Multiple sequence alignment - TraesCS1D01G083100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G083100 chr1D 100.000 7715 0 0 1537 9251 66192285 66184571 0.000000e+00 14248.0
1 TraesCS1D01G083100 chr1D 100.000 1341 0 0 1 1341 66193821 66192481 0.000000e+00 2477.0
2 TraesCS1D01G083100 chr1D 91.213 478 39 2 2267 2744 66271305 66271779 0.000000e+00 647.0
3 TraesCS1D01G083100 chr1D 91.006 467 35 5 2740 3205 66276925 66277385 2.840000e-174 623.0
4 TraesCS1D01G083100 chr1D 86.784 227 8 7 2052 2276 66271050 66271256 5.590000e-57 233.0
5 TraesCS1D01G083100 chr1D 89.241 158 13 3 3447 3603 66277539 66277693 2.640000e-45 195.0
6 TraesCS1D01G083100 chr1D 88.776 98 10 1 3628 3725 482078167 482078263 1.630000e-22 119.0
7 TraesCS1D01G083100 chr1D 81.928 83 8 3 3337 3416 66277448 66277526 7.760000e-06 63.9
8 TraesCS1D01G083100 chr1D 97.297 37 0 1 1284 1320 66192193 66192158 2.790000e-05 62.1
9 TraesCS1D01G083100 chr1B 93.220 2065 86 23 5207 7229 106794044 106791992 0.000000e+00 2988.0
10 TraesCS1D01G083100 chr1B 93.329 1484 61 14 7335 8809 106791991 106790537 0.000000e+00 2158.0
11 TraesCS1D01G083100 chr1B 93.682 1187 52 8 2335 3501 106798796 106797613 0.000000e+00 1755.0
12 TraesCS1D01G083100 chr1B 92.740 1102 72 2 4046 5147 106795593 106794500 0.000000e+00 1585.0
13 TraesCS1D01G083100 chr1B 88.871 1213 94 18 1 1202 621580610 621579428 0.000000e+00 1454.0
14 TraesCS1D01G083100 chr1B 91.852 540 34 5 2392 2927 106882487 106881954 0.000000e+00 745.0
15 TraesCS1D01G083100 chr1B 85.200 500 42 15 1537 2033 621579256 621578786 1.400000e-132 484.0
16 TraesCS1D01G083100 chr1B 89.803 304 22 2 2037 2339 106808116 106807821 1.890000e-101 381.0
17 TraesCS1D01G083100 chr1B 83.427 356 22 13 3650 3978 106795945 106795600 7.020000e-76 296.0
18 TraesCS1D01G083100 chr1B 86.617 269 19 5 2034 2298 106884874 106884619 1.970000e-71 281.0
19 TraesCS1D01G083100 chr1B 94.167 120 3 2 3497 3614 106796382 106796265 7.380000e-41 180.0
20 TraesCS1D01G083100 chr1B 95.833 96 4 0 2392 2487 106883401 106883306 1.240000e-33 156.0
21 TraesCS1D01G083100 chr1B 86.735 98 12 1 3628 3725 393535915 393535819 3.530000e-19 108.0
22 TraesCS1D01G083100 chr1B 84.615 104 6 2 8957 9059 106770049 106769955 2.750000e-15 95.3
23 TraesCS1D01G083100 chr1B 100.000 29 0 0 1313 1341 621579205 621579177 5.000000e-03 54.7
24 TraesCS1D01G083100 chr1A 94.856 1594 64 6 7271 8857 64714382 64712800 0.000000e+00 2473.0
25 TraesCS1D01G083100 chr1A 93.502 1385 52 15 5914 7271 64715795 64714422 0.000000e+00 2025.0
26 TraesCS1D01G083100 chr1A 90.143 700 46 8 2547 3231 64811096 64811787 0.000000e+00 889.0
27 TraesCS1D01G083100 chr1A 77.258 620 100 24 4224 4836 64816954 64817539 8.960000e-85 326.0
28 TraesCS1D01G083100 chr1A 92.040 201 16 0 8859 9059 64712572 64712372 5.470000e-72 283.0
29 TraesCS1D01G083100 chr1A 79.767 257 51 1 4864 5120 64817767 64818022 1.590000e-42 185.0
30 TraesCS1D01G083100 chr1A 77.358 318 61 9 4866 5175 508625730 508626044 2.650000e-40 178.0
31 TraesCS1D01G083100 chr1A 75.170 294 50 17 3943 4228 64812067 64812345 5.870000e-22 117.0
32 TraesCS1D01G083100 chr1A 88.889 90 2 4 2059 2141 64810998 64811086 4.570000e-18 104.0
33 TraesCS1D01G083100 chr1A 85.915 71 7 2 3298 3368 64896361 64896294 1.290000e-08 73.1
34 TraesCS1D01G083100 chr1A 93.182 44 1 2 3483 3525 64811948 64811990 7.760000e-06 63.9
35 TraesCS1D01G083100 chr7D 98.809 1343 11 5 1 1341 108295572 108294233 0.000000e+00 2386.0
36 TraesCS1D01G083100 chr7D 97.778 990 15 5 1 988 108254037 108253053 0.000000e+00 1700.0
37 TraesCS1D01G083100 chr7D 98.108 793 12 3 1 792 21675380 21674590 0.000000e+00 1378.0
38 TraesCS1D01G083100 chr7D 97.160 493 13 1 849 1341 21674531 21674040 0.000000e+00 832.0
39 TraesCS1D01G083100 chr7D 94.488 508 17 3 1537 2033 21673995 21673488 0.000000e+00 773.0
40 TraesCS1D01G083100 chr7D 94.269 506 20 4 1543 2040 108294203 108293699 0.000000e+00 765.0
41 TraesCS1D01G083100 chr7D 86.745 513 13 10 1537 2039 108243060 108242593 3.830000e-143 520.0
42 TraesCS1D01G083100 chr7D 92.201 359 11 2 984 1341 108243447 108243105 8.350000e-135 492.0
43 TraesCS1D01G083100 chr7D 88.889 99 10 1 3627 3725 5197926 5197829 4.540000e-23 121.0
44 TraesCS1D01G083100 chr7D 83.495 103 12 1 5505 5607 626205515 626205612 3.560000e-14 91.6
45 TraesCS1D01G083100 chr5D 97.394 1343 16 4 1 1341 420303804 420302479 0.000000e+00 2268.0
46 TraesCS1D01G083100 chr5D 97.177 1346 15 6 1 1341 30627641 30626314 0.000000e+00 2254.0
47 TraesCS1D01G083100 chr5D 93.439 503 12 10 1537 2033 420302434 420301947 0.000000e+00 726.0
48 TraesCS1D01G083100 chr5D 88.386 508 15 7 1537 2033 30626269 30625795 1.040000e-158 571.0
49 TraesCS1D01G083100 chr5D 93.182 44 3 0 3682 3725 340967788 340967831 2.160000e-06 65.8
50 TraesCS1D01G083100 chr5D 97.297 37 0 1 1284 1320 30626168 30626133 2.790000e-05 62.1
51 TraesCS1D01G083100 chr5D 100.000 29 0 0 1313 1341 420302383 420302355 5.000000e-03 54.7
52 TraesCS1D01G083100 chr2D 95.981 1244 23 6 1 1241 343136802 343135583 0.000000e+00 1995.0
53 TraesCS1D01G083100 chr2D 96.788 716 6 2 627 1341 343135572 343134873 0.000000e+00 1179.0
54 TraesCS1D01G083100 chr2D 86.576 514 15 9 1537 2040 343134783 343134314 1.380000e-142 518.0
55 TraesCS1D01G083100 chr4B 89.836 1279 98 19 3 1270 638487495 638486238 0.000000e+00 1613.0
56 TraesCS1D01G083100 chr4B 85.913 504 48 14 1537 2028 638486162 638485670 4.950000e-142 516.0
57 TraesCS1D01G083100 chr4B 87.755 98 11 1 3628 3725 462510357 462510453 7.590000e-21 113.0
58 TraesCS1D01G083100 chr6A 89.335 1294 82 28 1 1271 615398314 615397054 0.000000e+00 1574.0
59 TraesCS1D01G083100 chr6A 88.953 516 43 9 1537 2040 615396993 615396480 7.890000e-175 625.0
60 TraesCS1D01G083100 chr6A 86.735 98 12 1 3628 3725 5223026 5223122 3.530000e-19 108.0
61 TraesCS1D01G083100 chr6A 100.000 29 0 0 1313 1341 615396943 615396915 5.000000e-03 54.7
62 TraesCS1D01G083100 chr3B 89.136 1215 97 18 1 1202 18004652 18003460 0.000000e+00 1480.0
63 TraesCS1D01G083100 chr3B 85.741 526 43 16 1537 2033 18003288 18002766 2.290000e-145 527.0
64 TraesCS1D01G083100 chr3B 81.818 286 38 6 8258 8532 756182649 756182367 2.600000e-55 228.0
65 TraesCS1D01G083100 chr3B 81.818 242 35 6 8252 8491 755042087 755042321 2.640000e-45 195.0
66 TraesCS1D01G083100 chr3B 78.049 246 49 5 4877 5119 821655157 821655400 5.790000e-32 150.0
67 TraesCS1D01G083100 chr3B 79.545 220 34 3 8320 8531 754979558 754979774 7.490000e-31 147.0
68 TraesCS1D01G083100 chr3B 88.000 50 4 2 5374 5422 819889305 819889257 3.610000e-04 58.4
69 TraesCS1D01G083100 chr3A 92.220 1054 56 16 1 1047 735471106 735472140 0.000000e+00 1469.0
70 TraesCS1D01G083100 chr3A 86.948 498 39 18 1537 2024 735472291 735472772 3.800000e-148 536.0
71 TraesCS1D01G083100 chr3A 80.272 294 40 9 8252 8532 700575348 700575636 1.220000e-48 206.0
72 TraesCS1D01G083100 chr3A 89.000 100 8 2 1936 2033 58843489 58843587 4.540000e-23 121.0
73 TraesCS1D01G083100 chr3A 86.735 98 12 1 3628 3725 624761053 624760957 3.530000e-19 108.0
74 TraesCS1D01G083100 chr3A 97.297 37 1 0 1284 1320 735472386 735472422 7.760000e-06 63.9
75 TraesCS1D01G083100 chr7B 90.693 1053 73 13 3 1048 712613928 712614962 0.000000e+00 1378.0
76 TraesCS1D01G083100 chr7B 85.149 101 14 1 3625 3725 609192726 609192627 1.640000e-17 102.0
77 TraesCS1D01G083100 chr7B 92.157 51 4 0 5505 5555 725998479 725998529 1.290000e-08 73.1
78 TraesCS1D01G083100 chr2A 82.487 394 40 15 878 1268 52235209 52235576 1.500000e-82 318.0
79 TraesCS1D01G083100 chr2A 81.980 394 41 15 878 1268 52227028 52226662 3.240000e-79 307.0
80 TraesCS1D01G083100 chr3D 82.192 292 38 10 8252 8532 569546404 569546692 1.200000e-58 239.0
81 TraesCS1D01G083100 chr3D 83.544 237 32 7 8258 8491 567216944 567216712 2.020000e-51 215.0
82 TraesCS1D01G083100 chr3D 73.802 313 63 15 4877 5185 609977883 609978180 1.270000e-18 106.0
83 TraesCS1D01G083100 chrUn 81.533 287 36 10 8258 8532 41101741 41101460 4.350000e-53 220.0
84 TraesCS1D01G083100 chr5A 86.325 117 14 2 5379 5494 14375431 14375316 9.750000e-25 126.0
85 TraesCS1D01G083100 chr6D 86.000 100 13 1 5505 5604 83484386 83484484 1.270000e-18 106.0
86 TraesCS1D01G083100 chr2B 94.737 38 2 0 7291 7328 714255945 714255908 1.000000e-04 60.2
87 TraesCS1D01G083100 chr2B 94.737 38 2 0 7291 7328 714310940 714310903 1.000000e-04 60.2
