Multiple sequence alignment - TraesCS1D01G083000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G083000 chr1D 100.000 3827 0 0 1 3827 66176830 66180656 0.000000e+00 7068
1 TraesCS1D01G083000 chr1D 95.522 603 21 5 1 602 338028640 338029237 0.000000e+00 959
2 TraesCS1D01G083000 chr1D 95.215 606 24 5 1 606 305625889 305625289 0.000000e+00 953
3 TraesCS1D01G083000 chr1D 86.788 439 50 6 3390 3827 471139771 471140202 2.070000e-132 483
4 TraesCS1D01G083000 chr1A 90.135 2078 142 28 900 2967 64692099 64694123 0.000000e+00 2643
5 TraesCS1D01G083000 chr1A 87.016 439 48 7 3390 3827 565468107 565468537 1.600000e-133 486
6 TraesCS1D01G083000 chr1A 91.322 242 18 3 3061 3302 64694441 64694679 1.030000e-85 327
7 TraesCS1D01G083000 chr1A 91.358 81 7 0 2948 3028 64694364 64694444 1.120000e-20 111
8 TraesCS1D01G083000 chr1B 91.714 1931 104 12 1464 3387 106764691 106766572 0.000000e+00 2628
9 TraesCS1D01G083000 chr1B 93.274 565 26 6 902 1465 106764105 106764658 0.000000e+00 822
10 TraesCS1D01G083000 chr1B 79.130 230 30 6 608 823 106763044 106763269 3.990000e-30 143
11 TraesCS1D01G083000 chr3D 96.154 598 20 3 1 597 431803181 431803776 0.000000e+00 974
12 TraesCS1D01G083000 chr2D 96.147 597 18 4 1 597 456975972 456976563 0.000000e+00 970
13 TraesCS1D01G083000 chr2D 95.812 597 23 2 1 597 157040163 157040757 0.000000e+00 963
14 TraesCS1D01G083000 chr2D 95.805 596 24 1 1 596 287178652 287179246 0.000000e+00 961
15 TraesCS1D01G083000 chr4D 95.980 597 22 2 1 597 322704294 322703700 0.000000e+00 968
16 TraesCS1D01G083000 chr4D 95.812 597 24 1 1 597 87420855 87421450 0.000000e+00 963
17 TraesCS1D01G083000 chr6D 95.812 597 23 2 1 597 422066048 422065454 0.000000e+00 963
18 TraesCS1D01G083000 chr6D 83.916 429 58 7 3398 3823 469522766 469522346 2.140000e-107 399
19 TraesCS1D01G083000 chr6A 89.681 407 35 4 3421 3827 376477757 376477358 2.640000e-141 512
20 TraesCS1D01G083000 chr7A 87.244 439 48 6 3390 3827 273005624 273006055 9.550000e-136 494
21 TraesCS1D01G083000 chr7A 86.788 439 48 8 3390 3827 286153078 286152649 7.440000e-132 481
22 TraesCS1D01G083000 chr5B 84.966 439 58 6 3389 3827 158904368 158903938 4.540000e-119 438
23 TraesCS1D01G083000 chr6B 85.612 417 50 5 3390 3805 691627821 691628228 2.730000e-116 429
24 TraesCS1D01G083000 chr6B 84.475 438 60 6 3390 3827 8817963 8817534 3.530000e-115 425


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G083000 chr1D 66176830 66180656 3826 False 7068.000000 7068 100.000000 1 3827 1 chr1D.!!$F1 3826
1 TraesCS1D01G083000 chr1D 338028640 338029237 597 False 959.000000 959 95.522000 1 602 1 chr1D.!!$F2 601
2 TraesCS1D01G083000 chr1D 305625289 305625889 600 True 953.000000 953 95.215000 1 606 1 chr1D.!!$R1 605
3 TraesCS1D01G083000 chr1A 64692099 64694679 2580 False 1027.000000 2643 90.938333 900 3302 3 chr1A.!!$F2 2402
4 TraesCS1D01G083000 chr1B 106763044 106766572 3528 False 1197.666667 2628 88.039333 608 3387 3 chr1B.!!$F1 2779
5 TraesCS1D01G083000 chr3D 431803181 431803776 595 False 974.000000 974 96.154000 1 597 1 chr3D.!!$F1 596
6 TraesCS1D01G083000 chr2D 456975972 456976563 591 False 970.000000 970 96.147000 1 597 1 chr2D.!!$F3 596
7 TraesCS1D01G083000 chr2D 157040163 157040757 594 False 963.000000 963 95.812000 1 597 1 chr2D.!!$F1 596
8 TraesCS1D01G083000 chr2D 287178652 287179246 594 False 961.000000 961 95.805000 1 596 1 chr2D.!!$F2 595
9 TraesCS1D01G083000 chr4D 322703700 322704294 594 True 968.000000 968 95.980000 1 597 1 chr4D.!!$R1 596
10 TraesCS1D01G083000 chr4D 87420855 87421450 595 False 963.000000 963 95.812000 1 597 1 chr4D.!!$F1 596
11 TraesCS1D01G083000 chr6D 422065454 422066048 594 True 963.000000 963 95.812000 1 597 1 chr6D.!!$R1 596

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
895 1666 0.111832 TGGACGAGTGTGGACTACCT 59.888 55.0 0.00 0.0 37.04 3.08 F
1397 2184 0.030101 GAAGATCCTCTCGGTGAGCG 59.970 60.0 0.00 0.0 41.35 5.03 F
2525 3354 0.034059 CTGCAGGAGTTTGAGACGGT 59.966 55.0 5.57 0.0 0.00 4.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2542 3371 0.387202 CATTTGCAACCGACCACCAA 59.613 50.0 0.0 0.0 0.0 3.67 R
2693 3522 0.904649 TCAGTTCATGCCCAGATCGT 59.095 50.0 0.0 0.0 0.0 3.73 R
3791 4885 0.037419 AATGCGGTGTTTTGATGGGC 60.037 50.0 0.0 0.0 0.0 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 6.235664 GGATCTTGTTACTCTTGGGTGTTTA 58.764 40.000 0.00 0.00 0.00 2.01
251 252 2.429494 TCGCATTGTGTGAGGGCA 59.571 55.556 0.00 0.00 31.05 5.36
289 290 0.991920 CCTAGTGGCTTCTTGGGGAA 59.008 55.000 0.00 0.00 0.00 3.97
303 304 0.967380 GGGGAACATTGTGCCTCCAG 60.967 60.000 13.70 0.00 30.34 3.86
307 308 0.251341 AACATTGTGCCTCCAGACCC 60.251 55.000 0.00 0.00 0.00 4.46
308 309 1.379044 CATTGTGCCTCCAGACCCC 60.379 63.158 0.00 0.00 0.00 4.95
377 378 1.258445 ATCCTCGTCTTCACCGGCTT 61.258 55.000 0.00 0.00 0.00 4.35
378 379 1.004918 CCTCGTCTTCACCGGCTTT 60.005 57.895 0.00 0.00 0.00 3.51
391 392 4.467082 TCACCGGCTTTACTCTTGGTTATA 59.533 41.667 0.00 0.00 0.00 0.98
397 398 6.581542 CGGCTTTACTCTTGGTTATATCGTAG 59.418 42.308 0.00 0.00 0.00 3.51
444 446 3.888323 TGTTGTATCCTTTGCTTGCTTGA 59.112 39.130 0.00 0.00 0.00 3.02
562 565 9.418045 GCTAAAAATTGTTAGTTGCCTATTCAA 57.582 29.630 15.37 0.00 34.20 2.69
626 631 4.640855 AGACGACACGCCACACCG 62.641 66.667 0.00 0.00 0.00 4.94
717 736 4.814294 GCACTACTCGCGTGGGGG 62.814 72.222 13.32 7.16 33.10 5.40
796 815 2.341101 GGCGACACGAGAGGAAGGA 61.341 63.158 0.00 0.00 0.00 3.36
