Multiple sequence alignment - TraesCS1D01G092300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G092300 chr1D 100.000 3857 0 0 1 3857 78974344 78978200 0.000000e+00 7123.0
1 TraesCS1D01G092300 chr1D 86.396 419 27 11 3451 3856 470591569 470591168 7.660000e-117 431.0
2 TraesCS1D01G092300 chr1D 90.698 86 7 1 3305 3390 332935696 332935612 3.150000e-21 113.0
3 TraesCS1D01G092300 chr1D 90.789 76 1 1 3044 3119 78977321 78977390 3.170000e-16 97.1
4 TraesCS1D01G092300 chr1D 90.789 76 1 1 2978 3047 78977387 78977462 3.170000e-16 97.1
5 TraesCS1D01G092300 chr1D 97.368 38 0 1 3301 3337 96922318 96922281 3.220000e-06 63.9
6 TraesCS1D01G092300 chr1B 94.970 3042 139 10 10 3047 123960926 123963957 0.000000e+00 4758.0
7 TraesCS1D01G092300 chr1B 93.069 404 13 5 3044 3442 123963888 123964281 9.290000e-161 577.0
8 TraesCS1D01G092300 chr1B 90.632 427 26 7 3444 3857 412258568 412258993 4.350000e-154 555.0
9 TraesCS1D01G092300 chr1A 95.744 2138 84 5 910 3047 96477827 96475697 0.000000e+00 3437.0
10 TraesCS1D01G092300 chr1A 87.202 672 72 10 11 673 96480164 96479498 0.000000e+00 752.0
11 TraesCS1D01G092300 chr1A 86.700 406 9 12 3044 3442 96475766 96475399 3.590000e-110 409.0
12 TraesCS1D01G092300 chr1A 97.368 38 0 1 3301 3337 91504037 91504074 3.220000e-06 63.9
13 TraesCS1D01G092300 chr5B 90.632 427 26 7 3444 3857 641041221 641041646 4.350000e-154 555.0
14 TraesCS1D01G092300 chr5B 80.000 340 56 11 22 356 501469925 501469593 1.380000e-59 241.0
15 TraesCS1D01G092300 chr4A 90.398 427 27 7 3444 3857 546014561 546014136 2.030000e-152 549.0
16 TraesCS1D01G092300 chr4A 85.955 178 21 4 3444 3618 237101250 237101074 1.830000e-43 187.0
17 TraesCS1D01G092300 chr4A 88.636 88 8 1 3303 3390 605730309 605730224 5.270000e-19 106.0
18 TraesCS1D01G092300 chr6B 88.140 430 32 12 3441 3857 209373023 209373446 9.630000e-136 494.0
19 TraesCS1D01G092300 chr6B 81.994 311 43 7 3444 3747 492017933 492017629 6.400000e-63 252.0
20 TraesCS1D01G092300 chr5D 85.876 177 22 3 3444 3618 488191100 488190925 6.580000e-43 185.0
21 TraesCS1D01G092300 chr2D 83.333 204 30 3 3444 3643 332341113 332340910 6.580000e-43 185.0
22 TraesCS1D01G092300 chr7A 90.816 98 6 3 3293 3390 398924422 398924516 1.120000e-25 128.0
23 TraesCS1D01G092300 chr3A 91.860 86 6 1 3305 3390 700747626 700747710 6.770000e-23 119.0
24 TraesCS1D01G092300 chr7D 89.873 79 7 1 3304 3382 78305982 78306059 2.450000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G092300 chr1D 78974344 78978200 3856 False 2439.066667 7123 93.859333 1 3857 3 chr1D.!!$F1 3856
1 TraesCS1D01G092300 chr1B 123960926 123964281 3355 False 2667.500000 4758 94.019500 10 3442 2 chr1B.!!$F2 3432
2 TraesCS1D01G092300 chr1A 96475399 96480164 4765 True 1532.666667 3437 89.882000 11 3442 3 chr1A.!!$R1 3431

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
415 422 0.108615 CCGCTGTGTCGAAAGGATCT 60.109 55.000 0.0 0.0 0.0 2.75 F
1044 2487 1.213013 CGCACTCCTCAACTACGCT 59.787 57.895 0.0 0.0 0.0 5.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1773 3216 1.663379 CTACATGGAGGTCGGTCGCA 61.663 60.0 0.0 0.0 0.00 5.10 R
2862 4305 0.037326 AGTATGCACACACCAGACGG 60.037 55.0 0.0 0.0 38.77 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 70 2.027605 CCGCATACGTCCGCTGAT 59.972 61.111 0.00 0.00 37.70 2.90
66 71 2.302952 CCGCATACGTCCGCTGATG 61.303 63.158 0.00 0.00 37.70 3.07
73 78 2.261671 GTCCGCTGATGTGTCCGT 59.738 61.111 0.00 0.00 0.00 4.69
88 93 1.950909 GTCCGTGTGTTCAAAATCCCA 59.049 47.619 0.00 0.00 0.00 4.37
172 177 0.540830 CAATCCCGGTCCACCCAAAA 60.541 55.000 0.00 0.00 0.00 2.44
180 185 0.114364 GTCCACCCAAAATCCCCACT 59.886 55.000 0.00 0.00 0.00 4.00
199 204 2.676471 GGAGCCCGCACATTTGGT 60.676 61.111 0.00 0.00 0.00 3.67
230 235 4.572571 TTTCCGCACCAAGCCCGT 62.573 61.111 0.00 0.00 41.38 5.28
247 252 1.001641 GTGCATTGCCACCCTCTCT 60.002 57.895 6.12 0.00 0.00 3.10
251 256 0.835941 CATTGCCACCCTCTCTAGCT 59.164 55.000 0.00 0.00 0.00 3.32
257 262 1.686355 CACCCTCTCTAGCTGATCGT 58.314 55.000 0.00 0.00 0.00 3.73
299 305 3.475774 CCTTTTCGTCGTCCGCCG 61.476 66.667 0.00 0.00 36.19 6.46
321 327 1.363807 CATGGATCCGCTCGTAGCA 59.636 57.895 7.39 0.00 42.58 3.49
337 343 2.586245 CATTGCTGGAGCCGGAGA 59.414 61.111 5.05 0.00 41.18 3.71
415 422 0.108615 CCGCTGTGTCGAAAGGATCT 60.109 55.000 0.00 0.00 0.00 2.75
417 424 2.223829 CCGCTGTGTCGAAAGGATCTAT 60.224 50.000 0.00 0.00 0.00 1.98
476 483 7.439655 GGATGATCGTTAAGTTAGAAAGCTCAT 59.560 37.037 0.00 0.00 0.00 2.90
508 515 3.119291 GAGTATTCGTCTGCTCATGTGG 58.881 50.000 0.00 0.00 0.00 4.17
524 531 5.953183 TCATGTGGTCTGCATGATTTTAAC 58.047 37.500 0.00 0.00 45.18 2.01
960 2403 6.460399 CGGAAATTAATAATCTTCCCCGCAAA 60.460 38.462 9.92 0.00 34.96 3.68
961 2404 7.269316 GGAAATTAATAATCTTCCCCGCAAAA 58.731 34.615 5.62 0.00 32.71 2.44
962 2405 7.766738 GGAAATTAATAATCTTCCCCGCAAAAA 59.233 33.333 5.62 0.00 32.71 1.94
1029 2472 1.976474 GAAAATGGCTGTCCCCGCA 60.976 57.895 0.00 0.00 0.00 5.69
1044 2487 1.213013 CGCACTCCTCAACTACGCT 59.787 57.895 0.00 0.00 0.00 5.07
1128 2571 2.654912 CGCCACCGTCGTCAAGAAC 61.655 63.158 0.00 0.00 0.00 3.01
1773 3216 3.562176 CCCTTATTGTGAAGGCTGGACTT 60.562 47.826 0.00 0.00 44.15 3.01
1854 3297 2.289945 GGAGGATGCTCTGAGTGTGTTT 60.290 50.000 14.40 0.00 0.00 2.83
1967 3410 1.900351 CTGAGATGGCGGGTGAAGA 59.100 57.895 0.00 0.00 0.00 2.87
1971 3414 1.943340 GAGATGGCGGGTGAAGAAATC 59.057 52.381 0.00 0.00 0.00 2.17
2583 4026 1.062488 AGTTGCTCCTTGTGGACCCT 61.062 55.000 0.00 0.00 37.46 4.34
2784 4227 1.337635 CCTGACTCTGCTCCTGTTGAC 60.338 57.143 0.00 0.00 0.00 3.18
2823 4266 1.915614 CTGCAGTTGCCGGTGATCAC 61.916 60.000 17.91 17.91 41.18 3.06
2843 4286 2.174210 ACCAGGATGATGTGATGGAAGG 59.826 50.000 0.00 0.00 39.69 3.46
2862 4305 0.179119 GCAATGCTCTGTGAATGGGC 60.179 55.000 0.00 0.00 0.00 5.36
2869 4312 1.746615 CTGTGAATGGGCCGTCTGG 60.747 63.158 0.00 0.00 38.77 3.86
2897 4340 4.095334 TGCATACTTGATTCTGATGCACAC 59.905 41.667 3.84 0.00 45.86 3.82
2900 4343 4.494350 ACTTGATTCTGATGCACACAAC 57.506 40.909 0.00 0.00 0.00 3.32
2905 4348 4.095334 TGATTCTGATGCACACAACATAGC 59.905 41.667 0.00 0.00 0.00 2.97
2926 4369 3.243907 GCGAAGGCTACTTACTCCATGAT 60.244 47.826 0.00 0.00 36.97 2.45
2946 4389 1.452651 ATGGCCTTCATGGTGAGCG 60.453 57.895 3.32 0.00 38.35 5.03
2997 4440 7.825761 TCTTCAATCACACTGTTATGATGACAT 59.174 33.333 5.35 0.00 35.71 3.06
2998 4441 7.311364 TCAATCACACTGTTATGATGACATG 57.689 36.000 0.00 0.00 35.71 3.21
2999 4442 6.316890 TCAATCACACTGTTATGATGACATGG 59.683 38.462 0.00 0.00 35.71 3.66
3000 4443 4.516323 TCACACTGTTATGATGACATGGG 58.484 43.478 0.00 0.00 37.87 4.00
3001 4444 3.065786 CACACTGTTATGATGACATGGGC 59.934 47.826 0.00 0.00 37.87 5.36
3002 4445 3.281158 CACTGTTATGATGACATGGGCA 58.719 45.455 0.00 0.00 37.87 5.36
3003 4446 3.887110 CACTGTTATGATGACATGGGCAT 59.113 43.478 0.00 0.00 37.87 4.40
3004 4447 3.887110 ACTGTTATGATGACATGGGCATG 59.113 43.478 7.90 0.00 44.15 4.06
3005 4448 3.224269 TGTTATGATGACATGGGCATGG 58.776 45.455 7.90 0.00 42.91 3.66
3006 4449 3.117587 TGTTATGATGACATGGGCATGGA 60.118 43.478 7.90 0.00 42.91 3.41
3007 4450 1.991121 ATGATGACATGGGCATGGAC 58.009 50.000 7.90 0.00 42.91 4.02
3008 4451 0.624785 TGATGACATGGGCATGGACA 59.375 50.000 7.90 0.00 42.91 4.02
3009 4452 1.027357 GATGACATGGGCATGGACAC 58.973 55.000 7.90 0.00 42.91 3.67
3010 4453 0.749091 ATGACATGGGCATGGACACG 60.749 55.000 0.00 0.00 42.91 4.49
3011 4454 1.377202 GACATGGGCATGGACACGT 60.377 57.895 0.00 0.00 42.91 4.49
3012 4455 0.107897 GACATGGGCATGGACACGTA 60.108 55.000 0.00 0.00 42.91 3.57
3013 4456 0.546122 ACATGGGCATGGACACGTAT 59.454 50.000 0.00 0.00 42.91 3.06
3014 4457 0.946528 CATGGGCATGGACACGTATG 59.053 55.000 0.00 0.00 35.24 2.39
3015 4458 0.819259 ATGGGCATGGACACGTATGC 60.819 55.000 11.72 11.72 46.76 3.14
3016 4459 1.153168 GGGCATGGACACGTATGCT 60.153 57.895 17.88 0.00 46.69 3.79
3017 4460 0.748005 GGGCATGGACACGTATGCTT 60.748 55.000 17.88 0.00 46.69 3.91