88 TraesCS1D01G083100 chr2B 100.000 28 0 0 7293 7320 7951962 7951935 1.700000e-02 52.8
89 TraesCS1D01G083100 chr2B 100.000 28 0 0 7293 7320 7982931 7982904 1.700000e-02 52.8
90 TraesCS1D01G083100 chr2B 100.000 28 0 0 7293 7320 8031762 8031735 1.700000e-02 52.8
91 TraesCS1D01G083100 chr2B 100.000 28 0 0 7293 7320 8120706 8120679 1.700000e-02 52.8
92 TraesCS1D01G083100 chr2B 100.000 28 0 0 7293 7320 8147614 8147587 1.700000e-02 52.8
93 TraesCS1D01G083100 chr2B 100.000 28 0 0 7293 7320 8195643 8195616 1.700000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G083100 chr1D 66184571 66193821 9250 True 5595.700000 14248 99.099000 1 9251 3 chr1D.!!$R1 9250
1 TraesCS1D01G083100 chr1D 66271050 66271779 729 False 440.000000 647 88.998500 2052 2744 2 chr1D.!!$F2 692
2 TraesCS1D01G083100 chr1D 66276925 66277693 768 False 293.966667 623 87.391667 2740 3603 3 chr1D.!!$F3 863
3 TraesCS1D01G083100 chr1B 106790537 106798796 8259 True 1493.666667 2988 91.760833 2335 8809 6 chr1B.!!$R4 6474
4 TraesCS1D01G083100 chr1B 621578786 621580610 1824 True 664.233333 1454 91.357000 1 2033 3 chr1B.!!$R6 2032
5 TraesCS1D01G083100 chr1B 106881954 106884874 2920 True 394.000000 745 91.434000 2034 2927 3 chr1B.!!$R5 893
6 TraesCS1D01G083100 chr1A 64712372 64715795 3423 True 1593.666667 2473 93.466000 5914 9059 3 chr1A.!!$R2 3145
7 TraesCS1D01G083100 chr1A 64810998 64812345 1347 False 293.475000 889 86.846000 2059 4228 4 chr1A.!!$F2 2169
8 TraesCS1D01G083100 chr1A 64816954 64818022 1068 False 255.500000 326 78.512500 4224 5120 2 chr1A.!!$F3 896
9 TraesCS1D01G083100 chr7D 108253053 108254037 984 True 1700.000000 1700 97.778000 1 988 1 chr7D.!!$R2 987
10 TraesCS1D01G083100 chr7D 108293699 108295572 1873 True 1575.500000 2386 96.539000 1 2040 2 chr7D.!!$R5 2039
11 TraesCS1D01G083100 chr7D 21673488 21675380 1892 True 994.333333 1378 96.585333 1 2033 3 chr7D.!!$R3 2032
12 TraesCS1D01G083100 chr7D 108242593 108243447 854 True 506.000000 520 89.473000 984 2039 2 chr7D.!!$R4 1055
13 TraesCS1D01G083100 chr5D 420301947 420303804 1857 True 1016.233333 2268 96.944333 1 2033 3 chr5D.!!$R2 2032
14 TraesCS1D01G083100 chr5D 30625795 30627641 1846 True 962.366667 2254 94.286667 1 2033 3 chr5D.!!$R1 2032
15 TraesCS1D01G083100 chr2D 343134314 343136802 2488 True 1230.666667 1995 93.115000 1 2040 3 chr2D.!!$R1 2039
16 TraesCS1D01G083100 chr4B 638485670 638487495 1825 True 1064.500000 1613 87.874500 3 2028 2 chr4B.!!$R1 2025
17 TraesCS1D01G083100 chr6A 615396480 615398314 1834 True 751.233333 1574 92.762667 1 2040 3 chr6A.!!$R1 2039
18 TraesCS1D01G083100 chr3B 18002766 18004652 1886 True 1003.500000 1480 87.438500 1 2033 2 chr3B.!!$R3 2032
19 TraesCS1D01G083100 chr3A 735471106 735472772 1666 False 689.633333 1469 92.155000 1 2024 3 chr3A.!!$F3 2023
20 TraesCS1D01G083100 chr7B 712613928 712614962 1034 False 1378.000000 1378 90.693000 3 1048 1 chr7B.!!$F1 1045

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
34 35 7.203255 TCATGTACATATCGTTCTGTAGAGG 57.797 40.000 8.32 0.0 0.00 3.69 F
1560 2304 1.980765 TCCTTCCTCTGCTCACATTGT 59.019 47.619 0.00 0.0 0.00 2.71 F
2040 2828 0.466189 CCAGGCGCTCCCATACAAAT 60.466 55.000 7.64 0.0 35.39 2.32 F
4021 8608 0.032952 CTCGGACCGGACAACTTCAA 59.967 55.000 15.25 0.0 0.00 2.69 F
4697 9290 0.672401 CAATACCCGTTGCACGTCCT 60.672 55.000 7.68 0.0 40.58 3.85 F
4981 9774 0.037590 TGGCACACCTCCACCATAAC 59.962 55.000 0.00 0.0 36.63 1.89 F
5778 10969 0.104120 TCATAGATTGTCGCGGGTGG 59.896 55.000 6.13 0.0 0.00 4.61 F
7045 12277 0.034896 GGTGACCGTCATCTGGTTGT 59.965 55.000 4.13 0.0 40.63 3.32 F
7178 12420 0.167689 CCGCTGCTTCTTTTGCTCTC 59.832 55.000 0.00 0.0 0.00 3.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1898 2682 1.543429 CCTTTCTCCCTCGCACAAAGT 60.543 52.381 0.00 0.00 0.00 2.66 R
3114 6097 1.027255 CAACCACAACCACCGTCACA 61.027 55.000 0.00 0.00 0.00 3.58 R
4038 8625 0.110486 ACCGGACAAAGCCAATGTCT 59.890 50.000 9.46 0.00 45.13 3.41 R
4828 9421 0.318360 CACGGTTGCACTCTCGTACA 60.318 55.000 0.00 0.00 34.31 2.90 R
5746 10937 0.395311 TCTATGAACGCCCGACTCCT 60.395 55.000 0.00 0.00 0.00 3.69 R
6951 12183 0.873054 CTGAGCAGAACACAAGGCAG 59.127 55.000 0.00 0.00 0.00 4.85 R
7683 12969 1.066573 AGAGGACTCCAATTGACTGCG 60.067 52.381 7.12 0.00 0.00 5.18 R
8036 13328 0.593128 ACAGAACAATGCTTGGACGC 59.407 50.000 1.84 0.00 34.12 5.19 R
9138 14659 0.100682 CATCTTGGCATGCAGCTCAC 59.899 55.000 21.36 0.64 44.79 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 7.203255 TCATGTACATATCGTTCTGTAGAGG 57.797 40.000 8.32 0.00 0.00 3.69
1187 1908 9.646427 GAAAGATACTACAAGAACAGAGACAAT 57.354 33.333 0.00 0.00 0.00 2.71
1560 2304 1.980765 TCCTTCCTCTGCTCACATTGT 59.019 47.619 0.00 0.00 0.00 2.71
1876 2659 3.306472 AACAACAGAACAAAGGGCCTA 57.694 42.857 6.41 0.00 0.00 3.93
1898 2682 3.650942 AGATTGTATTCGGCCCAATAGGA 59.349 43.478 2.67 0.00 38.24 2.94
1908 2692 1.948611 GCCCAATAGGACTTTGTGCGA 60.949 52.381 0.00 0.00 38.24 5.10
2005 2793 7.278868 GTCATTCGACTGAGACCAATCTATTTT 59.721 37.037 5.61 0.00 39.22 1.82
2036 2824 1.523938 GTTCCAGGCGCTCCCATAC 60.524 63.158 7.64 0.00 35.39 2.39
2040 2828 0.466189 CCAGGCGCTCCCATACAAAT 60.466 55.000 7.64 0.00 35.39 2.32
2041 2829 1.202758 CCAGGCGCTCCCATACAAATA 60.203 52.381 7.64 0.00 35.39 1.40
2042 2830 2.146342 CAGGCGCTCCCATACAAATAG 58.854 52.381 7.64 0.00 35.39 1.73
2043 2831 1.768870 AGGCGCTCCCATACAAATAGT 59.231 47.619 7.64 0.00 35.39 2.12
2044 2832 2.969950 AGGCGCTCCCATACAAATAGTA 59.030 45.455 7.64 0.00 37.06 1.82
2045 2833 3.006967 AGGCGCTCCCATACAAATAGTAG 59.993 47.826 7.64 0.00 35.85 2.57
2050 2838 5.480205 GCTCCCATACAAATAGTAGGTAGC 58.520 45.833 0.00 0.00 35.73 3.58
2057 2845 1.339097 AATAGTAGGTAGCTGCCGGG 58.661 55.000 15.76 0.00 0.00 5.73
2083 2871 8.089115 AGCAACTTACTGAATTGTCTAGTTTC 57.911 34.615 0.00 0.00 0.00 2.78
2205 3007 3.799755 GCCACCATTGTCGCCGAC 61.800 66.667 10.96 10.96 0.00 4.79
2206 3008 3.487202 CCACCATTGTCGCCGACG 61.487 66.667 13.18 0.23 42.01 5.12
2215 3017 2.483745 TCGCCGACGATGTCAGTC 59.516 61.111 0.00 0.00 45.12 3.51
2216 3018 2.178273 CGCCGACGATGTCAGTCA 59.822 61.111 0.00 0.00 43.93 3.41
2244 3046 3.581332 CCTCCAGTAGTGTTCTTGGGTTA 59.419 47.826 0.00 0.00 0.00 2.85
2265 3067 0.865769 GGTGGTAGTTCTTGCACACG 59.134 55.000 0.00 0.00 0.00 4.49
2316 3176 1.159285 CAGTCATGACCACGCACAAT 58.841 50.000 22.21 0.00 0.00 2.71
2318 3178 2.938451 CAGTCATGACCACGCACAATAT 59.062 45.455 22.21 0.00 0.00 1.28
2324 3184 1.468520 GACCACGCACAATATTGCTGT 59.531 47.619 15.48 8.47 40.62 4.40
2329 3189 3.009026 ACGCACAATATTGCTGTCATCA 58.991 40.909 15.48 0.00 40.62 3.07
2330 3190 3.628942 ACGCACAATATTGCTGTCATCAT 59.371 39.130 15.48 0.00 40.62 2.45
2331 3191 4.216731 CGCACAATATTGCTGTCATCATC 58.783 43.478 15.48 0.00 40.62 2.92
2387 3247 1.899437 ATTGCGTCCTCCACCGTCAT 61.899 55.000 0.00 0.00 0.00 3.06
2408 5366 2.194056 CGGGAAGGCCATCAGCAT 59.806 61.111 10.67 0.00 46.50 3.79
2409 5367 1.895707 CGGGAAGGCCATCAGCATC 60.896 63.158 10.67 0.00 46.50 3.91
2566 5524 4.367023 GCACGGCGAGGTACACCA 62.367 66.667 16.62 0.00 38.89 4.17
2630 5588 1.300465 CGATCTCACCCGGAGCATG 60.300 63.158 0.73 0.00 43.70 4.06
3114 6097 1.561076 TCCATTGAGCTGGTATGCACT 59.439 47.619 0.00 0.00 37.57 4.40
3140 6129 1.683629 GGTGGTTGTGGTTGTGGAGAA 60.684 52.381 0.00 0.00 0.00 2.87
3193 6182 1.631071 GCCTGGGAAGAGGAGGGAAG 61.631 65.000 0.00 0.00 34.69 3.46
3298 6303 2.555547 GCAGCTCCCAACAGCGTTT 61.556 57.895 0.00 0.00 44.82 3.60
3327 6340 5.166398 GTCTAGCTAGTCTATCGTCTCTCC 58.834 50.000 20.10 0.00 0.00 3.71
3332 6345 3.222173 AGTCTATCGTCTCTCCTGCAT 57.778 47.619 0.00 0.00 0.00 3.96
3361 6378 0.386476 CACCGGAATGGAATGGCATG 59.614 55.000 9.46 0.00 42.00 4.06
3365 6382 0.761702 GGAATGGAATGGCATGGGCT 60.762 55.000 0.00 0.00 40.87 5.19
3368 6385 0.757935 ATGGAATGGCATGGGCTCAC 60.758 55.000 0.00 0.00 40.87 3.51
3454 6488 0.895100 AGCTTGCGCTTGGATGGAAA 60.895 50.000 9.73 0.00 46.47 3.13
3467 6501 3.446873 TGGATGGAAATAATGGTGTGCAC 59.553 43.478 10.75 10.75 0.00 4.57
3527 7800 1.299014 GCTCGCCGTCATGAGAGAG 60.299 63.158 12.56 11.36 34.04 3.20
3528 7801 1.719725 GCTCGCCGTCATGAGAGAGA 61.720 60.000 16.53 8.52 34.04 3.10
3542 7815 7.390440 GTCATGAGAGAGATGTACTAGTAGCAT 59.610 40.741 1.87 9.83 0.00 3.79
3618 7913 3.480825 CGCGTTTTACTTTACTGCGGTAG 60.481 47.826 5.36 0.00 40.36 3.18