797 816 1.137825 GCGACACGAGAGGAAGGAG 59.862 63.158 0.00 0.00 0.00 3.69
798 817 1.803943 CGACACGAGAGGAAGGAGG 59.196 63.158 0.00 0.00 0.00 4.30
800 819 0.528470 GACACGAGAGGAAGGAGGTG 59.472 60.000 0.00 0.00 0.00 4.00
808 827 2.610859 GAAGGAGGTGGAGGGGCA 60.611 66.667 0.00 0.00 0.00 5.36
812 831 4.741239 GAGGTGGAGGGGCAGGGA 62.741 72.222 0.00 0.00 0.00 4.20
827 1110 4.295199 GGAAGGTGGGGGCGGTTT 62.295 66.667 0.00 0.00 0.00 3.27
833 1116 1.304134 GTGGGGGCGGTTTTCATCT 60.304 57.895 0.00 0.00 0.00 2.90
835 1118 0.923358 TGGGGGCGGTTTTCATCTAT 59.077 50.000 0.00 0.00 0.00 1.98
838 1121 2.422945 GGGGGCGGTTTTCATCTATCTT 60.423 50.000 0.00 0.00 0.00 2.40
839 1122 3.181448 GGGGGCGGTTTTCATCTATCTTA 60.181 47.826 0.00 0.00 0.00 2.10
842 1125 5.221581 GGGGCGGTTTTCATCTATCTTACTA 60.222 44.000 0.00 0.00 0.00 1.82
846 1129 6.979238 GCGGTTTTCATCTATCTTACTACACT 59.021 38.462 0.00 0.00 0.00 3.55
857 1140 9.710818 TCTATCTTACTACACTTATTTCCCACT 57.289 33.333 0.00 0.00 0.00 4.00
861 1144 9.483489 TCTTACTACACTTATTTCCCACTATGA 57.517 33.333 0.00 0.00 0.00 2.15
864 1147 8.319057 ACTACACTTATTTCCCACTATGATCA 57.681 34.615 0.00 0.00 0.00 2.92
865 1148 8.424918 ACTACACTTATTTCCCACTATGATCAG 58.575 37.037 0.09 0.00 0.00 2.90
866 1149 6.058183 ACACTTATTTCCCACTATGATCAGC 58.942 40.000 0.09 0.00 0.00 4.26
873 1644 2.611473 CCCACTATGATCAGCCTAAGCG 60.611 54.545 0.09 0.00 46.67 4.68
876 1647 2.301296 ACTATGATCAGCCTAAGCGCAT 59.699 45.455 11.47 0.00 46.67 4.73
877 1648 1.520494 ATGATCAGCCTAAGCGCATG 58.480 50.000 11.47 0.00 46.67 4.06
879 1650 0.250038 GATCAGCCTAAGCGCATGGA 60.250 55.000 11.47 0.00 46.67 3.41
885 1656 1.148157 CCTAAGCGCATGGACGAGTG 61.148 60.000 11.47 0.00 34.06 3.51
887 1658 0.735978 TAAGCGCATGGACGAGTGTG 60.736 55.000 11.47 0.00 34.06 3.82
890 1661 2.094659 CGCATGGACGAGTGTGGAC 61.095 63.158 0.00 0.00 34.06 4.02
892 1663 0.530744 GCATGGACGAGTGTGGACTA 59.469 55.000 0.00 0.00 30.16 2.59
893 1664 1.736032 GCATGGACGAGTGTGGACTAC 60.736 57.143 0.00 0.00 30.16 2.73
894 1665 1.135083 CATGGACGAGTGTGGACTACC 60.135 57.143 0.00 0.00 30.16 3.18
895 1666 0.111832 TGGACGAGTGTGGACTACCT 59.888 55.000 0.00 0.00 37.04 3.08
898 1669 2.552802 CGAGTGTGGACTACCTCGT 58.447 57.895 16.31 0.00 41.27 4.18
918 1694 0.390866 AGTCAGCAGCAATCGTGGAG 60.391 55.000 0.00 0.00 0.00 3.86
947 1723 3.262420 CTCCTCATTTGTCCACGTAAGG 58.738 50.000 0.00 0.00 46.39 2.69
955 1731 3.897141 TGTCCACGTAAGGAATGCATA 57.103 42.857 0.00 0.00 39.92 3.14
959 1735 1.526887 CACGTAAGGAATGCATAGCCG 59.473 52.381 0.00 0.00 46.39 5.52
967 1744 3.832237 ATGCATAGCCGCTTCCCCG 62.832 63.158 0.00 0.00 0.00 5.73
1036 1813 3.916392 AAGGAGGCGTGACGAAGCG 62.916 63.158 10.10 0.00 0.00 4.68
1061 1838 2.435938 GCGCAGACGGATTTGGGA 60.436 61.111 0.30 0.00 40.57 4.37
1076 1860 2.309504 GGGAGGTGGAGAAAGGGGG 61.310 68.421 0.00 0.00 0.00 5.40
1077 1861 1.229853 GGAGGTGGAGAAAGGGGGA 60.230 63.158 0.00 0.00 0.00 4.81
1078 1862 0.845102 GGAGGTGGAGAAAGGGGGAA 60.845 60.000 0.00 0.00 0.00 3.97
1079 1863 0.328592 GAGGTGGAGAAAGGGGGAAC 59.671 60.000 0.00 0.00 0.00 3.62
1080 1864 1.002502 GGTGGAGAAAGGGGGAACG 60.003 63.158 0.00 0.00 0.00 3.95
1081 1865 1.002502 GTGGAGAAAGGGGGAACGG 60.003 63.158 0.00 0.00 0.00 4.44
1082 1866 2.228480 TGGAGAAAGGGGGAACGGG 61.228 63.158 0.00 0.00 0.00 5.28
1083 1867 2.675371 GAGAAAGGGGGAACGGGG 59.325 66.667 0.00 0.00 0.00 5.73
1195 1979 1.306970 GGTTCCGAGGGAGAGGAGA 59.693 63.158 0.00 0.00 37.88 3.71
1199 1983 2.131067 CCGAGGGAGAGGAGAAGGC 61.131 68.421 0.00 0.00 0.00 4.35
1291 2078 2.023318 CCTCAGGTACTACGAGGCG 58.977 63.158 11.22 0.00 39.95 5.52
1292 2079 1.355916 CTCAGGTACTACGAGGCGC 59.644 63.158 0.00 0.00 36.02 6.53
1293 2080 2.061182 CTCAGGTACTACGAGGCGCC 62.061 65.000 21.89 21.89 36.02 6.53
1397 2184 0.030101 GAAGATCCTCTCGGTGAGCG 59.970 60.000 0.00 0.00 41.35 5.03
1414 2201 3.160748 GCTCTGCCTCCCTCCTCC 61.161 72.222 0.00 0.00 0.00 4.30
1429 2216 1.550524 TCCTCCTCACCTGTCGATTTG 59.449 52.381 0.00 0.00 0.00 2.32
1430 2217 1.363744 CTCCTCACCTGTCGATTTGC 58.636 55.000 0.00 0.00 0.00 3.68
1456 2244 5.084818 TCTGTTCTCCATTTATGCTTCGA 57.915 39.130 0.00 0.00 0.00 3.71
1460 2248 6.554419 TGTTCTCCATTTATGCTTCGAATTG 58.446 36.000 0.00 0.00 0.00 2.32
1465 2253 4.582656 CCATTTATGCTTCGAATTGGGGTA 59.417 41.667 0.00 0.00 0.00 3.69
1466 2254 5.068460 CCATTTATGCTTCGAATTGGGGTAA 59.932 40.000 0.00 0.00 0.00 2.85
1467 2255 6.239289 CCATTTATGCTTCGAATTGGGGTAAT 60.239 38.462 0.00 0.00 0.00 1.89
1468 2256 6.783708 TTTATGCTTCGAATTGGGGTAATT 57.216 33.333 0.00 0.00 41.59 1.40
1469 2257 4.654091 ATGCTTCGAATTGGGGTAATTG 57.346 40.909 0.00 0.00 39.06 2.32
1470 2258 3.426615 TGCTTCGAATTGGGGTAATTGT 58.573 40.909 0.00 0.00 39.06 2.71
1475 2297 5.168647 TCGAATTGGGGTAATTGTAGTGT 57.831 39.130 0.00 0.00 39.06 3.55
1486 2308 7.306953 GGGTAATTGTAGTGTTTTATTGCGAA 58.693 34.615 0.00 0.00 0.00 4.70
1512 2334 1.064060 GTCGCGGAAGGATTTGAATGG 59.936 52.381 6.13 0.00 0.00 3.16
1568 2390 4.657814 AACACTACTCATTTCCCCATGT 57.342 40.909 0.00 0.00 0.00 3.21
1616 2444 6.003950 TCTTCTGTTTCTTGGTAATTCTGGG 58.996 40.000 0.00 0.00 0.00 4.45
1623 2451 5.319043 TCTTGGTAATTCTGGGAAACTGT 57.681 39.130 0.00 0.00 0.00 3.55
1685 2514 2.307392 TGGTGGTAAATTAGCTGGCTGA 59.693 45.455 5.25 0.00 0.00 4.26
1691 2520 4.805719 GGTAAATTAGCTGGCTGATTTTGC 59.194 41.667 23.33 17.65 40.85 3.68
1693 2522 4.540359 AATTAGCTGGCTGATTTTGCAA 57.460 36.364 5.25 0.00 29.59 4.08
1694 2523 3.302365 TTAGCTGGCTGATTTTGCAAC 57.698 42.857 0.00 0.00 0.00 4.17
