3626 2.457743 TACCGTTGCAACTCCGCCAT 62.458 55.000 26.09 7.06 0.00 4.40
3342 3627 2.480555 CGTTGCAACTCCGCCATC 59.519 61.111 26.09 0.00 0.00 3.51
3343 3628 2.480555 GTTGCAACTCCGCCATCG 59.519 61.111 22.36 0.00 0.00 3.84
3344 3629 3.430862 TTGCAACTCCGCCATCGC 61.431 61.111 0.00 0.00 0.00 4.58
3345 3630 4.695993 TGCAACTCCGCCATCGCA 62.696 61.111 0.00 0.00 34.03 5.10
3346 3631 3.430862 GCAACTCCGCCATCGCAA 61.431 61.111 0.00 0.00 34.03 4.85
3347 3632 2.787249 CAACTCCGCCATCGCAAG 59.213 61.111 0.00 0.00 34.03 4.01
3348 3633 2.436646 AACTCCGCCATCGCAAGG 60.437 61.111 0.00 0.00 38.47 3.61
3349 3634 3.254024 AACTCCGCCATCGCAAGGT 62.254 57.895 0.00 0.00 38.47 3.50
3350 3635 2.892425 CTCCGCCATCGCAAGGTC 60.892 66.667 0.00 0.00 38.47 3.85
3351 3636 3.376935 CTCCGCCATCGCAAGGTCT 62.377 63.158 0.00 0.00 38.47 3.85
3352 3637 2.016393 CTCCGCCATCGCAAGGTCTA 62.016 60.000 0.00 0.00 38.47 2.59
3353 3638 1.883084 CCGCCATCGCAAGGTCTAC 60.883 63.158 0.00 0.00 38.47 2.59
3354 3639 1.141881 CGCCATCGCAAGGTCTACT 59.858 57.895 0.00 0.00 38.47 2.57
3355 3640 0.384309 CGCCATCGCAAGGTCTACTA 59.616 55.000 0.00 0.00 38.47 1.82
3356 3641 1.000163 CGCCATCGCAAGGTCTACTAT 60.000 52.381 0.00 0.00 38.47 2.12
3357 3642 2.678324 GCCATCGCAAGGTCTACTATC 58.322 52.381 0.00 0.00 38.47 2.08
3358 3643 2.610727 GCCATCGCAAGGTCTACTATCC 60.611 54.545 0.00 0.00 38.47 2.59
3359 3644 2.628178 CCATCGCAAGGTCTACTATCCA 59.372 50.000 0.00 0.00 38.47 3.41
3360 3645 3.553096 CCATCGCAAGGTCTACTATCCAC 60.553 52.174 0.00 0.00 38.47 4.02
3361 3646 3.014304 TCGCAAGGTCTACTATCCACT 57.986 47.619 0.00 0.00 38.47 4.00
3362 3647 4.160642 TCGCAAGGTCTACTATCCACTA 57.839 45.455 0.00 0.00 38.47 2.74
3363 3648 4.726583 TCGCAAGGTCTACTATCCACTAT 58.273 43.478 0.00 0.00 38.47 2.12
3364 3649 4.519350 TCGCAAGGTCTACTATCCACTATG 59.481 45.833 0.00 0.00 38.47 2.23
3365 3650 4.519350 CGCAAGGTCTACTATCCACTATGA 59.481 45.833 0.00 0.00 0.00 2.15
3366 3651 5.184096 CGCAAGGTCTACTATCCACTATGAT 59.816 44.000 0.00 0.00 0.00 2.45
3367 3652 6.374613 CGCAAGGTCTACTATCCACTATGATA 59.625 42.308 0.00 0.00 0.00 2.15
3368 3653 7.540299 GCAAGGTCTACTATCCACTATGATAC 58.460 42.308 0.00 0.00 0.00 2.24
3369 3654 7.176865 GCAAGGTCTACTATCCACTATGATACA 59.823 40.741 0.00 0.00 0.00 2.29
3370 3655 9.078990 CAAGGTCTACTATCCACTATGATACAA 57.921 37.037 0.00 0.00 0.00 2.41
3371 3656 9.656323 AAGGTCTACTATCCACTATGATACAAA 57.344 33.333 0.00 0.00 0.00 2.83
3372 3657 9.080097 AGGTCTACTATCCACTATGATACAAAC 57.920 37.037 0.00 0.00 0.00 2.93
3373 3658 8.857098 GGTCTACTATCCACTATGATACAAACA 58.143 37.037 0.00 0.00 0.00 2.83
3374 3659 9.900710 GTCTACTATCCACTATGATACAAACAG 57.099 37.037 0.00 0.00 0.00 3.16
3375 3660 9.642343 TCTACTATCCACTATGATACAAACAGT 57.358 33.333 0.00 0.00 0.00 3.55
3378 3663 9.642343 ACTATCCACTATGATACAAACAGTAGA 57.358 33.333 0.00 0.00 35.85 2.59
3380 3665 6.806751 TCCACTATGATACAAACAGTAGAGC 58.193 40.000 0.00 0.00 35.85 4.09
3381 3666 5.687730 CCACTATGATACAAACAGTAGAGCG 59.312 44.000 0.00 0.00 35.85 5.03
3382 3667 6.459710 CCACTATGATACAAACAGTAGAGCGA 60.460 42.308 0.00 0.00 35.85 4.93
3383 3668 6.972901 CACTATGATACAAACAGTAGAGCGAA 59.027 38.462 0.00 0.00 35.85 4.70
3384 3669 7.649705 CACTATGATACAAACAGTAGAGCGAAT 59.350 37.037 0.00 0.00 35.85 3.34
3385 3670 7.863375 ACTATGATACAAACAGTAGAGCGAATC 59.137 37.037 0.00 0.00 35.85 2.52
3386 3671 5.961272 TGATACAAACAGTAGAGCGAATCA 58.039 37.500 0.00 0.00 35.85 2.57
3387 3672 6.394809 TGATACAAACAGTAGAGCGAATCAA 58.605 36.000 0.00 0.00 35.85 2.57
3388 3673 6.871492 TGATACAAACAGTAGAGCGAATCAAA 59.129 34.615 0.00 0.00 35.85 2.69
3389 3674 5.344207 ACAAACAGTAGAGCGAATCAAAC 57.656 39.130 0.00 0.00 0.00 2.93
3390 3675 4.213482 ACAAACAGTAGAGCGAATCAAACC 59.787 41.667 0.00 0.00 0.00 3.27
3391 3676 2.973945 ACAGTAGAGCGAATCAAACCC 58.026 47.619 0.00 0.00 0.00 4.11
3392 3677 2.567615 ACAGTAGAGCGAATCAAACCCT 59.432 45.455 0.00 0.00 0.00 4.34
3393 3678 3.190874 CAGTAGAGCGAATCAAACCCTC 58.809 50.000 0.00 0.00 0.00 4.30
3394 3679 2.832129 AGTAGAGCGAATCAAACCCTCA 59.168 45.455 0.00 0.00 0.00 3.86
3395 3680 2.859165 AGAGCGAATCAAACCCTCAA 57.141 45.000 0.00 0.00 0.00 3.02
3396 3681 2.704572 AGAGCGAATCAAACCCTCAAG 58.295 47.619 0.00 0.00 0.00 3.02
3397 3682 2.039084 AGAGCGAATCAAACCCTCAAGT 59.961 45.455 0.00 0.00 0.00 3.16
3398 3683 2.416893 GAGCGAATCAAACCCTCAAGTC 59.583 50.000 0.00 0.00 0.00 3.01
3399 3684 1.468914 GCGAATCAAACCCTCAAGTCC 59.531 52.381 0.00 0.00 0.00 3.85
3400 3685 2.778299 CGAATCAAACCCTCAAGTCCA 58.222 47.619 0.00 0.00 0.00 4.02
3401 3686 2.744202 CGAATCAAACCCTCAAGTCCAG 59.256 50.000 0.00 0.00 0.00 3.86
3402 3687 3.557054 CGAATCAAACCCTCAAGTCCAGA 60.557 47.826 0.00 0.00 0.00 3.86
3403 3688 4.593956 GAATCAAACCCTCAAGTCCAGAT 58.406 43.478 0.00 0.00 0.00 2.90
3404 3689 4.664688 ATCAAACCCTCAAGTCCAGATT 57.335 40.909 0.00 0.00 0.00 2.40
3405 3690 4.021102 TCAAACCCTCAAGTCCAGATTC 57.979 45.455 0.00 0.00 0.00 2.52
3406 3691 3.084786 CAAACCCTCAAGTCCAGATTCC 58.915 50.000 0.00 0.00 0.00 3.01
3407 3692 0.905357 ACCCTCAAGTCCAGATTCCG 59.095 55.000 0.00 0.00 0.00 4.30
3408 3693 0.179000 CCCTCAAGTCCAGATTCCGG 59.821 60.000 0.00 0.00 0.00 5.14
3409 3694 0.905357 CCTCAAGTCCAGATTCCGGT 59.095 55.000 0.00 0.00 0.00 5.28