3642 7937 4.897051 AGTATGTTACTCCCTCCCTTCAT 58.103 43.478 0.00 0.00 32.47 2.57
3702 8263 3.564235 TTGCATGCTGTCTGAAATGTC 57.436 42.857 20.33 0.00 0.00 3.06
3708 8269 5.673068 GCATGCTGTCTGAAATGTCTACAAG 60.673 44.000 11.37 0.00 0.00 3.16
3709 8270 5.213891 TGCTGTCTGAAATGTCTACAAGA 57.786 39.130 0.00 0.00 0.00 3.02
3716 8277 9.031537 TGTCTGAAATGTCTACAAGACCTTATA 57.968 33.333 4.69 0.00 44.44 0.98
3717 8278 9.522804 GTCTGAAATGTCTACAAGACCTTATAG 57.477 37.037 4.69 4.24 44.44 1.31
3729 8294 8.107196 ACAAGACCTTATAGAAATGAAGGGAT 57.893 34.615 4.99 0.00 43.47 3.85
3766 8335 1.293498 GCCACCAAAGCGAGAGAGA 59.707 57.895 0.00 0.00 0.00 3.10
3798 8367 1.303561 GACATGAGCAGGTTGGCCA 60.304 57.895 0.00 0.00 37.19 5.36
3824 8393 4.034258 CGTGGTGCCTGCTGCTTG 62.034 66.667 0.00 0.00 42.00 4.01
3930 8517 2.358737 CTTGGACGGTGGCCAGAC 60.359 66.667 5.11 0.16 36.64 3.51
3962 8549 2.741878 CGGTTAATGATTGAGGAGCCGT 60.742 50.000 0.00 0.00 32.99 5.68
4018 8605 0.974383 AATCTCGGACCGGACAACTT 59.026 50.000 15.25 0.00 0.00 2.66
4019 8606 0.531200 ATCTCGGACCGGACAACTTC 59.469 55.000 15.25 0.00 0.00 3.01
4020 8607 0.824595 TCTCGGACCGGACAACTTCA 60.825 55.000 15.25 0.00 0.00 3.02
4021 8608 0.032952 CTCGGACCGGACAACTTCAA 59.967 55.000 15.25 0.00 0.00 2.69
4023 8610 1.134461 TCGGACCGGACAACTTCAAAA 60.134 47.619 15.25 0.00 0.00 2.44
4024 8611 1.671845 CGGACCGGACAACTTCAAAAA 59.328 47.619 9.46 0.00 0.00 1.94
4042 8629 2.270352 AAAAGGATCGCAACCAGACA 57.730 45.000 0.00 0.00 0.00 3.41
4044 8631 2.496899 AAGGATCGCAACCAGACATT 57.503 45.000 0.00 0.00 0.00 2.71
4066 8653 1.814248 GCTTTGTCCGGTTTCTGTCCT 60.814 52.381 0.00 0.00 0.00 3.85
4096 8683 3.616821 CGGTAAAATGAAGATGAGCGTCA 59.383 43.478 0.00 0.00 39.31 4.35
4110 8698 1.074319 GCGTCAGTTTACGATCGCCA 61.074 55.000 16.60 0.00 45.68 5.69
4158 8746 6.584563 CCCGACACATTTTAAATACTGTTTGG 59.415 38.462 0.00 2.60 0.00 3.28
4181 8770 8.527567 TGGATTTGAAACTTAAATTTAAGCCG 57.472 30.769 29.54 13.91 42.98 5.52
4360 8949 2.159627 GCCGTCTTCATTTCATGTCGTT 59.840 45.455 0.00 0.00 0.00 3.85
4430 9019 3.491598 CTGTCAAAGGTGGGCGGGT 62.492 63.158 0.00 0.00 0.00 5.28
4599 9192 2.034221 GGACTGCCCCTCCAACAC 59.966 66.667 0.00 0.00 0.00 3.32
4657 9250 3.496875 CTCCTCGAGCTGCGGGATG 62.497 68.421 6.99 0.00 45.56 3.51
4685 9278 1.685355 GCCCCCATGCAACAATACCC 61.685 60.000 0.00 0.00 0.00 3.69
4697 9290 0.672401 CAATACCCGTTGCACGTCCT 60.672 55.000 7.68 0.00 40.58 3.85
4715 9308 2.440599 GGGCATCCCACTGGTTGT 59.559 61.111 0.00 0.00 44.65 3.32
4783 9376 0.952280 CCTACTCTTCGGCGCTCATA 59.048 55.000 7.64 0.00 0.00 2.15
4836 9429 3.376078 GGGCGTGGGTGTACGAGA 61.376 66.667 2.14 0.00 46.46 4.04
4877 9670 1.450312 GACAGGGATTGGCACCTCG 60.450 63.158 0.00 0.00 34.05 4.63
4919 9712 2.579201 CAGCCGTTCGGGAGATGT 59.421 61.111 13.16 0.00 39.57 3.06
4920 9713 1.079127 CAGCCGTTCGGGAGATGTT 60.079 57.895 13.16 0.00 39.57 2.71
4981 9774 0.037590 TGGCACACCTCCACCATAAC 59.962 55.000 0.00 0.00 36.63 1.89
5000 9793 4.522689 TACGGCCACATGCGCGAT 62.523 61.111 12.10 0.00 42.61 4.58
5034 9827 2.046285 AAAATGGAGAAGGCGGCGG 61.046 57.895 9.78 0.00 0.00 6.13
5122 9915 0.625980 TTCCACATCCCCATGGCCTA 60.626 55.000 6.09 0.00 35.81 3.93
5154 9947 4.541648 GGAGGGAGGGCGGCTCTA 62.542 72.222 0.28 0.00 0.00 2.43
5155 9948 2.915137 GAGGGAGGGCGGCTCTAG 60.915 72.222 0.28 0.00 0.00 2.43
5156 9949 4.548513 AGGGAGGGCGGCTCTAGG 62.549 72.222 0.28 0.00 0.00 3.02
5163 9956 3.972276 GCGGCTCTAGGGCTCGAG 61.972 72.222 24.03 8.45 38.46 4.04
5166 9959 3.213402 GCTCTAGGGCTCGAGCGT 61.213 66.667 29.81 21.76 42.62 5.07
5167 9960 2.718731 CTCTAGGGCTCGAGCGTG 59.281 66.667 29.81 18.79 43.26 5.34
5168 9961 2.045242 TCTAGGGCTCGAGCGTGT 60.045 61.111 29.81 18.93 43.26 4.49
5169 9962 2.054140 CTCTAGGGCTCGAGCGTGTC 62.054 65.000 29.81 18.61 43.26 3.67
5201 9994 2.777146 GGGGGAGGGGCATTGAAA 59.223 61.111 0.00 0.00 0.00 2.69
5202 9995 1.381735 GGGGGAGGGGCATTGAAAG 60.382 63.158 0.00 0.00 0.00 2.62
5203 9996 1.697297 GGGGAGGGGCATTGAAAGA 59.303 57.895 0.00 0.00 0.00 2.52
5204 9997 0.396278 GGGGAGGGGCATTGAAAGAG 60.396 60.000 0.00 0.00 0.00 2.85
5205 9998 0.332972 GGGAGGGGCATTGAAAGAGT 59.667 55.000 0.00 0.00 0.00 3.24
5206 9999 1.467920 GGAGGGGCATTGAAAGAGTG 58.532 55.000 0.00 0.00 0.00 3.51
5207 10000 1.272147 GGAGGGGCATTGAAAGAGTGT 60.272 52.381 0.00 0.00 0.00 3.55
5208 10001 2.087646 GAGGGGCATTGAAAGAGTGTC 58.912 52.381 0.00 0.00 0.00 3.67
5209 10002 0.804989 GGGGCATTGAAAGAGTGTCG 59.195 55.000 0.00 0.00 0.00 4.35
5210 10003 1.610624 GGGGCATTGAAAGAGTGTCGA 60.611 52.381 0.00 0.00 0.00 4.20
5211 10004 2.359900 GGGCATTGAAAGAGTGTCGAT 58.640 47.619 0.00 0.00 0.00 3.59
5215 10402 5.177696 GGGCATTGAAAGAGTGTCGATATAC 59.822 44.000 0.00 0.00 0.00 1.47
5242 10429 6.319911 GCTAGAGCTTTGGAAGTGGATTAAAT 59.680 38.462 0.00 0.00 38.21 1.40
5256 10443 3.446873 GGATTAAATGGTCCATGCACACA 59.553 43.478 4.74 0.00 34.57 3.72
5276 10463 3.057526 ACAGCTTCGCCATTAAAAAGGAC 60.058 43.478 0.00 0.00 0.00 3.85
5282 10469 1.982913 GCCATTAAAAAGGACGCGTTG 59.017 47.619 15.53 3.65 0.00 4.10
5447 10638 0.518636 TACGACGTGTAGGTGTCTGC 59.481 55.000 11.56 0.00 32.93 4.26
5451 10642 2.593257 GACGTGTAGGTGTCTGCTTAC 58.407 52.381 0.00 0.00 32.37 2.34
5468 10659 4.042311 TGCTTACTTGAGGTGAACCCATTA 59.958 41.667 0.00 0.00 36.42 1.90
5495 10686 0.106868 CATGGCTGGCCTCATCAAGA 60.107 55.000 13.05 0.00 36.94 3.02
5500 10691 0.392193 CTGGCCTCATCAAGAAGCGT 60.392 55.000 3.32 0.00 34.39 5.07
5561 10752 1.167851 CGCTGAAGCAAATTCCCTCA 58.832 50.000 2.79 0.00 42.21 3.86
5566 10757 4.326826 CTGAAGCAAATTCCCTCACACTA 58.673 43.478 0.00 0.00 37.08 2.74
5593 10784 4.410400 GGCCGGCCTGTTAGTGCT 62.410 66.667 38.76 0.00 0.00 4.40
5594 10785 2.359975 GCCGGCCTGTTAGTGCTT 60.360 61.111 18.11 0.00 0.00 3.91
5628 10819 5.836821 AGTGAGAAGAAAAAGGTGGAAAC 57.163 39.130 0.00 0.00 0.00 2.78
5632 10823 4.610333 AGAAGAAAAAGGTGGAAACCAGT 58.390 39.130 0.00 0.00 32.34 4.00
5705 10896 3.393800 ACATCAGGTTCTTGTTGACTCG 58.606 45.455 1.17 0.00 0.00 4.18
5714 10905 2.508663 GTTGACTCGTAGCCGCCC 60.509 66.667 0.00 0.00 0.00 6.13
5728 10919 1.735198 CGCCCGCGAAAGTGACTTA 60.735 57.895 8.23 0.00 46.66 2.24
5734 10925 1.641577 GCGAAAGTGACTTAGGCGAT 58.358 50.000 15.86 0.00 0.00 4.58
5768 10959 2.128035 GAGTCGGGCGTTCATAGATTG 58.872 52.381 0.00 0.00 0.00 2.67
5771 10962 0.852777 CGGGCGTTCATAGATTGTCG 59.147 55.000 0.00 0.00 0.00 4.35
5778 10969 0.104120 TCATAGATTGTCGCGGGTGG 59.896 55.000 6.13 0.00 0.00 4.61
5779 10970 0.880278 CATAGATTGTCGCGGGTGGG 60.880 60.000 6.13 0.00 0.00 4.61
5789 10980 2.046285 GCGGGTGGGGATGAGTTTG 61.046 63.158 0.00 0.00 0.00 2.93
5887 11078 6.503560 TCTTAGGGGAACTTTGTAACTTGA 57.496 37.500 0.00 0.00 0.00 3.02
5908 11099 9.178758 ACTTGATAGAGAAGAAACAAAACAAGT 57.821 29.630 0.00 0.00 38.34 3.16
6039 11237 1.674322 CCGACCCAACGAGGCAATT 60.674 57.895 0.00 0.00 35.39 2.32
6258 11463 4.360951 AGAGTTACCGAGAGATAGAGGG 57.639 50.000 0.00 0.00 0.00 4.30
6260 11465 1.887854 GTTACCGAGAGATAGAGGGGC 59.112 57.143 0.00 0.00 0.00 5.80
6356 11563 1.269102 CGCCTCACCGTAAGTATCCAG 60.269 57.143 0.00 0.00 0.00 3.86
6414 11621 1.272807 TCTTTGGGTTCCCTAGGTCG 58.727 55.000 8.29 0.00 0.00 4.79
6738 11951 1.657822 GGTCGCTCCTGGAAAAGATC 58.342 55.000 0.00 0.00 0.00 2.75
6907 12133 3.088532 GGTACAACAATGGAGAATGCCA 58.911 45.455 0.00 0.00 43.23 4.92
6921 12152 2.496899 ATGCCAGTGAAAACCGATCT 57.503 45.000 0.00 0.00 0.00 2.75
6937 12168 3.317149 CCGATCTATGAAACGGACACCTA 59.683 47.826 0.00 0.00 46.94 3.08
6966 12198 1.884235 ACTACTGCCTTGTGTTCTGC 58.116 50.000 0.00 0.00 0.00 4.26
7045 12277 0.034896 GGTGACCGTCATCTGGTTGT 59.965 55.000 4.13 0.00 40.63 3.32
7137 12369 3.414700 GTCTGGTCCAACGCTGCG 61.415 66.667 21.91 21.91 0.00 5.18
7178 12420 0.167689 CCGCTGCTTCTTTTGCTCTC 59.832 55.000 0.00 0.00 0.00 3.20
7197 12439 2.716424 CTCCCTCATCCTCCTCTACTCT 59.284 54.545 0.00 0.00 0.00 3.24
7251 12493 2.866762 GAGGATCGATCTTTTCCGGTTG 59.133 50.000 23.96 0.00 34.61 3.77
7266 12508 6.746745 TTCCGGTTGTGAAAGATAATTACC 57.253 37.500 0.00 0.00 0.00 2.85
7275 12557 8.026396 TGTGAAAGATAATTACCCCCTACTAC 57.974 38.462 0.00 0.00 0.00 2.73
7286 12568 4.876580 ACCCCCTACTACCTTTGTACTAG 58.123 47.826 0.00 0.00 0.00 2.57
7289 12571 4.892345 CCCCTACTACCTTTGTACTAGACC 59.108 50.000 0.00 0.00 0.00 3.85
7294 12576 1.549170 ACCTTTGTACTAGACCAGCGG 59.451 52.381 0.00 0.00 0.00 5.52