1708 2537 2.921634 TGCAACGTACTTTTTGTGCA 57.078 40.000 3.31 3.31 0.00 4.57
1825 2654 1.548269 AGGACGAGCTGAAGAAGAAGG 59.452 52.381 0.00 0.00 0.00 3.46
1826 2655 1.546476 GGACGAGCTGAAGAAGAAGGA 59.454 52.381 0.00 0.00 0.00 3.36
1827 2656 2.601804 GACGAGCTGAAGAAGAAGGAC 58.398 52.381 0.00 0.00 0.00 3.85
1828 2657 1.068194 ACGAGCTGAAGAAGAAGGACG 60.068 52.381 0.00 0.00 0.00 4.79
1829 2658 1.200252 CGAGCTGAAGAAGAAGGACGA 59.800 52.381 0.00 0.00 0.00 4.20
1830 2659 2.730715 CGAGCTGAAGAAGAAGGACGAG 60.731 54.545 0.00 0.00 0.00 4.18
1831 2660 1.067213 AGCTGAAGAAGAAGGACGAGC 60.067 52.381 0.00 0.00 0.00 5.03
1832 2661 1.067213 GCTGAAGAAGAAGGACGAGCT 60.067 52.381 0.00 0.00 0.00 4.09
1833 2662 2.605030 CTGAAGAAGAAGGACGAGCTG 58.395 52.381 0.00 0.00 0.00 4.24
1834 2663 2.230025 CTGAAGAAGAAGGACGAGCTGA 59.770 50.000 0.00 0.00 0.00 4.26
1835 2664 2.628178 TGAAGAAGAAGGACGAGCTGAA 59.372 45.455 0.00 0.00 0.00 3.02
1836 2665 3.249917 GAAGAAGAAGGACGAGCTGAAG 58.750 50.000 0.00 0.00 0.00 3.02
1837 2666 2.520069 AGAAGAAGGACGAGCTGAAGA 58.480 47.619 0.00 0.00 0.00 2.87
1838 2667 2.894126 AGAAGAAGGACGAGCTGAAGAA 59.106 45.455 0.00 0.00 0.00 2.52
1839 2668 3.056891 AGAAGAAGGACGAGCTGAAGAAG 60.057 47.826 0.00 0.00 0.00 2.85
1840 2669 2.520069 AGAAGGACGAGCTGAAGAAGA 58.480 47.619 0.00 0.00 0.00 2.87
1841 2670 2.894126 AGAAGGACGAGCTGAAGAAGAA 59.106 45.455 0.00 0.00 0.00 2.52
1842 2671 3.056891 AGAAGGACGAGCTGAAGAAGAAG 60.057 47.826 0.00 0.00 0.00 2.85
1863 2692 0.617935 AGAAAGAGGAGAAGGCTGCC 59.382 55.000 11.65 11.65 32.04 4.85
1896 2725 0.673022 AGAAGCAGCAGAAGGAAGCG 60.673 55.000 0.00 0.00 35.48 4.68
1908 2737 1.672356 GGAAGCGAAGAAGGCTGCA 60.672 57.895 0.50 0.00 41.39 4.41
1965 2794 1.617850 AGTGAGTGTGAGGAAGAGCAG 59.382 52.381 0.00 0.00 0.00 4.24
1980 2809 4.298103 AGAGCAGTCCATGAAAATGAGT 57.702 40.909 0.00 0.00 0.00 3.41
2008 2837 1.002257 ACCACATCGATGCCTGCAA 60.002 52.632 25.11 0.00 0.00 4.08
2064 2893 3.340034 CCAAATTGCTGCATCCAACATT 58.660 40.909 1.84 0.00 0.00 2.71
2297 3126 1.518056 CGCTGTGCCACCATTTCTGT 61.518 55.000 0.00 0.00 0.00 3.41
2311 3140 0.396435 TTCTGTGCCTCGAACACCAT 59.604 50.000 13.90 0.00 37.22 3.55
2343 3172 2.311542 AGTTTTCCCCATCATAGTGCCA 59.688 45.455 0.00 0.00 0.00 4.92
2350 3179 3.559069 CCCATCATAGTGCCACAAATCT 58.441 45.455 0.00 0.00 0.00 2.40
2385 3214 4.452825 CACTGGATGCTCAGATCATTTCT 58.547 43.478 8.77 0.00 38.11 2.52
2413 3242 0.527113 AAATGCAATGCAGCGCACTA 59.473 45.000 14.98 0.00 43.65 2.74
2472 3301 0.179000 GAATCGAGGTCTGCATGGGT 59.821 55.000 0.00 0.00 0.00 4.51
2525 3354 0.034059 CTGCAGGAGTTTGAGACGGT 59.966 55.000 5.57 0.00 0.00 4.83
2693 3522 0.105593 GCAGGCTTCATCGGAGATGA 59.894 55.000 8.48 8.48 45.12 2.92
2756 3590 6.650120 CAGGTTGGTATTTACAGACCTGTAT 58.350 40.000 21.63 1.43 45.58 2.29
2763 3597 8.623903 TGGTATTTACAGACCTGTATTACTACG 58.376 37.037 19.18 0.00 44.54 3.51
2792 3626 5.940192 TTTGTCTGGCAAATGTACTACTG 57.060 39.130 2.81 0.00 41.68 2.74
2916 3750 3.842923 CATCCAGGAGCCGCGAGT 61.843 66.667 8.23 0.00 0.00 4.18
2946 3780 3.143728 TGCCGGTTCTTAGGTTTCTTTC 58.856 45.455 1.90 0.00 0.00 2.62
3006 4100 4.025401 CTGGCGGCGTCCAACAAC 62.025 66.667 20.32 0.00 35.36 3.32
3033 4127 3.591196 TTGATGTTATGTTGGCCTTGC 57.409 42.857 3.32 0.00 0.00 4.01
3035 4129 2.754552 TGATGTTATGTTGGCCTTGCTC 59.245 45.455 3.32 0.00 0.00 4.26
3036 4130 2.284754 TGTTATGTTGGCCTTGCTCA 57.715 45.000 3.32 0.00 0.00 4.26
3042 4136 1.073025 TTGGCCTTGCTCATCGTGT 59.927 52.632 3.32 0.00 0.00 4.49
3044 4138 2.401766 GGCCTTGCTCATCGTGTGG 61.402 63.158 0.00 0.00 0.00 4.17
3104 4198 1.267806 CTTGGCACCTTGTAGCTTGTG 59.732 52.381 0.00 0.00 0.00 3.33
3115 4209 2.093500 TGTAGCTTGTGCCATTCGATCT 60.093 45.455 0.00 0.00 40.80 2.75
3151 4245 2.262423 AGTGAGACCAAAGCCTGTTC 57.738 50.000 0.00 0.00 0.00 3.18
3153 4247 0.843309 TGAGACCAAAGCCTGTTCCA 59.157 50.000 0.00 0.00 0.00 3.53
3190 4284 7.675962 AATGAAAATGCATGCAACATACTTT 57.324 28.000 26.68 16.29 0.00 2.66
3223 4317 3.506067 CGAAAGTAAACAGCCCCAAGATT 59.494 43.478 0.00 0.00 0.00 2.40
3224 4318 4.615912 CGAAAGTAAACAGCCCCAAGATTG 60.616 45.833 0.00 0.00 0.00 2.67
3226 4320 4.650972 AGTAAACAGCCCCAAGATTGTA 57.349 40.909 0.00 0.00 0.00 2.41
3260 4354 5.590104 TGTTAATGGCATCGTCAATATCG 57.410 39.130 0.00 0.00 0.00 2.92
3327 4421 5.564550 ACCAAGATTGTGCTTCATAGAAGT 58.435 37.500 8.39 0.00 0.00 3.01
3410 4504 8.857694 AACTATCTACTCTATCACTAAGCTCC 57.142 38.462 0.00 0.00 0.00 4.70
3411 4505 7.399634 ACTATCTACTCTATCACTAAGCTCCC 58.600 42.308 0.00 0.00 0.00 4.30
3412 4506 5.915744 TCTACTCTATCACTAAGCTCCCT 57.084 43.478 0.00 0.00 0.00 4.20
3413 4507 7.576978 ATCTACTCTATCACTAAGCTCCCTA 57.423 40.000 0.00 0.00 0.00 3.53
3414 4508 7.011499 TCTACTCTATCACTAAGCTCCCTAG 57.989 44.000 0.00 0.00 0.00 3.02
3415 4509 4.993028 ACTCTATCACTAAGCTCCCTAGG 58.007 47.826 0.06 0.06 0.00 3.02
3416 4510 4.202631 ACTCTATCACTAAGCTCCCTAGGG 60.203 50.000 23.22 23.22 0.00 3.53
3417 4511 3.727923 TCTATCACTAAGCTCCCTAGGGT 59.272 47.826 27.58 10.89 36.47 4.34
3418 4512 2.942604 TCACTAAGCTCCCTAGGGTT 57.057 50.000 27.58 16.80 36.47 4.11
3419 4513 2.467880 TCACTAAGCTCCCTAGGGTTG 58.532 52.381 27.58 20.94 36.47 3.77
3420 4514 1.486726 CACTAAGCTCCCTAGGGTTGG 59.513 57.143 27.58 18.06 36.47 3.77
3421 4515 1.365028 ACTAAGCTCCCTAGGGTTGGA 59.635 52.381 27.58 7.26 36.47 3.53
3423 4517 0.621862 AAGCTCCCTAGGGTTGGAGG 60.622 60.000 27.58 12.26 46.79 4.30
3424 4518 2.747443 GCTCCCTAGGGTTGGAGGC 61.747 68.421 27.58 17.42 46.79 4.70