3410 3695 1.134670 CCTCAAGTCCAGATTCCGGTC 60.135 57.143 0.00 0.00 0.00 4.79
3411 3696 0.530744 TCAAGTCCAGATTCCGGTCG 59.469 55.000 0.00 0.00 0.00 4.79
3412 3697 0.246635 CAAGTCCAGATTCCGGTCGT 59.753 55.000 0.00 0.00 0.00 4.34
3413 3698 0.974383 AAGTCCAGATTCCGGTCGTT 59.026 50.000 0.00 0.00 0.00 3.85
3414 3699 0.974383 AGTCCAGATTCCGGTCGTTT 59.026 50.000 0.00 0.00 0.00 3.60
3415 3700 1.067071 AGTCCAGATTCCGGTCGTTTC 60.067 52.381 0.00 0.00 0.00 2.78
3416 3701 0.970640 TCCAGATTCCGGTCGTTTCA 59.029 50.000 0.00 0.00 0.00 2.69
3417 3702 1.345089 TCCAGATTCCGGTCGTTTCAA 59.655 47.619 0.00 0.00 0.00 2.69
3418 3703 1.463444 CCAGATTCCGGTCGTTTCAAC 59.537 52.381 0.00 0.00 0.00 3.18
3419 3704 1.463444 CAGATTCCGGTCGTTTCAACC 59.537 52.381 0.00 0.00 0.00 3.77
3420 3705 0.800631 GATTCCGGTCGTTTCAACCC 59.199 55.000 0.00 0.00 32.89 4.11
3421 3706 0.399075 ATTCCGGTCGTTTCAACCCT 59.601 50.000 0.00 0.00 32.89 4.34
3422 3707 0.533308 TTCCGGTCGTTTCAACCCTG 60.533 55.000 0.00 0.00 32.89 4.45
3423 3708 1.070105 CCGGTCGTTTCAACCCTGA 59.930 57.895 0.00 0.00 32.89 3.86
3424 3709 0.533308 CCGGTCGTTTCAACCCTGAA 60.533 55.000 0.00 0.00 39.87 3.02
3425 3710 1.301423 CGGTCGTTTCAACCCTGAAA 58.699 50.000 0.00 0.00 46.88 2.69
3437 3722 8.630054 TTTCAACCCTGAAATATATAATCCCG 57.370 34.615 0.00 0.00 44.76 5.14
3438 3723 6.717289 TCAACCCTGAAATATATAATCCCGG 58.283 40.000 0.00 0.00 0.00 5.73
3439 3724 6.273730 TCAACCCTGAAATATATAATCCCGGT 59.726 38.462 0.00 0.00 0.00 5.28
3440 3725 6.309389 ACCCTGAAATATATAATCCCGGTC 57.691 41.667 0.00 0.00 0.00 4.79
3441 3726 6.030082 ACCCTGAAATATATAATCCCGGTCT 58.970 40.000 0.00 0.00 0.00 3.85
3442 3727 7.194050 ACCCTGAAATATATAATCCCGGTCTA 58.806 38.462 0.00 0.00 0.00 2.59
3443 3728 7.681168 ACCCTGAAATATATAATCCCGGTCTAA 59.319 37.037 0.00 0.00 0.00 2.10
3444 3729 8.545472 CCCTGAAATATATAATCCCGGTCTAAA 58.455 37.037 0.00 0.00 0.00 1.85
3451 3736 9.901172 ATATATAATCCCGGTCTAAATCAAACC 57.099 33.333 0.00 0.00 0.00 3.27
3452 3737 2.793288 TCCCGGTCTAAATCAAACCC 57.207 50.000 0.00 0.00 0.00 4.11
3453 3738 2.271777 TCCCGGTCTAAATCAAACCCT 58.728 47.619 0.00 0.00 0.00 4.34
3454 3739 2.026636 TCCCGGTCTAAATCAAACCCTG 60.027 50.000 0.00 0.00 0.00 4.45
3455 3740 2.365582 CCGGTCTAAATCAAACCCTGG 58.634 52.381 0.00 0.00 0.00 4.45
3456 3741 2.026636 CCGGTCTAAATCAAACCCTGGA 60.027 50.000 0.00 0.00 0.00 3.86
3457 3742 3.270877 CGGTCTAAATCAAACCCTGGAG 58.729 50.000 0.00 0.00 0.00 3.86
3458 3743 3.307480 CGGTCTAAATCAAACCCTGGAGT 60.307 47.826 0.00 0.00 0.00 3.85
3459 3744 4.262617 GGTCTAAATCAAACCCTGGAGTC 58.737 47.826 0.00 0.00 0.00 3.36
3460 3745 3.933332 GTCTAAATCAAACCCTGGAGTCG 59.067 47.826 0.00 0.00 0.00 4.18
3461 3746 2.951229 AAATCAAACCCTGGAGTCGT 57.049 45.000 0.00 0.00 0.00 4.34
3462 3747 2.951229 AATCAAACCCTGGAGTCGTT 57.049 45.000 0.00 0.00 0.00 3.85
3463 3748 2.951229 ATCAAACCCTGGAGTCGTTT 57.049 45.000 0.00 0.00 0.00 3.60
3464 3749 1.961793 TCAAACCCTGGAGTCGTTTG 58.038 50.000 15.78 15.78 44.89 2.93
3465 3750 0.310854 CAAACCCTGGAGTCGTTTGC 59.689 55.000 11.56 0.00 39.73 3.68
3466 3751 0.822121 AAACCCTGGAGTCGTTTGCC 60.822 55.000 0.00 0.00 0.00 4.52
3467 3752 1.990160 AACCCTGGAGTCGTTTGCCA 61.990 55.000 0.00 0.00 0.00 4.92
3468 3753 1.672356 CCCTGGAGTCGTTTGCCAG 60.672 63.158 0.00 0.00 46.83 4.85
3470 3755 4.771127 TGGAGTCGTTTGCCAGAC 57.229 55.556 0.00 0.00 37.63 3.51
3471 3756 1.826709 TGGAGTCGTTTGCCAGACA 59.173 52.632 0.00 0.00 39.67 3.41
3472 3757 0.179234 TGGAGTCGTTTGCCAGACAA 59.821 50.000 0.00 0.00 39.67 3.18
3473 3758 0.868406 GGAGTCGTTTGCCAGACAAG 59.132 55.000 0.00 0.00 40.06 3.16
3474 3759 0.868406 GAGTCGTTTGCCAGACAAGG 59.132 55.000 0.00 0.00 40.06 3.61
3475 3760 0.468226 AGTCGTTTGCCAGACAAGGA 59.532 50.000 0.00 0.00 40.06 3.36
3476 3761 1.072331 AGTCGTTTGCCAGACAAGGAT 59.928 47.619 0.00 0.00 40.06 3.24
3477 3762 1.880027 GTCGTTTGCCAGACAAGGATT 59.120 47.619 0.00 0.00 40.06 3.01
3478 3763 3.071479 GTCGTTTGCCAGACAAGGATTA 58.929 45.455 0.00 0.00 40.06 1.75
3479 3764 3.071479 TCGTTTGCCAGACAAGGATTAC 58.929 45.455 0.00 0.00 40.06 1.89
3480 3765 2.159707 CGTTTGCCAGACAAGGATTACG 60.160 50.000 0.00 0.00 40.06 3.18
3481 3766 3.071479 GTTTGCCAGACAAGGATTACGA 58.929 45.455 0.00 0.00 40.06 3.43
3482 3767 3.410631 TTGCCAGACAAGGATTACGAA 57.589 42.857 0.00 0.00 33.24 3.85
3483 3768 2.972625 TGCCAGACAAGGATTACGAAG 58.027 47.619 0.00 0.00 0.00 3.79
3484 3769 2.565391 TGCCAGACAAGGATTACGAAGA 59.435 45.455 0.00 0.00 0.00 2.87
3485 3770 3.007506 TGCCAGACAAGGATTACGAAGAA 59.992 43.478 0.00 0.00 0.00 2.52
3486 3771 4.192317 GCCAGACAAGGATTACGAAGAAT 58.808 43.478 0.00 0.00 0.00 2.40
3487 3772 4.034510 GCCAGACAAGGATTACGAAGAATG 59.965 45.833 0.00 0.00 0.00 2.67
3488 3773 4.572389 CCAGACAAGGATTACGAAGAATGG 59.428 45.833 0.00 0.00 0.00 3.16
3489 3774 4.034510 CAGACAAGGATTACGAAGAATGGC 59.965 45.833 0.00 0.00 0.00 4.40
3490 3775 3.279434 ACAAGGATTACGAAGAATGGCC 58.721 45.455 0.00 0.00 0.00 5.36
3491 3776 2.240493 AGGATTACGAAGAATGGCCG 57.760 50.000 0.00 0.00 0.00 6.13
3492 3777 1.202651 AGGATTACGAAGAATGGCCGG 60.203 52.381 0.00 0.00 0.00 6.13
3493 3778 1.226746 GATTACGAAGAATGGCCGGG 58.773 55.000 2.18 0.00 0.00 5.73