3018 4461 0.657840 GGCATGGACACGTATGCTTC 59.342 55.000 17.88 2.17 46.69 3.86
3019 4462 1.368641 GCATGGACACGTATGCTTCA 58.631 50.000 12.66 0.00 44.70 3.02
3020 4463 1.942657 GCATGGACACGTATGCTTCAT 59.057 47.619 12.66 0.00 44.70 2.57
3021 4464 2.286595 GCATGGACACGTATGCTTCATG 60.287 50.000 12.66 10.17 44.70 3.07
3022 4465 2.022764 TGGACACGTATGCTTCATGG 57.977 50.000 0.00 0.00 0.00 3.66
3023 4466 0.657840 GGACACGTATGCTTCATGGC 59.342 55.000 0.00 0.00 0.00 4.40
3024 4467 0.301687 GACACGTATGCTTCATGGCG 59.698 55.000 0.00 0.00 34.52 5.69
3025 4468 0.108377 ACACGTATGCTTCATGGCGA 60.108 50.000 10.68 0.00 34.52 5.54
3026 4469 0.578683 CACGTATGCTTCATGGCGAG 59.421 55.000 10.68 0.00 34.52 5.03
3027 4470 0.175760 ACGTATGCTTCATGGCGAGT 59.824 50.000 10.68 0.00 34.52 4.18
3028 4471 0.578683 CGTATGCTTCATGGCGAGTG 59.421 55.000 0.00 0.00 34.52 3.51
3029 4472 0.940126 GTATGCTTCATGGCGAGTGG 59.060 55.000 0.00 0.00 34.52 4.00
3030 4473 0.815213 TATGCTTCATGGCGAGTGGC 60.815 55.000 0.00 0.00 42.51 5.01
3031 4474 3.869272 GCTTCATGGCGAGTGGCG 61.869 66.667 0.00 0.00 44.92 5.69
3040 4483 4.988598 CGAGTGGCGCCCAAGTGT 62.989 66.667 26.77 0.77 34.18 3.55
3041 4484 3.357079 GAGTGGCGCCCAAGTGTG 61.357 66.667 26.77 0.00 34.18 3.82
3042 4485 4.954970 AGTGGCGCCCAAGTGTGG 62.955 66.667 26.77 0.00 45.53 4.17
3061 4504 5.725110 GTGGATCACACTGTTATGATGAC 57.275 43.478 8.62 3.23 46.72 3.06
3062 4505 5.178061 GTGGATCACACTGTTATGATGACA 58.822 41.667 8.62 5.72 46.72 3.58
3063 4506 5.819379 GTGGATCACACTGTTATGATGACAT 59.181 40.000 8.62 0.00 46.72 3.06
3064 4507 5.818857 TGGATCACACTGTTATGATGACATG 59.181 40.000 8.62 0.00 35.67 3.21
3065 4508 5.237996 GGATCACACTGTTATGATGACATGG 59.762 44.000 8.62 0.00 35.67 3.66
3066 4509 4.516323 TCACACTGTTATGATGACATGGG 58.484 43.478 0.00 0.00 37.87 4.00
3067 4510 3.065786 CACACTGTTATGATGACATGGGC 59.934 47.826 0.00 0.00 37.87 5.36
3068 4511 3.281158 CACTGTTATGATGACATGGGCA 58.719 45.455 0.00 0.00 37.87 5.36
3206 4649 1.819632 GGTGGATTGGTAGCGCCTG 60.820 63.158 2.29 0.00 38.35 4.85
3207 4650 1.819632 GTGGATTGGTAGCGCCTGG 60.820 63.158 2.29 0.00 38.35 4.45
3208 4651 1.992834 TGGATTGGTAGCGCCTGGA 60.993 57.895 2.29 0.00 38.35 3.86
3209 4652 1.227674 GGATTGGTAGCGCCTGGAG 60.228 63.158 2.29 0.00 38.35 3.86
3271 4718 3.189287 ACAACGCCATCAAAGAAGATCAC 59.811 43.478 0.00 0.00 0.00 3.06
3453 4905 1.569708 AAAACATGCGGCTGTGTTTG 58.430 45.000 25.90 8.95 45.05 2.93
3454 4906 0.743688 AAACATGCGGCTGTGTTTGA 59.256 45.000 25.15 0.00 44.36 2.69
3455 4907 0.961019 AACATGCGGCTGTGTTTGAT 59.039 45.000 15.26 0.00 35.13 2.57
3456 4908 0.241749 ACATGCGGCTGTGTTTGATG 59.758 50.000 0.00 0.00 0.00 3.07
3457 4909 0.457166 CATGCGGCTGTGTTTGATGG 60.457 55.000 0.00 0.00 0.00 3.51
3458 4910 2.126346 GCGGCTGTGTTTGATGGC 60.126 61.111 0.00 0.00 0.00 4.40
3459 4911 2.918345 GCGGCTGTGTTTGATGGCA 61.918 57.895 0.00 0.00 0.00 4.92
3460 4912 1.659233 CGGCTGTGTTTGATGGCAA 59.341 52.632 0.00 0.00 0.00 4.52
3461 4913 0.031857 CGGCTGTGTTTGATGGCAAA 59.968 50.000 0.00 0.00 41.47 3.68
3462 4914 1.787012 GGCTGTGTTTGATGGCAAAG 58.213 50.000 0.00 0.00 44.12 2.77
3463 4915 1.069049 GGCTGTGTTTGATGGCAAAGT 59.931 47.619 0.00 0.00 44.12 2.66
3464 4916 2.295909 GGCTGTGTTTGATGGCAAAGTA 59.704 45.455 0.00 0.00 44.12 2.24
3465 4917 3.308530 GCTGTGTTTGATGGCAAAGTAC 58.691 45.455 0.00 0.00 44.12 2.73
3466 4918 3.004734 GCTGTGTTTGATGGCAAAGTACT 59.995 43.478 0.00 0.00 44.12 2.73
3467 4919 4.539870 CTGTGTTTGATGGCAAAGTACTG 58.460 43.478 0.00 0.00 44.12 2.74
3468 4920 3.243367 TGTGTTTGATGGCAAAGTACTGC 60.243 43.478 0.00 0.00 44.12 4.40
3469 4921 2.954989 TGTTTGATGGCAAAGTACTGCA 59.045 40.909 9.09 0.00 44.12 4.41
3470 4922 3.382865 TGTTTGATGGCAAAGTACTGCAA 59.617 39.130 9.09 0.00 44.12 4.08
3471 4923 4.142071 TGTTTGATGGCAAAGTACTGCAAA 60.142 37.500 9.09 3.80 44.12 3.68
3472 4924 4.662468 TTGATGGCAAAGTACTGCAAAA 57.338 36.364 9.09 0.00 44.52 2.44
3473 4925 4.662468 TGATGGCAAAGTACTGCAAAAA 57.338 36.364 9.09 0.00 44.52 1.94
3474 4926 4.367450 TGATGGCAAAGTACTGCAAAAAC 58.633 39.130 9.09 0.00 44.52 2.43
3475 4927 3.172229 TGGCAAAGTACTGCAAAAACC 57.828 42.857 9.09 0.07 44.52 3.27
3476 4928 2.497675 TGGCAAAGTACTGCAAAAACCA 59.502 40.909 9.09 2.46 44.52 3.67
3477 4929 3.123050 GGCAAAGTACTGCAAAAACCAG 58.877 45.455 9.09 0.00 44.52 4.00
3478 4930 3.123050 GCAAAGTACTGCAAAAACCAGG 58.877 45.455 0.00 0.00 42.17 4.45
3479 4931 3.716601 CAAAGTACTGCAAAAACCAGGG 58.283 45.455 0.00 0.00 34.65 4.45
3480 4932 2.748209 AGTACTGCAAAAACCAGGGT 57.252 45.000 0.00 0.00 34.65 4.34
3481 4933 3.868619 AGTACTGCAAAAACCAGGGTA 57.131 42.857 0.00 0.00 34.65 3.69
3482 4934 4.382386 AGTACTGCAAAAACCAGGGTAT 57.618 40.909 0.00 0.00 34.65 2.73
3483 4935 4.736473 AGTACTGCAAAAACCAGGGTATT 58.264 39.130 0.00 0.00 34.65 1.89
3484 4936 4.522789 AGTACTGCAAAAACCAGGGTATTG 59.477 41.667 0.00 10.82 34.65 1.90
3485 4937 3.571590 ACTGCAAAAACCAGGGTATTGA 58.428 40.909 16.64 5.56 34.65 2.57
3486 4938 3.964031 ACTGCAAAAACCAGGGTATTGAA 59.036 39.130 16.64 8.54 34.65 2.69
3487 4939 4.407296 ACTGCAAAAACCAGGGTATTGAAA 59.593 37.500 16.64 6.75 34.65 2.69
3488 4940 5.104735 ACTGCAAAAACCAGGGTATTGAAAA 60.105 36.000 16.64 5.00 34.65 2.29
3489 4941 5.119694 TGCAAAAACCAGGGTATTGAAAAC 58.880 37.500 16.64 4.30 31.12 2.43
3490 4942 5.104735 TGCAAAAACCAGGGTATTGAAAACT 60.105 36.000 16.64 0.00 31.12 2.66
3491 4943 5.236263 GCAAAAACCAGGGTATTGAAAACTG 59.764 40.000 16.64 0.00 31.12 3.16
3492 4944 4.600692 AAACCAGGGTATTGAAAACTGC 57.399 40.909 0.00 0.00 0.00 4.40
3493 4945 3.237268 ACCAGGGTATTGAAAACTGCA 57.763 42.857 0.00 0.00 0.00 4.41
3494 4946 3.157087 ACCAGGGTATTGAAAACTGCAG 58.843 45.455 13.48 13.48 0.00 4.41
3495 4947 3.157087 CCAGGGTATTGAAAACTGCAGT 58.843 45.455 15.25 15.25 0.00 4.40
3496 4948 4.202524 ACCAGGGTATTGAAAACTGCAGTA 60.203 41.667 22.01 3.84 0.00 2.74
3497 4949 4.949856 CCAGGGTATTGAAAACTGCAGTAT 59.050 41.667 22.01 12.61 0.00 2.12
3498 4950 5.418840 CCAGGGTATTGAAAACTGCAGTATT 59.581 40.000 22.01 13.58 0.00 1.89
3499 4951 6.071391 CCAGGGTATTGAAAACTGCAGTATTT 60.071 38.462 22.01 20.71 0.00 1.40
3500 4952 7.378181 CAGGGTATTGAAAACTGCAGTATTTT 58.622 34.615 22.01 17.86 0.00 1.82
3501 4953 8.519526 CAGGGTATTGAAAACTGCAGTATTTTA 58.480 33.333 22.01 15.50 0.00 1.52
3502 4954 9.084533 AGGGTATTGAAAACTGCAGTATTTTAA 57.915 29.630 22.01 21.86 0.00 1.52
3503 4955 9.135843 GGGTATTGAAAACTGCAGTATTTTAAC 57.864 33.333 22.01 12.81 0.00 2.01
3504 4956 9.135843 GGTATTGAAAACTGCAGTATTTTAACC 57.864 33.333 22.01 17.62 0.00 2.85
3505 4957 9.135843 GTATTGAAAACTGCAGTATTTTAACCC 57.864 33.333 22.01 13.78 0.00 4.11
3506 4958 6.716934 TGAAAACTGCAGTATTTTAACCCA 57.283 33.333 22.01 9.10 0.00 4.51
3507 4959 7.296628 TGAAAACTGCAGTATTTTAACCCAT 57.703 32.000 22.01 0.00 0.00 4.00
3508 4960 7.731054 TGAAAACTGCAGTATTTTAACCCATT 58.269 30.769 22.01 2.71 0.00 3.16
3509 4961 7.655328 TGAAAACTGCAGTATTTTAACCCATTG 59.345 33.333 22.01 0.00 0.00 2.82
3510 4962 5.659440 ACTGCAGTATTTTAACCCATTGG 57.341 39.130 20.16 0.00 37.80 3.16
3521 4973 2.143876 ACCCATTGGTGCAAGATACC 57.856 50.000 1.20 0.00 45.58 2.73
3522 4974 1.357420 ACCCATTGGTGCAAGATACCA 59.643 47.619 1.20 0.00 45.58 3.25
3527 4979 2.949177 TGGTGCAAGATACCACAGTT 57.051 45.000 0.00 0.00 43.00 3.16
3528 4980 3.222173 TGGTGCAAGATACCACAGTTT 57.778 42.857 0.00 0.00 43.00 2.66
3529 4981 3.561143 TGGTGCAAGATACCACAGTTTT 58.439 40.909 0.00 0.00 43.00 2.43
3530 4982 3.317711 TGGTGCAAGATACCACAGTTTTG 59.682 43.478 0.00 0.00 43.00 2.44
3531 4983 3.568007 GGTGCAAGATACCACAGTTTTGA 59.432 43.478 0.00 0.00 38.12 2.69
3532 4984 4.537015 GTGCAAGATACCACAGTTTTGAC 58.463 43.478 0.00 0.00 32.37 3.18
3533 4985 4.036262 GTGCAAGATACCACAGTTTTGACA 59.964 41.667 0.00 0.00 32.37 3.58
3534 4986 4.826733 TGCAAGATACCACAGTTTTGACAT 59.173 37.500 0.00 0.00 0.00 3.06
3535 4987 6.000840 TGCAAGATACCACAGTTTTGACATA 58.999 36.000 0.00 0.00 0.00 2.29