3425 4519 2.042261 TCCCTAGGGTTGGAGGCC 59.958 66.667 27.58 0.00 36.47 5.19
3426 4520 2.042930 CCCTAGGGTTGGAGGCCT 59.957 66.667 20.88 3.86 0.00 5.19
3427 4521 2.073101 CCCTAGGGTTGGAGGCCTC 61.073 68.421 25.59 25.59 0.00 4.70
3428 4522 1.003573 CCTAGGGTTGGAGGCCTCT 59.996 63.158 31.36 13.79 0.00 3.69
3429 4523 1.051556 CCTAGGGTTGGAGGCCTCTC 61.052 65.000 31.36 21.36 39.25 3.20
3430 4524 0.325671 CTAGGGTTGGAGGCCTCTCA 60.326 60.000 31.36 23.62 41.69 3.27
3431 4525 0.343372 TAGGGTTGGAGGCCTCTCAT 59.657 55.000 31.36 17.84 41.69 2.90
3432 4526 0.551131 AGGGTTGGAGGCCTCTCATT 60.551 55.000 31.36 10.53 41.69 2.57
3433 4527 0.106967 GGGTTGGAGGCCTCTCATTC 60.107 60.000 31.36 20.14 41.69 2.67
3434 4528 0.620556 GGTTGGAGGCCTCTCATTCA 59.379 55.000 31.36 17.93 41.69 2.57
3435 4529 1.004745 GGTTGGAGGCCTCTCATTCAA 59.995 52.381 31.36 22.47 41.69 2.69
3436 4530 2.357569 GGTTGGAGGCCTCTCATTCAAT 60.358 50.000 31.36 0.00 41.69 2.57
3437 4531 3.359950 GTTGGAGGCCTCTCATTCAATT 58.640 45.455 31.36 0.00 41.69 2.32
3438 4532 3.008835 TGGAGGCCTCTCATTCAATTG 57.991 47.619 31.36 0.00 41.69 2.32
3439 4533 2.305009 GGAGGCCTCTCATTCAATTGG 58.695 52.381 31.36 0.00 41.69 3.16
3440 4534 2.305009 GAGGCCTCTCATTCAATTGGG 58.695 52.381 26.25 0.00 39.74 4.12
3441 4535 1.063417 AGGCCTCTCATTCAATTGGGG 60.063 52.381 0.00 0.00 0.00 4.96
3442 4536 1.342374 GGCCTCTCATTCAATTGGGGT 60.342 52.381 5.42 0.00 0.00 4.95
3443 4537 2.027385 GCCTCTCATTCAATTGGGGTC 58.973 52.381 5.42 0.00 0.00 4.46
3444 4538 2.621407 GCCTCTCATTCAATTGGGGTCA 60.621 50.000 5.42 0.00 0.00 4.02
3445 4539 3.019564 CCTCTCATTCAATTGGGGTCAC 58.980 50.000 5.42 0.00 0.00 3.67
3446 4540 3.019564 CTCTCATTCAATTGGGGTCACC 58.980 50.000 5.42 0.00 40.81 4.02
3466 4560 4.370364 CCAATTTAGAATTGGGTCACCG 57.630 45.455 19.82 0.00 43.58 4.94
3467 4561 4.013728 CCAATTTAGAATTGGGTCACCGA 58.986 43.478 19.82 0.00 43.58 4.69
3468 4562 4.644685 CCAATTTAGAATTGGGTCACCGAT 59.355 41.667 19.82 0.00 43.58 4.18
3474 4568 3.934457 AATTGGGTCACCGATTTTGAC 57.066 42.857 0.00 0.00 46.69 3.18
3479 4573 1.792006 GTCACCGATTTTGACCGAGT 58.208 50.000 0.00 0.00 37.93 4.18
3480 4574 1.725164 GTCACCGATTTTGACCGAGTC 59.275 52.381 0.00 0.00 37.93 3.36
3481 4575 1.341852 TCACCGATTTTGACCGAGTCA 59.658 47.619 3.02 3.02 41.09 3.41
3492 4586 5.914898 TTGACCGAGTCAATAATCTCTCA 57.085 39.130 13.34 0.00 45.88 3.27
3493 4587 5.250235 TGACCGAGTCAATAATCTCTCAC 57.750 43.478 4.51 0.00 39.78 3.51
3494 4588 4.950475 TGACCGAGTCAATAATCTCTCACT 59.050 41.667 4.51 0.00 39.78 3.41
3495 4589 5.066634 TGACCGAGTCAATAATCTCTCACTC 59.933 44.000 4.51 0.00 39.78 3.51
3496 4590 4.950475 ACCGAGTCAATAATCTCTCACTCA 59.050 41.667 0.00 0.00 31.52 3.41
3497 4591 5.419155 ACCGAGTCAATAATCTCTCACTCAA 59.581 40.000 0.00 0.00 31.52 3.02
3498 4592 6.097554 ACCGAGTCAATAATCTCTCACTCAAT 59.902 38.462 0.00 0.00 31.52 2.57
3499 4593 6.983307 CCGAGTCAATAATCTCTCACTCAATT 59.017 38.462 0.00 0.00 31.52 2.32
3500 4594 7.168972 CCGAGTCAATAATCTCTCACTCAATTC 59.831 40.741 0.00 0.00 31.52 2.17
3501 4595 7.920151 CGAGTCAATAATCTCTCACTCAATTCT 59.080 37.037 0.00 0.00 31.52 2.40
3502 4596 9.598517 GAGTCAATAATCTCTCACTCAATTCTT 57.401 33.333 0.00 0.00 32.22 2.52
3503 4597 9.956640 AGTCAATAATCTCTCACTCAATTCTTT 57.043 29.630 0.00 0.00 0.00 2.52
3536 4630 9.591792 AGAATGCTCTTTTATTTATTTTGGAGC 57.408 29.630 0.00 0.00 43.30 4.70
3537 4631 9.591792 GAATGCTCTTTTATTTATTTTGGAGCT 57.408 29.630 11.81 0.00 43.37 4.09
3538 4632 9.591792 AATGCTCTTTTATTTATTTTGGAGCTC 57.408 29.630 4.71 4.71 43.37 4.09
3539 4633 8.353423 TGCTCTTTTATTTATTTTGGAGCTCT 57.647 30.769 14.64 0.00 43.37 4.09
3540 4634 8.462016 TGCTCTTTTATTTATTTTGGAGCTCTC 58.538 33.333 14.64 4.40 43.37 3.20
3541 4635 8.462016 GCTCTTTTATTTATTTTGGAGCTCTCA 58.538 33.333 14.64 7.25 40.87 3.27
3542 4636 9.780413 CTCTTTTATTTATTTTGGAGCTCTCAC 57.220 33.333 14.64 0.00 0.00 3.51
3543 4637 9.295825 TCTTTTATTTATTTTGGAGCTCTCACA 57.704 29.630 14.64 0.00 0.00 3.58
3547 4641 7.707624 ATTTATTTTGGAGCTCTCACATTCA 57.292 32.000 14.64 0.00 0.00 2.57
3548 4642 7.523293 TTTATTTTGGAGCTCTCACATTCAA 57.477 32.000 14.64 4.43 0.00 2.69
3549 4643 7.523293 TTATTTTGGAGCTCTCACATTCAAA 57.477 32.000 14.64 10.48 0.00 2.69
3550 4644 6.600882 ATTTTGGAGCTCTCACATTCAAAT 57.399 33.333 14.64 9.17 0.00 2.32
3551 4645 5.633830 TTTGGAGCTCTCACATTCAAATC 57.366 39.130 14.64 0.00 0.00 2.17
3552 4646 3.614092 TGGAGCTCTCACATTCAAATCC 58.386 45.455 14.64 0.00 0.00 3.01
3553 4647 2.611292 GGAGCTCTCACATTCAAATCCG 59.389 50.000 14.64 0.00 0.00 4.18
3554 4648 3.525537 GAGCTCTCACATTCAAATCCGA 58.474 45.455 6.43 0.00 0.00 4.55
3555 4649 3.935203 GAGCTCTCACATTCAAATCCGAA 59.065 43.478 6.43 0.00 0.00 4.30
3556 4650 3.937706 AGCTCTCACATTCAAATCCGAAG 59.062 43.478 0.00 0.00 0.00 3.79
3557 4651 3.686726 GCTCTCACATTCAAATCCGAAGT 59.313 43.478 0.00 0.00 0.00 3.01
3558 4652 4.154918 GCTCTCACATTCAAATCCGAAGTT 59.845 41.667 0.00 0.00 0.00 2.66
3559 4653 5.672321 GCTCTCACATTCAAATCCGAAGTTC 60.672 44.000 0.00 0.00 0.00 3.01
3560 4654 5.304778 TCTCACATTCAAATCCGAAGTTCA 58.695 37.500 3.32 0.00 0.00 3.18
3561 4655 5.409520 TCTCACATTCAAATCCGAAGTTCAG 59.590 40.000 3.32 0.00 0.00 3.02
3562 4656 5.063204 TCACATTCAAATCCGAAGTTCAGT 58.937 37.500 3.32 0.00 0.00 3.41
3563 4657 6.227522 TCACATTCAAATCCGAAGTTCAGTA 58.772 36.000 3.32 0.00 0.00 2.74
3564 4658 6.878923 TCACATTCAAATCCGAAGTTCAGTAT 59.121 34.615 3.32 0.00 0.00 2.12
3565 4659 7.390440 TCACATTCAAATCCGAAGTTCAGTATT 59.610 33.333 3.32 0.00 0.00 1.89