3494 3779 0.834612 ATTACGAAGAATGGCCGGGA 59.165 50.000 2.18 0.00 0.00 5.14
3495 3780 0.834612 TTACGAAGAATGGCCGGGAT 59.165 50.000 2.18 0.00 0.00 3.85
3496 3781 0.834612 TACGAAGAATGGCCGGGATT 59.165 50.000 2.18 0.00 0.00 3.01
3497 3782 0.748005 ACGAAGAATGGCCGGGATTG 60.748 55.000 2.18 0.00 0.00 2.67
3498 3783 1.447317 CGAAGAATGGCCGGGATTGG 61.447 60.000 2.18 0.00 0.00 3.16
3499 3784 0.395724 GAAGAATGGCCGGGATTGGT 60.396 55.000 2.18 0.00 0.00 3.67
3500 3785 0.684153 AAGAATGGCCGGGATTGGTG 60.684 55.000 2.18 0.00 0.00 4.17
3501 3786 2.043046 AATGGCCGGGATTGGTGG 60.043 61.111 2.18 0.00 0.00 4.61
3506 3791 4.189580 CCGGGATTGGTGGCGGAT 62.190 66.667 0.00 0.00 0.00 4.18
3507 3792 2.124320 CGGGATTGGTGGCGGATT 60.124 61.111 0.00 0.00 0.00 3.01
3508 3793 2.186826 CGGGATTGGTGGCGGATTC 61.187 63.158 0.00 0.00 0.00 2.52
3509 3794 1.828224 GGGATTGGTGGCGGATTCC 60.828 63.158 0.00 0.00 0.00 3.01
3510 3795 1.227383 GGATTGGTGGCGGATTCCT 59.773 57.895 0.30 0.00 0.00 3.36
3511 3796 0.472471 GGATTGGTGGCGGATTCCTA 59.528 55.000 0.30 0.00 0.00 2.94
3512 3797 1.073923 GGATTGGTGGCGGATTCCTAT 59.926 52.381 0.30 0.00 0.00 2.57
3513 3798 2.489073 GGATTGGTGGCGGATTCCTATT 60.489 50.000 0.30 0.00 0.00 1.73
3514 3799 2.818751 TTGGTGGCGGATTCCTATTT 57.181 45.000 0.30 0.00 0.00 1.40
3515 3800 2.051334 TGGTGGCGGATTCCTATTTG 57.949 50.000 0.30 0.00 0.00 2.32
3516 3801 0.668535 GGTGGCGGATTCCTATTTGC 59.331 55.000 0.30 0.00 0.00 3.68
3517 3802 0.668535 GTGGCGGATTCCTATTTGCC 59.331 55.000 10.65 10.65 42.76 4.52
3518 3803 0.817634 TGGCGGATTCCTATTTGCCG 60.818 55.000 12.23 0.00 45.34 5.69
3520 3805 1.949257 CGGATTCCTATTTGCCGCC 59.051 57.895 0.30 0.00 35.17 6.13
3521 3806 1.515521 CGGATTCCTATTTGCCGCCC 61.516 60.000 0.30 0.00 35.17 6.13
3522 3807 1.515521 GGATTCCTATTTGCCGCCCG 61.516 60.000 0.00 0.00 0.00 6.13
3523 3808 0.818040 GATTCCTATTTGCCGCCCGT 60.818 55.000 0.00 0.00 0.00 5.28
3524 3809 1.101049 ATTCCTATTTGCCGCCCGTG 61.101 55.000 0.00 0.00 0.00 4.94
3525 3810 3.209097 CCTATTTGCCGCCCGTGG 61.209 66.667 0.00 0.00 0.00 4.94
3526 3811 3.209097 CTATTTGCCGCCCGTGGG 61.209 66.667 0.00 0.00 38.57 4.61
3536 3821 3.673484 CCCGTGGGCAGCAAACAG 61.673 66.667 0.00 0.00 0.00 3.16
3537 3822 4.347453 CCGTGGGCAGCAAACAGC 62.347 66.667 0.00 0.00 46.19 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 4.578105 CAGAATTTATGCAACTCCTCTCCC 59.422 45.833 0.00 0.00 0.00 4.30
67 68 4.690122 AGCCTTTGCATCAGAATTTATGC 58.310 39.130 12.09 12.09 46.92 3.14
120 121 2.534990 TCCAATAGTTTTGCCCCCAAG 58.465 47.619 0.00 0.00 31.52 3.61
138 139 3.859386 CGCAAGATTATGCCAAAGTTTCC 59.141 43.478 0.00 0.00 43.47 3.13
186 187 2.039084 AGACAAAGAAATCGCTCCACCT 59.961 45.455 0.00 0.00 0.00 4.00
187 188 2.427506 AGACAAAGAAATCGCTCCACC 58.572 47.619 0.00 0.00 0.00 4.61
228 237 5.938125 ACCCACTGCTTTTATTGTACTGTAG 59.062 40.000 0.00 0.00 0.00 2.74
233 242 5.055642 GGAACCCACTGCTTTTATTGTAC 57.944 43.478 0.00 0.00 0.00 2.90
309 402 5.702670 TCTTCTCAACCATGAATCACTTGTC 59.297 40.000 0.00 0.00 34.49 3.18
345 438 6.456718 GCAATGAGCTGTATCTCAAACTTCTC 60.457 42.308 0.00 0.00 45.17 2.87
389 482 4.537135 TTCTTTACACAGGGAGTAGCTG 57.463 45.455 0.00 0.00 0.00 4.24
429 522 1.464997 GTTCAGTTCTGTTCGATGCCC 59.535 52.381 0.00 0.00 0.00 5.36
444 537 6.857777 AAGACATGAGTTTCTTCAGTTCAG 57.142 37.500 0.00 0.00 0.00 3.02
469 562 3.303938 CTGGGAAGGAGCATCTAGAGAA 58.696 50.000 0.00 0.00 33.73 2.87
477 570 0.043940 AGAGGACTGGGAAGGAGCAT 59.956 55.000 0.00 0.00 0.00 3.79
540 636 1.153628 GCCTCGCCGACTGTGTAAT 60.154 57.895 0.00 0.00 0.00 1.89
560 656 1.382522 ATCAAATTGCAGCCGACGAT 58.617 45.000 0.00 0.00 0.00 3.73
571 667 6.592607 CACTCCAATTTCTCCCAATCAAATTG 59.407 38.462 8.68 8.68 42.99 2.32
575 671 4.766891 GTCACTCCAATTTCTCCCAATCAA 59.233 41.667 0.00 0.00 0.00 2.57
588 684 2.346766 TTGTGCACAGTCACTCCAAT 57.653 45.000 20.59 0.00 37.81 3.16
618 714 6.349033 GCTTGGTGGTTACAATTAGTTAGTGG 60.349 42.308 0.00 0.00 0.00 4.00
621 717 8.038944 TCTAGCTTGGTGGTTACAATTAGTTAG 58.961 37.037 0.00 0.00 0.00 2.34
658 754 4.764771 GCCTGAATGGGCCAGCCA 62.765 66.667 13.78 11.39 45.92 4.75
665 761 0.819582 GTGGTGAATGCCTGAATGGG 59.180 55.000 0.00 0.00 36.00 4.00
666 762 1.843368 AGTGGTGAATGCCTGAATGG 58.157 50.000 0.00 0.00 39.35 3.16
667 763 2.559668 ACAAGTGGTGAATGCCTGAATG 59.440 45.455 0.00 0.00 0.00 2.67
668 764 2.880443 ACAAGTGGTGAATGCCTGAAT 58.120 42.857 0.00 0.00 0.00 2.57
669 765 2.363306 ACAAGTGGTGAATGCCTGAA 57.637 45.000 0.00 0.00 0.00 3.02
670 766 2.229792 GAACAAGTGGTGAATGCCTGA 58.770 47.619 0.00 0.00 0.00 3.86
671 767 1.270550 GGAACAAGTGGTGAATGCCTG 59.729 52.381 0.00 0.00 0.00 4.85
672 768 1.133513 TGGAACAAGTGGTGAATGCCT 60.134 47.619 0.00 0.00 31.92 4.75
673 769 1.000274 GTGGAACAAGTGGTGAATGCC 60.000 52.381 0.00 0.00 44.16 4.40
674 770 2.422276 GTGGAACAAGTGGTGAATGC 57.578 50.000 0.00 0.00 44.16 3.56
687 783 4.753107 TCTTGGTCTCGTAATTTGTGGAAC 59.247 41.667 0.00 0.00 37.35 3.62
701 797 2.501723 TCCATTGCTACCTCTTGGTCTC 59.498 50.000 0.00 0.00 44.78 3.36
1611 1728 3.311110 GCGTGGGACTGGAGTGGA 61.311 66.667 0.00 0.00 0.00 4.02
1612 1729 4.742201 CGCGTGGGACTGGAGTGG 62.742 72.222 0.00 0.00 0.00 4.00
1731 1854 2.038329 TGTAGCCGTACCCCTGCT 59.962 61.111 0.00 0.00 39.10 4.24