7306 12588 2.434336 AGACCAGCGGCAAGTAATATGA 59.566 45.455 1.45 0.00 0.00 2.15
7309 12591 4.207165 ACCAGCGGCAAGTAATATGAATT 58.793 39.130 1.45 0.00 0.00 2.17
7310 12592 4.036734 ACCAGCGGCAAGTAATATGAATTG 59.963 41.667 1.45 0.00 0.00 2.32
7384 12666 5.712917 ACCTTCATTCTTTGGCCGTTAATTA 59.287 36.000 0.00 0.00 0.00 1.40
7611 12893 1.160137 AAGTTGAGTTGCGCCATCTC 58.840 50.000 4.18 10.67 32.62 2.75
7612 12894 0.674895 AGTTGAGTTGCGCCATCTCC 60.675 55.000 4.18 0.00 31.40 3.71
7659 12945 4.983538 TGCAACTTATTTGATGCAGTGTTG 59.016 37.500 0.00 0.00 43.32 3.33
7676 12962 3.437395 GTGTTGTCATACCGGCACAATTA 59.563 43.478 0.00 0.00 32.80 1.40
7683 12969 6.183360 TGTCATACCGGCACAATTAATTTCTC 60.183 38.462 0.00 0.00 0.00 2.87
7830 13122 7.932120 AAGCGTCTGATGTATGTTATTCTAC 57.068 36.000 0.00 0.00 0.00 2.59
7832 13124 8.392372 AGCGTCTGATGTATGTTATTCTACTA 57.608 34.615 0.00 0.00 0.00 1.82
7884 13176 2.087646 GGTCATTCCAAGGTCTTCTGC 58.912 52.381 0.00 0.00 35.97 4.26
7885 13177 2.087646 GTCATTCCAAGGTCTTCTGCC 58.912 52.381 0.00 0.00 0.00 4.85
7900 13192 5.873712 GTCTTCTGCCCATACATATGATCAG 59.126 44.000 10.38 6.94 35.75 2.90
7976 13268 7.865385 TGAAATTTAAATGTGTGCTAACAGACC 59.135 33.333 0.39 0.00 39.28 3.85
7995 13287 3.793559 ACCGTCTACTTACATTGCATCC 58.206 45.455 0.00 0.00 0.00 3.51
8036 13328 8.936864 AGAGAAGTATGGAAAATGAAGTAAACG 58.063 33.333 0.00 0.00 0.00 3.60
8037 13329 7.527457 AGAAGTATGGAAAATGAAGTAAACGC 58.473 34.615 0.00 0.00 0.00 4.84
8047 13339 1.463444 GAAGTAAACGCGTCCAAGCAT 59.537 47.619 14.44 0.00 36.85 3.79
8136 13428 8.047911 CCCATGCTCTATGAGAAATATGAAGAT 58.952 37.037 0.00 0.00 39.21 2.40
8309 13601 0.391263 TCTGCAGCTCAGCACATCAG 60.391 55.000 9.47 0.02 42.56 2.90
8618 13910 6.704289 TCTGATTGCTATTCATTTGGGAAG 57.296 37.500 0.00 0.00 0.00 3.46
8653 13945 9.494271 GCTAACTGATTAATATTCTGTGATCCA 57.506 33.333 0.00 0.00 0.00 3.41
8681 13973 9.930693 GCCTACTATAGTTATATGTTGCTCTTT 57.069 33.333 11.40 0.00 0.00 2.52
8739 14034 7.308109 GGGACATCAGTTTAATTGAACACGTTA 60.308 37.037 14.74 0.00 31.94 3.18
8771 14066 7.647907 TTTAGTTTCTACCTAAGTTTGAGCG 57.352 36.000 0.00 0.00 0.00 5.03
8841 14136 4.098914 TCCTCTTTTGCTTTAGCTTGGA 57.901 40.909 0.00 0.00 42.66 3.53
8842 14137 4.469657 TCCTCTTTTGCTTTAGCTTGGAA 58.530 39.130 0.00 0.00 42.66 3.53
8896 14417 6.344500 CAACAATGCTATCCTCTAGTGAAGT 58.656 40.000 0.00 0.00 0.00 3.01
8920 14441 9.344772 AGTAACTGATCACTTTCTCGTCTATAT 57.655 33.333 0.00 0.00 0.00 0.86
8921 14442 9.388346 GTAACTGATCACTTTCTCGTCTATATG 57.612 37.037 0.00 0.00 0.00 1.78
8945 14466 1.001068 TGCACCACCATTCATTTGCAG 59.999 47.619 0.00 0.00 35.13 4.41
8946 14467 1.273048 GCACCACCATTCATTTGCAGA 59.727 47.619 0.00 0.00 0.00 4.26
8966 14487 9.620259 TTGCAGAATAATATACAACATACACCA 57.380 29.630 0.00 0.00 0.00 4.17
8999 14520 4.563786 GGCAAGCTAGTTAGAACTTGGTCT 60.564 45.833 8.59 0.00 40.54 3.85
9000 14521 4.390297 GCAAGCTAGTTAGAACTTGGTCTG 59.610 45.833 8.59 9.78 40.54 3.51
9014 14535 4.680237 TCTGGAACTGGCACGGCG 62.680 66.667 4.80 4.80 39.14 6.46
9053 14574 1.659335 CGCACACTAACACGACGGT 60.659 57.895 0.00 0.00 0.00 4.83
9085 14606 4.804608 TTTCATGAAAACACGACGATGT 57.195 36.364 18.45 0.00 0.00 3.06
9086 14607 3.786657 TCATGAAAACACGACGATGTG 57.213 42.857 0.00 9.63 45.41 3.21
9087 14608 2.478514 TCATGAAAACACGACGATGTGG 59.521 45.455 0.00 0.00 44.21 4.17
9088 14609 1.222300 TGAAAACACGACGATGTGGG 58.778 50.000 0.00 0.00 44.21 4.61
9089 14610 0.110373 GAAAACACGACGATGTGGGC 60.110 55.000 0.00 0.00 44.21 5.36
9090 14611 1.512156 AAAACACGACGATGTGGGCC 61.512 55.000 0.00 0.00 44.21 5.80
9091 14612 2.391724 AAACACGACGATGTGGGCCT 62.392 55.000 4.53 0.00 44.21 5.19
9092 14613 1.537814 AACACGACGATGTGGGCCTA 61.538 55.000 4.53 0.00 44.21 3.93
9093 14614 1.216977 CACGACGATGTGGGCCTAA 59.783 57.895 4.53 0.00 36.20 2.69
9094 14615 0.806102 CACGACGATGTGGGCCTAAG 60.806 60.000 4.53 0.00 36.20 2.18
9095 14616 1.883084 CGACGATGTGGGCCTAAGC 60.883 63.158 4.53 0.00 38.76 3.09
9096 14617 1.220749 GACGATGTGGGCCTAAGCA 59.779 57.895 4.53 0.00 42.56 3.91
9097 14618 0.811616 GACGATGTGGGCCTAAGCAG 60.812 60.000 4.53 0.00 42.56 4.24
9098 14619 1.524621 CGATGTGGGCCTAAGCAGG 60.525 63.158 4.53 0.00 45.77 4.85
9099 14620 1.609783 GATGTGGGCCTAAGCAGGT 59.390 57.895 4.53 0.00 44.68 4.00
9100 14621 0.464554 GATGTGGGCCTAAGCAGGTC 60.465 60.000 4.53 0.00 46.74 3.85
9105 14626 3.957288 GGCCTAAGCAGGTCAAGAA 57.043 52.632 0.00 0.00 46.69 2.52
9106 14627 2.200373 GGCCTAAGCAGGTCAAGAAA 57.800 50.000 0.00 0.00 46.69 2.52
9107 14628 1.813178 GGCCTAAGCAGGTCAAGAAAC 59.187 52.381 0.00 0.00 46.69 2.78
9108 14629 2.553247 GGCCTAAGCAGGTCAAGAAACT 60.553 50.000 0.00 0.00 46.69 2.66
9109 14630 3.149981 GCCTAAGCAGGTCAAGAAACTT 58.850 45.455 0.00 0.00 44.68 2.66
9110 14631 3.057946 GCCTAAGCAGGTCAAGAAACTTG 60.058 47.826 5.29 5.29 44.68 3.16
9111 14632 4.389374 CCTAAGCAGGTCAAGAAACTTGA 58.611 43.478 9.67 9.67 37.15 3.02
9112 14633 4.214332 CCTAAGCAGGTCAAGAAACTTGAC 59.786 45.833 26.42 26.42 45.89 3.18
9118 14639 3.604065 GTCAAGAAACTTGACCGTTCC 57.396 47.619 24.96 7.33 42.07 3.62
9119 14640 3.203716 GTCAAGAAACTTGACCGTTCCT 58.796 45.455 24.96 0.00 42.07 3.36
9120 14641 3.002348 GTCAAGAAACTTGACCGTTCCTG 59.998 47.826 24.96 0.00 42.07 3.86
9121 14642 2.256117 AGAAACTTGACCGTTCCTGG 57.744 50.000 0.00 0.00 0.00 4.45
9122 14643 0.591659 GAAACTTGACCGTTCCTGGC 59.408 55.000 0.00 0.00 0.00 4.85
9123 14644 0.106918 AAACTTGACCGTTCCTGGCA 60.107 50.000 0.00 0.00 0.00 4.92
9124 14645 0.818040 AACTTGACCGTTCCTGGCAC 60.818 55.000 0.00 0.00 0.00 5.01
9125 14646 2.280524 TTGACCGTTCCTGGCACG 60.281 61.111 12.01 12.01 37.39 5.34
9145 14666 2.734723 CGTCCACACGGTGAGCTG 60.735 66.667 16.29 2.53 42.73 4.24
9146 14667 3.044305 GTCCACACGGTGAGCTGC 61.044 66.667 16.29 0.00 35.23 5.25
9147 14668 3.545574 TCCACACGGTGAGCTGCA 61.546 61.111 16.29 0.00 35.23 4.41
9148 14669 2.359107 CCACACGGTGAGCTGCAT 60.359 61.111 16.29 0.00 35.23 3.96
9149 14670 2.683859 CCACACGGTGAGCTGCATG 61.684 63.158 16.29 0.20 35.23 4.06
9150 14671 3.052082 ACACGGTGAGCTGCATGC 61.052 61.111 16.29 11.82 43.29 4.06
9151 14672 3.807538 CACGGTGAGCTGCATGCC 61.808 66.667 16.68 0.00 44.23 4.40
9152 14673 4.334118 ACGGTGAGCTGCATGCCA 62.334 61.111 16.68 2.24 44.23 4.92
9153 14674 3.057548 CGGTGAGCTGCATGCCAA 61.058 61.111 16.68 0.00 44.23 4.52
9154 14675 2.882876 GGTGAGCTGCATGCCAAG 59.117 61.111 16.68 8.05 44.23 3.61
9155 14676 1.676635 GGTGAGCTGCATGCCAAGA 60.677 57.895 16.68 0.00 44.23 3.02
9156 14677 1.035932 GGTGAGCTGCATGCCAAGAT 61.036 55.000 16.68 5.17 44.23 2.40
9157 14678 0.100682 GTGAGCTGCATGCCAAGATG 59.899 55.000 16.68 0.00 44.23 2.90
9164 14685 1.852942 GCATGCCAAGATGCTCATTG 58.147 50.000 6.36 0.00 44.57 2.82
9165 14686 1.407618 GCATGCCAAGATGCTCATTGA 59.592 47.619 6.36 0.00 44.57 2.57
9166 14687 2.159156 GCATGCCAAGATGCTCATTGAA 60.159 45.455 6.36 0.00 44.57 2.69
9167 14688 3.677700 GCATGCCAAGATGCTCATTGAAA 60.678 43.478 6.36 0.00 44.57 2.69
9168 14689 3.581024 TGCCAAGATGCTCATTGAAAC 57.419 42.857 0.00 0.00 0.00 2.78
9169 14690 2.892215 TGCCAAGATGCTCATTGAAACA 59.108 40.909 0.00 0.00 0.00 2.83
9170 14691 3.248266 GCCAAGATGCTCATTGAAACAC 58.752 45.455 0.00 0.00 0.00 3.32
9171 14692 3.057033 GCCAAGATGCTCATTGAAACACT 60.057 43.478 0.00 0.00 0.00 3.55
9172 14693 4.482386 CCAAGATGCTCATTGAAACACTG 58.518 43.478 0.00 0.00 0.00 3.66
9173 14694 3.844577 AGATGCTCATTGAAACACTGC 57.155 42.857 0.00 0.00 0.00 4.40
9174 14695 3.418995 AGATGCTCATTGAAACACTGCT 58.581 40.909 0.00 0.00 0.00 4.24
9175 14696 3.825014 AGATGCTCATTGAAACACTGCTT 59.175 39.130 0.00 0.00 0.00 3.91
9176 14697 4.280174 AGATGCTCATTGAAACACTGCTTT 59.720 37.500 0.00 0.00 0.00 3.51
9177 14698 4.389890 TGCTCATTGAAACACTGCTTTT 57.610 36.364 0.00 0.00 0.00 2.27
9178 14699 4.757594 TGCTCATTGAAACACTGCTTTTT 58.242 34.783 0.00 0.00 0.00 1.94
9179 14700 5.900425 TGCTCATTGAAACACTGCTTTTTA 58.100 33.333 0.00 0.00 0.00 1.52
9180 14701 6.514947 TGCTCATTGAAACACTGCTTTTTAT 58.485 32.000 0.00 0.00 0.00 1.40
9181 14702 6.421501 TGCTCATTGAAACACTGCTTTTTATG 59.578 34.615 0.00 0.00 0.00 1.90
9182 14703 6.421801 GCTCATTGAAACACTGCTTTTTATGT 59.578 34.615 0.00 0.00 0.00 2.29
9183 14704 7.358683 GCTCATTGAAACACTGCTTTTTATGTC 60.359 37.037 0.00 0.00 0.00 3.06
9184 14705 6.922957 TCATTGAAACACTGCTTTTTATGTCC 59.077 34.615 0.00 0.00 0.00 4.02
9185 14706 5.843673 TGAAACACTGCTTTTTATGTCCA 57.156 34.783 0.00 0.00 0.00 4.02