3536 4988 6.658816 TGCAAGATACCACAGTTTTGACATAT 59.341 34.615 0.00 0.00 0.00 1.78
3537 4989 7.148255 TGCAAGATACCACAGTTTTGACATATC 60.148 37.037 0.00 0.00 0.00 1.63
3538 4990 7.148255 GCAAGATACCACAGTTTTGACATATCA 60.148 37.037 0.00 0.00 0.00 2.15
3539 4991 8.729756 CAAGATACCACAGTTTTGACATATCAA 58.270 33.333 0.00 0.00 43.28 2.57
3570 5022 9.472361 TTTTAGAGTATTGATAATACAGCGACC 57.528 33.333 12.63 0.00 44.87 4.79
3571 5023 6.026947 AGAGTATTGATAATACAGCGACCC 57.973 41.667 12.63 0.00 44.87 4.46
3572 5024 4.806330 AGTATTGATAATACAGCGACCCG 58.194 43.478 12.63 0.00 44.87 5.28
3573 5025 3.746045 ATTGATAATACAGCGACCCGT 57.254 42.857 0.00 0.00 0.00 5.28
3574 5026 3.530265 TTGATAATACAGCGACCCGTT 57.470 42.857 0.00 0.00 0.00 4.44
3575 5027 3.530265 TGATAATACAGCGACCCGTTT 57.470 42.857 0.00 0.00 0.00 3.60
3576 5028 3.191669 TGATAATACAGCGACCCGTTTG 58.808 45.455 0.00 0.00 0.00 2.93
3577 5029 2.012937 TAATACAGCGACCCGTTTGG 57.987 50.000 0.00 0.00 41.37 3.28
3578 5030 1.303091 AATACAGCGACCCGTTTGGC 61.303 55.000 0.00 0.00 37.83 4.52
3579 5031 2.180159 ATACAGCGACCCGTTTGGCT 62.180 55.000 0.00 0.00 37.83 4.75
3580 5032 1.534336 TACAGCGACCCGTTTGGCTA 61.534 55.000 0.00 0.00 37.83 3.93
3581 5033 2.100631 CAGCGACCCGTTTGGCTAG 61.101 63.158 0.00 0.00 37.83 3.42
3582 5034 2.047560 GCGACCCGTTTGGCTAGT 60.048 61.111 0.00 0.00 37.83 2.57
3583 5035 2.388232 GCGACCCGTTTGGCTAGTG 61.388 63.158 0.00 0.00 37.83 2.74
3584 5036 2.388232 CGACCCGTTTGGCTAGTGC 61.388 63.158 0.00 0.00 37.83 4.40
3594 5046 3.923614 GCTAGTGCCGATGTAGCG 58.076 61.111 0.00 0.00 30.50 4.26
3595 5047 1.359117 GCTAGTGCCGATGTAGCGA 59.641 57.895 0.00 0.00 30.50 4.93
3596 5048 0.039074 GCTAGTGCCGATGTAGCGAT 60.039 55.000 0.00 0.00 30.50 4.58
3597 5049 1.691127 CTAGTGCCGATGTAGCGATG 58.309 55.000 0.00 0.00 0.00 3.84
3598 5050 1.001268 CTAGTGCCGATGTAGCGATGT 60.001 52.381 0.00 0.00 0.00 3.06
3599 5051 1.029681 AGTGCCGATGTAGCGATGTA 58.970 50.000 0.00 0.00 0.00 2.29
3600 5052 1.407618 AGTGCCGATGTAGCGATGTAA 59.592 47.619 0.00 0.00 0.00 2.41
3601 5053 2.159156 AGTGCCGATGTAGCGATGTAAA 60.159 45.455 0.00 0.00 0.00 2.01
3602 5054 2.605818 GTGCCGATGTAGCGATGTAAAA 59.394 45.455 0.00 0.00 0.00 1.52
3603 5055 3.247648 GTGCCGATGTAGCGATGTAAAAT 59.752 43.478 0.00 0.00 0.00 1.82
3604 5056 3.247411 TGCCGATGTAGCGATGTAAAATG 59.753 43.478 0.00 0.00 0.00 2.32
3605 5057 3.493129 GCCGATGTAGCGATGTAAAATGA 59.507 43.478 0.00 0.00 0.00 2.57
3606 5058 4.376413 GCCGATGTAGCGATGTAAAATGAG 60.376 45.833 0.00 0.00 0.00 2.90
3607 5059 4.745125 CCGATGTAGCGATGTAAAATGAGT 59.255 41.667 0.00 0.00 0.00 3.41
3608 5060 5.234329 CCGATGTAGCGATGTAAAATGAGTT 59.766 40.000 0.00 0.00 0.00 3.01
3609 5061 6.238103 CCGATGTAGCGATGTAAAATGAGTTT 60.238 38.462 0.00 0.00 0.00 2.66
3610 5062 7.180079 CGATGTAGCGATGTAAAATGAGTTTT 58.820 34.615 0.00 0.00 40.48 2.43
3611 5063 8.325282 CGATGTAGCGATGTAAAATGAGTTTTA 58.675 33.333 0.00 0.00 38.44 1.52
3612 5064 9.638300 GATGTAGCGATGTAAAATGAGTTTTAG 57.362 33.333 0.00 0.00 39.69 1.85
3613 5065 7.461107 TGTAGCGATGTAAAATGAGTTTTAGC 58.539 34.615 0.00 0.00 39.69 3.09
3614 5066 6.743575 AGCGATGTAAAATGAGTTTTAGCT 57.256 33.333 0.00 0.00 39.69 3.32
3615 5067 7.843490 AGCGATGTAAAATGAGTTTTAGCTA 57.157 32.000 0.00 0.00 39.69 3.32
3616 5068 7.910304 AGCGATGTAAAATGAGTTTTAGCTAG 58.090 34.615 0.00 0.00 39.69 3.42
3617 5069 6.629252 GCGATGTAAAATGAGTTTTAGCTAGC 59.371 38.462 6.62 6.62 39.69 3.42
3618 5070 7.466050 GCGATGTAAAATGAGTTTTAGCTAGCT 60.466 37.037 23.12 23.12 39.69 3.32
3619 5071 8.058915 CGATGTAAAATGAGTTTTAGCTAGCTC 58.941 37.037 23.26 6.80 39.69 4.09
3620 5072 7.290857 TGTAAAATGAGTTTTAGCTAGCTCG 57.709 36.000 23.26 0.00 39.69 5.03
3621 5073 7.094631 TGTAAAATGAGTTTTAGCTAGCTCGA 58.905 34.615 23.26 8.71 39.69 4.04
3622 5074 6.410243 AAAATGAGTTTTAGCTAGCTCGAC 57.590 37.500 23.26 17.51 35.83 4.20
3623 5075 3.132629 TGAGTTTTAGCTAGCTCGACG 57.867 47.619 23.26 0.00 0.00 5.12
3624 5076 2.486982 TGAGTTTTAGCTAGCTCGACGT 59.513 45.455 23.26 4.35 0.00 4.34
3625 5077 3.057736 TGAGTTTTAGCTAGCTCGACGTT 60.058 43.478 23.26 3.78 0.00 3.99
3626 5078 3.243336 AGTTTTAGCTAGCTCGACGTTG 58.757 45.455 23.26 0.00 0.00 4.10
3627 5079 1.625616 TTTAGCTAGCTCGACGTTGC 58.374 50.000 23.26 7.33 0.00 4.17
3628 5080 0.522705 TTAGCTAGCTCGACGTTGCG 60.523 55.000 23.26 0.00 0.00 4.85
3629 5081 1.642037 TAGCTAGCTCGACGTTGCGT 61.642 55.000 23.26 0.00 45.10 5.24
3630 5082 2.778997 GCTAGCTCGACGTTGCGTG 61.779 63.158 7.70 0.00 41.37 5.34
3633 5085 3.995669 GCTCGACGTTGCGTGCAA 61.996 61.111 15.89 2.58 46.41 4.08
3641 5093 3.252964 TTGCGTGCAACTGATCGG 58.747 55.556 2.58 0.00 31.75 4.18
3642 5094 2.965147 TTGCGTGCAACTGATCGGC 61.965 57.895 2.58 0.00 31.75 5.54
3643 5095 4.166011 GCGTGCAACTGATCGGCC 62.166 66.667 0.00 0.00 31.75 6.13
3644 5096 2.741985 CGTGCAACTGATCGGCCA 60.742 61.111 2.24 0.00 31.75 5.36
3645 5097 2.108514 CGTGCAACTGATCGGCCAT 61.109 57.895 2.24 0.00 31.75 4.40
3646 5098 1.430632 GTGCAACTGATCGGCCATG 59.569 57.895 2.24 0.00 0.00 3.66
3647 5099 2.409055 TGCAACTGATCGGCCATGC 61.409 57.895 16.56 16.56 0.00 4.06
3648 5100 2.409055 GCAACTGATCGGCCATGCA 61.409 57.895 17.85 0.00 34.10 3.96
3649 5101 1.731433 GCAACTGATCGGCCATGCAT 61.731 55.000 17.85 0.00 34.10 3.96
3650 5102 1.596603 CAACTGATCGGCCATGCATA 58.403 50.000 2.24 0.00 0.00 3.14
3651 5103 2.156917 CAACTGATCGGCCATGCATAT 58.843 47.619 2.24 0.00 0.00 1.78
3652 5104 2.555325 CAACTGATCGGCCATGCATATT 59.445 45.455 2.24 0.00 0.00 1.28
3653 5105 2.867624 ACTGATCGGCCATGCATATTT 58.132 42.857 2.24 0.00 0.00 1.40
3654 5106 4.019792 ACTGATCGGCCATGCATATTTA 57.980 40.909 2.24 0.00 0.00 1.40
3655 5107 3.753272 ACTGATCGGCCATGCATATTTAC 59.247 43.478 2.24 0.00 0.00 2.01
3656 5108 3.081061 TGATCGGCCATGCATATTTACC 58.919 45.455 2.24 0.00 0.00 2.85
3657 5109 2.647683 TCGGCCATGCATATTTACCA 57.352 45.000 2.24 0.00 0.00 3.25
3658 5110 3.153369 TCGGCCATGCATATTTACCAT 57.847 42.857 2.24 0.00 0.00 3.55
3659 5111 3.081061 TCGGCCATGCATATTTACCATC 58.919 45.455 2.24 0.00 0.00 3.51
3660 5112 2.164219 CGGCCATGCATATTTACCATCC 59.836 50.000 2.24 0.00 0.00 3.51
3661 5113 2.164219 GGCCATGCATATTTACCATCCG 59.836 50.000 0.00 0.00 0.00 4.18
3662 5114 2.415893 GCCATGCATATTTACCATCCGC 60.416 50.000 0.00 0.00 0.00 5.54
3663 5115 2.819019 CCATGCATATTTACCATCCGCA 59.181 45.455 0.00 0.00 0.00 5.69
3664 5116 3.444742 CCATGCATATTTACCATCCGCAT 59.555 43.478 0.00 0.00 39.07 4.73
3665 5117 4.417506 CATGCATATTTACCATCCGCATG 58.582 43.478 0.00 7.02 46.23 4.06
3666 5118 2.228582 TGCATATTTACCATCCGCATGC 59.771 45.455 7.91 7.91 38.19 4.06
3667 5119 2.228582 GCATATTTACCATCCGCATGCA 59.771 45.455 19.57 0.00 37.74 3.96
3668 5120 3.825308 CATATTTACCATCCGCATGCAC 58.175 45.455 19.57 0.00 0.00 4.57
3669 5121 1.761449 ATTTACCATCCGCATGCACA 58.239 45.000 19.57 2.82 0.00 4.57
3670 5122 1.539157 TTTACCATCCGCATGCACAA 58.461 45.000 19.57 1.91 0.00 3.33
3671 5123 1.539157 TTACCATCCGCATGCACAAA 58.461 45.000 19.57 0.00 0.00 2.83
3672 5124 0.808125 TACCATCCGCATGCACAAAC 59.192 50.000 19.57 0.00 0.00 2.93
3673 5125 0.895100 ACCATCCGCATGCACAAACT 60.895 50.000 19.57 0.00 0.00 2.66
3674 5126 0.457166 CCATCCGCATGCACAAACTG 60.457 55.000 19.57 5.68 0.00 3.16
3675 5127 0.522626 CATCCGCATGCACAAACTGA 59.477 50.000 19.57 2.30 0.00 3.41
3676 5128 1.068402 CATCCGCATGCACAAACTGAA 60.068 47.619 19.57 0.00 0.00 3.02
3677 5129 1.246649 TCCGCATGCACAAACTGAAT 58.753 45.000 19.57 0.00 0.00 2.57
3678 5130 1.068402 TCCGCATGCACAAACTGAATG 60.068 47.619 19.57 0.00 0.00 2.67
3679 5131 1.342555 CGCATGCACAAACTGAATGG 58.657 50.000 19.57 0.00 0.00 3.16
3680 5132 1.073177 GCATGCACAAACTGAATGGC 58.927 50.000 14.21 0.00 0.00 4.40
3681 5133 1.605968 GCATGCACAAACTGAATGGCA 60.606 47.619 14.21 0.00 35.54 4.92
3682 5134 2.063266 CATGCACAAACTGAATGGCAC 58.937 47.619 0.00 0.00 33.67 5.01
3683 5135 1.401761 TGCACAAACTGAATGGCACT 58.598 45.000 0.00 0.00 0.00 4.40
3684 5136 1.067364 TGCACAAACTGAATGGCACTG 59.933 47.619 0.00 0.00 0.00 3.66