1738 1861 1.529826 CCGTCGTTAGTGTAGCCGTAC 60.530 57.143 0.00 0.00 0.00 3.67
2133 2259 4.965858 GCTCGATCTCGTCCGCCG 62.966 72.222 0.00 0.00 40.80 6.46
2136 2262 0.385348 CATCTGCTCGATCTCGTCCG 60.385 60.000 0.00 0.00 40.80 4.79
2284 2410 1.536073 TCCACTCGCTGGAGAACAGG 61.536 60.000 0.00 0.00 44.99 4.00
2318 2444 2.045926 GCTCCCACCATTGACGCT 60.046 61.111 0.00 0.00 0.00 5.07
2410 2536 2.747686 CGGCACAAGTACCCCTGT 59.252 61.111 0.00 0.00 0.00 4.00
2431 2557 1.611261 CTCCGTGTACCCCTTCCCA 60.611 63.158 0.00 0.00 0.00 4.37
2439 2565 1.542187 AACTCTGGCCTCCGTGTACC 61.542 60.000 3.32 0.00 0.00 3.34
2465 2591 1.069500 AGGTCATTGTGCGCGTAAAAC 60.069 47.619 8.43 1.98 0.00 2.43
2499 2625 5.242393 TCGTATAGGATTCTTTTCCCCGTAG 59.758 44.000 0.00 0.00 36.35 3.51
2500 2626 5.010012 GTCGTATAGGATTCTTTTCCCCGTA 59.990 44.000 0.00 0.00 36.35 4.02
2501 2627 3.962718 TCGTATAGGATTCTTTTCCCCGT 59.037 43.478 0.00 0.00 36.35 5.28
2502 2628 4.202182 TGTCGTATAGGATTCTTTTCCCCG 60.202 45.833 0.00 0.00 36.35 5.73
2503 2629 5.070047 TCTGTCGTATAGGATTCTTTTCCCC 59.930 44.000 0.00 0.00 36.35 4.81
2504 2630 5.984323 GTCTGTCGTATAGGATTCTTTTCCC 59.016 44.000 0.00 0.00 36.35 3.97
2505 2631 5.984323 GGTCTGTCGTATAGGATTCTTTTCC 59.016 44.000 0.00 0.00 35.90 3.13
2506 2632 5.686397 CGGTCTGTCGTATAGGATTCTTTTC 59.314 44.000 0.00 0.00 0.00 2.29
2507 2633 5.451520 CCGGTCTGTCGTATAGGATTCTTTT 60.452 44.000 0.00 0.00 0.00 2.27
2508 2634 4.037684 CCGGTCTGTCGTATAGGATTCTTT 59.962 45.833 0.00 0.00 0.00 2.52
2509 2635 3.568853 CCGGTCTGTCGTATAGGATTCTT 59.431 47.826 0.00 0.00 0.00 2.52
2510 2636 3.147629 CCGGTCTGTCGTATAGGATTCT 58.852 50.000 0.00 0.00 0.00 2.40
2511 2637 2.228343 CCCGGTCTGTCGTATAGGATTC 59.772 54.545 0.00 0.00 0.00 2.52
2522 2648 1.226888 GCATACGACCCGGTCTGTC 60.227 63.158 15.70 0.00 0.00 3.51
2523 2649 1.255667 AAGCATACGACCCGGTCTGT 61.256 55.000 15.70 15.88 0.00 3.41
2524 2650 0.108329 AAAGCATACGACCCGGTCTG 60.108 55.000 15.70 11.18 0.00 3.51
2525 2651 0.175073 GAAAGCATACGACCCGGTCT 59.825 55.000 15.70 5.51 0.00 3.85
2545 2671 3.054875 TCAATTGAGTGGGTCTCCAGATG 60.055 47.826 3.38 0.00 45.05 2.90
2574 2700 3.489738 GCATTAAGATTCGCATTGCCAGT 60.490 43.478 2.41 0.00 0.00 4.00
2601 2729 0.106819 CAGGGCATCAGGGAAGAAGG 60.107 60.000 0.00 0.00 0.00 3.46
2622 2750 3.126858 ACGATGGTCCGTTTGAATTCATG 59.873 43.478 9.40 2.55 40.17 3.07
2623 2751 3.126858 CACGATGGTCCGTTTGAATTCAT 59.873 43.478 9.40 0.00 41.29 2.57
2630 2758 2.686816 GGCCACGATGGTCCGTTTG 61.687 63.158 0.00 0.00 41.29 2.93
2638 2766 0.107017 AAGGAGAATGGCCACGATGG 60.107 55.000 8.16 0.00 41.55 3.51
2653 2781 4.160329 ACACCAGATCTGAACTGTAAGGA 58.840 43.478 24.62 0.00 39.30 3.36
2711 2839 4.666253 GGGGCAAGCAGGCTGACA 62.666 66.667 20.86 0.00 43.56 3.58
2739 2867 2.383527 CGGCGTCAAGGAGTTCTGC 61.384 63.158 0.00 0.00 0.00 4.26
2750 2878 3.047280 GTGATTGTGCCGGCGTCA 61.047 61.111 23.90 20.53 0.00 4.35
2779 2907 3.726517 CAACAGACTTGCCCGGCG 61.727 66.667 4.58 0.00 0.00 6.46
2780 2908 4.043200 GCAACAGACTTGCCCGGC 62.043 66.667 1.04 1.04 39.38 6.13
2784 2936 2.558313 GCGAGCAACAGACTTGCC 59.442 61.111 1.45 0.00 45.98 4.52
2846 2998 2.935201 CTGATCTAGTGGCAAGACAAGC 59.065 50.000 0.00 0.00 0.00 4.01
2923 3076 1.315257 AAGATGGCGGCAACACATCC 61.315 55.000 18.31 0.00 46.29 3.51
2938 3091 3.204827 GCGGCATCACGGCAAGAT 61.205 61.111 0.00 0.00 43.73 2.40
2964 3249 1.067416 AGTTCAGTGCGCTCGTTCA 59.933 52.632 9.73 0.00 0.00 3.18
2980 3265 2.187958 TGTCCAATCTCGATTCCCAGT 58.812 47.619 0.00 0.00 0.00 4.00
2995 3280 2.281208 CGCGGTTCCCTTTGTCCA 60.281 61.111 0.00 0.00 0.00 4.02
2998 3283 1.597027 CTCACGCGGTTCCCTTTGT 60.597 57.895 12.47 0.00 0.00 2.83
3003 3288 0.037975 TAACTTCTCACGCGGTTCCC 60.038 55.000 12.47 0.00 0.00 3.97
3005 3290 1.066136 GGTAACTTCTCACGCGGTTC 58.934 55.000 12.47 0.00 0.00 3.62
3014 3299 3.504863 TGATACAACGCGGTAACTTCTC 58.495 45.455 12.47 0.00 0.00 2.87
3015 3300 3.581024 TGATACAACGCGGTAACTTCT 57.419 42.857 12.47 0.00 0.00 2.85
3016 3301 3.922240 TCTTGATACAACGCGGTAACTTC 59.078 43.478 12.47 0.00 0.00 3.01
3017 3302 3.916761 TCTTGATACAACGCGGTAACTT 58.083 40.909 12.47 0.00 0.00 2.66
3018 3303 3.581024 TCTTGATACAACGCGGTAACT 57.419 42.857 12.47 0.00 0.00 2.24
3019 3304 4.327898 TGAATCTTGATACAACGCGGTAAC 59.672 41.667 12.47 3.35 0.00 2.50
3020 3305 4.327898 GTGAATCTTGATACAACGCGGTAA 59.672 41.667 12.47 0.00 0.00 2.85
3021 3306 3.861113 GTGAATCTTGATACAACGCGGTA 59.139 43.478 12.47 4.06 0.00 4.02
3022 3307 2.671396 GTGAATCTTGATACAACGCGGT 59.329 45.455 12.47 0.00 0.00 5.68
3023 3308 2.285026 CGTGAATCTTGATACAACGCGG 60.285 50.000 12.47 0.00 0.00 6.46
3024 3309 2.842069 GCGTGAATCTTGATACAACGCG 60.842 50.000 3.53 3.53 34.54 6.01
3025 3310 2.348666 AGCGTGAATCTTGATACAACGC 59.651 45.455 20.09 20.09 43.24 4.84
3026 3311 3.782250 GCAGCGTGAATCTTGATACAACG 60.782 47.826 7.71 7.71 0.00 4.10
3027 3312 3.485877 GGCAGCGTGAATCTTGATACAAC 60.486 47.826 0.00 0.00 0.00 3.32
3028 3313 2.677836 GGCAGCGTGAATCTTGATACAA 59.322 45.455 0.00 0.00 0.00 2.41
3029 3314 2.279741 GGCAGCGTGAATCTTGATACA 58.720 47.619 0.00 0.00 0.00 2.29
3030 3315 2.279741 TGGCAGCGTGAATCTTGATAC 58.720 47.619 0.00 0.00 0.00 2.24