3566 4660 7.482743 CACATTCAAATCCGAAGTTCAGTATTG 59.517 37.037 3.32 3.35 0.00 1.90
3567 4661 7.390440 ACATTCAAATCCGAAGTTCAGTATTGA 59.610 33.333 3.32 5.54 0.00 2.57
3568 4662 7.737972 TTCAAATCCGAAGTTCAGTATTGAA 57.262 32.000 14.74 14.74 40.92 2.69
3569 4663 7.921786 TCAAATCCGAAGTTCAGTATTGAAT 57.078 32.000 3.79 0.00 44.62 2.57
3570 4664 8.335532 TCAAATCCGAAGTTCAGTATTGAATT 57.664 30.769 3.79 0.00 44.62 2.17
3571 4665 8.792633 TCAAATCCGAAGTTCAGTATTGAATTT 58.207 29.630 8.20 8.20 44.62 1.82
3572 4666 8.853345 CAAATCCGAAGTTCAGTATTGAATTTG 58.147 33.333 12.44 9.15 44.62 2.32
3573 4667 6.494893 TCCGAAGTTCAGTATTGAATTTGG 57.505 37.500 12.44 14.39 44.62 3.28
3574 4668 5.640732 CCGAAGTTCAGTATTGAATTTGGG 58.359 41.667 17.70 17.70 45.35 4.12
3575 4669 5.183140 CCGAAGTTCAGTATTGAATTTGGGT 59.817 40.000 20.87 0.00 45.45 4.51
3576 4670 6.314784 CGAAGTTCAGTATTGAATTTGGGTC 58.685 40.000 12.44 0.00 44.62 4.46
3577 4671 6.072728 CGAAGTTCAGTATTGAATTTGGGTCA 60.073 38.462 12.44 0.00 44.62 4.02
3578 4672 7.362056 CGAAGTTCAGTATTGAATTTGGGTCAT 60.362 37.037 12.44 0.00 44.62 3.06
3579 4673 7.161773 AGTTCAGTATTGAATTTGGGTCATG 57.838 36.000 3.79 0.00 44.62 3.07
3580 4674 6.947733 AGTTCAGTATTGAATTTGGGTCATGA 59.052 34.615 3.79 0.00 44.62 3.07
3581 4675 7.616935 AGTTCAGTATTGAATTTGGGTCATGAT 59.383 33.333 3.79 0.00 44.62 2.45
3582 4676 7.959658 TCAGTATTGAATTTGGGTCATGATT 57.040 32.000 0.00 0.00 0.00 2.57
3583 4677 8.365060 TCAGTATTGAATTTGGGTCATGATTT 57.635 30.769 0.00 0.00 0.00 2.17
3584 4678 8.814931 TCAGTATTGAATTTGGGTCATGATTTT 58.185 29.630 0.00 0.00 0.00 1.82
3585 4679 8.875803 CAGTATTGAATTTGGGTCATGATTTTG 58.124 33.333 0.00 0.00 0.00 2.44
3586 4680 8.814931 AGTATTGAATTTGGGTCATGATTTTGA 58.185 29.630 0.00 0.00 0.00 2.69
3587 4681 7.910441 ATTGAATTTGGGTCATGATTTTGAC 57.090 32.000 0.00 0.00 44.27 3.18
3588 4682 6.669125 TGAATTTGGGTCATGATTTTGACT 57.331 33.333 0.00 0.00 44.39 3.41
3589 4683 6.457355 TGAATTTGGGTCATGATTTTGACTG 58.543 36.000 0.00 0.00 44.39 3.51
3590 4684 4.870123 TTTGGGTCATGATTTTGACTGG 57.130 40.909 0.00 0.00 44.39 4.00
3591 4685 2.806434 TGGGTCATGATTTTGACTGGG 58.194 47.619 0.00 0.00 44.39 4.45
3592 4686 2.109834 TGGGTCATGATTTTGACTGGGT 59.890 45.455 0.00 0.00 44.39 4.51
3593 4687 2.755103 GGGTCATGATTTTGACTGGGTC 59.245 50.000 0.00 0.00 44.39 4.46
3594 4688 3.420893 GGTCATGATTTTGACTGGGTCA 58.579 45.455 0.00 0.00 44.39 4.02
3627 4721 5.678132 AAATCAATCAAAAGCAAACTGGC 57.322 34.783 0.00 0.00 0.00 4.85
3628 4722 3.110447 TCAATCAAAAGCAAACTGGCC 57.890 42.857 0.00 0.00 0.00 5.36
3629 4723 2.699846 TCAATCAAAAGCAAACTGGCCT 59.300 40.909 3.32 0.00 0.00 5.19
3630 4724 3.894427 TCAATCAAAAGCAAACTGGCCTA 59.106 39.130 3.32 0.00 0.00 3.93
3631 4725 4.527816 TCAATCAAAAGCAAACTGGCCTAT 59.472 37.500 3.32 0.00 0.00 2.57
3632 4726 5.714333 TCAATCAAAAGCAAACTGGCCTATA 59.286 36.000 3.32 0.00 0.00 1.31
3633 4727 6.210385 TCAATCAAAAGCAAACTGGCCTATAA 59.790 34.615 3.32 0.00 0.00 0.98
3634 4728 6.603940 ATCAAAAGCAAACTGGCCTATAAA 57.396 33.333 3.32 0.00 0.00 1.40
3635 4729 6.412362 TCAAAAGCAAACTGGCCTATAAAA 57.588 33.333 3.32 0.00 0.00 1.52
3636 4730 6.220201 TCAAAAGCAAACTGGCCTATAAAAC 58.780 36.000 3.32 0.00 0.00 2.43
3637 4731 4.801330 AAGCAAACTGGCCTATAAAACC 57.199 40.909 3.32 0.00 0.00 3.27
3638 4732 3.773560 AGCAAACTGGCCTATAAAACCA 58.226 40.909 3.32 0.00 0.00 3.67
3639 4733 4.352893 AGCAAACTGGCCTATAAAACCAT 58.647 39.130 3.32 0.00 31.79 3.55
3640 4734 5.515106 AGCAAACTGGCCTATAAAACCATA 58.485 37.500 3.32 0.00 31.79 2.74
3641 4735 6.136155 AGCAAACTGGCCTATAAAACCATAT 58.864 36.000 3.32 0.00 31.79 1.78
3642 4736 6.265422 AGCAAACTGGCCTATAAAACCATATC 59.735 38.462 3.32 0.00 31.79 1.63
3643 4737 6.040391 GCAAACTGGCCTATAAAACCATATCA 59.960 38.462 3.32 0.00 31.79 2.15
3644 4738 7.417342 GCAAACTGGCCTATAAAACCATATCAA 60.417 37.037 3.32 0.00 31.79 2.57
3645 4739 8.641541 CAAACTGGCCTATAAAACCATATCAAT 58.358 33.333 3.32 0.00 31.79 2.57
3646 4740 8.409358 AACTGGCCTATAAAACCATATCAATC 57.591 34.615 3.32 0.00 31.79 2.67
3647 4741 6.948309 ACTGGCCTATAAAACCATATCAATCC 59.052 38.462 3.32 0.00 31.79 3.01
3648 4742 6.252995 TGGCCTATAAAACCATATCAATCCC 58.747 40.000 3.32 0.00 0.00 3.85
3649 4743 5.357032 GGCCTATAAAACCATATCAATCCCG 59.643 44.000 0.00 0.00 0.00 5.14
3650 4744 5.944007 GCCTATAAAACCATATCAATCCCGT 59.056 40.000 0.00 0.00 0.00 5.28
3651 4745 6.128007 GCCTATAAAACCATATCAATCCCGTG 60.128 42.308 0.00 0.00 0.00 4.94
3652 4746 5.705609 ATAAAACCATATCAATCCCGTGC 57.294 39.130 0.00 0.00 0.00 5.34
3653 4747 2.727123 AACCATATCAATCCCGTGCA 57.273 45.000 0.00 0.00 0.00 4.57
3654 4748 1.967319 ACCATATCAATCCCGTGCAC 58.033 50.000 6.82 6.82 0.00 4.57
3655 4749 1.238439 CCATATCAATCCCGTGCACC 58.762 55.000 12.15 0.00 0.00 5.01
3656 4750 1.238439 CATATCAATCCCGTGCACCC 58.762 55.000 12.15 0.00 0.00 4.61
3657 4751 0.250295 ATATCAATCCCGTGCACCCG 60.250 55.000 12.15 0.00 0.00 5.28
3658 4752 2.933878 TATCAATCCCGTGCACCCGC 62.934 60.000 12.15 0.00 39.24 6.13
3667 4761 4.615901 TGCACCCGCATCACTTAG 57.384 55.556 0.00 0.00 45.36 2.18
3668 4762 1.979262 TGCACCCGCATCACTTAGA 59.021 52.632 0.00 0.00 45.36 2.10
3669 4763 0.391130 TGCACCCGCATCACTTAGAC 60.391 55.000 0.00 0.00 45.36 2.59
3670 4764 0.391130 GCACCCGCATCACTTAGACA 60.391 55.000 0.00 0.00 38.36 3.41
3671 4765 1.943968 GCACCCGCATCACTTAGACAA 60.944 52.381 0.00 0.00 38.36 3.18
3672 4766 2.422597 CACCCGCATCACTTAGACAAA 58.577 47.619 0.00 0.00 0.00 2.83
3673 4767 2.811431 CACCCGCATCACTTAGACAAAA 59.189 45.455 0.00 0.00 0.00 2.44