3685 5137 1.774639 CACAAACTGAATGGCACTGC 58.225 50.000 0.00 0.00 0.00 4.40
3686 5138 1.067364 CACAAACTGAATGGCACTGCA 59.933 47.619 2.82 0.00 0.00 4.41
3687 5139 1.067516 ACAAACTGAATGGCACTGCAC 59.932 47.619 2.82 0.00 0.00 4.57
3688 5140 0.311790 AAACTGAATGGCACTGCACG 59.688 50.000 2.82 0.00 0.00 5.34
3689 5141 1.518056 AACTGAATGGCACTGCACGG 61.518 55.000 2.82 0.00 0.00 4.94
3690 5142 3.332493 CTGAATGGCACTGCACGGC 62.332 63.158 2.82 0.00 0.00 5.68
3696 5148 3.204827 GCACTGCACGGCCATAGG 61.205 66.667 2.24 0.00 0.00 2.57
3709 5161 1.242076 CCATAGGCATGGCTTGTAGC 58.758 55.000 28.30 0.00 45.29 3.58
3710 5162 1.202855 CCATAGGCATGGCTTGTAGCT 60.203 52.381 28.30 3.37 45.29 3.32
3711 5163 2.579873 CATAGGCATGGCTTGTAGCTT 58.420 47.619 28.30 2.55 41.99 3.74
3712 5164 2.332063 TAGGCATGGCTTGTAGCTTC 57.668 50.000 28.30 0.00 41.99 3.86
3713 5165 0.622665 AGGCATGGCTTGTAGCTTCT 59.377 50.000 17.44 0.00 41.99 2.85
3714 5166 1.020437 GGCATGGCTTGTAGCTTCTC 58.980 55.000 12.86 0.00 41.99 2.87
3715 5167 0.654683 GCATGGCTTGTAGCTTCTCG 59.345 55.000 0.00 0.00 41.99 4.04
3716 5168 2.009042 GCATGGCTTGTAGCTTCTCGT 61.009 52.381 0.00 0.00 41.99 4.18
3717 5169 1.662629 CATGGCTTGTAGCTTCTCGTG 59.337 52.381 0.00 0.00 41.99 4.35
3718 5170 0.037326 TGGCTTGTAGCTTCTCGTGG 60.037 55.000 0.00 0.00 41.99 4.94
3719 5171 0.246635 GGCTTGTAGCTTCTCGTGGA 59.753 55.000 0.00 0.00 41.99 4.02
3720 5172 1.634702 GCTTGTAGCTTCTCGTGGAG 58.365 55.000 0.00 0.00 38.45 3.86
3721 5173 1.737363 GCTTGTAGCTTCTCGTGGAGG 60.737 57.143 0.00 0.00 38.45 4.30
3722 5174 1.819288 CTTGTAGCTTCTCGTGGAGGA 59.181 52.381 0.00 0.00 0.00 3.71
3723 5175 1.174783 TGTAGCTTCTCGTGGAGGAC 58.825 55.000 0.00 0.00 0.00 3.85
3731 5183 4.056125 CGTGGAGGACGCTCAGCA 62.056 66.667 0.00 0.00 42.21 4.41
3732 5184 2.343758 GTGGAGGACGCTCAGCAA 59.656 61.111 0.00 0.00 0.00 3.91
3733 5185 2.029844 GTGGAGGACGCTCAGCAAC 61.030 63.158 0.00 0.00 0.00 4.17
3734 5186 2.343758 GGAGGACGCTCAGCAACA 59.656 61.111 0.00 0.00 0.00 3.33
3735 5187 2.029844 GGAGGACGCTCAGCAACAC 61.030 63.158 0.00 0.00 0.00 3.32
3736 5188 2.356313 AGGACGCTCAGCAACACG 60.356 61.111 0.00 0.00 0.00 4.49
3737 5189 2.355837 GGACGCTCAGCAACACGA 60.356 61.111 0.00 0.00 0.00 4.35
3738 5190 1.954146 GGACGCTCAGCAACACGAA 60.954 57.895 0.00 0.00 0.00 3.85
3739 5191 1.488957 GACGCTCAGCAACACGAAG 59.511 57.895 0.00 0.00 0.00 3.79
3741 5193 0.031585 ACGCTCAGCAACACGAAGTA 59.968 50.000 0.00 0.00 41.61 2.24
3742 5194 0.710567 CGCTCAGCAACACGAAGTAG 59.289 55.000 0.00 0.00 41.61 2.57
3743 5195 0.440371 GCTCAGCAACACGAAGTAGC 59.560 55.000 0.00 0.00 41.61 3.58
3744 5196 1.071605 CTCAGCAACACGAAGTAGCC 58.928 55.000 0.00 0.00 41.61 3.93
3745 5197 0.666274 TCAGCAACACGAAGTAGCCG 60.666 55.000 0.00 0.00 41.61 5.52
3746 5198 0.666274 CAGCAACACGAAGTAGCCGA 60.666 55.000 0.00 0.00 41.61 5.54
3747 5199 0.666577 AGCAACACGAAGTAGCCGAC 60.667 55.000 0.00 0.00 41.61 4.79
3748 5200 0.666577 GCAACACGAAGTAGCCGACT 60.667 55.000 0.00 0.00 41.61 4.18
3749 5201 1.337821 CAACACGAAGTAGCCGACTC 58.662 55.000 0.00 0.00 41.61 3.36
3750 5202 0.956633 AACACGAAGTAGCCGACTCA 59.043 50.000 0.00 0.00 41.61 3.41
3751 5203 1.174783 ACACGAAGTAGCCGACTCAT 58.825 50.000 0.00 0.00 41.61 2.90
3752 5204 1.132643 ACACGAAGTAGCCGACTCATC 59.867 52.381 0.00 0.00 41.61 2.92
3753 5205 1.132453 CACGAAGTAGCCGACTCATCA 59.868 52.381 0.00 0.00 41.61 3.07
3754 5206 1.132643 ACGAAGTAGCCGACTCATCAC 59.867 52.381 0.00 0.00 41.94 3.06
3755 5207 1.534175 CGAAGTAGCCGACTCATCACC 60.534 57.143 0.00 0.00 37.44 4.02
3756 5208 0.456221 AAGTAGCCGACTCATCACCG 59.544 55.000 0.00 0.00 37.44 4.94
3757 5209 0.680280 AGTAGCCGACTCATCACCGT 60.680 55.000 0.00 0.00 29.95 4.83
3758 5210 0.248539 GTAGCCGACTCATCACCGTC 60.249 60.000 0.00 0.00 0.00 4.79
3759 5211 0.393944 TAGCCGACTCATCACCGTCT 60.394 55.000 0.00 0.00 0.00 4.18
3760 5212 1.517257 GCCGACTCATCACCGTCTG 60.517 63.158 0.00 0.00 0.00 3.51
3761 5213 1.139734 CCGACTCATCACCGTCTGG 59.860 63.158 0.00 0.00 42.84 3.86
3762 5214 1.139734 CGACTCATCACCGTCTGGG 59.860 63.158 0.00 0.00 40.75 4.45
3771 5223 4.373116 CCGTCTGGGTCGTGGTGG 62.373 72.222 0.00 0.00 0.00 4.61
3772 5224 3.299977 CGTCTGGGTCGTGGTGGA 61.300 66.667 0.00 0.00 0.00 4.02
3773 5225 2.657237 GTCTGGGTCGTGGTGGAG 59.343 66.667 0.00 0.00 0.00 3.86
3774 5226 2.603473 TCTGGGTCGTGGTGGAGG 60.603 66.667 0.00 0.00 0.00 4.30
3775 5227 2.923035 CTGGGTCGTGGTGGAGGT 60.923 66.667 0.00 0.00 0.00 3.85
3776 5228 1.608336 CTGGGTCGTGGTGGAGGTA 60.608 63.158 0.00 0.00 0.00 3.08
3777 5229 1.152290 TGGGTCGTGGTGGAGGTAA 60.152 57.895 0.00 0.00 0.00 2.85
3778 5230 1.294459 GGGTCGTGGTGGAGGTAAC 59.706 63.158 0.00 0.00 0.00 2.50
3779 5231 1.474332 GGGTCGTGGTGGAGGTAACA 61.474 60.000 0.00 0.00 41.41 2.41
3780 5232 0.320160 GGTCGTGGTGGAGGTAACAC 60.320 60.000 0.00 0.00 41.41 3.32
3783 5235 3.206090 GTGGTGGAGGTAACACGTC 57.794 57.895 0.00 0.00 39.69 4.34
3784 5236 0.390124 GTGGTGGAGGTAACACGTCA 59.610 55.000 0.00 0.00 39.69 4.35
3785 5237 0.390124 TGGTGGAGGTAACACGTCAC 59.610 55.000 0.00 0.00 39.69 3.67
3786 5238 0.665369 GGTGGAGGTAACACGTCACG 60.665 60.000 0.00 0.00 39.69 4.35
3787 5239 1.007038 TGGAGGTAACACGTCACGC 60.007 57.895 0.00 0.00 34.90 5.34
3788 5240 1.288127 GGAGGTAACACGTCACGCT 59.712 57.895 0.00 0.00 34.90 5.07
3789 5241 0.731855 GGAGGTAACACGTCACGCTC 60.732 60.000 0.00 0.00 34.90 5.03
3790 5242 0.240411 GAGGTAACACGTCACGCTCT 59.760 55.000 0.00 0.00 41.41 4.09
3791 5243 0.039437 AGGTAACACGTCACGCTCTG 60.039 55.000 0.00 0.00 41.41 3.35
3792 5244 1.615107 GGTAACACGTCACGCTCTGC 61.615 60.000 0.00 0.00 0.00 4.26
3793 5245 0.937699 GTAACACGTCACGCTCTGCA 60.938 55.000 0.00 0.00 0.00 4.41
3794 5246 0.038618 TAACACGTCACGCTCTGCAT 60.039 50.000 0.00 0.00 0.00 3.96
3795 5247 0.038618 AACACGTCACGCTCTGCATA 60.039 50.000 0.00 0.00 0.00 3.14
3796 5248 0.173481 ACACGTCACGCTCTGCATAT 59.827 50.000 0.00 0.00 0.00 1.78
3797 5249 0.573987 CACGTCACGCTCTGCATATG 59.426 55.000 0.00 0.00 0.00 1.78
3798 5250 0.528466 ACGTCACGCTCTGCATATGG 60.528 55.000 4.56 0.00 0.00 2.74
3799 5251 1.825285 CGTCACGCTCTGCATATGGC 61.825 60.000 4.56 0.00 45.13 4.40
3808 5260 3.513225 GCATATGGCGTTGCTGGT 58.487 55.556 4.56 0.00 35.95 4.00
3809 5261 1.356624 GCATATGGCGTTGCTGGTC 59.643 57.895 4.56 0.00 35.95 4.02
3810 5262 1.375853 GCATATGGCGTTGCTGGTCA 61.376 55.000 4.56 0.00 35.95 4.02
3811 5263 0.659427 CATATGGCGTTGCTGGTCAG 59.341 55.000 0.00 0.00 0.00 3.51
3812 5264 0.541392 ATATGGCGTTGCTGGTCAGA 59.459 50.000 1.65 0.00 0.00 3.27
3813 5265 0.323302 TATGGCGTTGCTGGTCAGAA 59.677 50.000 1.65 0.00 0.00 3.02
3814 5266 0.957395 ATGGCGTTGCTGGTCAGAAG 60.957 55.000 1.65 0.00 0.00 2.85
3815 5267 2.558313 GCGTTGCTGGTCAGAAGC 59.442 61.111 1.65 0.00 41.22 3.86
3816 5268 1.963338 GCGTTGCTGGTCAGAAGCT 60.963 57.895 1.65 0.00 41.42 3.74
3817 5269 1.864862 CGTTGCTGGTCAGAAGCTG 59.135 57.895 1.65 0.00 41.42 4.24
3818 5270 1.578423 GTTGCTGGTCAGAAGCTGC 59.422 57.895 1.65 0.00 45.04 5.25
3820 5272 3.261933 GCTGGTCAGAAGCTGCAC 58.738 61.111 1.02 0.00 44.44 4.57
3821 5273 1.598962 GCTGGTCAGAAGCTGCACA 60.599 57.895 1.02 0.00 44.44 4.57
3822 5274 1.168407 GCTGGTCAGAAGCTGCACAA 61.168 55.000 1.02 0.00 44.44 3.33
3823 5275 0.873054 CTGGTCAGAAGCTGCACAAG 59.127 55.000 1.02 0.00 0.00 3.16
3824 5276 0.181114 TGGTCAGAAGCTGCACAAGT 59.819 50.000 1.02 0.00 0.00 3.16
3825 5277 0.590195 GGTCAGAAGCTGCACAAGTG 59.410 55.000 1.02 0.00 0.00 3.16
3839 5291 3.923864 AGTGCGCGTGGACTGGAA 61.924 61.111 22.91 0.00 45.98 3.53
3840 5292 3.712881 GTGCGCGTGGACTGGAAC 61.713 66.667 13.83 0.00 32.98 3.62
3845 5297 4.003788 CGTGGACTGGAACGGCCT 62.004 66.667 0.00 0.00 39.14 5.19
3846 5298 2.358737 GTGGACTGGAACGGCCTG 60.359 66.667 0.00 0.00 39.14 4.85
3847 5299 2.525629 TGGACTGGAACGGCCTGA 60.526 61.111 0.00 0.00 39.14 3.86
3848 5300 2.047179 GGACTGGAACGGCCTGAC 60.047 66.667 0.00 4.48 39.14 3.51
3849 5301 2.047179 GACTGGAACGGCCTGACC 60.047 66.667 0.00 1.16 39.14 4.02