3031 3316 2.554142 CTGGCAGCGTGAATCTTGATA 58.446 47.619 0.00 0.00 0.00 2.15
3121 3406 5.019785 ACTAATTAAAGTGCCCTCCGTAG 57.980 43.478 0.00 0.00 0.00 3.51
3122 3407 5.425196 AACTAATTAAAGTGCCCTCCGTA 57.575 39.130 0.00 0.00 0.00 4.02
3123 3408 3.994931 ACTAATTAAAGTGCCCTCCGT 57.005 42.857 0.00 0.00 0.00 4.69
3124 3409 6.292703 CGATAAACTAATTAAAGTGCCCTCCG 60.293 42.308 0.00 0.00 0.00 4.63
3125 3410 6.764560 TCGATAAACTAATTAAAGTGCCCTCC 59.235 38.462 0.00 0.00 0.00 4.30
3126 3411 7.279313 TGTCGATAAACTAATTAAAGTGCCCTC 59.721 37.037 0.00 0.00 0.00 4.30
3127 3412 7.065443 GTGTCGATAAACTAATTAAAGTGCCCT 59.935 37.037 0.00 0.00 0.00 5.19
3128 3413 7.065443 AGTGTCGATAAACTAATTAAAGTGCCC 59.935 37.037 0.00 0.00 0.00 5.36
3129 3414 7.971455 AGTGTCGATAAACTAATTAAAGTGCC 58.029 34.615 0.00 0.00 0.00 5.01
3137 3422 9.457436 ACCCAATTAAGTGTCGATAAACTAATT 57.543 29.630 1.80 0.00 0.00 1.40
3141 3426 9.760077 CTATACCCAATTAAGTGTCGATAAACT 57.240 33.333 1.80 0.00 0.00 2.66
3142 3427 9.538508 ACTATACCCAATTAAGTGTCGATAAAC 57.461 33.333 1.80 0.00 0.00 2.01
3145 3430 9.578576 ACTACTATACCCAATTAAGTGTCGATA 57.421 33.333 1.80 0.00 0.00 2.92
3146 3431 8.474710 ACTACTATACCCAATTAAGTGTCGAT 57.525 34.615 1.80 0.00 0.00 3.59
3147 3432 7.886629 ACTACTATACCCAATTAAGTGTCGA 57.113 36.000 1.80 0.00 0.00 4.20
3148 3433 8.623903 TGTACTACTATACCCAATTAAGTGTCG 58.376 37.037 1.80 0.00 0.00 4.35
3169 3454 9.751542 GATGTAGTGAGTAGCAAATTATGTACT 57.248 33.333 0.00 0.00 32.28 2.73
3170 3455 9.751542 AGATGTAGTGAGTAGCAAATTATGTAC 57.248 33.333 0.00 0.00 0.00 2.90
3171 3456 9.750125 CAGATGTAGTGAGTAGCAAATTATGTA 57.250 33.333 0.00 0.00 0.00 2.29
3172 3457 8.260818 ACAGATGTAGTGAGTAGCAAATTATGT 58.739 33.333 0.00 0.00 0.00 2.29
3173 3458 8.654230 ACAGATGTAGTGAGTAGCAAATTATG 57.346 34.615 0.00 0.00 0.00 1.90
3174 3459 9.751542 GTACAGATGTAGTGAGTAGCAAATTAT 57.248 33.333 0.00 0.00 0.00 1.28
3175 3460 8.745590 TGTACAGATGTAGTGAGTAGCAAATTA 58.254 33.333 0.00 0.00 0.00 1.40
3176 3461 7.611770 TGTACAGATGTAGTGAGTAGCAAATT 58.388 34.615 0.00 0.00 0.00 1.82
3177 3462 7.170393 TGTACAGATGTAGTGAGTAGCAAAT 57.830 36.000 0.00 0.00 0.00 2.32
3178 3463 6.584185 TGTACAGATGTAGTGAGTAGCAAA 57.416 37.500 0.00 0.00 0.00 3.68
3179 3464 5.393135 GCTGTACAGATGTAGTGAGTAGCAA 60.393 44.000 27.08 0.00 0.00 3.91
3180 3465 4.096532 GCTGTACAGATGTAGTGAGTAGCA 59.903 45.833 27.08 0.00 0.00 3.49
3181 3466 4.498345 GGCTGTACAGATGTAGTGAGTAGC 60.498 50.000 27.08 6.25 0.00 3.58
3182 3467 4.884744 AGGCTGTACAGATGTAGTGAGTAG 59.115 45.833 27.08 0.00 0.00 2.57
3183 3468 4.640647 CAGGCTGTACAGATGTAGTGAGTA 59.359 45.833 27.08 0.00 0.00 2.59
3184 3469 3.445450 CAGGCTGTACAGATGTAGTGAGT 59.555 47.826 27.08 0.00 0.00 3.41
3185 3470 3.445450 ACAGGCTGTACAGATGTAGTGAG 59.555 47.826 27.08 7.16 31.11 3.51
3186 3471 3.431415 ACAGGCTGTACAGATGTAGTGA 58.569 45.455 27.08 0.00 31.11 3.41
3187 3472 3.876274 ACAGGCTGTACAGATGTAGTG 57.124 47.619 27.08 14.24 31.11 2.74
3198 3483 2.475818 CAACAACGTGTACAGGCTGTA 58.524 47.619 22.96 22.96 0.00 2.74
3199 3484 1.295792 CAACAACGTGTACAGGCTGT 58.704 50.000 25.34 25.34 0.00 4.40
3200 3485 0.041312 GCAACAACGTGTACAGGCTG 60.041 55.000 14.16 14.16 0.00 4.85
3201 3486 0.462937 TGCAACAACGTGTACAGGCT 60.463 50.000 15.25 0.05 0.00 4.58
3202 3487 0.591170 ATGCAACAACGTGTACAGGC 59.409 50.000 15.25 2.73 0.00 4.85
3203 3488 2.096268 CAGATGCAACAACGTGTACAGG 60.096 50.000 13.84 13.84 0.00 4.00
3204 3489 2.543848 ACAGATGCAACAACGTGTACAG 59.456 45.455 0.00 0.00 0.00 2.74
3205 3490 2.556257 ACAGATGCAACAACGTGTACA 58.444 42.857 0.00 0.00 0.00 2.90
3206 3491 3.602390 AACAGATGCAACAACGTGTAC 57.398 42.857 0.00 0.00 0.00 2.90
3207 3492 5.933187 ATAAACAGATGCAACAACGTGTA 57.067 34.783 0.00 0.00 0.00 2.90
3208 3493 4.829064 ATAAACAGATGCAACAACGTGT 57.171 36.364 0.00 0.00 0.00 4.49
3209 3494 6.509317 AAAATAAACAGATGCAACAACGTG 57.491 33.333 0.00 0.00 0.00 4.49
3210 3495 8.079203 TGATAAAATAAACAGATGCAACAACGT 58.921 29.630 0.00 0.00 0.00 3.99
3211 3496 8.446489 TGATAAAATAAACAGATGCAACAACG 57.554 30.769 0.00 0.00 0.00 4.10
3213 3498 9.755804 TGTTGATAAAATAAACAGATGCAACAA 57.244 25.926 0.00 0.00 38.91 2.83
3214 3499 9.755804 TTGTTGATAAAATAAACAGATGCAACA 57.244 25.926 0.00 0.00 39.74 3.33
3217 3502 9.926158 ACATTGTTGATAAAATAAACAGATGCA 57.074 25.926 0.00 0.00 35.15 3.96
3250 3535 9.431887 GTGACTTTACACTGGAAGAATACATAA 57.568 33.333 0.00 0.00 37.43 1.90
3251 3536 8.590204 TGTGACTTTACACTGGAAGAATACATA 58.410 33.333 0.00 0.00 40.87 2.29
3252 3537 7.387948 GTGTGACTTTACACTGGAAGAATACAT 59.612 37.037 0.00 0.00 45.70 2.29
3253 3538 6.704493 GTGTGACTTTACACTGGAAGAATACA 59.296 38.462 0.00 0.00 45.70 2.29
3254 3539 7.118422 GTGTGACTTTACACTGGAAGAATAC 57.882 40.000 0.00 0.00 45.70 1.89
3266 3551 1.404748 TCGGTCGTGTGTGACTTTACA 59.595 47.619 0.00 0.00 38.91 2.41
3267 3552 2.124011 TCGGTCGTGTGTGACTTTAC 57.876 50.000 0.00 0.00 38.91 2.01
3268 3553 2.462889 GTTCGGTCGTGTGTGACTTTA 58.537 47.619 0.00 0.00 38.91 1.85
3269 3554 1.283736 GTTCGGTCGTGTGTGACTTT 58.716 50.000 0.00 0.00 38.91 2.66
3270 3555 0.529119 GGTTCGGTCGTGTGTGACTT 60.529 55.000 0.00 0.00 38.91 3.01
3271 3556 1.066918 GGTTCGGTCGTGTGTGACT 59.933 57.895 0.00 0.00 38.91 3.41
3272 3557 1.952635 GGGTTCGGTCGTGTGTGAC 60.953 63.158 0.00 0.00 38.17 3.67