9186 14707 5.830912 TGAAACACTGCTTTTTATGTCCAG 58.169 37.500 0.00 0.00 0.00 3.86
9187 14708 4.853924 AACACTGCTTTTTATGTCCAGG 57.146 40.909 0.00 0.00 0.00 4.45
9188 14709 3.157087 ACACTGCTTTTTATGTCCAGGG 58.843 45.455 0.00 0.00 33.32 4.45
9189 14710 3.157087 CACTGCTTTTTATGTCCAGGGT 58.843 45.455 0.00 0.00 0.00 4.34
9190 14711 3.057315 CACTGCTTTTTATGTCCAGGGTG 60.057 47.826 0.00 0.00 0.00 4.61
9191 14712 2.493278 CTGCTTTTTATGTCCAGGGTGG 59.507 50.000 0.00 0.00 39.43 4.61
9192 14713 2.109128 TGCTTTTTATGTCCAGGGTGGA 59.891 45.455 0.00 0.00 45.98 4.02
9200 14721 3.819245 TCCAGGGTGGAAACTGTTG 57.181 52.632 0.00 0.00 45.00 3.33
9201 14722 0.923358 TCCAGGGTGGAAACTGTTGT 59.077 50.000 0.00 0.00 45.00 3.32
9202 14723 1.133915 TCCAGGGTGGAAACTGTTGTC 60.134 52.381 0.00 0.00 45.00 3.18
9203 14724 1.133792 CCAGGGTGGAAACTGTTGTCT 60.134 52.381 0.00 0.00 40.96 3.41
9204 14725 2.654863 CAGGGTGGAAACTGTTGTCTT 58.345 47.619 0.00 0.00 0.00 3.01
9205 14726 2.358898 CAGGGTGGAAACTGTTGTCTTG 59.641 50.000 0.00 0.00 0.00 3.02
9206 14727 1.681264 GGGTGGAAACTGTTGTCTTGG 59.319 52.381 0.00 0.00 0.00 3.61
9207 14728 1.067060 GGTGGAAACTGTTGTCTTGGC 59.933 52.381 0.00 0.00 0.00 4.52
9208 14729 1.067060 GTGGAAACTGTTGTCTTGGCC 59.933 52.381 0.00 0.00 0.00 5.36
9209 14730 1.064017 TGGAAACTGTTGTCTTGGCCT 60.064 47.619 3.32 0.00 0.00 5.19
9210 14731 1.609072 GGAAACTGTTGTCTTGGCCTC 59.391 52.381 3.32 0.00 0.00 4.70
9211 14732 2.576615 GAAACTGTTGTCTTGGCCTCT 58.423 47.619 3.32 0.00 0.00 3.69
9212 14733 2.736670 AACTGTTGTCTTGGCCTCTT 57.263 45.000 3.32 0.00 0.00 2.85
9213 14734 2.736670 ACTGTTGTCTTGGCCTCTTT 57.263 45.000 3.32 0.00 0.00 2.52
9214 14735 2.301346 ACTGTTGTCTTGGCCTCTTTG 58.699 47.619 3.32 0.00 0.00 2.77
9215 14736 2.092429 ACTGTTGTCTTGGCCTCTTTGA 60.092 45.455 3.32 0.00 0.00 2.69
9216 14737 3.152341 CTGTTGTCTTGGCCTCTTTGAT 58.848 45.455 3.32 0.00 0.00 2.57
9217 14738 3.149196 TGTTGTCTTGGCCTCTTTGATC 58.851 45.455 3.32 0.00 0.00 2.92
9218 14739 2.099141 TGTCTTGGCCTCTTTGATCG 57.901 50.000 3.32 0.00 0.00 3.69
9219 14740 1.623311 TGTCTTGGCCTCTTTGATCGA 59.377 47.619 3.32 0.00 0.00 3.59
9220 14741 2.038426 TGTCTTGGCCTCTTTGATCGAA 59.962 45.455 3.32 0.00 0.00 3.71
9221 14742 2.416893 GTCTTGGCCTCTTTGATCGAAC 59.583 50.000 3.32 0.00 0.00 3.95
9222 14743 2.303022 TCTTGGCCTCTTTGATCGAACT 59.697 45.455 3.32 0.00 0.00 3.01
9223 14744 2.859165 TGGCCTCTTTGATCGAACTT 57.141 45.000 3.32 0.00 0.00 2.66
9224 14745 3.973206 TGGCCTCTTTGATCGAACTTA 57.027 42.857 3.32 0.00 0.00 2.24
9225 14746 3.861840 TGGCCTCTTTGATCGAACTTAG 58.138 45.455 3.32 0.00 0.00 2.18
9226 14747 3.513912 TGGCCTCTTTGATCGAACTTAGA 59.486 43.478 3.32 0.00 0.00 2.10
9227 14748 3.866327 GGCCTCTTTGATCGAACTTAGAC 59.134 47.826 0.00 0.00 0.00 2.59
9228 14749 3.866327 GCCTCTTTGATCGAACTTAGACC 59.134 47.826 0.00 0.00 0.00 3.85
9229 14750 4.382147 GCCTCTTTGATCGAACTTAGACCT 60.382 45.833 0.00 0.00 0.00 3.85
9230 14751 5.725362 CCTCTTTGATCGAACTTAGACCTT 58.275 41.667 0.00 0.00 0.00 3.50
9231 14752 5.578727 CCTCTTTGATCGAACTTAGACCTTG 59.421 44.000 0.00 0.00 0.00 3.61
9232 14753 6.097915 TCTTTGATCGAACTTAGACCTTGT 57.902 37.500 0.00 0.00 0.00 3.16
9233 14754 5.926542 TCTTTGATCGAACTTAGACCTTGTG 59.073 40.000 0.00 0.00 0.00 3.33
9234 14755 4.866508 TGATCGAACTTAGACCTTGTGT 57.133 40.909 0.00 0.00 0.00 3.72
9235 14756 5.209818 TGATCGAACTTAGACCTTGTGTT 57.790 39.130 0.00 0.00 0.00 3.32
9236 14757 4.988540 TGATCGAACTTAGACCTTGTGTTG 59.011 41.667 0.00 0.00 0.00 3.33
9237 14758 4.395959 TCGAACTTAGACCTTGTGTTGT 57.604 40.909 0.00 0.00 0.00 3.32
9238 14759 4.761975 TCGAACTTAGACCTTGTGTTGTT 58.238 39.130 0.00 0.00 0.00 2.83
9239 14760 5.904941 TCGAACTTAGACCTTGTGTTGTTA 58.095 37.500 0.00 0.00 0.00 2.41
9240 14761 5.750067 TCGAACTTAGACCTTGTGTTGTTAC 59.250 40.000 0.00 0.00 0.00 2.50
9241 14762 5.050567 CGAACTTAGACCTTGTGTTGTTACC 60.051 44.000 0.00 0.00 0.00 2.85
9242 14763 5.625568 ACTTAGACCTTGTGTTGTTACCT 57.374 39.130 0.00 0.00 0.00 3.08
9243 14764 5.997843 ACTTAGACCTTGTGTTGTTACCTT 58.002 37.500 0.00 0.00 0.00 3.50
9244 14765 7.128234 ACTTAGACCTTGTGTTGTTACCTTA 57.872 36.000 0.00 0.00 0.00 2.69
9245 14766 7.742767 ACTTAGACCTTGTGTTGTTACCTTAT 58.257 34.615 0.00 0.00 0.00 1.73
9246 14767 8.215736 ACTTAGACCTTGTGTTGTTACCTTATT 58.784 33.333 0.00 0.00 0.00 1.40
9247 14768 6.877611 AGACCTTGTGTTGTTACCTTATTG 57.122 37.500 0.00 0.00 0.00 1.90
9248 14769 6.597562 AGACCTTGTGTTGTTACCTTATTGA 58.402 36.000 0.00 0.00 0.00 2.57
9249 14770 7.057894 AGACCTTGTGTTGTTACCTTATTGAA 58.942 34.615 0.00 0.00 0.00 2.69
9250 14771 7.724061 AGACCTTGTGTTGTTACCTTATTGAAT 59.276 33.333 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
614 631 5.950544 AGTCAAGGCAATACACAGGTATA 57.049 39.130 0.00 0.00 39.28 1.47
1086 1737 7.607250 ACAAAAAGTGAATACAGAACAACCAA 58.393 30.769 0.00 0.00 0.00 3.67
1087 1738 7.164230 ACAAAAAGTGAATACAGAACAACCA 57.836 32.000 0.00 0.00 0.00 3.67
1169 1829 7.258441 TCGGATTATTGTCTCTGTTCTTGTAG 58.742 38.462 0.00 0.00 0.00 2.74
1187 1908 2.225142 CCCCTCTCCAGATCTCGGATTA 60.225 54.545 12.50 5.70 0.00 1.75
1560 2304 2.178984 ACACCTTTCCCCTCCAAAATGA 59.821 45.455 0.00 0.00 0.00 2.57
1876 2659 3.650942 TCCTATTGGGCCGAATACAATCT 59.349 43.478 15.54 0.00 36.36 2.40
1898 2682 1.543429 CCTTTCTCCCTCGCACAAAGT 60.543 52.381 0.00 0.00 0.00 2.66
1908 2692 2.363172 GCGAGGCTCCTTTCTCCCT 61.363 63.158 9.32 0.00 0.00 4.20
2005 2793 2.612972 GCCTGGAACTCATTCGACTGAA 60.613 50.000 6.92 0.00 38.76 3.02
2036 2824 2.548067 CCCGGCAGCTACCTACTATTTG 60.548 54.545 0.42 0.00 0.00 2.32
2040 2828 0.178998 CTCCCGGCAGCTACCTACTA 60.179 60.000 0.42 0.00 0.00 1.82
2041 2829 1.455959 CTCCCGGCAGCTACCTACT 60.456 63.158 0.42 0.00 0.00 2.57
2042 2830 3.130227 CTCCCGGCAGCTACCTAC 58.870 66.667 0.42 0.00 0.00 3.18
2043 2831 2.838225 GCTCCCGGCAGCTACCTA 60.838 66.667 11.09 0.00 41.35 3.08
2057 2845 7.659652 AACTAGACAATTCAGTAAGTTGCTC 57.340 36.000 0.00 0.00 30.82 4.26
2083 2871 4.684242 GGCCAATTAAGTTTTTCTTCGGTG 59.316 41.667 0.00 0.00 37.56 4.94
2161 2963 2.837371 AAAGCCTGTCGTAGAGCCGC 62.837 60.000 0.00 0.00 36.95 6.53
2162 2964 1.078759 CAAAGCCTGTCGTAGAGCCG 61.079 60.000 0.00 0.00 36.95 5.52
2163 2965 1.362406 GCAAAGCCTGTCGTAGAGCC 61.362 60.000 0.00 0.00 36.95 4.70
2164 2966 0.390472 AGCAAAGCCTGTCGTAGAGC 60.390 55.000 0.00 0.00 36.95 4.09
2165 2967 1.996191 GAAGCAAAGCCTGTCGTAGAG 59.004 52.381 0.00 0.00 36.95 2.43
2166 2968 1.343142 TGAAGCAAAGCCTGTCGTAGA 59.657 47.619 0.00 0.00 0.00 2.59
2167 2969 1.461127 GTGAAGCAAAGCCTGTCGTAG 59.539 52.381 0.00 0.00 0.00 3.51
2168 2970 1.508632 GTGAAGCAAAGCCTGTCGTA 58.491 50.000 0.00 0.00 0.00 3.43
2207 3009 3.328931 ACTGGAGGTTTGATGACTGACAT 59.671 43.478 0.00 0.00 42.47 3.06
2208 3010 2.705658 ACTGGAGGTTTGATGACTGACA 59.294 45.455 0.00 0.00 0.00 3.58
2209 3011 3.409026 ACTGGAGGTTTGATGACTGAC 57.591 47.619 0.00 0.00 0.00 3.51
2210 3012 4.021104 CACTACTGGAGGTTTGATGACTGA 60.021 45.833 0.00 0.00 0.00 3.41
2211 3013 4.248859 CACTACTGGAGGTTTGATGACTG 58.751 47.826 0.00 0.00 0.00 3.51
2212 3014 3.904339 ACACTACTGGAGGTTTGATGACT 59.096 43.478 0.00 0.00 0.00 3.41
2213 3015 4.273148 ACACTACTGGAGGTTTGATGAC 57.727 45.455 0.00 0.00 0.00 3.06
2214 3016 4.593206 AGAACACTACTGGAGGTTTGATGA 59.407 41.667 0.00 0.00 0.00 2.92
2215 3017 4.899502 AGAACACTACTGGAGGTTTGATG 58.100 43.478 0.00 0.00 0.00 3.07
2216 3018 5.308825 CAAGAACACTACTGGAGGTTTGAT 58.691 41.667 0.00 0.00 0.00 2.57
2226 3028 4.695455 CACCATAACCCAAGAACACTACTG 59.305 45.833 0.00 0.00 0.00 2.74
2244 3046 2.504367 GTGTGCAAGAACTACCACCAT 58.496 47.619 0.00 0.00 0.00 3.55
2265 3067 2.893398 CAGCCCGTGGTCTACCTC 59.107 66.667 0.02 0.00 36.82 3.85
2298 3158 2.760634 TATTGTGCGTGGTCATGACT 57.239 45.000 24.50 4.83 0.00 3.41
2300 3160 2.097304 GCAATATTGTGCGTGGTCATGA 59.903 45.455 16.61 0.00 34.21 3.07
2316 3176 2.212652 GTGGCGATGATGACAGCAATA 58.787 47.619 0.00 0.00 32.22 1.90
2318 3178 1.026182 GGTGGCGATGATGACAGCAA 61.026 55.000 0.00 0.00 44.76 3.91
2324 3184 2.202919 CTGCGGTGGCGATGATGA 60.203 61.111 0.00 0.00 44.10 2.92
2329 3189 3.737172 GTTTGCTGCGGTGGCGAT 61.737 61.111 0.00 0.00 44.10 4.58
2330 3190 4.927782 AGTTTGCTGCGGTGGCGA 62.928 61.111 0.00 0.00 44.10 5.54
2331 3191 4.688419 CAGTTTGCTGCGGTGGCG 62.688 66.667 0.00 0.00 44.10 5.69
2370 3230 2.994995 ATGACGGTGGAGGACGCA 60.995 61.111 0.00 0.00 0.00 5.24