3850 5302 2.526873 ACTGGAACGGCCTGACCT 60.527 61.111 0.00 0.00 39.14 3.85
3851 5303 2.113243 GACTGGAACGGCCTGACCTT 62.113 60.000 0.00 0.00 39.14 3.50
3852 5304 1.376037 CTGGAACGGCCTGACCTTC 60.376 63.158 0.00 0.00 37.79 3.46
3853 5305 2.111999 CTGGAACGGCCTGACCTTCA 62.112 60.000 0.00 0.00 37.79 3.02
3854 5306 1.299976 GGAACGGCCTGACCTTCAT 59.700 57.895 0.00 0.00 35.61 2.57
3855 5307 0.744771 GGAACGGCCTGACCTTCATC 60.745 60.000 0.00 0.00 35.61 2.92
3856 5308 0.744771 GAACGGCCTGACCTTCATCC 60.745 60.000 0.00 0.00 35.61 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.401409 CGAATGTTTTGCGGCACAGAT 60.401 47.619 0.05 0.00 0.00 2.90
1 2 0.040514 CGAATGTTTTGCGGCACAGA 60.041 50.000 0.05 0.00 0.00 3.41
2 3 1.003262 CCGAATGTTTTGCGGCACAG 61.003 55.000 0.05 0.00 38.46 3.66
3 4 1.007964 CCGAATGTTTTGCGGCACA 60.008 52.632 0.05 0.00 38.46 4.57
4 5 0.109319 ATCCGAATGTTTTGCGGCAC 60.109 50.000 0.05 0.00 44.45 5.01
5 6 0.600557 AATCCGAATGTTTTGCGGCA 59.399 45.000 0.00 0.00 44.45 5.69
6 7 1.708822 AAATCCGAATGTTTTGCGGC 58.291 45.000 0.00 0.00 44.45 6.53
62 67 2.317530 TTGAACACACGGACACATCA 57.682 45.000 0.00 0.00 0.00 3.07
65 70 2.356382 GGATTTTGAACACACGGACACA 59.644 45.455 0.00 0.00 0.00 3.72
66 71 2.287368 GGGATTTTGAACACACGGACAC 60.287 50.000 0.00 0.00 0.00 3.67
73 78 3.429547 CGGTTTGTGGGATTTTGAACACA 60.430 43.478 0.00 0.00 41.59 3.72
88 93 2.482839 CCCAACTTTGCATTCGGTTTGT 60.483 45.455 0.00 0.00 0.00 2.83
131 136 1.385756 GGAGTCCTACGTGGAGGAGC 61.386 65.000 7.34 3.43 46.54 4.70
172 177 3.411517 CGGGCTCCAAGTGGGGAT 61.412 66.667 0.00 0.00 38.16 3.85
180 185 2.274645 CCAAATGTGCGGGCTCCAA 61.275 57.895 0.00 0.00 0.00 3.53
199 204 1.601903 GCGGAAACAATGCGGATATGA 59.398 47.619 0.00 0.00 43.91 2.15
230 235 0.543277 CTAGAGAGGGTGGCAATGCA 59.457 55.000 7.79 0.00 0.00 3.96
247 252 2.423892 GGAGAGTGACAACGATCAGCTA 59.576 50.000 0.00 0.00 0.00 3.32
251 256 1.272490 GGTGGAGAGTGACAACGATCA 59.728 52.381 0.00 0.00 0.00 2.92
257 262 1.416401 GAACAGGGTGGAGAGTGACAA 59.584 52.381 0.00 0.00 0.00 3.18
299 305 2.363711 TACGAGCGGATCCATGTGGC 62.364 60.000 13.41 6.51 34.44 5.01
302 308 1.364171 GCTACGAGCGGATCCATGT 59.636 57.895 13.41 6.48 0.00 3.21
321 327 1.222936 CTTCTCCGGCTCCAGCAAT 59.777 57.895 0.00 0.00 44.36 3.56
364 370 2.031683 GGGTCGCCAAGTTGATATTTCG 59.968 50.000 3.87 0.00 0.00 3.46
395 402 0.389948 GATCCTTTCGACACAGCGGT 60.390 55.000 0.00 0.00 0.00 5.68
401 408 5.233263 GCTTTCTCATAGATCCTTTCGACAC 59.767 44.000 0.00 0.00 0.00 3.67
415 422 1.094785 GCCAAAGCCGCTTTCTCATA 58.905 50.000 15.60 0.00 30.60 2.15
417 424 3.354678 GCCAAAGCCGCTTTCTCA 58.645 55.556 15.60 0.00 30.60 3.27
476 483 5.350365 GCAGACGAATACTCACATTTACCAA 59.650 40.000 0.00 0.00 0.00 3.67
797 1267 9.559732 TTTCATCGATATTCTGTATGGTGAAAT 57.440 29.630 0.00 0.00 29.87 2.17
1029 2472 2.754002 GAGGTAAGCGTAGTTGAGGAGT 59.246 50.000 0.00 0.00 0.00 3.85
1044 2487 2.038975 AGGAGGCCGCTGAGGTAA 59.961 61.111 6.40 0.00 43.70 2.85
1128 2571 3.995809 TAGGAGGAAGTGGGCGGGG 62.996 68.421 0.00 0.00 0.00 5.73
1773 3216 1.663379 CTACATGGAGGTCGGTCGCA 61.663 60.000 0.00 0.00 0.00 5.10
1967 3410 6.938507 ACCATGTTTGTATCAATGCAGATTT 58.061 32.000 0.00 0.00 0.00 2.17
1971 3414 6.309494 CAGAAACCATGTTTGTATCAATGCAG 59.691 38.462 0.00 0.00 0.00 4.41
2583 4026 0.895530 CGTAAGAAGCAGGGGACTCA 59.104 55.000 0.00 0.00 38.34 3.41
2649 4092 4.526970 TCATCTTCTTCATAACCTTGGCC 58.473 43.478 0.00 0.00 0.00 5.36
2823 4266 2.860009 CCTTCCATCACATCATCCTGG 58.140 52.381 0.00 0.00 0.00 4.45
2843 4286 0.179119 GCCCATTCACAGAGCATTGC 60.179 55.000 0.00 0.00 0.00 3.56
2862 4305 0.037326 AGTATGCACACACCAGACGG 60.037 55.000 0.00 0.00 38.77 4.79
2869 4312 5.566623 CATCAGAATCAAGTATGCACACAC 58.433 41.667 0.00 0.00 0.00 3.82
2905 4348 4.038042 TGATCATGGAGTAAGTAGCCTTCG 59.962 45.833 0.00 0.00 31.89 3.79
2967 4410 6.295249 TCATAACAGTGTGATTGAAGACCAA 58.705 36.000 0.00 0.00 39.41 3.67
2982 4425 3.650281 TGCCCATGTCATCATAACAGT 57.350 42.857 0.00 0.00 32.47 3.55
2997 4440 1.451207 GCATACGTGTCCATGCCCA 60.451 57.895 9.42 0.00 41.36 5.36
2998 4441 3.420943 GCATACGTGTCCATGCCC 58.579 61.111 9.42 0.00 41.36 5.36
3000 4443 1.368641 TGAAGCATACGTGTCCATGC 58.631 50.000 12.14 12.14 46.35 4.06
3001 4444 2.288729 CCATGAAGCATACGTGTCCATG 59.711 50.000 0.00 2.73 33.03 3.66
3002 4445 2.564771 CCATGAAGCATACGTGTCCAT 58.435 47.619 0.00 0.00 0.00 3.41
3003 4446 2.011548 GCCATGAAGCATACGTGTCCA 61.012 52.381 0.00 0.00 0.00 4.02
3004 4447 0.657840 GCCATGAAGCATACGTGTCC 59.342 55.000 0.00 0.00 0.00 4.02
3005 4448 0.301687 CGCCATGAAGCATACGTGTC 59.698 55.000 0.00 0.00 0.00 3.67
3006 4449 0.108377 TCGCCATGAAGCATACGTGT 60.108 50.000 0.00 0.00 0.00 4.49
3007 4450 0.578683 CTCGCCATGAAGCATACGTG 59.421 55.000 0.00 0.00 0.00 4.49
3008 4451 0.175760 ACTCGCCATGAAGCATACGT 59.824 50.000 0.00 0.00 0.00 3.57
3009 4452 0.578683 CACTCGCCATGAAGCATACG 59.421 55.000 0.00 0.00 0.00 3.06
3010 4453 0.940126 CCACTCGCCATGAAGCATAC 59.060 55.000 0.00 0.00 0.00 2.39
3011 4454 0.815213 GCCACTCGCCATGAAGCATA 60.815 55.000 0.00 0.00 0.00 3.14
3012 4455 2.117156 GCCACTCGCCATGAAGCAT 61.117 57.895 0.00 0.00 0.00 3.79
3013 4456 2.747460 GCCACTCGCCATGAAGCA 60.747 61.111 0.00 0.00 0.00 3.91
3014 4457 3.869272 CGCCACTCGCCATGAAGC 61.869 66.667 0.00 0.00 0.00 3.86
3023 4466 4.988598 ACACTTGGGCGCCACTCG 62.989 66.667 30.85 15.51 42.12 4.18
3024 4467 3.357079 CACACTTGGGCGCCACTC 61.357 66.667 30.85 12.03 30.78 3.51
3025 4468 4.954970 CCACACTTGGGCGCCACT 62.955 66.667 30.85 3.28 39.57 4.00
3026 4469 4.947147 TCCACACTTGGGCGCCAC 62.947 66.667 30.85 18.39 44.11 5.01
3027 4470 3.918253 GATCCACACTTGGGCGCCA 62.918 63.158 30.85 12.04 44.11 5.69
3028 4471 3.134127 GATCCACACTTGGGCGCC 61.134 66.667 21.18 21.18 44.11 6.53
3029 4472 2.359850 TGATCCACACTTGGGCGC 60.360 61.111 0.00 0.00 44.11 6.53
3030 4473 3.578456 GTGATCCACACTTGGGCG 58.422 61.111 0.00 0.00 44.11 6.13
3037 4480 8.539422 ATGTCATCATAACAGTGTGATCCACAC 61.539 40.741 19.23 19.23 46.39 3.82
3038 4481 6.576840 ATGTCATCATAACAGTGTGATCCACA 60.577 38.462 14.31 1.81 38.31 4.17
3039 4482 5.178061 TGTCATCATAACAGTGTGATCCAC 58.822 41.667 0.00 6.29 44.89 4.02
3040 4483 5.419239 TGTCATCATAACAGTGTGATCCA 57.581 39.130 0.00 0.00 33.65 3.41
3041 4484 5.237996 CCATGTCATCATAACAGTGTGATCC 59.762 44.000 0.00 0.00 33.65 3.36
3042 4485 5.237996 CCCATGTCATCATAACAGTGTGATC 59.762 44.000 0.00 0.00 33.65 2.92
3043 4486 5.128205 CCCATGTCATCATAACAGTGTGAT 58.872 41.667 0.00 0.00 36.11 3.06
3044 4487 4.516323 CCCATGTCATCATAACAGTGTGA 58.484 43.478 0.00 0.00 32.47 3.58
3045 4488 3.065786 GCCCATGTCATCATAACAGTGTG 59.934 47.826 0.00 0.00 32.47 3.82
3046 4489 3.282021 GCCCATGTCATCATAACAGTGT 58.718 45.455 0.00 0.00 32.47 3.55
3047 4490 3.281158 TGCCCATGTCATCATAACAGTG 58.719 45.455 0.00 0.00 32.47 3.66
3048 4491 3.650281 TGCCCATGTCATCATAACAGT 57.350 42.857 0.00 0.00 32.47 3.55
3049 4492 3.254903 CCATGCCCATGTCATCATAACAG 59.745 47.826 7.42 0.00 37.11 3.16
3050 4493 3.224269 CCATGCCCATGTCATCATAACA 58.776 45.455 7.42 0.00 37.11 2.41
3051 4494 2.559668 CCCATGCCCATGTCATCATAAC 59.440 50.000 7.42 0.00 37.11 1.89
3052 4495 2.879154 CCCATGCCCATGTCATCATAA 58.121 47.619 7.42 0.00 37.11 1.90
3053 4496 1.548355 GCCCATGCCCATGTCATCATA 60.548 52.381 7.42 0.00 37.11 2.15
3054 4497 0.830444 GCCCATGCCCATGTCATCAT 60.830 55.000 7.42 0.00 37.11 2.45
3055 4498 1.456145 GCCCATGCCCATGTCATCA 60.456 57.895 7.42 0.00 37.11 3.07
3056 4499 0.830444 ATGCCCATGCCCATGTCATC 60.830 55.000 7.42 0.00 37.11 2.92
3057 4500 1.118965 CATGCCCATGCCCATGTCAT 61.119 55.000 12.92 7.27 37.11 3.06
3058 4501 1.758906 CATGCCCATGCCCATGTCA 60.759 57.895 12.92 5.49 37.11 3.58
3059 4502 2.504274 CCATGCCCATGCCCATGTC 61.504 63.158 17.29 0.41 37.67 3.06
3060 4503 2.445085 CCATGCCCATGCCCATGT 60.445 61.111 17.29 0.00 37.67 3.21
3061 4504 2.123208 TCCATGCCCATGCCCATG 60.123 61.111 13.76 13.76 38.78 3.66
3062 4505 2.123164 GTCCATGCCCATGCCCAT 60.123 61.111 2.75 0.00 37.49 4.00