3273 3558 0.822944 TAGGGTTCGGTCGTGTGTGA 60.823 55.000 0.00 0.00 0.00 3.58
3274 3559 0.245539 ATAGGGTTCGGTCGTGTGTG 59.754 55.000 0.00 0.00 0.00 3.82
3275 3560 1.838112 TATAGGGTTCGGTCGTGTGT 58.162 50.000 0.00 0.00 0.00 3.72
3276 3561 3.447918 AATATAGGGTTCGGTCGTGTG 57.552 47.619 0.00 0.00 0.00 3.82
3277 3562 4.161001 AGAAAATATAGGGTTCGGTCGTGT 59.839 41.667 0.00 0.00 0.00 4.49
3278 3563 4.690122 AGAAAATATAGGGTTCGGTCGTG 58.310 43.478 0.00 0.00 0.00 4.35
3279 3564 4.202192 GGAGAAAATATAGGGTTCGGTCGT 60.202 45.833 0.00 0.00 0.00 4.34
3280 3565 4.038883 AGGAGAAAATATAGGGTTCGGTCG 59.961 45.833 0.00 0.00 0.00 4.79
3281 3566 5.548181 AGGAGAAAATATAGGGTTCGGTC 57.452 43.478 0.00 0.00 0.00 4.79
3282 3567 5.306419 GGTAGGAGAAAATATAGGGTTCGGT 59.694 44.000 0.00 0.00 0.00 4.69
3283 3568 5.543020 AGGTAGGAGAAAATATAGGGTTCGG 59.457 44.000 0.00 0.00 0.00 4.30
3284 3569 6.494146 AGAGGTAGGAGAAAATATAGGGTTCG 59.506 42.308 0.00 0.00 0.00 3.95
3285 3570 7.859026 AGAGGTAGGAGAAAATATAGGGTTC 57.141 40.000 0.00 0.00 0.00 3.62
3286 3571 7.450944 CGTAGAGGTAGGAGAAAATATAGGGTT 59.549 40.741 0.00 0.00 0.00 4.11
3287 3572 6.947158 CGTAGAGGTAGGAGAAAATATAGGGT 59.053 42.308 0.00 0.00 0.00 4.34
3288 3573 7.173722 TCGTAGAGGTAGGAGAAAATATAGGG 58.826 42.308 0.00 0.00 0.00 3.53
3315 3600 3.047280 TTGCAACGGTAGCGGCAG 61.047 61.111 19.72 8.78 37.59 4.85
3316 3601 3.350612 GTTGCAACGGTAGCGGCA 61.351 61.111 19.72 16.10 33.85 5.69
3317 3602 3.023591 GAGTTGCAACGGTAGCGGC 62.024 63.158 23.21 13.57 33.85 6.53
3318 3603 2.388232 GGAGTTGCAACGGTAGCGG 61.388 63.158 23.21 2.54 33.85 5.52
3319 3604 2.726691 CGGAGTTGCAACGGTAGCG 61.727 63.158 23.21 13.69 33.85 4.26
3320 3605 3.023591 GCGGAGTTGCAACGGTAGC 62.024 63.158 23.21 21.37 34.15 3.58
3321 3606 2.388232 GGCGGAGTTGCAACGGTAG 61.388 63.158 23.21 16.36 36.28 3.18
3322 3607 2.357760 GGCGGAGTTGCAACGGTA 60.358 61.111 23.21 0.00 36.28 4.02
3323 3608 3.842925 ATGGCGGAGTTGCAACGGT 62.843 57.895 23.21 7.54 36.28 4.83
3324 3609 3.039202 GATGGCGGAGTTGCAACGG 62.039 63.158 23.21 17.05 36.28 4.44
3325 3610 2.480555 GATGGCGGAGTTGCAACG 59.519 61.111 23.21 13.40 36.28 4.10
3326 3611 2.480555 CGATGGCGGAGTTGCAAC 59.519 61.111 22.17 22.17 36.28 4.17
3327 3612 3.430862 GCGATGGCGGAGTTGCAA 61.431 61.111 0.00 0.00 38.16 4.08
3328 3613 4.695993 TGCGATGGCGGAGTTGCA 62.696 61.111 0.00 0.00 44.10 4.08
3329 3614 3.386867 CTTGCGATGGCGGAGTTGC 62.387 63.158 0.00 0.00 44.10 4.17
3330 3615 2.753966 CCTTGCGATGGCGGAGTTG 61.754 63.158 0.00 0.00 44.10 3.16
3331 3616 2.436646 CCTTGCGATGGCGGAGTT 60.437 61.111 0.00 0.00 44.10 3.01
3332 3617 3.665675 GACCTTGCGATGGCGGAGT 62.666 63.158 0.76 0.00 44.10 3.85
3333 3618 2.016393 TAGACCTTGCGATGGCGGAG 62.016 60.000 0.76 0.00 44.10 4.63
3334 3619 2.055633 TAGACCTTGCGATGGCGGA 61.056 57.895 0.76 0.00 44.10 5.54
3335 3620 1.883084 GTAGACCTTGCGATGGCGG 60.883 63.158 0.00 0.00 44.10 6.13
3336 3621 0.384309 TAGTAGACCTTGCGATGGCG 59.616 55.000 0.00 0.00 44.10 5.69
3337 3622 2.610727 GGATAGTAGACCTTGCGATGGC 60.611 54.545 0.00 0.00 40.52 4.40
3338 3623 2.628178 TGGATAGTAGACCTTGCGATGG 59.372 50.000 0.00 0.00 0.00 3.51
3339 3624 3.319405 AGTGGATAGTAGACCTTGCGATG 59.681 47.826 0.00 0.00 0.00 3.84
3340 3625 3.567397 AGTGGATAGTAGACCTTGCGAT 58.433 45.455 0.00 0.00 0.00 4.58
3341 3626 3.014304 AGTGGATAGTAGACCTTGCGA 57.986 47.619 0.00 0.00 0.00 5.10
3342 3627 4.519350 TCATAGTGGATAGTAGACCTTGCG 59.481 45.833 0.00 0.00 0.00 4.85
3343 3628 6.597832 ATCATAGTGGATAGTAGACCTTGC 57.402 41.667 0.00 0.00 0.00 4.01
3344 3629 8.637196 TGTATCATAGTGGATAGTAGACCTTG 57.363 38.462 0.00 0.00 30.73 3.61
3345 3630 9.656323 TTTGTATCATAGTGGATAGTAGACCTT 57.344 33.333 0.00 0.00 30.73 3.50
3346 3631 9.080097 GTTTGTATCATAGTGGATAGTAGACCT 57.920 37.037 0.00 0.00 30.73 3.85
3347 3632 8.857098 TGTTTGTATCATAGTGGATAGTAGACC 58.143 37.037 0.00 0.00 30.73 3.85
3348 3633 9.900710 CTGTTTGTATCATAGTGGATAGTAGAC 57.099 37.037 0.00 0.00 30.73 2.59
3349 3634 9.642343 ACTGTTTGTATCATAGTGGATAGTAGA 57.358 33.333 0.00 0.00 30.73 2.59
3352 3637 9.642343 TCTACTGTTTGTATCATAGTGGATAGT 57.358 33.333 0.00 0.00 30.73 2.12
3354 3639 8.577296 GCTCTACTGTTTGTATCATAGTGGATA 58.423 37.037 0.00 0.00 30.28 2.59
3355 3640 7.437748 GCTCTACTGTTTGTATCATAGTGGAT 58.562 38.462 0.00 0.00 30.28 3.41
3356 3641 6.459710 CGCTCTACTGTTTGTATCATAGTGGA 60.460 42.308 0.00 0.00 0.00 4.02
3357 3642 5.687730 CGCTCTACTGTTTGTATCATAGTGG 59.312 44.000 0.00 0.00 0.00 4.00
3358 3643 6.495706 TCGCTCTACTGTTTGTATCATAGTG 58.504 40.000 0.00 0.00 0.00 2.74
3359 3644 6.694877 TCGCTCTACTGTTTGTATCATAGT 57.305 37.500 0.00 0.00 0.00 2.12
3360 3645 7.862873 TGATTCGCTCTACTGTTTGTATCATAG 59.137 37.037 0.00 0.00 0.00 2.23
3361 3646 7.712797 TGATTCGCTCTACTGTTTGTATCATA 58.287 34.615 0.00 0.00 0.00 2.15
3362 3647 6.573434 TGATTCGCTCTACTGTTTGTATCAT 58.427 36.000 0.00 0.00 0.00 2.45
3363 3648 5.961272 TGATTCGCTCTACTGTTTGTATCA 58.039 37.500 0.00 0.00 0.00 2.15
3364 3649 6.887376 TTGATTCGCTCTACTGTTTGTATC 57.113 37.500 0.00 0.00 0.00 2.24
3365 3650 6.092259 GGTTTGATTCGCTCTACTGTTTGTAT 59.908 38.462 0.00 0.00 0.00 2.29
3366 3651 5.407387 GGTTTGATTCGCTCTACTGTTTGTA 59.593 40.000 0.00 0.00 0.00 2.41