3674 4768 3.074412 ACCCGCATCACTTAGACAAAAG 58.926 45.455 0.00 0.00 0.00 2.27
3675 4769 3.244422 ACCCGCATCACTTAGACAAAAGA 60.244 43.478 0.00 0.00 0.00 2.52
3676 4770 3.751175 CCCGCATCACTTAGACAAAAGAA 59.249 43.478 0.00 0.00 0.00 2.52
3677 4771 4.142816 CCCGCATCACTTAGACAAAAGAAG 60.143 45.833 0.00 0.00 0.00 2.85
3678 4772 4.398247 CGCATCACTTAGACAAAAGAAGC 58.602 43.478 0.00 0.00 0.00 3.86
3679 4773 4.398247 GCATCACTTAGACAAAAGAAGCG 58.602 43.478 0.00 0.00 0.00 4.68
3680 4774 4.398247 CATCACTTAGACAAAAGAAGCGC 58.602 43.478 0.00 0.00 0.00 5.92
3681 4775 2.806244 TCACTTAGACAAAAGAAGCGCC 59.194 45.455 2.29 0.00 0.00 6.53
3682 4776 2.548057 CACTTAGACAAAAGAAGCGCCA 59.452 45.455 2.29 0.00 0.00 5.69
3683 4777 3.003275 CACTTAGACAAAAGAAGCGCCAA 59.997 43.478 2.29 0.00 0.00 4.52
3684 4778 3.003378 ACTTAGACAAAAGAAGCGCCAAC 59.997 43.478 2.29 0.00 0.00 3.77
3685 4779 1.388547 AGACAAAAGAAGCGCCAACA 58.611 45.000 2.29 0.00 0.00 3.33
3686 4780 1.956477 AGACAAAAGAAGCGCCAACAT 59.044 42.857 2.29 0.00 0.00 2.71
3687 4781 2.053627 GACAAAAGAAGCGCCAACATG 58.946 47.619 2.29 0.00 0.00 3.21
3688 4782 1.408702 ACAAAAGAAGCGCCAACATGT 59.591 42.857 2.29 0.00 0.00 3.21
3689 4783 1.788308 CAAAAGAAGCGCCAACATGTG 59.212 47.619 2.29 0.00 0.00 3.21
3690 4784 1.317613 AAAGAAGCGCCAACATGTGA 58.682 45.000 2.29 0.00 0.00 3.58
3691 4785 1.538047 AAGAAGCGCCAACATGTGAT 58.462 45.000 2.29 0.00 0.00 3.06
3692 4786 2.401583 AGAAGCGCCAACATGTGATA 57.598 45.000 2.29 0.00 0.00 2.15
3693 4787 2.009774 AGAAGCGCCAACATGTGATAC 58.990 47.619 2.29 0.00 0.00 2.24
3694 4788 2.009774 GAAGCGCCAACATGTGATACT 58.990 47.619 2.29 0.00 0.00 2.12
3695 4789 2.113860 AGCGCCAACATGTGATACTT 57.886 45.000 2.29 0.00 0.00 2.24
3696 4790 2.436417 AGCGCCAACATGTGATACTTT 58.564 42.857 2.29 0.00 0.00 2.66
3697 4791 3.605634 AGCGCCAACATGTGATACTTTA 58.394 40.909 2.29 0.00 0.00 1.85
3698 4792 3.623060 AGCGCCAACATGTGATACTTTAG 59.377 43.478 2.29 0.00 0.00 1.85
3699 4793 3.788797 GCGCCAACATGTGATACTTTAGC 60.789 47.826 0.00 0.00 0.00 3.09
3700 4794 3.373748 CGCCAACATGTGATACTTTAGCA 59.626 43.478 0.00 0.00 0.00 3.49
3701 4795 4.662145 GCCAACATGTGATACTTTAGCAC 58.338 43.478 0.00 0.00 44.83 4.40
3702 4796 4.438744 GCCAACATGTGATACTTTAGCACC 60.439 45.833 0.00 0.00 44.02 5.01
3703 4797 4.699735 CCAACATGTGATACTTTAGCACCA 59.300 41.667 0.00 0.00 44.02 4.17
3704 4798 5.182950 CCAACATGTGATACTTTAGCACCAA 59.817 40.000 0.00 0.00 44.02 3.67
3705 4799 6.127647 CCAACATGTGATACTTTAGCACCAAT 60.128 38.462 0.00 0.00 44.02 3.16
3706 4800 7.066887 CCAACATGTGATACTTTAGCACCAATA 59.933 37.037 0.00 0.00 44.02 1.90
3707 4801 8.623903 CAACATGTGATACTTTAGCACCAATAT 58.376 33.333 0.00 0.00 44.02 1.28
3708 4802 9.845740 AACATGTGATACTTTAGCACCAATATA 57.154 29.630 0.00 0.00 44.02 0.86
3709 4803 9.494271 ACATGTGATACTTTAGCACCAATATAG 57.506 33.333 0.00 0.00 44.02 1.31
3710 4804 9.494271 CATGTGATACTTTAGCACCAATATAGT 57.506 33.333 0.00 0.00 44.02 2.12
3718 4812 9.658799 ACTTTAGCACCAATATAGTATATGCTG 57.341 33.333 19.51 9.44 41.75 4.41
3719 4813 8.492673 TTTAGCACCAATATAGTATATGCTGC 57.507 34.615 19.51 16.62 41.75 5.25
3720 4814 5.431765 AGCACCAATATAGTATATGCTGCC 58.568 41.667 12.95 0.79 40.29 4.85
3721 4815 5.045651 AGCACCAATATAGTATATGCTGCCA 60.046 40.000 12.95 0.00 40.29 4.92
3722 4816 5.824624 GCACCAATATAGTATATGCTGCCAT 59.175 40.000 3.24 0.00 35.44 4.40
3723 4817 6.017605 GCACCAATATAGTATATGCTGCCATC 60.018 42.308 3.24 0.00 32.85 3.51
3724 4818 7.049754 CACCAATATAGTATATGCTGCCATCA 58.950 38.462 3.24 0.00 32.85 3.07
3725 4819 7.553760 CACCAATATAGTATATGCTGCCATCAA 59.446 37.037 3.24 0.00 32.85 2.57
3726 4820 7.554118 ACCAATATAGTATATGCTGCCATCAAC 59.446 37.037 3.24 0.00 32.85 3.18
3727 4821 7.254556 CCAATATAGTATATGCTGCCATCAACG 60.255 40.741 3.24 0.00 32.85 4.10
3728 4822 2.146342 AGTATATGCTGCCATCAACGC 58.854 47.619 0.00 0.00 32.85 4.84
3729 4823 1.872952 GTATATGCTGCCATCAACGCA 59.127 47.619 0.00 0.00 36.75 5.24
3737 4831 3.383620 TGCCATCAACGCAGAAAATTT 57.616 38.095 0.00 0.00 0.00 1.82
3738 4832 3.316283 TGCCATCAACGCAGAAAATTTC 58.684 40.909 0.00 0.00 0.00 2.17
3739 4833 3.005684 TGCCATCAACGCAGAAAATTTCT 59.994 39.130 1.80 1.80 41.70 2.52
3740 4834 3.609807 GCCATCAACGCAGAAAATTTCTC 59.390 43.478 5.09 0.82 38.11 2.87
3741 4835 4.168760 CCATCAACGCAGAAAATTTCTCC 58.831 43.478 5.09 0.00 38.11 3.71
3742 4836 4.321156 CCATCAACGCAGAAAATTTCTCCA 60.321 41.667 5.09 0.00 38.11 3.86
3743 4837 4.223320 TCAACGCAGAAAATTTCTCCAC 57.777 40.909 5.09 0.00 38.11 4.02
3744 4838 3.629855 TCAACGCAGAAAATTTCTCCACA 59.370 39.130 5.09 0.00 38.11 4.17
3745 4839 4.278170 TCAACGCAGAAAATTTCTCCACAT 59.722 37.500 5.09 0.00 38.11 3.21
3746 4840 5.471797 TCAACGCAGAAAATTTCTCCACATA 59.528 36.000 5.09 0.00 38.11 2.29
3747 4841 5.957842 ACGCAGAAAATTTCTCCACATAA 57.042 34.783 5.09 0.00 38.11 1.90
3748 4842 5.942872 ACGCAGAAAATTTCTCCACATAAG 58.057 37.500 5.09 0.00 38.11 1.73
3749 4843 5.473504 ACGCAGAAAATTTCTCCACATAAGT 59.526 36.000 5.09 0.00 38.11 2.24
3750 4844 6.024049 CGCAGAAAATTTCTCCACATAAGTC 58.976 40.000 5.09 0.00 38.11 3.01
3751 4845 6.128172 CGCAGAAAATTTCTCCACATAAGTCT 60.128 38.462 5.09 0.00 38.11 3.24
3752 4846 7.025963 GCAGAAAATTTCTCCACATAAGTCTG 58.974 38.462 5.09 0.00 38.11 3.51
3753 4847 7.094634 GCAGAAAATTTCTCCACATAAGTCTGA 60.095 37.037 5.09 0.00 38.11 3.27
3754 4848 8.449397 CAGAAAATTTCTCCACATAAGTCTGAG 58.551 37.037 5.09 0.00 38.11 3.35
3755 4849 8.160106 AGAAAATTTCTCCACATAAGTCTGAGT 58.840 33.333 1.80 0.00 34.07 3.41
3756 4850 8.697507 AAAATTTCTCCACATAAGTCTGAGTT 57.302 30.769 2.89 2.89 0.00 3.01