3063 4506 3.011500 ATGTCCATGCCCATGCCCA 62.011 57.895 2.75 2.40 37.49 5.36
3064 4507 2.123164 ATGTCCATGCCCATGCCC 60.123 61.111 2.75 0.00 37.49 5.36
3065 4508 0.467844 TACATGTCCATGCCCATGCC 60.468 55.000 17.77 0.00 41.69 4.40
3066 4509 1.271379 CATACATGTCCATGCCCATGC 59.729 52.381 17.77 0.00 41.69 4.06
3067 4510 1.271379 GCATACATGTCCATGCCCATG 59.729 52.381 18.89 16.77 41.36 3.66
3068 4511 1.624336 GCATACATGTCCATGCCCAT 58.376 50.000 18.89 0.00 41.36 4.00
3206 4649 1.048160 CCTCTGCTTCCTCCTCCTCC 61.048 65.000 0.00 0.00 0.00 4.30
3207 4650 0.325203 ACCTCTGCTTCCTCCTCCTC 60.325 60.000 0.00 0.00 0.00 3.71
3208 4651 0.118144 AACCTCTGCTTCCTCCTCCT 59.882 55.000 0.00 0.00 0.00 3.69
3209 4652 0.988063 AAACCTCTGCTTCCTCCTCC 59.012 55.000 0.00 0.00 0.00 4.30
3382 4829 5.303589 TGATCCAAAATAGACCCTACTACCG 59.696 44.000 0.00 0.00 0.00 4.02
3438 4890 0.457166 CCATCAAACACAGCCGCATG 60.457 55.000 0.00 0.00 0.00 4.06
3439 4891 1.885157 CCATCAAACACAGCCGCAT 59.115 52.632 0.00 0.00 0.00 4.73
3440 4892 2.918345 GCCATCAAACACAGCCGCA 61.918 57.895 0.00 0.00 0.00 5.69
3441 4893 2.126346 GCCATCAAACACAGCCGC 60.126 61.111 0.00 0.00 0.00 6.53
3442 4894 0.031857 TTTGCCATCAAACACAGCCG 59.968 50.000 0.00 0.00 37.28 5.52
3443 4895 1.069049 ACTTTGCCATCAAACACAGCC 59.931 47.619 0.00 0.00 37.28 4.85
3444 4896 2.514205 ACTTTGCCATCAAACACAGC 57.486 45.000 0.00 0.00 37.28 4.40
3445 4897 4.539870 CAGTACTTTGCCATCAAACACAG 58.460 43.478 0.00 0.00 37.28 3.66
3446 4898 3.243367 GCAGTACTTTGCCATCAAACACA 60.243 43.478 0.00 0.00 37.28 3.72
3447 4899 3.243367 TGCAGTACTTTGCCATCAAACAC 60.243 43.478 4.79 0.00 43.43 3.32
3448 4900 2.954989 TGCAGTACTTTGCCATCAAACA 59.045 40.909 4.79 0.00 43.43 2.83
3449 4901 3.641437 TGCAGTACTTTGCCATCAAAC 57.359 42.857 4.79 0.00 43.43 2.93
3450 4902 4.662468 TTTGCAGTACTTTGCCATCAAA 57.338 36.364 4.79 0.00 43.43 2.69
3451 4903 4.662468 TTTTGCAGTACTTTGCCATCAA 57.338 36.364 4.79 0.00 43.43 2.57
3452 4904 4.367450 GTTTTTGCAGTACTTTGCCATCA 58.633 39.130 4.79 0.00 43.43 3.07
3453 4905 3.740832 GGTTTTTGCAGTACTTTGCCATC 59.259 43.478 4.79 0.00 43.43 3.51
3454 4906 3.133721 TGGTTTTTGCAGTACTTTGCCAT 59.866 39.130 4.79 0.00 43.43 4.40
3455 4907 2.497675 TGGTTTTTGCAGTACTTTGCCA 59.502 40.909 4.79 0.00 43.43 4.92
3456 4908 3.123050 CTGGTTTTTGCAGTACTTTGCC 58.877 45.455 4.79 0.00 43.43 4.52
3457 4909 3.123050 CCTGGTTTTTGCAGTACTTTGC 58.877 45.455 0.00 0.00 44.33 3.68
3458 4910 3.132111 ACCCTGGTTTTTGCAGTACTTTG 59.868 43.478 0.00 0.00 0.00 2.77
3459 4911 3.371034 ACCCTGGTTTTTGCAGTACTTT 58.629 40.909 0.00 0.00 0.00 2.66
3460 4912 3.026707 ACCCTGGTTTTTGCAGTACTT 57.973 42.857 0.00 0.00 0.00 2.24
3461 4913 2.748209 ACCCTGGTTTTTGCAGTACT 57.252 45.000 0.00 0.00 0.00 2.73
3462 4914 4.521256 TCAATACCCTGGTTTTTGCAGTAC 59.479 41.667 0.00 0.00 0.00 2.73
3463 4915 4.730966 TCAATACCCTGGTTTTTGCAGTA 58.269 39.130 0.00 0.00 0.00 2.74
3464 4916 3.571590 TCAATACCCTGGTTTTTGCAGT 58.428 40.909 0.00 0.00 0.00 4.40
3465 4917 4.599047 TTCAATACCCTGGTTTTTGCAG 57.401 40.909 0.00 0.00 0.00 4.41
3466 4918 5.104735 AGTTTTCAATACCCTGGTTTTTGCA 60.105 36.000 0.00 0.00 0.00 4.08
3467 4919 5.236263 CAGTTTTCAATACCCTGGTTTTTGC 59.764 40.000 0.00 0.00 0.00 3.68
3468 4920 5.236263 GCAGTTTTCAATACCCTGGTTTTTG 59.764 40.000 0.00 0.00 0.00 2.44
3469 4921 5.104735 TGCAGTTTTCAATACCCTGGTTTTT 60.105 36.000 0.00 0.00 0.00 1.94
3470 4922 4.407296 TGCAGTTTTCAATACCCTGGTTTT 59.593 37.500 0.00 0.00 0.00 2.43
3471 4923 3.964031 TGCAGTTTTCAATACCCTGGTTT 59.036 39.130 0.00 0.00 0.00 3.27
3472 4924 3.571590 TGCAGTTTTCAATACCCTGGTT 58.428 40.909 0.00 0.00 0.00 3.67
3473 4925 3.157087 CTGCAGTTTTCAATACCCTGGT 58.843 45.455 5.25 0.00 0.00 4.00
3474 4926 3.157087 ACTGCAGTTTTCAATACCCTGG 58.843 45.455 15.25 0.00 0.00 4.45
3475 4927 6.515272 AATACTGCAGTTTTCAATACCCTG 57.485 37.500 27.06 0.00 0.00 4.45
3476 4928 7.539034 AAAATACTGCAGTTTTCAATACCCT 57.461 32.000 27.06 2.70 0.00 4.34
3477 4929 9.135843 GTTAAAATACTGCAGTTTTCAATACCC 57.864 33.333 27.06 5.96 0.00 3.69
3478 4930 9.135843 GGTTAAAATACTGCAGTTTTCAATACC 57.864 33.333 27.06 21.20 0.00 2.73
3479 4931 9.135843 GGGTTAAAATACTGCAGTTTTCAATAC 57.864 33.333 27.06 17.13 0.00 1.89
3480 4932 8.861086 TGGGTTAAAATACTGCAGTTTTCAATA 58.139 29.630 27.06 13.85 0.00 1.90
3481 4933 7.731054 TGGGTTAAAATACTGCAGTTTTCAAT 58.269 30.769 27.06 9.16 0.00 2.57
3482 4934 7.113658 TGGGTTAAAATACTGCAGTTTTCAA 57.886 32.000 27.06 16.80 0.00 2.69
3483 4935 6.716934 TGGGTTAAAATACTGCAGTTTTCA 57.283 33.333 27.06 12.98 0.00 2.69
3484 4936 7.117667 CCAATGGGTTAAAATACTGCAGTTTTC 59.882 37.037 27.06 10.92 0.00 2.29
3485 4937 6.934083 CCAATGGGTTAAAATACTGCAGTTTT 59.066 34.615 27.06 21.63 0.00 2.43
3486 4938 6.463360 CCAATGGGTTAAAATACTGCAGTTT 58.537 36.000 27.06 15.21 0.00 2.66
3487 4939 6.036577 CCAATGGGTTAAAATACTGCAGTT 57.963 37.500 27.06 9.59 0.00 3.16
3488 4940 5.659440 CCAATGGGTTAAAATACTGCAGT 57.341 39.130 25.12 25.12 0.00 4.40
3503 4955 2.142356 TGGTATCTTGCACCAATGGG 57.858 50.000 3.55 0.00 43.08 4.00
3508 4960 2.949177 AACTGTGGTATCTTGCACCA 57.051 45.000 0.00 0.00 43.82 4.17
3509 4961 3.568007 TCAAAACTGTGGTATCTTGCACC 59.432 43.478 0.00 0.00 36.54 5.01
3510 4962 4.036262 TGTCAAAACTGTGGTATCTTGCAC 59.964 41.667 0.00 0.00 0.00 4.57
3511 4963 4.203226 TGTCAAAACTGTGGTATCTTGCA 58.797 39.130 0.00 0.00 0.00 4.08
3512 4964 4.829064 TGTCAAAACTGTGGTATCTTGC 57.171 40.909 0.00 0.00 0.00 4.01
3513 4965 8.267620 TGATATGTCAAAACTGTGGTATCTTG 57.732 34.615 0.00 0.00 0.00 3.02
3514 4966 8.862325 TTGATATGTCAAAACTGTGGTATCTT 57.138 30.769 1.92 0.00 41.22 2.40
3544 4996 9.472361 GGTCGCTGTATTATCAATACTCTAAAA 57.528 33.333 9.71 0.00 43.27 1.52
3545 4997 8.086522 GGGTCGCTGTATTATCAATACTCTAAA 58.913 37.037 9.71 0.00 43.27 1.85
3546 4998 7.574404 CGGGTCGCTGTATTATCAATACTCTAA 60.574 40.741 9.71 0.00 43.27 2.10
3547 4999 6.128090 CGGGTCGCTGTATTATCAATACTCTA 60.128 42.308 9.71 0.00 43.27 2.43
3548 5000 5.335740 CGGGTCGCTGTATTATCAATACTCT 60.336 44.000 9.71 0.00 43.27 3.24
3549 5001 4.857588 CGGGTCGCTGTATTATCAATACTC 59.142 45.833 9.71 2.74 43.27 2.59
3550 5002 4.280174 ACGGGTCGCTGTATTATCAATACT 59.720 41.667 9.71 0.00 43.27 2.12
3551 5003 4.553323 ACGGGTCGCTGTATTATCAATAC 58.447 43.478 2.73 2.73 43.19 1.89
3552 5004 4.859304 ACGGGTCGCTGTATTATCAATA 57.141 40.909 0.00 0.00 0.00 1.90
3553 5005 3.746045 ACGGGTCGCTGTATTATCAAT 57.254 42.857 0.00 0.00 0.00 2.57
3554 5006 3.530265 AACGGGTCGCTGTATTATCAA 57.470 42.857 0.00 0.00 0.00 2.57
3555 5007 3.191669 CAAACGGGTCGCTGTATTATCA 58.808 45.455 0.00 0.00 0.00 2.15
3556 5008 2.542595 CCAAACGGGTCGCTGTATTATC 59.457 50.000 0.00 0.00 0.00 1.75
3557 5009 2.557317 CCAAACGGGTCGCTGTATTAT 58.443 47.619 0.00 0.00 0.00 1.28
3558 5010 2.008045 GCCAAACGGGTCGCTGTATTA 61.008 52.381 0.00 0.00 39.65 0.98
3559 5011 1.303091 GCCAAACGGGTCGCTGTATT 61.303 55.000 0.00 0.00 39.65 1.89
3560 5012 1.743995 GCCAAACGGGTCGCTGTAT 60.744 57.895 0.00 0.00 39.65 2.29
3561 5013 1.534336 TAGCCAAACGGGTCGCTGTA 61.534 55.000 0.00 0.00 39.65 2.74
3562 5014 2.781595 CTAGCCAAACGGGTCGCTGT 62.782 60.000 0.00 0.00 39.65 4.40
3563 5015 2.047655 TAGCCAAACGGGTCGCTG 60.048 61.111 0.00 0.00 39.65 5.18
3564 5016 2.264794 CTAGCCAAACGGGTCGCT 59.735 61.111 0.00 0.00 39.65 4.93
3565 5017 2.047560 ACTAGCCAAACGGGTCGC 60.048 61.111 0.00 0.00 39.65 5.19
3566 5018 2.388232 GCACTAGCCAAACGGGTCG 61.388 63.158 0.00 0.00 39.65 4.79
3567 5019 3.574780 GCACTAGCCAAACGGGTC 58.425 61.111 0.00 0.00 39.65 4.46
3577 5029 0.039074 ATCGCTACATCGGCACTAGC 60.039 55.000 0.00 0.00 41.10 3.42
3578 5030 1.001268 ACATCGCTACATCGGCACTAG 60.001 52.381 0.00 0.00 0.00 2.57
3579 5031 1.029681 ACATCGCTACATCGGCACTA 58.970 50.000 0.00 0.00 0.00 2.74
3580 5032 1.029681 TACATCGCTACATCGGCACT 58.970 50.000 0.00 0.00 0.00 4.40
3581 5033 1.847818 TTACATCGCTACATCGGCAC 58.152 50.000 0.00 0.00 0.00 5.01
3582 5034 2.588027 TTTACATCGCTACATCGGCA 57.412 45.000 0.00 0.00 0.00 5.69