3367 3652 4.213482 GGTTTGATTCGCTCTACTGTTTGT 59.787 41.667 0.00 0.00 0.00 2.83
3368 3653 4.378459 GGGTTTGATTCGCTCTACTGTTTG 60.378 45.833 0.00 0.00 0.00 2.93
3369 3654 3.751698 GGGTTTGATTCGCTCTACTGTTT 59.248 43.478 0.00 0.00 0.00 2.83
3370 3655 3.008049 AGGGTTTGATTCGCTCTACTGTT 59.992 43.478 0.00 0.00 0.00 3.16
3371 3656 2.567615 AGGGTTTGATTCGCTCTACTGT 59.432 45.455 0.00 0.00 0.00 3.55
3372 3657 3.190874 GAGGGTTTGATTCGCTCTACTG 58.809 50.000 0.00 0.00 40.25 2.74
3373 3658 2.832129 TGAGGGTTTGATTCGCTCTACT 59.168 45.455 10.34 0.00 42.63 2.57
3374 3659 3.247006 TGAGGGTTTGATTCGCTCTAC 57.753 47.619 10.34 0.00 42.63 2.59
3375 3660 3.260884 ACTTGAGGGTTTGATTCGCTCTA 59.739 43.478 10.34 3.66 42.63 2.43
3376 3661 2.039084 ACTTGAGGGTTTGATTCGCTCT 59.961 45.455 10.34 0.00 42.63 4.09
3377 3662 2.416893 GACTTGAGGGTTTGATTCGCTC 59.583 50.000 0.00 0.00 42.54 5.03
3378 3663 2.427506 GACTTGAGGGTTTGATTCGCT 58.572 47.619 0.00 0.00 0.00 4.93
3379 3664 1.468914 GGACTTGAGGGTTTGATTCGC 59.531 52.381 0.00 0.00 0.00 4.70
3380 3665 2.744202 CTGGACTTGAGGGTTTGATTCG 59.256 50.000 0.00 0.00 0.00 3.34
3381 3666 4.021102 TCTGGACTTGAGGGTTTGATTC 57.979 45.455 0.00 0.00 0.00 2.52
3382 3667 4.664688 ATCTGGACTTGAGGGTTTGATT 57.335 40.909 0.00 0.00 0.00 2.57
3383 3668 4.568592 GGAATCTGGACTTGAGGGTTTGAT 60.569 45.833 0.00 0.00 0.00 2.57
3384 3669 3.244911 GGAATCTGGACTTGAGGGTTTGA 60.245 47.826 0.00 0.00 0.00 2.69
3385 3670 3.084786 GGAATCTGGACTTGAGGGTTTG 58.915 50.000 0.00 0.00 0.00 2.93
3386 3671 2.290323 CGGAATCTGGACTTGAGGGTTT 60.290 50.000 0.00 0.00 0.00 3.27
3387 3672 1.279271 CGGAATCTGGACTTGAGGGTT 59.721 52.381 0.00 0.00 0.00 4.11
3388 3673 0.905357 CGGAATCTGGACTTGAGGGT 59.095 55.000 0.00 0.00 0.00 4.34
3389 3674 0.179000 CCGGAATCTGGACTTGAGGG 59.821 60.000 0.74 0.00 0.00 4.30
3390 3675 0.905357 ACCGGAATCTGGACTTGAGG 59.095 55.000 16.23 0.00 0.00 3.86
3391 3676 1.469940 CGACCGGAATCTGGACTTGAG 60.470 57.143 16.23 0.00 0.00 3.02
3392 3677 0.530744 CGACCGGAATCTGGACTTGA 59.469 55.000 16.23 0.00 0.00 3.02
3393 3678 0.246635 ACGACCGGAATCTGGACTTG 59.753 55.000 16.23 0.00 0.00 3.16
3394 3679 0.974383 AACGACCGGAATCTGGACTT 59.026 50.000 16.23 0.00 0.00 3.01
3395 3680 0.974383 AAACGACCGGAATCTGGACT 59.026 50.000 16.23 0.00 0.00 3.85
3396 3681 1.337447 TGAAACGACCGGAATCTGGAC 60.337 52.381 16.23 7.90 0.00 4.02
3397 3682 0.970640 TGAAACGACCGGAATCTGGA 59.029 50.000 16.23 0.00 0.00 3.86
3398 3683 1.463444 GTTGAAACGACCGGAATCTGG 59.537 52.381 9.46 6.56 0.00 3.86
3399 3684 1.463444 GGTTGAAACGACCGGAATCTG 59.537 52.381 9.46 0.00 0.00 2.90
3400 3685 1.609841 GGGTTGAAACGACCGGAATCT 60.610 52.381 9.46 0.00 38.08 2.40
3401 3686 0.800631 GGGTTGAAACGACCGGAATC 59.199 55.000 9.46 0.00 38.08 2.52
3402 3687 0.399075 AGGGTTGAAACGACCGGAAT 59.601 50.000 9.46 0.00 38.08 3.01
3403 3688 0.533308 CAGGGTTGAAACGACCGGAA 60.533 55.000 9.46 0.00 38.08 4.30
3404 3689 1.070105 CAGGGTTGAAACGACCGGA 59.930 57.895 9.46 0.00 38.08 5.14
3405 3690 0.533308 TTCAGGGTTGAAACGACCGG 60.533 55.000 0.00 0.00 40.26 5.28
3406 3691 1.301423 TTTCAGGGTTGAAACGACCG 58.699 50.000 0.00 0.00 45.77 4.79
3413 3698 7.172342 CCGGGATTATATATTTCAGGGTTGAA 58.828 38.462 0.00 0.00 41.44 2.69
3414 3699 6.273730 ACCGGGATTATATATTTCAGGGTTGA 59.726 38.462 6.32 0.00 0.00 3.18
3415 3700 6.481643 ACCGGGATTATATATTTCAGGGTTG 58.518 40.000 6.32 0.00 0.00 3.77
3416 3701 6.504279 AGACCGGGATTATATATTTCAGGGTT 59.496 38.462 6.32 0.00 0.00 4.11
3417 3702 6.030082 AGACCGGGATTATATATTTCAGGGT 58.970 40.000 6.32 6.93 0.00 4.34
3418 3703 6.561519 AGACCGGGATTATATATTTCAGGG 57.438 41.667 6.32 4.60 0.00 4.45
3425 3710 9.901172 GGTTTGATTTAGACCGGGATTATATAT 57.099 33.333 6.32 0.00 0.00 0.86
3426 3711 8.323567 GGGTTTGATTTAGACCGGGATTATATA 58.676 37.037 6.32 0.00 34.22 0.86
3427 3712 7.018249 AGGGTTTGATTTAGACCGGGATTATAT 59.982 37.037 6.32 0.00 34.22 0.86
3428 3713 6.330778 AGGGTTTGATTTAGACCGGGATTATA 59.669 38.462 6.32 0.00 34.22 0.98
3429 3714 5.133830 AGGGTTTGATTTAGACCGGGATTAT 59.866 40.000 6.32 0.00 34.22 1.28
3430 3715 4.475747 AGGGTTTGATTTAGACCGGGATTA 59.524 41.667 6.32 0.00 34.22 1.75
3431 3716 3.268595 AGGGTTTGATTTAGACCGGGATT 59.731 43.478 6.32 0.00 34.22 3.01
3432 3717 2.850568 AGGGTTTGATTTAGACCGGGAT 59.149 45.455 6.32 0.00 34.22 3.85
3433 3718 2.026636 CAGGGTTTGATTTAGACCGGGA 60.027 50.000 6.32 0.00 34.22 5.14
3434 3719 2.365582 CAGGGTTTGATTTAGACCGGG 58.634 52.381 6.32 0.00 34.22 5.73
3435 3720 2.026636 TCCAGGGTTTGATTTAGACCGG 60.027 50.000 0.00 0.00 34.22 5.28
3436 3721 3.270877 CTCCAGGGTTTGATTTAGACCG 58.729 50.000 0.00 0.00 34.22 4.79
3437 3722 4.262617 GACTCCAGGGTTTGATTTAGACC 58.737 47.826 0.00 0.00 0.00 3.85
3438 3723 3.933332 CGACTCCAGGGTTTGATTTAGAC 59.067 47.826 0.00 0.00 0.00 2.59
3439 3724 3.581332 ACGACTCCAGGGTTTGATTTAGA 59.419 43.478 0.00 0.00 0.00 2.10
3440 3725 3.939066 ACGACTCCAGGGTTTGATTTAG 58.061 45.455 0.00 0.00 0.00 1.85
3441 3726 4.360951 AACGACTCCAGGGTTTGATTTA 57.639 40.909 0.00 0.00 0.00 1.40
3442 3727 2.951229 ACGACTCCAGGGTTTGATTT 57.049 45.000 0.00 0.00 0.00 2.17
3443 3728 2.951229 AACGACTCCAGGGTTTGATT 57.049 45.000 0.00 0.00 0.00 2.57
3444 3729 2.951229 AAACGACTCCAGGGTTTGAT 57.049 45.000 0.00 0.00 33.01 2.57