2387 3247 2.682136 TGATGGCCTTCCCGACGA 60.682 61.111 15.62 0.00 35.87 4.20
2592 5550 4.801624 CTGCCGCTGCGACTGCTA 62.802 66.667 25.45 8.38 43.34 3.49
3114 6097 1.027255 CAACCACAACCACCGTCACA 61.027 55.000 0.00 0.00 0.00 3.58
3140 6129 2.185350 CAACGCTCCATCTCGCCT 59.815 61.111 0.00 0.00 0.00 5.52
3162 6151 1.590591 TCCCAGGCCTACTAATTGCA 58.409 50.000 3.98 0.00 0.00 4.08
3193 6182 1.414158 TCATTCCCCATCGTCCTCTC 58.586 55.000 0.00 0.00 0.00 3.20
3298 6303 4.039004 ACGATAGACTAGCTAGACGAGGAA 59.961 45.833 27.45 7.56 36.78 3.36
3365 6382 3.716195 CCTCCCATGTGCCCGTGA 61.716 66.667 0.00 0.00 0.00 4.35
3368 6385 4.181010 CTCCCTCCCATGTGCCCG 62.181 72.222 0.00 0.00 0.00 6.13
3454 6488 2.086869 GAGCTGTGTGCACACCATTAT 58.913 47.619 39.34 24.00 45.88 1.28
3467 6501 1.126890 CATGCTACGATCGAGCTGTG 58.873 55.000 27.65 23.20 40.76 3.66
3527 7800 8.338072 ACCAGTGTATATGCTACTAGTACATC 57.662 38.462 16.36 7.79 0.00 3.06
3528 7801 7.119407 CGACCAGTGTATATGCTACTAGTACAT 59.881 40.741 16.81 16.81 0.00 2.29
3542 7815 6.432162 ACAGAAACTAACTCGACCAGTGTATA 59.568 38.462 0.00 0.00 34.56 1.47
3666 8227 9.656040 ACAGCATGCAAAATAGATCAATTTTAA 57.344 25.926 21.98 0.00 42.53 1.52
3676 8237 5.963176 TTTCAGACAGCATGCAAAATAGA 57.037 34.783 21.98 7.54 42.53 1.98
3677 8238 6.097356 ACATTTCAGACAGCATGCAAAATAG 58.903 36.000 21.98 5.09 42.53 1.73
3679 8240 4.890088 ACATTTCAGACAGCATGCAAAAT 58.110 34.783 21.98 11.84 42.53 1.82
3684 8245 3.686241 TGTAGACATTTCAGACAGCATGC 59.314 43.478 10.51 10.51 42.53 4.06
3689 8250 5.788450 AGGTCTTGTAGACATTTCAGACAG 58.212 41.667 12.12 0.00 46.79 3.51
3702 8263 8.705594 TCCCTTCATTTCTATAAGGTCTTGTAG 58.294 37.037 7.81 7.81 38.49 2.74
3725 8286 7.234577 TGGCCATGGTCTTAAAATAATAATCCC 59.765 37.037 19.09 1.59 0.00 3.85
3729 8294 6.897966 TGGTGGCCATGGTCTTAAAATAATAA 59.102 34.615 19.09 0.00 0.00 1.40
3739 8304 1.187567 GCTTTGGTGGCCATGGTCTT 61.188 55.000 19.09 0.00 31.53 3.01
3766 8335 0.383590 CATGTCGCCATCGTCTCTCT 59.616 55.000 0.00 0.00 36.96 3.10
3824 8393 0.537188 TCAAGATGGCGAGAAGGTCC 59.463 55.000 0.00 0.00 0.00 4.46
3880 8449 2.203126 CATTCCCGGCTCCTGCTC 60.203 66.667 0.00 0.00 39.59 4.26
3881 8450 3.801997 CCATTCCCGGCTCCTGCT 61.802 66.667 0.00 0.00 39.59 4.24
3882 8451 3.764160 CTCCATTCCCGGCTCCTGC 62.764 68.421 0.00 0.00 38.76 4.85
3883 8452 2.037620 CTCTCCATTCCCGGCTCCTG 62.038 65.000 0.00 0.00 0.00 3.86
3886 8455 1.745264 CTCTCTCCATTCCCGGCTC 59.255 63.158 0.00 0.00 0.00 4.70
3935 8522 4.191544 TCCTCAATCATTAACCGCTTCTG 58.808 43.478 0.00 0.00 0.00 3.02
3936 8523 4.446371 CTCCTCAATCATTAACCGCTTCT 58.554 43.478 0.00 0.00 0.00 2.85
3937 8524 3.002759 GCTCCTCAATCATTAACCGCTTC 59.997 47.826 0.00 0.00 0.00 3.86
3938 8525 2.945668 GCTCCTCAATCATTAACCGCTT 59.054 45.455 0.00 0.00 0.00 4.68
3939 8526 2.565841 GCTCCTCAATCATTAACCGCT 58.434 47.619 0.00 0.00 0.00 5.52
3940 8527 1.604278 GGCTCCTCAATCATTAACCGC 59.396 52.381 0.00 0.00 0.00 5.68
3941 8528 1.867233 CGGCTCCTCAATCATTAACCG 59.133 52.381 0.00 0.00 0.00 4.44
3942 8529 2.919228 ACGGCTCCTCAATCATTAACC 58.081 47.619 0.00 0.00 0.00 2.85
3943 8530 3.489785 CGTACGGCTCCTCAATCATTAAC 59.510 47.826 7.57 0.00 0.00 2.01
3944 8531 3.131577 ACGTACGGCTCCTCAATCATTAA 59.868 43.478 21.06 0.00 0.00 1.40
3978 8565 1.067416 TGTATCGATGCGTGCTCCC 59.933 57.895 8.54 0.00 0.00 4.30
3986 8573 3.182572 GTCCGAGATTTGTGTATCGATGC 59.817 47.826 8.54 7.48 34.98 3.91
3987 8574 3.736252 GGTCCGAGATTTGTGTATCGATG 59.264 47.826 8.54 0.00 34.98 3.84
3988 8575 3.550233 CGGTCCGAGATTTGTGTATCGAT 60.550 47.826 4.91 2.16 34.98 3.59
4023 8610 2.270352 TGTCTGGTTGCGATCCTTTT 57.730 45.000 0.00 0.00 0.00 2.27
4024 8611 2.489329 CAATGTCTGGTTGCGATCCTTT 59.511 45.455 0.00 0.00 0.00 3.11
4025 8612 2.086869 CAATGTCTGGTTGCGATCCTT 58.913 47.619 0.00 0.00 0.00 3.36
4026 8613 1.679944 CCAATGTCTGGTTGCGATCCT 60.680 52.381 0.00 0.00 40.78 3.24
4027 8614 0.734889 CCAATGTCTGGTTGCGATCC 59.265 55.000 0.00 0.00 40.78 3.36
4036 8623 0.523072 CGGACAAAGCCAATGTCTGG 59.477 55.000 12.74 4.20 45.99 3.86
4038 8625 0.110486 ACCGGACAAAGCCAATGTCT 59.890 50.000 9.46 0.00 45.13 3.41
4042 8629 1.613437 CAGAAACCGGACAAAGCCAAT 59.387 47.619 9.46 0.00 0.00 3.16
4044 8631 0.106918 ACAGAAACCGGACAAAGCCA 60.107 50.000 9.46 0.00 0.00 4.75
4084 8671 3.570926 TCGTAAACTGACGCTCATCTT 57.429 42.857 0.00 0.00 42.62 2.40
4096 8683 1.153429 GGGCTGGCGATCGTAAACT 60.153 57.895 17.81 0.00 0.00 2.66
4251 8840 6.270815 GGACTTGTGTTTCCCTTTTTAGTTC 58.729 40.000 0.00 0.00 0.00 3.01
4360 8949 0.901827 TTATGAAGAGGACTGCGGCA 59.098 50.000 1.29 1.29 0.00 5.69
4415 9004 4.278513 CCACCCGCCCACCTTTGA 62.279 66.667 0.00 0.00 0.00 2.69
4623 9216 3.363844 GAGCCAGAGGACGTGGAGC 62.364 68.421 0.00 0.00 37.23 4.70
4670 9263 2.276472 CAACGGGTATTGTTGCATGG 57.724 50.000 0.00 0.00 40.11 3.66
4783 9376 1.526575 CGCCACCTTCACAGCCAATT 61.527 55.000 0.00 0.00 0.00 2.32
4822 9415 1.443872 GCACTCTCGTACACCCACG 60.444 63.158 0.00 0.00 43.28 4.94
4828 9421 0.318360 CACGGTTGCACTCTCGTACA 60.318 55.000 0.00 0.00 34.31 2.90
4857 9450 3.134127 GGTGCCAATCCCTGTCGC 61.134 66.667 0.00 0.00 0.00 5.19
4858 9451 1.450312 GAGGTGCCAATCCCTGTCG 60.450 63.158 0.00 0.00 0.00 4.35
4877 9670 2.844839 AGCCTAGATCGGGTGCCC 60.845 66.667 9.02 0.00 32.60 5.36
4919 9712 4.345859 ACCTCTATCGTGGACAAACAAA 57.654 40.909 0.00 0.00 0.00 2.83
4920 9713 5.416083 CATACCTCTATCGTGGACAAACAA 58.584 41.667 0.00 0.00 0.00 2.83
5003 9796 3.294493 ATTTTGCCACACGCCGCT 61.294 55.556 0.00 0.00 36.24 5.52
5004 9797 3.105157 CATTTTGCCACACGCCGC 61.105 61.111 0.00 0.00 36.24 6.53
5042 9835 2.081212 GGCGTCTTCTGTGTCGTCG 61.081 63.158 0.00 0.00 0.00 5.12
5150 9943 2.054140 GACACGCTCGAGCCCTAGAG 62.054 65.000 30.66 17.99 37.91 2.43
5151 9944 2.045242 ACACGCTCGAGCCCTAGA 60.045 61.111 30.66 0.00 37.91 2.43
5152 9945 2.409651 GACACGCTCGAGCCCTAG 59.590 66.667 30.66 19.09 37.91 3.02
5153 9946 3.506096 CGACACGCTCGAGCCCTA 61.506 66.667 30.66 0.00 46.14 3.53
5184 9977 1.381735 CTTTCAATGCCCCTCCCCC 60.382 63.158 0.00 0.00 0.00 5.40
5185 9978 0.396278 CTCTTTCAATGCCCCTCCCC 60.396 60.000 0.00 0.00 0.00 4.81
5186 9979 0.332972 ACTCTTTCAATGCCCCTCCC 59.667 55.000 0.00 0.00 0.00 4.30
5187 9980 1.272147 ACACTCTTTCAATGCCCCTCC 60.272 52.381 0.00 0.00 0.00 4.30
5188 9981 2.087646 GACACTCTTTCAATGCCCCTC 58.912 52.381 0.00 0.00 0.00 4.30
5189 9982 1.611673 CGACACTCTTTCAATGCCCCT 60.612 52.381 0.00 0.00 0.00 4.79
5190 9983 0.804989 CGACACTCTTTCAATGCCCC 59.195 55.000 0.00 0.00 0.00 5.80
5191 9984 1.808411 TCGACACTCTTTCAATGCCC 58.192 50.000 0.00 0.00 0.00 5.36
5192 9985 5.107837 CGTATATCGACACTCTTTCAATGCC 60.108 44.000 0.00 0.00 42.86 4.40
5193 9986 5.107837 CCGTATATCGACACTCTTTCAATGC 60.108 44.000 0.00 0.00 42.86 3.56
5194 9987 5.107837 GCCGTATATCGACACTCTTTCAATG 60.108 44.000 0.00 0.00 42.86 2.82
5195 9988 4.982916 GCCGTATATCGACACTCTTTCAAT 59.017 41.667 0.00 0.00 42.86 2.57
5196 9989 4.097437 AGCCGTATATCGACACTCTTTCAA 59.903 41.667 0.00 0.00 42.86 2.69
5197 9990 3.630769 AGCCGTATATCGACACTCTTTCA 59.369 43.478 0.00 0.00 42.86 2.69
5198 9991 4.226113 AGCCGTATATCGACACTCTTTC 57.774 45.455 0.00 0.00 42.86 2.62
5199 9992 5.061853 TCTAGCCGTATATCGACACTCTTT 58.938 41.667 0.00 0.00 42.86 2.52
5200 9993 4.639334 TCTAGCCGTATATCGACACTCTT 58.361 43.478 0.00 0.00 42.86 2.85
5201 9994 4.247258 CTCTAGCCGTATATCGACACTCT 58.753 47.826 0.00 0.00 42.86 3.24
5202 9995 3.181518 GCTCTAGCCGTATATCGACACTC 60.182 52.174 0.00 0.00 42.86 3.51
5203 9996 2.743126 GCTCTAGCCGTATATCGACACT 59.257 50.000 0.00 0.00 42.86 3.55
5204 9997 2.743126 AGCTCTAGCCGTATATCGACAC 59.257 50.000 0.00 0.00 43.38 3.67
5205 9998 3.055209 AGCTCTAGCCGTATATCGACA 57.945 47.619 0.00 0.00 43.38 4.35
5206 9999 4.159857 CAAAGCTCTAGCCGTATATCGAC 58.840 47.826 0.00 0.00 43.38 4.20
5207 10000 3.190744 CCAAAGCTCTAGCCGTATATCGA 59.809 47.826 0.00 0.00 43.38 3.59
5208 10001 3.190744 TCCAAAGCTCTAGCCGTATATCG 59.809 47.826 0.00 0.00 43.38 2.92
5209 10002 4.785511 TCCAAAGCTCTAGCCGTATATC 57.214 45.455 0.00 0.00 43.38 1.63
5210 10003 4.589374 ACTTCCAAAGCTCTAGCCGTATAT 59.411 41.667 0.00 0.00 43.38 0.86
5211 10004 3.958798 ACTTCCAAAGCTCTAGCCGTATA 59.041 43.478 0.00 0.00 43.38 1.47
5215 10402 1.363744 CACTTCCAAAGCTCTAGCCG 58.636 55.000 0.00 0.00 43.38 5.52
5218 10405 7.201767 CCATTTAATCCACTTCCAAAGCTCTAG 60.202 40.741 0.00 0.00 0.00 2.43