3757 4851 7.678947 AATTTCTCCACATAAGTCTGAGTTG 57.321 36.000 7.98 0.00 0.00 3.16
3758 4852 6.419484 TTTCTCCACATAAGTCTGAGTTGA 57.581 37.500 7.98 0.00 0.00 3.18
3759 4853 6.611613 TTCTCCACATAAGTCTGAGTTGAT 57.388 37.500 7.98 0.00 0.00 2.57
3760 4854 6.611613 TCTCCACATAAGTCTGAGTTGATT 57.388 37.500 7.98 0.00 0.00 2.57
3761 4855 7.718334 TCTCCACATAAGTCTGAGTTGATTA 57.282 36.000 7.98 0.00 0.00 1.75
3762 4856 8.134202 TCTCCACATAAGTCTGAGTTGATTAA 57.866 34.615 7.98 0.00 0.00 1.40
3763 4857 8.035394 TCTCCACATAAGTCTGAGTTGATTAAC 58.965 37.037 7.98 0.00 37.06 2.01
3765 4859 7.819415 TCCACATAAGTCTGAGTTGATTAACTG 59.181 37.037 7.73 0.00 46.79 3.16
3766 4860 7.819415 CCACATAAGTCTGAGTTGATTAACTGA 59.181 37.037 7.73 0.00 46.79 3.41
3767 4861 8.651588 CACATAAGTCTGAGTTGATTAACTGAC 58.348 37.037 7.73 9.72 46.79 3.51
3768 4862 8.367911 ACATAAGTCTGAGTTGATTAACTGACA 58.632 33.333 17.62 7.34 46.79 3.58
3769 4863 9.208022 CATAAGTCTGAGTTGATTAACTGACAA 57.792 33.333 17.62 9.43 46.79 3.18
3770 4864 7.721286 AAGTCTGAGTTGATTAACTGACAAG 57.279 36.000 17.62 7.64 46.79 3.16
3771 4865 7.055667 AGTCTGAGTTGATTAACTGACAAGA 57.944 36.000 17.62 9.28 46.79 3.02
3772 4866 6.926272 AGTCTGAGTTGATTAACTGACAAGAC 59.074 38.462 17.62 16.98 46.79 3.01
3773 4867 6.701841 GTCTGAGTTGATTAACTGACAAGACA 59.298 38.462 7.73 0.00 46.79 3.41
3774 4868 7.224753 GTCTGAGTTGATTAACTGACAAGACAA 59.775 37.037 7.73 0.00 46.79 3.18
3775 4869 7.768582 TCTGAGTTGATTAACTGACAAGACAAA 59.231 33.333 7.73 0.00 46.79 2.83
3776 4870 8.275015 TGAGTTGATTAACTGACAAGACAAAA 57.725 30.769 7.73 0.00 46.79 2.44
3777 4871 8.902806 TGAGTTGATTAACTGACAAGACAAAAT 58.097 29.630 7.73 0.00 46.79 1.82
3778 4872 9.387123 GAGTTGATTAACTGACAAGACAAAATC 57.613 33.333 7.73 0.00 46.79 2.17
3779 4873 8.902806 AGTTGATTAACTGACAAGACAAAATCA 58.097 29.630 1.44 0.00 45.17 2.57
3780 4874 8.958043 GTTGATTAACTGACAAGACAAAATCAC 58.042 33.333 0.00 0.00 33.94 3.06
3781 4875 8.219546 TGATTAACTGACAAGACAAAATCACA 57.780 30.769 0.00 0.00 0.00 3.58
3782 4876 8.128582 TGATTAACTGACAAGACAAAATCACAC 58.871 33.333 0.00 0.00 0.00 3.82
3783 4877 4.900635 ACTGACAAGACAAAATCACACC 57.099 40.909 0.00 0.00 0.00 4.16
3784 4878 4.269183 ACTGACAAGACAAAATCACACCA 58.731 39.130 0.00 0.00 0.00 4.17
3785 4879 4.096382 ACTGACAAGACAAAATCACACCAC 59.904 41.667 0.00 0.00 0.00 4.16
3786 4880 4.013050 TGACAAGACAAAATCACACCACA 58.987 39.130 0.00 0.00 0.00 4.17
3787 4881 4.460731 TGACAAGACAAAATCACACCACAA 59.539 37.500 0.00 0.00 0.00 3.33
3788 4882 5.047731 TGACAAGACAAAATCACACCACAAA 60.048 36.000 0.00 0.00 0.00 2.83
3789 4883 5.788450 ACAAGACAAAATCACACCACAAAA 58.212 33.333 0.00 0.00 0.00 2.44
3790 4884 5.868801 ACAAGACAAAATCACACCACAAAAG 59.131 36.000 0.00 0.00 0.00 2.27
3791 4885 5.009854 AGACAAAATCACACCACAAAAGG 57.990 39.130 0.00 0.00 0.00 3.11
3792 4886 3.530535 ACAAAATCACACCACAAAAGGC 58.469 40.909 0.00 0.00 0.00 4.35
3793 4887 2.871633 CAAAATCACACCACAAAAGGCC 59.128 45.455 0.00 0.00 0.00 5.19
3794 4888 1.047801 AATCACACCACAAAAGGCCC 58.952 50.000 0.00 0.00 0.00 5.80
3795 4889 0.105760 ATCACACCACAAAAGGCCCA 60.106 50.000 0.00 0.00 0.00 5.36
3796 4890 0.105760 TCACACCACAAAAGGCCCAT 60.106 50.000 0.00 0.00 0.00 4.00
3797 4891 0.318120 CACACCACAAAAGGCCCATC 59.682 55.000 0.00 0.00 0.00 3.51
3798 4892 0.105760 ACACCACAAAAGGCCCATCA 60.106 50.000 0.00 0.00 0.00 3.07
3799 4893 1.047002 CACCACAAAAGGCCCATCAA 58.953 50.000 0.00 0.00 0.00 2.57
3800 4894 1.415659 CACCACAAAAGGCCCATCAAA 59.584 47.619 0.00 0.00 0.00 2.69
3801 4895 2.122768 ACCACAAAAGGCCCATCAAAA 58.877 42.857 0.00 0.00 0.00 2.44
3802 4896 2.158827 ACCACAAAAGGCCCATCAAAAC 60.159 45.455 0.00 0.00 0.00 2.43
3803 4897 2.158842 CCACAAAAGGCCCATCAAAACA 60.159 45.455 0.00 0.00 0.00 2.83
3804 4898 2.871633 CACAAAAGGCCCATCAAAACAC 59.128 45.455 0.00 0.00 0.00 3.32
3805 4899 2.158827 ACAAAAGGCCCATCAAAACACC 60.159 45.455 0.00 0.00 0.00 4.16
3806 4900 0.678950 AAAGGCCCATCAAAACACCG 59.321 50.000 0.00 0.00 0.00 4.94
3807 4901 1.815817 AAGGCCCATCAAAACACCGC 61.816 55.000 0.00 0.00 0.00 5.68
3808 4902 2.569354 GGCCCATCAAAACACCGCA 61.569 57.895 0.00 0.00 0.00 5.69
3809 4903 1.591183 GCCCATCAAAACACCGCAT 59.409 52.632 0.00 0.00 0.00 4.73
3810 4904 0.037419 GCCCATCAAAACACCGCATT 60.037 50.000 0.00 0.00 0.00 3.56
3811 4905 1.203523 GCCCATCAAAACACCGCATTA 59.796 47.619 0.00 0.00 0.00 1.90
3812 4906 2.159114 GCCCATCAAAACACCGCATTAT 60.159 45.455 0.00 0.00 0.00 1.28
3813 4907 3.067461 GCCCATCAAAACACCGCATTATA 59.933 43.478 0.00 0.00 0.00 0.98
3814 4908 4.261994 GCCCATCAAAACACCGCATTATAT 60.262 41.667 0.00 0.00 0.00 0.86
3815 4909 5.221880 CCCATCAAAACACCGCATTATATG 58.778 41.667 0.00 0.00 0.00 1.78
3816 4910 5.009510 CCCATCAAAACACCGCATTATATGA 59.990 40.000 0.00 0.00 0.00 2.15
3817 4911 6.460814 CCCATCAAAACACCGCATTATATGAA 60.461 38.462 0.00 0.00 0.00 2.57
3818 4912 7.147312 CCATCAAAACACCGCATTATATGAAT 58.853 34.615 0.00 0.00 0.00 2.57
3819 4913 8.296000 CCATCAAAACACCGCATTATATGAATA 58.704 33.333 0.00 0.00 0.00 1.75
3820 4914 9.676195 CATCAAAACACCGCATTATATGAATAA 57.324 29.630 0.00 0.00 32.20 1.40
3826 4920 9.730420 AACACCGCATTATATGAATAAAAGAAC 57.270 29.630 0.00 0.00 31.44 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 5.269189 GGGGGAATCAAATTTCTCTTGGTA 58.731 41.667 0.00 0.00 0.00 3.25
251 252 0.759346 GGCCACCGTATTCTCCTCAT 59.241 55.000 0.00 0.00 0.00 2.90
289 290 1.380302 GGGTCTGGAGGCACAATGT 59.620 57.895 0.00 0.00 0.00 2.71