3447 3732 0.822121 GGCAAACGACTCCAGGGTTT 60.822 55.000 0.00 0.00 34.42 3.27
3448 3733 1.228154 GGCAAACGACTCCAGGGTT 60.228 57.895 0.00 0.00 0.00 4.11
3449 3734 2.397413 CTGGCAAACGACTCCAGGGT 62.397 60.000 0.00 0.00 42.70 4.34
3450 3735 1.672356 CTGGCAAACGACTCCAGGG 60.672 63.158 0.00 0.00 42.70 4.45
3451 3736 0.951040 GTCTGGCAAACGACTCCAGG 60.951 60.000 14.24 0.00 45.58 4.45
3452 3737 0.249868 TGTCTGGCAAACGACTCCAG 60.250 55.000 6.87 10.08 46.60 3.86
3453 3738 0.179234 TTGTCTGGCAAACGACTCCA 59.821 50.000 6.87 0.00 33.53 3.86
3454 3739 0.868406 CTTGTCTGGCAAACGACTCC 59.132 55.000 6.87 0.00 36.53 3.85
3455 3740 0.868406 CCTTGTCTGGCAAACGACTC 59.132 55.000 6.87 0.00 36.53 3.36
3456 3741 0.468226 TCCTTGTCTGGCAAACGACT 59.532 50.000 6.87 0.00 36.53 4.18
3457 3742 1.523758 ATCCTTGTCTGGCAAACGAC 58.476 50.000 0.00 0.00 36.53 4.34
3458 3743 2.270352 AATCCTTGTCTGGCAAACGA 57.730 45.000 0.00 0.00 36.53 3.85
3459 3744 2.159707 CGTAATCCTTGTCTGGCAAACG 60.160 50.000 2.36 2.36 36.53 3.60
3460 3745 3.071479 TCGTAATCCTTGTCTGGCAAAC 58.929 45.455 0.00 0.00 36.53 2.93
3461 3746 3.410631 TCGTAATCCTTGTCTGGCAAA 57.589 42.857 0.00 0.00 36.53 3.68
3462 3747 3.007506 TCTTCGTAATCCTTGTCTGGCAA 59.992 43.478 0.00 0.00 35.50 4.52
3463 3748 2.565391 TCTTCGTAATCCTTGTCTGGCA 59.435 45.455 0.00 0.00 0.00 4.92
3464 3749 3.247006 TCTTCGTAATCCTTGTCTGGC 57.753 47.619 0.00 0.00 0.00 4.85
3465 3750 4.572389 CCATTCTTCGTAATCCTTGTCTGG 59.428 45.833 0.00 0.00 0.00 3.86
3466 3751 4.034510 GCCATTCTTCGTAATCCTTGTCTG 59.965 45.833 0.00 0.00 0.00 3.51
3467 3752 4.192317 GCCATTCTTCGTAATCCTTGTCT 58.808 43.478 0.00 0.00 0.00 3.41
3468 3753 3.312697 GGCCATTCTTCGTAATCCTTGTC 59.687 47.826 0.00 0.00 0.00 3.18
3469 3754 3.279434 GGCCATTCTTCGTAATCCTTGT 58.721 45.455 0.00 0.00 0.00 3.16
3470 3755 2.287915 CGGCCATTCTTCGTAATCCTTG 59.712 50.000 2.24 0.00 0.00 3.61
3471 3756 2.561569 CGGCCATTCTTCGTAATCCTT 58.438 47.619 2.24 0.00 0.00 3.36
3472 3757 1.202651 CCGGCCATTCTTCGTAATCCT 60.203 52.381 2.24 0.00 0.00 3.24
3473 3758 1.226746 CCGGCCATTCTTCGTAATCC 58.773 55.000 2.24 0.00 0.00 3.01
3474 3759 1.202604 TCCCGGCCATTCTTCGTAATC 60.203 52.381 2.24 0.00 0.00 1.75
3475 3760 0.834612 TCCCGGCCATTCTTCGTAAT 59.165 50.000 2.24 0.00 0.00 1.89
3476 3761 0.834612 ATCCCGGCCATTCTTCGTAA 59.165 50.000 2.24 0.00 0.00 3.18
3477 3762 0.834612 AATCCCGGCCATTCTTCGTA 59.165 50.000 2.24 0.00 0.00 3.43
3478 3763 0.748005 CAATCCCGGCCATTCTTCGT 60.748 55.000 2.24 0.00 0.00 3.85
3479 3764 1.447317 CCAATCCCGGCCATTCTTCG 61.447 60.000 2.24 0.00 0.00 3.79
3480 3765 0.395724 ACCAATCCCGGCCATTCTTC 60.396 55.000 2.24 0.00 0.00 2.87
3481 3766 0.684153 CACCAATCCCGGCCATTCTT 60.684 55.000 2.24 0.00 0.00 2.52
3482 3767 1.076777 CACCAATCCCGGCCATTCT 60.077 57.895 2.24 0.00 0.00 2.40
3483 3768 2.127232 CCACCAATCCCGGCCATTC 61.127 63.158 2.24 0.00 0.00 2.67
3484 3769 2.043046 CCACCAATCCCGGCCATT 60.043 61.111 2.24 0.00 0.00 3.16
3485 3770 4.839706 GCCACCAATCCCGGCCAT 62.840 66.667 2.24 0.00 40.07 4.40
3489 3774 3.714487 AATCCGCCACCAATCCCGG 62.714 63.158 0.00 0.00 41.97 5.73
3490 3775 2.124320 AATCCGCCACCAATCCCG 60.124 61.111 0.00 0.00 0.00 5.14
3491 3776 1.828224 GGAATCCGCCACCAATCCC 60.828 63.158 0.00 0.00 0.00 3.85
3492 3777 0.472471 TAGGAATCCGCCACCAATCC 59.528 55.000 0.00 0.00 0.00 3.01
3493 3778 2.568623 ATAGGAATCCGCCACCAATC 57.431 50.000 0.00 0.00 0.00 2.67
3494 3779 2.958355 CAAATAGGAATCCGCCACCAAT 59.042 45.455 0.00 0.00 0.00 3.16
3495 3780 2.374184 CAAATAGGAATCCGCCACCAA 58.626 47.619 0.00 0.00 0.00 3.67
3496 3781 2.021723 GCAAATAGGAATCCGCCACCA 61.022 52.381 0.00 0.00 0.00 4.17
3497 3782 0.668535 GCAAATAGGAATCCGCCACC 59.331 55.000 0.00 0.00 0.00 4.61
3498 3783 0.668535 GGCAAATAGGAATCCGCCAC 59.331 55.000 9.77 0.00 39.38 5.01
3499 3784 0.817634 CGGCAAATAGGAATCCGCCA 60.818 55.000 14.04 0.00 39.56 5.69
3500 3785 1.949257 CGGCAAATAGGAATCCGCC 59.051 57.895 5.23 5.23 36.16 6.13
3502 3787 1.515521 GGGCGGCAAATAGGAATCCG 61.516 60.000 12.47 0.00 42.68 4.18
3503 3788 1.515521 CGGGCGGCAAATAGGAATCC 61.516 60.000 12.47 0.00 0.00 3.01
3504 3789 0.818040 ACGGGCGGCAAATAGGAATC 60.818 55.000 12.47 0.00 0.00 2.52
3505 3790 1.101049 CACGGGCGGCAAATAGGAAT 61.101 55.000 12.47 0.00 0.00 3.01
3506 3791 1.747367 CACGGGCGGCAAATAGGAA 60.747 57.895 12.47 0.00 0.00 3.36
3507 3792 2.124901 CACGGGCGGCAAATAGGA 60.125 61.111 12.47 0.00 0.00 2.94
3508 3793 3.209097 CCACGGGCGGCAAATAGG 61.209 66.667 12.47 0.65 0.00 2.57
3509 3794 3.209097 CCCACGGGCGGCAAATAG 61.209 66.667 12.47 0.00 0.00 1.73
3519 3804 3.673484 CTGTTTGCTGCCCACGGG 61.673 66.667 0.00 0.00 38.57 5.28
3520 3805 4.347453 GCTGTTTGCTGCCCACGG 62.347 66.667 0.00 0.00 38.95 4.94
3521 3806 3.547249 CTGCTGTTTGCTGCCCACG 62.547 63.158 0.00 0.00 43.37 4.94
3522 3807 2.337532 CTGCTGTTTGCTGCCCAC 59.662 61.111 0.00 0.00 43.37 4.61
3523 3808 2.123769 ACTGCTGTTTGCTGCCCA 60.124 55.556 0.00 0.00 43.25 5.36
3524 3809 2.337532 CACTGCTGTTTGCTGCCC 59.662 61.111 0.00 0.00 43.25 5.36
3525 3810 2.337532 CCACTGCTGTTTGCTGCC 59.662 61.111 0.00 0.00 43.25 4.85
3526 3811 2.355481 GCCACTGCTGTTTGCTGC 60.355 61.111 7.51 0.00 43.25 5.25


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.