3583 5035 3.493129 TCATTTTACATCGCTACATCGGC 59.507 43.478 0.00 0.00 0.00 5.54
3584 5036 4.745125 ACTCATTTTACATCGCTACATCGG 59.255 41.667 0.00 0.00 0.00 4.18
3585 5037 5.890110 ACTCATTTTACATCGCTACATCG 57.110 39.130 0.00 0.00 0.00 3.84
3586 5038 9.638300 CTAAAACTCATTTTACATCGCTACATC 57.362 33.333 0.00 0.00 38.91 3.06
3587 5039 8.122952 GCTAAAACTCATTTTACATCGCTACAT 58.877 33.333 0.00 0.00 38.91 2.29
3588 5040 7.333423 AGCTAAAACTCATTTTACATCGCTACA 59.667 33.333 0.00 0.00 36.79 2.74
3589 5041 7.685594 AGCTAAAACTCATTTTACATCGCTAC 58.314 34.615 0.00 0.00 36.79 3.58
3590 5042 7.843490 AGCTAAAACTCATTTTACATCGCTA 57.157 32.000 0.00 0.00 36.79 4.26
3591 5043 6.743575 AGCTAAAACTCATTTTACATCGCT 57.256 33.333 0.00 0.00 38.91 4.93
3592 5044 6.629252 GCTAGCTAAAACTCATTTTACATCGC 59.371 38.462 7.70 0.00 38.91 4.58
3593 5045 7.910304 AGCTAGCTAAAACTCATTTTACATCG 58.090 34.615 17.69 0.00 38.91 3.84
3594 5046 8.058915 CGAGCTAGCTAAAACTCATTTTACATC 58.941 37.037 19.38 0.00 38.91 3.06
3595 5047 7.764443 TCGAGCTAGCTAAAACTCATTTTACAT 59.236 33.333 19.38 0.00 38.91 2.29
3596 5048 7.063074 GTCGAGCTAGCTAAAACTCATTTTACA 59.937 37.037 19.38 0.00 38.91 2.41
3597 5049 7.392556 GTCGAGCTAGCTAAAACTCATTTTAC 58.607 38.462 19.38 0.00 38.91 2.01
3598 5050 6.252869 CGTCGAGCTAGCTAAAACTCATTTTA 59.747 38.462 19.38 0.00 38.91 1.52
3599 5051 5.062308 CGTCGAGCTAGCTAAAACTCATTTT 59.938 40.000 19.38 0.00 41.07 1.82
3600 5052 4.563184 CGTCGAGCTAGCTAAAACTCATTT 59.437 41.667 19.38 0.00 34.92 2.32
3601 5053 4.106197 CGTCGAGCTAGCTAAAACTCATT 58.894 43.478 19.38 0.00 0.00 2.57
3602 5054 3.128938 ACGTCGAGCTAGCTAAAACTCAT 59.871 43.478 19.38 2.27 0.00 2.90
3603 5055 2.486982 ACGTCGAGCTAGCTAAAACTCA 59.513 45.455 19.38 0.00 0.00 3.41
3604 5056 3.134021 ACGTCGAGCTAGCTAAAACTC 57.866 47.619 19.38 2.98 0.00 3.01
3605 5057 3.243336 CAACGTCGAGCTAGCTAAAACT 58.757 45.455 19.38 0.00 0.00 2.66
3606 5058 2.222530 GCAACGTCGAGCTAGCTAAAAC 60.223 50.000 19.38 14.59 0.00 2.43
3607 5059 1.990563 GCAACGTCGAGCTAGCTAAAA 59.009 47.619 19.38 2.86 0.00 1.52
3608 5060 1.625616 GCAACGTCGAGCTAGCTAAA 58.374 50.000 19.38 5.75 0.00 1.85
3609 5061 0.522705 CGCAACGTCGAGCTAGCTAA 60.523 55.000 19.38 6.17 0.00 3.09
3610 5062 1.062047 CGCAACGTCGAGCTAGCTA 59.938 57.895 19.38 0.00 0.00 3.32
3611 5063 2.202492 CGCAACGTCGAGCTAGCT 60.202 61.111 19.45 19.45 0.00 3.32
3612 5064 2.504244 ACGCAACGTCGAGCTAGC 60.504 61.111 6.62 6.62 33.69 3.42
3613 5065 2.778997 GCACGCAACGTCGAGCTAG 61.779 63.158 10.89 0.00 41.57 3.42
3614 5066 2.803670 GCACGCAACGTCGAGCTA 60.804 61.111 10.89 0.00 41.57 3.32
3615 5067 4.942481 TGCACGCAACGTCGAGCT 62.942 61.111 17.12 0.00 44.29 4.09
3616 5068 3.995669 TTGCACGCAACGTCGAGC 61.996 61.111 11.18 11.18 44.25 5.03
3617 5069 2.128128 GTTGCACGCAACGTCGAG 60.128 61.111 18.23 0.00 45.24 4.04
3624 5076 2.965147 GCCGATCAGTTGCACGCAA 61.965 57.895 0.00 0.00 0.00 4.85
3625 5077 3.422303 GCCGATCAGTTGCACGCA 61.422 61.111 0.00 0.00 0.00 5.24
3626 5078 4.166011 GGCCGATCAGTTGCACGC 62.166 66.667 0.00 0.00 0.00 5.34
3627 5079 2.108514 ATGGCCGATCAGTTGCACG 61.109 57.895 0.00 0.00 0.00 5.34
3628 5080 1.430632 CATGGCCGATCAGTTGCAC 59.569 57.895 0.00 0.00 0.00 4.57
3629 5081 2.409055 GCATGGCCGATCAGTTGCA 61.409 57.895 0.00 0.00 0.00 4.08
3630 5082 1.731433 ATGCATGGCCGATCAGTTGC 61.731 55.000 0.00 0.00 0.00 4.17
3631 5083 1.596603 TATGCATGGCCGATCAGTTG 58.403 50.000 10.16 0.00 0.00 3.16
3632 5084 2.574006 ATATGCATGGCCGATCAGTT 57.426 45.000 10.16 0.00 0.00 3.16
3633 5085 2.574006 AATATGCATGGCCGATCAGT 57.426 45.000 10.16 0.00 0.00 3.41
3634 5086 3.127548 GGTAAATATGCATGGCCGATCAG 59.872 47.826 10.16 0.00 0.00 2.90
3635 5087 3.081061 GGTAAATATGCATGGCCGATCA 58.919 45.455 10.16 0.00 0.00 2.92
3636 5088 3.081061 TGGTAAATATGCATGGCCGATC 58.919 45.455 10.16 0.00 0.00 3.69
3637 5089 3.153369 TGGTAAATATGCATGGCCGAT 57.847 42.857 10.16 0.00 0.00 4.18
3638 5090 2.647683 TGGTAAATATGCATGGCCGA 57.352 45.000 10.16 0.00 0.00 5.54
3639 5091 2.164219 GGATGGTAAATATGCATGGCCG 59.836 50.000 10.16 0.00 0.00 6.13
3640 5092 2.164219 CGGATGGTAAATATGCATGGCC 59.836 50.000 10.16 0.00 0.00 5.36
3641 5093 2.415893 GCGGATGGTAAATATGCATGGC 60.416 50.000 10.16 0.00 0.00 4.40
3642 5094 2.819019 TGCGGATGGTAAATATGCATGG 59.181 45.455 10.16 0.00 0.00 3.66
3643 5095 4.707030 ATGCGGATGGTAAATATGCATG 57.293 40.909 10.16 0.00 39.84 4.06
3644 5096 3.119388 GCATGCGGATGGTAAATATGCAT 60.119 43.478 19.11 3.79 41.83 3.96
3645 5097 2.228582 GCATGCGGATGGTAAATATGCA 59.771 45.455 19.11 0.00 39.25 3.96
3646 5098 2.228582 TGCATGCGGATGGTAAATATGC 59.771 45.455 19.11 2.58 39.72 3.14
3647 5099 3.252944 TGTGCATGCGGATGGTAAATATG 59.747 43.478 19.11 0.00 0.00 1.78
3648 5100 3.485394 TGTGCATGCGGATGGTAAATAT 58.515 40.909 19.11 0.00 0.00 1.28
3649 5101 2.924421 TGTGCATGCGGATGGTAAATA 58.076 42.857 19.11 0.00 0.00 1.40
3650 5102 1.761449 TGTGCATGCGGATGGTAAAT 58.239 45.000 19.11 0.00 0.00 1.40
3651 5103 1.539157 TTGTGCATGCGGATGGTAAA 58.461 45.000 19.11 0.00 0.00 2.01
3652 5104 1.201181 GTTTGTGCATGCGGATGGTAA 59.799 47.619 19.11 0.00 0.00 2.85
3653 5105 0.808125 GTTTGTGCATGCGGATGGTA 59.192 50.000 19.11 0.00 0.00 3.25
3654 5106 0.895100 AGTTTGTGCATGCGGATGGT 60.895 50.000 19.11 0.00 0.00 3.55
3655 5107 0.457166 CAGTTTGTGCATGCGGATGG 60.457 55.000 19.11 0.53 0.00 3.51
3656 5108 0.522626 TCAGTTTGTGCATGCGGATG 59.477 50.000 13.21 13.21 0.00 3.51
3657 5109 1.246649 TTCAGTTTGTGCATGCGGAT 58.753 45.000 14.09 0.00 0.00 4.18
3658 5110 1.068402 CATTCAGTTTGTGCATGCGGA 60.068 47.619 14.09 0.00 0.00 5.54
3659 5111 1.342555 CATTCAGTTTGTGCATGCGG 58.657 50.000 14.09 0.00 0.00 5.69
3660 5112 1.342555 CCATTCAGTTTGTGCATGCG 58.657 50.000 14.09 0.00 0.00 4.73
3661 5113 1.073177 GCCATTCAGTTTGTGCATGC 58.927 50.000 11.82 11.82 0.00 4.06
3662 5114 2.063266 GTGCCATTCAGTTTGTGCATG 58.937 47.619 0.00 0.00 0.00 4.06
3663 5115 1.965643 AGTGCCATTCAGTTTGTGCAT 59.034 42.857 0.00 0.00 0.00 3.96
3664 5116 1.067364 CAGTGCCATTCAGTTTGTGCA 59.933 47.619 0.00 0.00 0.00 4.57
3665 5117 1.774639 CAGTGCCATTCAGTTTGTGC 58.225 50.000 0.00 0.00 0.00 4.57
3666 5118 1.067364 TGCAGTGCCATTCAGTTTGTG 59.933 47.619 13.72 0.00 0.00 3.33
3667 5119 1.067516 GTGCAGTGCCATTCAGTTTGT 59.932 47.619 13.72 0.00 0.00 2.83
3668 5120 1.774639 GTGCAGTGCCATTCAGTTTG 58.225 50.000 13.72 0.00 0.00 2.93
3669 5121 0.311790 CGTGCAGTGCCATTCAGTTT 59.688 50.000 13.72 0.00 0.00 2.66
3670 5122 1.518056 CCGTGCAGTGCCATTCAGTT 61.518 55.000 13.72 0.00 0.00 3.16
3671 5123 1.968017 CCGTGCAGTGCCATTCAGT 60.968 57.895 13.72 0.00 0.00 3.41
3672 5124 2.872557 CCGTGCAGTGCCATTCAG 59.127 61.111 13.72 0.00 0.00 3.02
3673 5125 3.364441 GCCGTGCAGTGCCATTCA 61.364 61.111 13.72 0.00 0.00 2.57
3679 5131 3.204827 CCTATGGCCGTGCAGTGC 61.205 66.667 8.58 8.58 0.00 4.40
3680 5132 3.204827 GCCTATGGCCGTGCAGTG 61.205 66.667 8.05 0.00 44.06 3.66
3691 5143 2.267174 AGCTACAAGCCATGCCTATG 57.733 50.000 0.00 0.00 43.77 2.23
3692 5144 2.441001 AGAAGCTACAAGCCATGCCTAT 59.559 45.455 0.00 0.00 43.77 2.57
3693 5145 1.839994 AGAAGCTACAAGCCATGCCTA 59.160 47.619 0.00 0.00 43.77 3.93
3694 5146 0.622665 AGAAGCTACAAGCCATGCCT 59.377 50.000 0.00 0.00 43.77 4.75
3695 5147 1.020437 GAGAAGCTACAAGCCATGCC 58.980 55.000 0.00 0.00 43.77 4.40
3696 5148 0.654683 CGAGAAGCTACAAGCCATGC 59.345 55.000 0.00 0.00 43.77 4.06
3697 5149 1.662629 CACGAGAAGCTACAAGCCATG 59.337 52.381 0.00 0.00 43.77 3.66
3698 5150 1.406069 CCACGAGAAGCTACAAGCCAT 60.406 52.381 0.00 0.00 43.77 4.40
3699 5151 0.037326 CCACGAGAAGCTACAAGCCA 60.037 55.000 0.00 0.00 43.77 4.75
3700 5152 0.246635 TCCACGAGAAGCTACAAGCC 59.753 55.000 0.00 0.00 43.77 4.35
3701 5153 1.634702 CTCCACGAGAAGCTACAAGC 58.365 55.000 0.00 0.00 42.84 4.01
3702 5154 1.819288 TCCTCCACGAGAAGCTACAAG 59.181 52.381 0.00 0.00 0.00 3.16
3703 5155 1.544691 GTCCTCCACGAGAAGCTACAA 59.455 52.381 0.00 0.00 0.00 2.41
3704 5156 1.174783 GTCCTCCACGAGAAGCTACA 58.825 55.000 0.00 0.00 0.00 2.74
3715 5167 2.029844 GTTGCTGAGCGTCCTCCAC 61.030 63.158 0.00 0.00 37.29 4.02