5242 10429 0.890542 GAAGCTGTGTGCATGGACCA 60.891 55.000 15.34 11.07 45.94 4.02
5315 10505 1.010125 CCCATTTAATCCGCACGCG 60.010 57.895 3.53 3.53 39.44 6.01
5322 10512 2.357952 GCGACTGGTTCCCATTTAATCC 59.642 50.000 0.00 0.00 30.82 3.01
5337 10527 2.512286 ATGTCGGCCATGCGACTG 60.512 61.111 21.28 4.67 34.86 3.51
5376 10566 2.417719 CAACGCTTCTACTTTGGCTCT 58.582 47.619 0.00 0.00 0.00 4.09
5377 10567 1.464997 CCAACGCTTCTACTTTGGCTC 59.535 52.381 0.00 0.00 32.89 4.70
5447 10638 7.519032 TTTTAATGGGTTCACCTCAAGTAAG 57.481 36.000 0.00 0.00 41.11 2.34
5487 10678 5.854010 ATAGTCCTTACGCTTCTTGATGA 57.146 39.130 0.00 0.00 0.00 2.92
5495 10686 3.445857 GCGAGAAATAGTCCTTACGCTT 58.554 45.455 0.00 0.00 41.25 4.68
5524 10715 1.066914 CGAGACAAGAAGCAGCACTC 58.933 55.000 0.00 0.00 0.00 3.51
5561 10752 1.408266 CCGGCCCAAAAGCTATAGTGT 60.408 52.381 0.00 0.00 0.00 3.55
5566 10757 2.442087 GGCCGGCCCAAAAGCTAT 60.442 61.111 36.64 0.00 0.00 2.97
5603 10794 6.451064 TTCCACCTTTTTCTTCTCACTTTC 57.549 37.500 0.00 0.00 0.00 2.62
5606 10797 4.645136 GGTTTCCACCTTTTTCTTCTCACT 59.355 41.667 0.00 0.00 40.44 3.41
5608 10799 4.605183 TGGTTTCCACCTTTTTCTTCTCA 58.395 39.130 0.00 0.00 44.61 3.27
5609 10800 4.645136 ACTGGTTTCCACCTTTTTCTTCTC 59.355 41.667 0.00 0.00 44.61 2.87
5648 10839 4.299547 AGTCGCGCTGCAACCTGA 62.300 61.111 5.56 0.00 0.00 3.86
5676 10867 4.469657 ACAAGAACCTGATGTTGGCTTTA 58.530 39.130 0.00 0.00 37.29 1.85
5714 10905 0.731514 TCGCCTAAGTCACTTTCGCG 60.732 55.000 19.67 19.67 39.43 5.87
5746 10937 0.395311 TCTATGAACGCCCGACTCCT 60.395 55.000 0.00 0.00 0.00 3.69
5768 10959 4.530857 CTCATCCCCACCCGCGAC 62.531 72.222 8.23 0.00 0.00 5.19
5771 10962 2.046285 CAAACTCATCCCCACCCGC 61.046 63.158 0.00 0.00 0.00 6.13
5778 10969 0.623723 TAGGTGCCCAAACTCATCCC 59.376 55.000 0.00 0.00 0.00 3.85
5779 10970 2.507407 TTAGGTGCCCAAACTCATCC 57.493 50.000 0.00 0.00 0.00 3.51
5846 11037 7.201875 CCCCTAAGAAAAGAAAGTTACAAAGCA 60.202 37.037 0.00 0.00 0.00 3.91
5847 11038 7.013942 TCCCCTAAGAAAAGAAAGTTACAAAGC 59.986 37.037 0.00 0.00 0.00 3.51
5852 11043 8.461249 AAGTTCCCCTAAGAAAAGAAAGTTAC 57.539 34.615 0.00 0.00 0.00 2.50
5887 11078 7.706607 GCCAAACTTGTTTTGTTTCTTCTCTAT 59.293 33.333 0.00 0.00 42.86 1.98
5987 11184 1.673337 GTGGCCGTCCAGGTAAACC 60.673 63.158 0.00 0.00 44.48 3.27
6039 11237 4.819761 GTGAGCCTCGCATGCGGA 62.820 66.667 37.18 23.12 40.25 5.54
6356 11563 4.336433 TGGAAAAGGAAATCAGATCGATGC 59.664 41.667 0.54 0.00 33.40 3.91
6414 11621 1.329906 CATGCAAGAACCTGCTCGATC 59.670 52.381 0.00 0.00 43.07 3.69
6907 12133 4.630069 CCGTTTCATAGATCGGTTTTCACT 59.370 41.667 0.00 0.00 38.45 3.41
6943 12174 4.455877 GCAGAACACAAGGCAGTAGTAATT 59.544 41.667 0.00 0.00 0.00 1.40
6945 12176 3.071023 AGCAGAACACAAGGCAGTAGTAA 59.929 43.478 0.00 0.00 0.00 2.24
6951 12183 0.873054 CTGAGCAGAACACAAGGCAG 59.127 55.000 0.00 0.00 0.00 4.85
6966 12198 2.381725 TCACAAGATCAGCAGCTGAG 57.618 50.000 28.60 17.84 44.08 3.35
7137 12369 2.028930 ACGAGACCTGTTGATGAAGGAC 60.029 50.000 0.00 0.00 37.01 3.85
7178 12420 2.225017 GGAGAGTAGAGGAGGATGAGGG 60.225 59.091 0.00 0.00 0.00 4.30
7197 12439 3.281727 AACAAAGCACACAGAAGAGGA 57.718 42.857 0.00 0.00 0.00 3.71
7226 12468 5.322754 ACCGGAAAAGATCGATCCTCTATA 58.677 41.667 21.66 0.00 0.00 1.31
7227 12469 4.153411 ACCGGAAAAGATCGATCCTCTAT 58.847 43.478 21.66 4.25 0.00 1.98
7228 12470 3.563223 ACCGGAAAAGATCGATCCTCTA 58.437 45.455 21.66 0.00 0.00 2.43
7229 12471 2.389715 ACCGGAAAAGATCGATCCTCT 58.610 47.619 21.66 6.12 0.00 3.69
7251 12493 7.291885 AGGTAGTAGGGGGTAATTATCTTTCAC 59.708 40.741 0.00 0.00 0.00 3.18
7266 12508 4.892345 GGTCTAGTACAAAGGTAGTAGGGG 59.108 50.000 13.79 0.00 46.61 4.79
7275 12557 1.739371 GCCGCTGGTCTAGTACAAAGG 60.739 57.143 0.00 0.00 0.00 3.11
7286 12568 2.833794 TCATATTACTTGCCGCTGGTC 58.166 47.619 0.00 0.00 0.00 4.02
7289 12571 4.275689 TCCAATTCATATTACTTGCCGCTG 59.724 41.667 0.00 0.00 0.00 5.18
7294 12576 6.064717 ACTCCCTCCAATTCATATTACTTGC 58.935 40.000 0.00 0.00 0.00 4.01
7306 12588 6.438425 TCGTAAAACTAGTACTCCCTCCAATT 59.562 38.462 0.00 0.00 0.00 2.32
7309 12591 4.922206 TCGTAAAACTAGTACTCCCTCCA 58.078 43.478 0.00 0.00 0.00 3.86
7310 12592 4.337836 CCTCGTAAAACTAGTACTCCCTCC 59.662 50.000 0.00 0.00 0.00 4.30
7611 12893 5.703130 CCAGAAGAAAGGTAACAGAAAGAGG 59.297 44.000 0.00 0.00 41.41 3.69
7612 12894 6.203723 CACCAGAAGAAAGGTAACAGAAAGAG 59.796 42.308 0.00 0.00 36.07 2.85
7659 12945 6.131544 AGAAATTAATTGTGCCGGTATGAC 57.868 37.500 1.90 0.00 0.00 3.06
7676 12962 4.074970 ACTCCAATTGACTGCGAGAAATT 58.925 39.130 7.12 0.00 0.00 1.82
7683 12969 1.066573 AGAGGACTCCAATTGACTGCG 60.067 52.381 7.12 0.00 0.00 5.18
7866 13158 1.004745 GGGCAGAAGACCTTGGAATGA 59.995 52.381 0.00 0.00 41.07 2.57
7954 13246 5.472137 ACGGTCTGTTAGCACACATTTAAAT 59.528 36.000 0.00 0.00 0.00 1.40
7976 13268 5.794687 TTTGGATGCAATGTAAGTAGACG 57.205 39.130 0.00 0.00 0.00 4.18
8027 13319 0.863144 TGCTTGGACGCGTTTACTTC 59.137 50.000 15.53 0.00 0.00 3.01
8036 13328 0.593128 ACAGAACAATGCTTGGACGC 59.407 50.000 1.84 0.00 34.12 5.19
8037 13329 2.146342 AGACAGAACAATGCTTGGACG 58.854 47.619 1.84 0.00 34.12 4.79
8136 13428 1.414550 TCACCCACAACATCGACTTCA 59.585 47.619 0.00 0.00 0.00 3.02
8193 13485 4.808414 TGACAGAACCTTCTCATCGAAT 57.192 40.909 0.00 0.00 34.74 3.34
8392 13684 7.259290 GGAAAAGACATATTTCCGATGCTTA 57.741 36.000 2.59 0.00 44.49 3.09
8569 13861 2.358898 CAGAATGGCCTAAATGGTTCCG 59.641 50.000 3.32 0.00 38.35 4.30
8653 13945 9.261035 AGAGCAACATATAACTATAGTAGGCAT 57.739 33.333 5.65 0.69 0.00 4.40
8681 13973 6.235231 AGTTTGAACACCTAAAGTCTGAGA 57.765 37.500 0.00 0.00 0.00 3.27
8751 14046 4.313282 ACCGCTCAAACTTAGGTAGAAAC 58.687 43.478 0.00 0.00 32.76 2.78
8763 14058 3.056607 TGGTACTACCTTACCGCTCAAAC 60.057 47.826 6.79 0.00 44.16 2.93
8771 14066 6.053650 GGAATGAACATGGTACTACCTTACC 58.946 44.000 6.79 0.00 41.89 2.85
8857 14152 5.137403 GCATTGTTGCGTTATATTAGGACG 58.863 41.667 0.00 0.00 39.49 4.79
8890 14411 5.921408 ACGAGAAAGTGATCAGTTACTTCAC 59.079 40.000 16.08 8.65 40.00 3.18
8893 14414 6.334102 AGACGAGAAAGTGATCAGTTACTT 57.666 37.500 16.08 3.39 38.70 2.24
8896 14417 9.121658 ACATATAGACGAGAAAGTGATCAGTTA 57.878 33.333 16.08 0.00 0.00 2.24
8920 14441 4.818642 CAAATGAATGGTGGTGCATTACA 58.181 39.130 0.00 0.00 31.30 2.41
8921 14442 3.618150 GCAAATGAATGGTGGTGCATTAC 59.382 43.478 0.00 0.00 31.30 1.89
8945 14466 9.048446 ACGGTTGGTGTATGTTGTATATTATTC 57.952 33.333 0.00 0.00 0.00 1.75
8946 14467 8.832521 CACGGTTGGTGTATGTTGTATATTATT 58.167 33.333 0.00 0.00 41.89 1.40
8966 14487 0.884704 CTAGCTTGCCACACACGGTT 60.885 55.000 0.00 0.00 30.07 4.44
8999 14520 4.680237 CTCGCCGTGCCAGTTCCA 62.680 66.667 0.00 0.00 0.00 3.53
9014 14535 3.368571 GCCTGGCTTGTGGTGCTC 61.369 66.667 12.43 0.00 0.00 4.26
9033 14554 1.602877 CCGTCGTGTTAGTGTGCGTC 61.603 60.000 0.00 0.00 0.00 5.19
9062 14583 5.453909 CACATCGTCGTGTTTTCATGAAAAA 59.546 36.000 30.07 19.07 45.81 1.94
9063 14584 4.966970 CACATCGTCGTGTTTTCATGAAAA 59.033 37.500 26.01 26.01 45.81 2.29
9064 14585 4.522877 CACATCGTCGTGTTTTCATGAAA 58.477 39.130 16.91 16.91 45.81 2.69
9065 14586 3.059257 CCACATCGTCGTGTTTTCATGAA 60.059 43.478 3.38 3.38 45.81 2.57
9066 14587 2.478514 CCACATCGTCGTGTTTTCATGA 59.521 45.455 0.00 0.00 42.72 3.07
9067 14588 2.412716 CCCACATCGTCGTGTTTTCATG 60.413 50.000 6.30 0.00 34.98 3.07
9068 14589 1.804151 CCCACATCGTCGTGTTTTCAT 59.196 47.619 6.30 0.00 34.98 2.57
9069 14590 1.222300 CCCACATCGTCGTGTTTTCA 58.778 50.000 6.30 0.00 34.98 2.69
9070 14591 0.110373 GCCCACATCGTCGTGTTTTC 60.110 55.000 6.30 0.00 34.98 2.29
9071 14592 1.512156 GGCCCACATCGTCGTGTTTT 61.512 55.000 0.00 0.00 34.98 2.43
9072 14593 1.964373 GGCCCACATCGTCGTGTTT 60.964 57.895 0.00 0.00 34.98 2.83
9073 14594 1.537814 TAGGCCCACATCGTCGTGTT 61.538 55.000 0.00 0.00 34.98 3.32
9074 14595 1.537814 TTAGGCCCACATCGTCGTGT 61.538 55.000 0.00 0.00 34.98 4.49
9075 14596 0.806102 CTTAGGCCCACATCGTCGTG 60.806 60.000 0.00 0.75 36.61 4.35
9076 14597 1.515954 CTTAGGCCCACATCGTCGT 59.484 57.895 0.00 0.00 0.00 4.34
9077 14598 1.883084 GCTTAGGCCCACATCGTCG 60.883 63.158 0.00 0.00 0.00 5.12
9078 14599 0.811616 CTGCTTAGGCCCACATCGTC 60.812 60.000 0.00 0.00 37.74 4.20
9079 14600 1.221840 CTGCTTAGGCCCACATCGT 59.778 57.895 0.00 0.00 37.74 3.73
9080 14601 1.524621 CCTGCTTAGGCCCACATCG 60.525 63.158 0.00 0.00 37.74 3.84
9081 14602 0.464554 GACCTGCTTAGGCCCACATC 60.465 60.000 0.00 0.00 37.74 3.06