3716 5168 2.343758 GTTGCTGAGCGTCCTCCA 59.656 61.111 0.00 0.00 37.29 3.86
3717 5169 2.029844 GTGTTGCTGAGCGTCCTCC 61.030 63.158 0.00 0.00 37.29 4.30
3718 5170 2.375766 CGTGTTGCTGAGCGTCCTC 61.376 63.158 0.00 0.00 38.62 3.71
3719 5171 2.356313 CGTGTTGCTGAGCGTCCT 60.356 61.111 0.00 0.00 0.00 3.85
3720 5172 1.891060 CTTCGTGTTGCTGAGCGTCC 61.891 60.000 0.00 0.00 0.00 4.79
3721 5173 1.215655 ACTTCGTGTTGCTGAGCGTC 61.216 55.000 0.00 0.00 0.00 5.19
3722 5174 0.031585 TACTTCGTGTTGCTGAGCGT 59.968 50.000 0.00 0.00 0.00 5.07
3723 5175 0.710567 CTACTTCGTGTTGCTGAGCG 59.289 55.000 0.00 0.00 0.00 5.03
3724 5176 0.440371 GCTACTTCGTGTTGCTGAGC 59.560 55.000 0.00 0.00 42.58 4.26
3725 5177 1.071605 GGCTACTTCGTGTTGCTGAG 58.928 55.000 14.01 0.00 44.64 3.35
3726 5178 3.210857 GGCTACTTCGTGTTGCTGA 57.789 52.632 14.01 0.00 44.64 4.26
3727 5179 1.781555 CGGCTACTTCGTGTTGCTG 59.218 57.895 14.01 12.26 44.64 4.41
3728 5180 0.666577 GTCGGCTACTTCGTGTTGCT 60.667 55.000 14.01 0.00 44.64 3.91
3729 5181 0.666577 AGTCGGCTACTTCGTGTTGC 60.667 55.000 0.00 8.50 44.55 4.17
3730 5182 1.335597 TGAGTCGGCTACTTCGTGTTG 60.336 52.381 0.00 0.00 39.07 3.33
3731 5183 0.956633 TGAGTCGGCTACTTCGTGTT 59.043 50.000 0.00 0.00 39.07 3.32
3732 5184 1.132643 GATGAGTCGGCTACTTCGTGT 59.867 52.381 0.00 0.00 39.07 4.49
3733 5185 1.132453 TGATGAGTCGGCTACTTCGTG 59.868 52.381 0.00 0.00 39.07 4.35
3734 5186 1.132643 GTGATGAGTCGGCTACTTCGT 59.867 52.381 0.00 0.00 39.07 3.85
3735 5187 1.534175 GGTGATGAGTCGGCTACTTCG 60.534 57.143 0.00 0.00 39.07 3.79
3736 5188 1.534175 CGGTGATGAGTCGGCTACTTC 60.534 57.143 0.00 0.00 39.07 3.01
3737 5189 0.456221 CGGTGATGAGTCGGCTACTT 59.544 55.000 0.00 0.00 39.07 2.24
3738 5190 0.680280 ACGGTGATGAGTCGGCTACT 60.680 55.000 0.00 0.00 42.80 2.57
3739 5191 0.248539 GACGGTGATGAGTCGGCTAC 60.249 60.000 0.00 0.00 0.00 3.58
3740 5192 0.393944 AGACGGTGATGAGTCGGCTA 60.394 55.000 0.00 0.00 40.83 3.93
3741 5193 1.679305 AGACGGTGATGAGTCGGCT 60.679 57.895 0.00 0.00 41.86 5.52
3742 5194 1.517257 CAGACGGTGATGAGTCGGC 60.517 63.158 0.00 0.00 41.86 5.54
3743 5195 1.139734 CCAGACGGTGATGAGTCGG 59.860 63.158 0.00 0.00 41.86 4.79
3744 5196 1.139734 CCCAGACGGTGATGAGTCG 59.860 63.158 0.00 0.00 41.86 4.18
3745 5197 2.277858 ACCCAGACGGTGATGAGTC 58.722 57.895 0.00 0.00 46.09 3.36
3746 5198 4.541213 ACCCAGACGGTGATGAGT 57.459 55.556 0.00 0.00 46.09 3.41
3754 5206 4.373116 CCACCACGACCCAGACGG 62.373 72.222 0.00 0.00 37.81 4.79
3755 5207 3.282745 CTCCACCACGACCCAGACG 62.283 68.421 0.00 0.00 0.00 4.18
3756 5208 2.657237 CTCCACCACGACCCAGAC 59.343 66.667 0.00 0.00 0.00 3.51
3757 5209 2.084089 TACCTCCACCACGACCCAGA 62.084 60.000 0.00 0.00 0.00 3.86
3758 5210 1.189524 TTACCTCCACCACGACCCAG 61.190 60.000 0.00 0.00 0.00 4.45
3759 5211 1.152290 TTACCTCCACCACGACCCA 60.152 57.895 0.00 0.00 0.00 4.51
3760 5212 1.294459 GTTACCTCCACCACGACCC 59.706 63.158 0.00 0.00 0.00 4.46
3761 5213 0.320160 GTGTTACCTCCACCACGACC 60.320 60.000 0.00 0.00 0.00 4.79
3762 5214 3.206090 GTGTTACCTCCACCACGAC 57.794 57.895 0.00 0.00 0.00 4.34
3764 5216 4.255126 CGTGTTACCTCCACCACG 57.745 61.111 0.00 0.00 43.70 4.94
3765 5217 0.390124 TGACGTGTTACCTCCACCAC 59.610 55.000 0.00 0.00 0.00 4.16
3766 5218 0.390124 GTGACGTGTTACCTCCACCA 59.610 55.000 0.00 0.00 0.00 4.17
3767 5219 0.665369 CGTGACGTGTTACCTCCACC 60.665 60.000 0.00 0.00 0.00 4.61
3768 5220 1.280206 GCGTGACGTGTTACCTCCAC 61.280 60.000 6.91 0.00 0.00 4.02
3769 5221 1.007038 GCGTGACGTGTTACCTCCA 60.007 57.895 6.91 0.00 0.00 3.86
3770 5222 0.731855 GAGCGTGACGTGTTACCTCC 60.732 60.000 6.91 0.00 0.00 4.30
3771 5223 0.240411 AGAGCGTGACGTGTTACCTC 59.760 55.000 6.91 3.32 0.00 3.85
3772 5224 0.039437 CAGAGCGTGACGTGTTACCT 60.039 55.000 6.91 0.00 0.00 3.08
3773 5225 1.615107 GCAGAGCGTGACGTGTTACC 61.615 60.000 6.91 0.00 0.00 2.85
3774 5226 0.937699 TGCAGAGCGTGACGTGTTAC 60.938 55.000 6.91 0.00 0.00 2.50
3775 5227 0.038618 ATGCAGAGCGTGACGTGTTA 60.039 50.000 6.91 0.00 0.00 2.41
3776 5228 0.038618 TATGCAGAGCGTGACGTGTT 60.039 50.000 6.91 0.00 0.00 3.32
3777 5229 0.173481 ATATGCAGAGCGTGACGTGT 59.827 50.000 6.91 0.00 0.00 4.49
3778 5230 0.573987 CATATGCAGAGCGTGACGTG 59.426 55.000 6.91 0.00 0.00 4.49
3779 5231 0.528466 CCATATGCAGAGCGTGACGT 60.528 55.000 6.91 0.00 0.00 4.34
3780 5232 1.825285 GCCATATGCAGAGCGTGACG 61.825 60.000 0.00 0.00 40.77 4.35
3781 5233 1.825285 CGCCATATGCAGAGCGTGAC 61.825 60.000 13.77 0.00 43.45 3.67
3782 5234 1.592400 CGCCATATGCAGAGCGTGA 60.592 57.895 13.77 0.00 43.45 4.35
3783 5235 2.933666 CGCCATATGCAGAGCGTG 59.066 61.111 13.77 0.00 43.45 5.34
3786 5238 1.009222 GCAACGCCATATGCAGAGC 60.009 57.895 0.00 0.00 42.12 4.09
3787 5239 0.306840 CAGCAACGCCATATGCAGAG 59.693 55.000 0.00 0.00 44.95 3.35
3788 5240 1.096967 CCAGCAACGCCATATGCAGA 61.097 55.000 0.00 0.00 44.95 4.26
3789 5241 1.357690 CCAGCAACGCCATATGCAG 59.642 57.895 0.00 0.00 44.95 4.41
3790 5242 1.375853 GACCAGCAACGCCATATGCA 61.376 55.000 0.00 0.00 44.95 3.96
3791 5243 1.356624 GACCAGCAACGCCATATGC 59.643 57.895 0.00 0.00 42.87 3.14
3792 5244 0.659427 CTGACCAGCAACGCCATATG 59.341 55.000 0.00 0.00 0.00 1.78
3793 5245 0.541392 TCTGACCAGCAACGCCATAT 59.459 50.000 0.00 0.00 0.00 1.78
3794 5246 0.323302 TTCTGACCAGCAACGCCATA 59.677 50.000 0.00 0.00 0.00 2.74
3795 5247 0.957395 CTTCTGACCAGCAACGCCAT 60.957 55.000 0.00 0.00 0.00 4.40
3796 5248 1.597854 CTTCTGACCAGCAACGCCA 60.598 57.895 0.00 0.00 0.00 5.69
3797 5249 2.970974 GCTTCTGACCAGCAACGCC 61.971 63.158 0.00 0.00 37.22 5.68
3798 5250 1.963338 AGCTTCTGACCAGCAACGC 60.963 57.895 4.33 0.00 39.99 4.84
3799 5251 1.864862 CAGCTTCTGACCAGCAACG 59.135 57.895 4.33 0.00 39.99 4.10
3800 5252 1.168407 TGCAGCTTCTGACCAGCAAC 61.168 55.000 4.33 0.00 39.99 4.17
3801 5253 1.148949 TGCAGCTTCTGACCAGCAA 59.851 52.632 4.33 0.00 39.99 3.91
3802 5254 1.598962 GTGCAGCTTCTGACCAGCA 60.599 57.895 4.33 0.00 39.99 4.41
3803 5255 1.168407 TTGTGCAGCTTCTGACCAGC 61.168 55.000 0.00 0.00 37.56 4.85
3804 5256 0.873054 CTTGTGCAGCTTCTGACCAG 59.127 55.000 0.00 0.00 32.44 4.00
3805 5257 0.181114 ACTTGTGCAGCTTCTGACCA 59.819 50.000 0.00 0.00 32.44 4.02
3806 5258 0.590195 CACTTGTGCAGCTTCTGACC 59.410 55.000 0.00 0.00 32.44 4.02
3807 5259 0.040603 GCACTTGTGCAGCTTCTGAC 60.041 55.000 19.36 0.00 32.44 3.51
3808 5260 1.501337 CGCACTTGTGCAGCTTCTGA 61.501 55.000 22.97 0.00 32.44 3.27
3809 5261 1.082300 CGCACTTGTGCAGCTTCTG 60.082 57.895 22.97 3.78 34.41 3.02
3810 5262 3.337619 CGCACTTGTGCAGCTTCT 58.662 55.556 22.97 0.00 34.41 2.85
3818 5270 2.967076 AGTCCACGCGCACTTGTG 60.967 61.111 5.73 7.24 35.87 3.33
3819 5271 2.967076 CAGTCCACGCGCACTTGT 60.967 61.111 5.73 0.00 0.00 3.16
3820 5272 3.716006 CCAGTCCACGCGCACTTG 61.716 66.667 5.73 0.12 0.00 3.16
3821 5273 3.454587 TTCCAGTCCACGCGCACTT 62.455 57.895 5.73 0.00 0.00 3.16
3822 5274 3.923864 TTCCAGTCCACGCGCACT 61.924 61.111 5.73 2.45 0.00 4.40
3823 5275 3.712881 GTTCCAGTCCACGCGCAC 61.713 66.667 5.73 0.00 0.00 5.34
3828 5280 4.003788 AGGCCGTTCCAGTCCACG 62.004 66.667 0.00 0.00 37.29 4.94
3829 5281 2.358737 CAGGCCGTTCCAGTCCAC 60.359 66.667 0.00 0.00 37.29 4.02
3830 5282 2.525629 TCAGGCCGTTCCAGTCCA 60.526 61.111 0.00 0.00 37.29 4.02
3831 5283 2.047179 GTCAGGCCGTTCCAGTCC 60.047 66.667 0.00 0.00 37.29 3.85
3832 5284 2.047179 GGTCAGGCCGTTCCAGTC 60.047 66.667 0.00 0.00 37.29 3.51
3833 5285 2.113243 GAAGGTCAGGCCGTTCCAGT 62.113 60.000 13.80 3.37 43.70 4.00
3834 5286 1.376037 GAAGGTCAGGCCGTTCCAG 60.376 63.158 13.80 0.00 43.70 3.86
3835 5287 1.488705 ATGAAGGTCAGGCCGTTCCA 61.489 55.000 13.80 1.27 43.70 3.53
3836 5288 0.744771 GATGAAGGTCAGGCCGTTCC 60.745 60.000 0.00 0.39 43.70 3.62
3837 5289 0.744771 GGATGAAGGTCAGGCCGTTC 60.745 60.000 0.00 0.00 43.70 3.95
3838 5290 1.299976 GGATGAAGGTCAGGCCGTT 59.700 57.895 0.00 0.00 43.70 4.44
3839 5291 2.990479 GGATGAAGGTCAGGCCGT 59.010 61.111 0.00 0.00 43.70 5.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.