9082 14603 1.207488 TGACCTGCTTAGGCCCACAT 61.207 55.000 0.00 0.00 37.74 3.21
9083 14604 1.422977 TTGACCTGCTTAGGCCCACA 61.423 55.000 0.00 0.00 37.74 4.17
9084 14605 0.678048 CTTGACCTGCTTAGGCCCAC 60.678 60.000 0.00 0.00 37.74 4.61
9085 14606 0.840288 TCTTGACCTGCTTAGGCCCA 60.840 55.000 0.00 0.00 37.74 5.36
9086 14607 0.328258 TTCTTGACCTGCTTAGGCCC 59.672 55.000 0.00 0.00 37.74 5.80
9087 14608 1.813178 GTTTCTTGACCTGCTTAGGCC 59.187 52.381 0.00 0.00 37.74 5.19
9088 14609 2.784347 AGTTTCTTGACCTGCTTAGGC 58.216 47.619 0.00 0.00 39.26 3.93
9089 14610 4.214332 GTCAAGTTTCTTGACCTGCTTAGG 59.786 45.833 23.72 0.00 42.07 2.69
9090 14611 5.349824 GTCAAGTTTCTTGACCTGCTTAG 57.650 43.478 23.72 0.00 42.07 2.18
9098 14619 3.002348 CAGGAACGGTCAAGTTTCTTGAC 59.998 47.826 25.22 25.22 45.89 3.18
9099 14620 3.202906 CAGGAACGGTCAAGTTTCTTGA 58.797 45.455 1.31 7.92 37.84 3.02
9100 14621 2.290641 CCAGGAACGGTCAAGTTTCTTG 59.709 50.000 1.31 3.44 37.84 3.02
9101 14622 2.572290 CCAGGAACGGTCAAGTTTCTT 58.428 47.619 1.31 0.00 37.84 2.52
9102 14623 1.814248 GCCAGGAACGGTCAAGTTTCT 60.814 52.381 1.31 0.00 40.41 2.52
9103 14624 0.591659 GCCAGGAACGGTCAAGTTTC 59.408 55.000 1.31 0.00 34.00 2.78
9104 14625 0.106918 TGCCAGGAACGGTCAAGTTT 60.107 50.000 1.31 0.00 34.00 2.66
9105 14626 0.818040 GTGCCAGGAACGGTCAAGTT 60.818 55.000 1.31 0.00 36.99 2.66
9106 14627 1.227853 GTGCCAGGAACGGTCAAGT 60.228 57.895 1.31 0.00 0.00 3.16
9107 14628 2.317609 CGTGCCAGGAACGGTCAAG 61.318 63.158 12.91 0.00 37.39 3.02
9108 14629 2.280524 CGTGCCAGGAACGGTCAA 60.281 61.111 12.91 0.00 37.39 3.18
9128 14649 2.734723 CAGCTCACCGTGTGGACG 60.735 66.667 0.00 0.00 45.67 4.79
9129 14650 3.044305 GCAGCTCACCGTGTGGAC 61.044 66.667 0.00 0.00 39.21 4.02
9130 14651 2.882677 ATGCAGCTCACCGTGTGGA 61.883 57.895 0.00 0.00 39.21 4.02
9131 14652 2.359107 ATGCAGCTCACCGTGTGG 60.359 61.111 0.00 0.00 42.84 4.17
9132 14653 2.865308 CATGCAGCTCACCGTGTG 59.135 61.111 0.00 0.00 34.45 3.82
9133 14654 3.052082 GCATGCAGCTCACCGTGT 61.052 61.111 14.21 0.00 41.15 4.49
9134 14655 3.807538 GGCATGCAGCTCACCGTG 61.808 66.667 21.36 0.00 44.79 4.94
9135 14656 3.848301 TTGGCATGCAGCTCACCGT 62.848 57.895 21.36 0.00 44.79 4.83
9136 14657 3.047718 CTTGGCATGCAGCTCACCG 62.048 63.158 21.36 0.00 44.79 4.94
9137 14658 1.035932 ATCTTGGCATGCAGCTCACC 61.036 55.000 21.36 0.00 44.79 4.02
9138 14659 0.100682 CATCTTGGCATGCAGCTCAC 59.899 55.000 21.36 0.64 44.79 3.51
9139 14660 2.489040 CATCTTGGCATGCAGCTCA 58.511 52.632 21.36 5.00 44.79 4.26
9146 14667 3.793797 TTCAATGAGCATCTTGGCATG 57.206 42.857 0.00 0.00 34.92 4.06
9147 14668 3.512329 TGTTTCAATGAGCATCTTGGCAT 59.488 39.130 0.00 0.00 34.92 4.40
9148 14669 2.892215 TGTTTCAATGAGCATCTTGGCA 59.108 40.909 0.00 0.00 34.92 4.92
9149 14670 3.057033 AGTGTTTCAATGAGCATCTTGGC 60.057 43.478 0.00 0.00 34.92 4.52
9150 14671 4.482386 CAGTGTTTCAATGAGCATCTTGG 58.518 43.478 0.00 0.00 30.53 3.61
9151 14672 3.918591 GCAGTGTTTCAATGAGCATCTTG 59.081 43.478 1.44 0.00 30.53 3.02
9152 14673 3.825014 AGCAGTGTTTCAATGAGCATCTT 59.175 39.130 1.44 0.00 30.53 2.40
9153 14674 3.418995 AGCAGTGTTTCAATGAGCATCT 58.581 40.909 1.44 0.00 30.53 2.90
9154 14675 3.844577 AGCAGTGTTTCAATGAGCATC 57.155 42.857 1.44 0.00 30.53 3.91
9155 14676 4.595762 AAAGCAGTGTTTCAATGAGCAT 57.404 36.364 1.44 0.00 30.53 3.79
9156 14677 4.389890 AAAAGCAGTGTTTCAATGAGCA 57.610 36.364 1.44 0.00 30.53 4.26
9157 14678 6.421801 ACATAAAAAGCAGTGTTTCAATGAGC 59.578 34.615 12.62 0.00 30.53 4.26
9158 14679 7.115378 GGACATAAAAAGCAGTGTTTCAATGAG 59.885 37.037 12.62 0.00 30.53 2.90
9159 14680 6.922957 GGACATAAAAAGCAGTGTTTCAATGA 59.077 34.615 12.62 0.00 30.53 2.57
9160 14681 6.700960 TGGACATAAAAAGCAGTGTTTCAATG 59.299 34.615 0.00 0.79 32.29 2.82
9161 14682 6.815089 TGGACATAAAAAGCAGTGTTTCAAT 58.185 32.000 0.00 0.00 0.00 2.57
9162 14683 6.214191 TGGACATAAAAAGCAGTGTTTCAA 57.786 33.333 0.00 0.00 0.00 2.69
9163 14684 5.221224 CCTGGACATAAAAAGCAGTGTTTCA 60.221 40.000 0.00 0.00 0.00 2.69
9164 14685 5.222631 CCTGGACATAAAAAGCAGTGTTTC 58.777 41.667 0.00 0.00 0.00 2.78
9165 14686 4.039124 CCCTGGACATAAAAAGCAGTGTTT 59.961 41.667 0.00 0.00 0.00 2.83
9166 14687 3.573967 CCCTGGACATAAAAAGCAGTGTT 59.426 43.478 0.00 0.00 0.00 3.32
9167 14688 3.157087 CCCTGGACATAAAAAGCAGTGT 58.843 45.455 0.00 0.00 0.00 3.55
9168 14689 3.057315 CACCCTGGACATAAAAAGCAGTG 60.057 47.826 0.00 0.00 0.00 3.66
9169 14690 3.157087 CACCCTGGACATAAAAAGCAGT 58.843 45.455 0.00 0.00 0.00 4.40
9170 14691 2.493278 CCACCCTGGACATAAAAAGCAG 59.507 50.000 0.00 0.00 40.96 4.24
9171 14692 2.109128 TCCACCCTGGACATAAAAAGCA 59.891 45.455 0.00 0.00 42.67 3.91
9172 14693 2.802719 TCCACCCTGGACATAAAAAGC 58.197 47.619 0.00 0.00 42.67 3.51
9182 14703 0.923358 ACAACAGTTTCCACCCTGGA 59.077 50.000 0.00 0.00 46.61 3.86
9183 14704 1.133792 AGACAACAGTTTCCACCCTGG 60.134 52.381 0.00 0.00 39.43 4.45
9184 14705 2.348411 AGACAACAGTTTCCACCCTG 57.652 50.000 0.00 0.00 34.82 4.45
9185 14706 2.654863 CAAGACAACAGTTTCCACCCT 58.345 47.619 0.00 0.00 0.00 4.34
9186 14707 1.681264 CCAAGACAACAGTTTCCACCC 59.319 52.381 0.00 0.00 0.00 4.61
9187 14708 1.067060 GCCAAGACAACAGTTTCCACC 59.933 52.381 0.00 0.00 0.00 4.61
9188 14709 1.067060 GGCCAAGACAACAGTTTCCAC 59.933 52.381 0.00 0.00 0.00 4.02
9189 14710 1.064017 AGGCCAAGACAACAGTTTCCA 60.064 47.619 5.01 0.00 0.00 3.53
9190 14711 1.609072 GAGGCCAAGACAACAGTTTCC 59.391 52.381 5.01 0.00 0.00 3.13
9191 14712 2.576615 AGAGGCCAAGACAACAGTTTC 58.423 47.619 5.01 0.00 0.00 2.78
9192 14713 2.736670 AGAGGCCAAGACAACAGTTT 57.263 45.000 5.01 0.00 0.00 2.66
9193 14714 2.689983 CAAAGAGGCCAAGACAACAGTT 59.310 45.455 5.01 0.00 0.00 3.16
9194 14715 2.092429 TCAAAGAGGCCAAGACAACAGT 60.092 45.455 5.01 0.00 0.00 3.55
9195 14716 2.575532 TCAAAGAGGCCAAGACAACAG 58.424 47.619 5.01 0.00 0.00 3.16
9196 14717 2.727123 TCAAAGAGGCCAAGACAACA 57.273 45.000 5.01 0.00 0.00 3.33
9197 14718 2.160417 CGATCAAAGAGGCCAAGACAAC 59.840 50.000 5.01 0.00 0.00 3.32
9198 14719 2.038426 TCGATCAAAGAGGCCAAGACAA 59.962 45.455 5.01 0.00 0.00 3.18
9199 14720 1.623311 TCGATCAAAGAGGCCAAGACA 59.377 47.619 5.01 0.00 0.00 3.41
9200 14721 2.386661 TCGATCAAAGAGGCCAAGAC 57.613 50.000 5.01 0.00 0.00 3.01
9201 14722 2.303022 AGTTCGATCAAAGAGGCCAAGA 59.697 45.455 5.01 0.00 0.00 3.02
9202 14723 2.704572 AGTTCGATCAAAGAGGCCAAG 58.295 47.619 5.01 0.00 0.00 3.61
9203 14724 2.859165 AGTTCGATCAAAGAGGCCAA 57.141 45.000 5.01 0.00 0.00 4.52
9204 14725 2.859165 AAGTTCGATCAAAGAGGCCA 57.141 45.000 5.01 0.00 0.00 5.36
9205 14726 3.866327 GTCTAAGTTCGATCAAAGAGGCC 59.134 47.826 0.00 0.00 0.00 5.19
9206 14727 3.866327 GGTCTAAGTTCGATCAAAGAGGC 59.134 47.826 0.00 0.00 0.00 4.70
9207 14728 5.331876 AGGTCTAAGTTCGATCAAAGAGG 57.668 43.478 0.00 0.00 0.00 3.69
9208 14729 6.090088 CACAAGGTCTAAGTTCGATCAAAGAG 59.910 42.308 0.00 0.00 0.00 2.85
9209 14730 5.926542 CACAAGGTCTAAGTTCGATCAAAGA 59.073 40.000 0.00 0.00 0.00 2.52
9210 14731 5.696724 ACACAAGGTCTAAGTTCGATCAAAG 59.303 40.000 0.00 0.00 0.00 2.77
9211 14732 5.607477 ACACAAGGTCTAAGTTCGATCAAA 58.393 37.500 0.00 0.00 0.00 2.69
9212 14733 5.209818 ACACAAGGTCTAAGTTCGATCAA 57.790 39.130 0.00 0.00 0.00 2.57
9213 14734 4.866508 ACACAAGGTCTAAGTTCGATCA 57.133 40.909 0.00 0.00 0.00 2.92
9214 14735 4.989168 ACAACACAAGGTCTAAGTTCGATC 59.011 41.667 0.00 0.00 0.00 3.69
9215 14736 4.957296 ACAACACAAGGTCTAAGTTCGAT 58.043 39.130 0.00 0.00 0.00 3.59
9216 14737 4.395959 ACAACACAAGGTCTAAGTTCGA 57.604 40.909 0.00 0.00 0.00 3.71
9217 14738 5.050567 GGTAACAACACAAGGTCTAAGTTCG 60.051 44.000 0.00 0.00 0.00 3.95
9218 14739 6.053650 AGGTAACAACACAAGGTCTAAGTTC 58.946 40.000 0.00 0.00 41.41 3.01
9219 14740 5.997843 AGGTAACAACACAAGGTCTAAGTT 58.002 37.500 0.00 0.00 41.41 2.66
9220 14741 5.625568 AGGTAACAACACAAGGTCTAAGT 57.374 39.130 0.00 0.00 41.41 2.24
9221 14742 8.504005 CAATAAGGTAACAACACAAGGTCTAAG 58.496 37.037 0.00 0.00 41.41 2.18
9222 14743 8.212312 TCAATAAGGTAACAACACAAGGTCTAA 58.788 33.333 0.00 0.00 41.41 2.10
9223 14744 7.737869 TCAATAAGGTAACAACACAAGGTCTA 58.262 34.615 0.00 0.00 41.41 2.59
9224 14745 6.597562 TCAATAAGGTAACAACACAAGGTCT 58.402 36.000 0.00 0.00 41.41 3.85
9225 14746 6.870971 TCAATAAGGTAACAACACAAGGTC 57.129 37.500 0.00 0.00 41.41 3.85
9226 14747 7.833285 ATTCAATAAGGTAACAACACAAGGT 57.167 32.000 0.00 0.00 41.41 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.