331 332 4.100279 ACCGAAGTTCCTTCCTTTTGAT 57.900 40.909 0.00 0.00 37.20 2.57
377 378 9.956720 GTAAAGCTACGATATAACCAAGAGTAA 57.043 33.333 0.00 0.00 0.00 2.24
378 379 9.347240 AGTAAAGCTACGATATAACCAAGAGTA 57.653 33.333 0.00 0.00 32.87 2.59
391 392 3.125316 GCTTGCACAAGTAAAGCTACGAT 59.875 43.478 11.77 0.00 42.40 3.73
397 398 6.200854 ACAAAATAAGCTTGCACAAGTAAAGC 59.799 34.615 9.86 10.27 45.30 3.51
418 419 4.099266 AGCAAGCAAAGGATACAACACAAA 59.901 37.500 0.00 0.00 41.41 2.83
444 446 4.852134 TGATGCAACAACAATAAGCACT 57.148 36.364 0.00 0.00 38.12 4.40
606 611 4.337060 TGTGGCGTGTCGTCTCGG 62.337 66.667 6.29 0.00 30.55 4.63
642 647 2.261671 GTCTTCGAAGCTCCGGCA 59.738 61.111 20.56 0.00 41.70 5.69
643 648 2.509561 GGTCTTCGAAGCTCCGGC 60.510 66.667 20.56 0.00 39.06 6.13
755 774 3.027170 GCACACATCGTCGGGCAAG 62.027 63.158 0.00 0.00 0.00 4.01
776 795 4.415332 TTCCTCTCGTGTCGCCGC 62.415 66.667 0.00 0.00 0.00 6.53
780 799 0.961358 ACCTCCTTCCTCTCGTGTCG 60.961 60.000 0.00 0.00 0.00 4.35
782 801 0.900647 CCACCTCCTTCCTCTCGTGT 60.901 60.000 0.00 0.00 0.00 4.49
787 806 1.394151 CCCTCCACCTCCTTCCTCT 59.606 63.158 0.00 0.00 0.00 3.69
796 815 4.285790 TTCCCTGCCCCTCCACCT 62.286 66.667 0.00 0.00 0.00 4.00
797 816 3.732849 CTTCCCTGCCCCTCCACC 61.733 72.222 0.00 0.00 0.00 4.61
798 817 3.732849 CCTTCCCTGCCCCTCCAC 61.733 72.222 0.00 0.00 0.00 4.02
800 819 3.732849 CACCTTCCCTGCCCCTCC 61.733 72.222 0.00 0.00 0.00 4.30
812 831 2.203582 GAAAACCGCCCCCACCTT 60.204 61.111 0.00 0.00 0.00 3.50
819 838 4.704965 AGTAAGATAGATGAAAACCGCCC 58.295 43.478 0.00 0.00 0.00 6.13
835 1118 9.483489 TCATAGTGGGAAATAAGTGTAGTAAGA 57.517 33.333 0.00 0.00 0.00 2.10
838 1121 9.429109 TGATCATAGTGGGAAATAAGTGTAGTA 57.571 33.333 0.00 0.00 0.00 1.82
839 1122 8.319057 TGATCATAGTGGGAAATAAGTGTAGT 57.681 34.615 0.00 0.00 0.00 2.73
842 1125 6.058183 GCTGATCATAGTGGGAAATAAGTGT 58.942 40.000 0.00 0.00 0.00 3.55
846 1129 5.912149 AGGCTGATCATAGTGGGAAATAA 57.088 39.130 0.00 0.00 0.00 1.40
850 1133 3.071602 GCTTAGGCTGATCATAGTGGGAA 59.928 47.826 0.00 0.00 35.22 3.97
851 1134 2.634940 GCTTAGGCTGATCATAGTGGGA 59.365 50.000 0.00 0.00 35.22 4.37
852 1135 2.611473 CGCTTAGGCTGATCATAGTGGG 60.611 54.545 0.00 0.00 36.09 4.61
853 1136 2.681706 CGCTTAGGCTGATCATAGTGG 58.318 52.381 0.00 0.00 36.09 4.00
854 1137 2.064762 GCGCTTAGGCTGATCATAGTG 58.935 52.381 0.00 0.00 36.09 2.74
855 1138 1.688735 TGCGCTTAGGCTGATCATAGT 59.311 47.619 9.73 0.00 36.09 2.12
856 1139 2.445565 TGCGCTTAGGCTGATCATAG 57.554 50.000 9.73 0.00 36.09 2.23
857 1140 2.613725 CCATGCGCTTAGGCTGATCATA 60.614 50.000 9.73 0.00 36.09 2.15
858 1141 1.520494 CATGCGCTTAGGCTGATCAT 58.480 50.000 9.73 0.00 36.09 2.45
860 1143 0.250038 TCCATGCGCTTAGGCTGATC 60.250 55.000 9.73 0.00 36.09 2.92
861 1144 0.533755 GTCCATGCGCTTAGGCTGAT 60.534 55.000 9.73 0.00 36.09 2.90
862 1145 1.153369 GTCCATGCGCTTAGGCTGA 60.153 57.895 9.73 0.00 36.09 4.26
863 1146 2.528743 CGTCCATGCGCTTAGGCTG 61.529 63.158 9.73 0.00 36.09 4.85
864 1147 2.202932 CGTCCATGCGCTTAGGCT 60.203 61.111 9.73 0.00 36.09 4.58
865 1148 2.202878 TCGTCCATGCGCTTAGGC 60.203 61.111 9.73 0.00 0.00 3.93
866 1149 1.141881 ACTCGTCCATGCGCTTAGG 59.858 57.895 9.73 8.07 0.00 2.69
873 1644 0.530744 TAGTCCACACTCGTCCATGC 59.469 55.000 0.00 0.00 33.62 4.06
876 1647 0.111832 AGGTAGTCCACACTCGTCCA 59.888 55.000 0.00 0.00 33.62 4.02
877 1648 0.810016 GAGGTAGTCCACACTCGTCC 59.190 60.000 0.00 0.00 33.62 4.79
879 1650 2.552802 CGAGGTAGTCCACACTCGT 58.447 57.895 0.00 0.00 45.48 4.18
890 1661 1.095600 TGCTGCTGACTACGAGGTAG 58.904 55.000 0.00 1.41 41.43 3.18
892 1663 0.898320 ATTGCTGCTGACTACGAGGT 59.102 50.000 0.00 0.00 0.00 3.85
893 1664 1.565305 GATTGCTGCTGACTACGAGG 58.435 55.000 0.00 0.00 0.00 4.63
894 1665 1.195347 CGATTGCTGCTGACTACGAG 58.805 55.000 0.00 0.00 0.00 4.18
895 1666 0.526211 ACGATTGCTGCTGACTACGA 59.474 50.000 0.00 0.00 0.00 3.43
898 1669 0.894835 TCCACGATTGCTGCTGACTA 59.105 50.000 0.00 0.00 0.00 2.59
918 1694 3.244561 TGGACAAATGAGGAGGTCTTCAC 60.245 47.826 0.00 0.00 34.73 3.18
947 1723 1.518903 GGGGAAGCGGCTATGCATTC 61.519 60.000 3.54 0.00 37.31 2.67
959 1735 2.904866 TGTTGTGTGCGGGGAAGC 60.905 61.111 0.00 0.00 37.71 3.86
967 1744 1.837538 ATACGTGGCGTGTTGTGTGC 61.838 55.000 0.00 0.00 41.39 4.57
1036 1813 0.801067 ATCCGTCTGCGCGTTTAGAC 60.801 55.000 21.96 21.96 39.86 2.59
1061 1838 1.489560 CGTTCCCCCTTTCTCCACCT 61.490 60.000 0.00 0.00 0.00 4.00
1076 1860 2.665854 TTTCCGCGTTCCCCGTTC 60.666 61.111 4.92 0.00 39.32 3.95
1077 1861 2.667199 CTTTCCGCGTTCCCCGTT 60.667 61.111 4.92 0.00 39.32 4.44
1078 1862 4.692475 CCTTTCCGCGTTCCCCGT 62.692 66.667 4.92 0.00 39.32 5.28
1080 1864 3.339738 ATCCCTTTCCGCGTTCCCC 62.340 63.158 4.92 0.00 0.00 4.81
1081 1865 1.818363 GATCCCTTTCCGCGTTCCC 60.818 63.158 4.92 0.00 0.00 3.97
1082 1866 0.810426 GAGATCCCTTTCCGCGTTCC 60.810 60.000 4.92 0.00 0.00 3.62
1083 1867 1.146358 CGAGATCCCTTTCCGCGTTC 61.146 60.000 4.92 0.00 0.00 3.95
1088 1872 2.279517 CGGCGAGATCCCTTTCCG 60.280 66.667 0.00 0.00 33.59 4.30
1180 1964 1.615814 CCTTCTCCTCTCCCTCGGA 59.384 63.158 0.00 0.00 0.00 4.55
1397 2184 3.160748 GGAGGAGGGAGGCAGAGC 61.161 72.222 0.00 0.00 0.00 4.09
1414 2201 1.800805 ACAGCAAATCGACAGGTGAG 58.199 50.000 16.50 0.00 35.00 3.51
1429 2216 4.397417 AGCATAAATGGAGAACAGAACAGC 59.603 41.667 0.00 0.00 0.00 4.40
1430 2217 6.506500 AAGCATAAATGGAGAACAGAACAG 57.493 37.500 0.00 0.00 0.00 3.16
1456 2244 9.936759 CAATAAAACACTACAATTACCCCAATT 57.063 29.630 0.00 0.00 37.32 2.32
1460 2248 6.031471 CGCAATAAAACACTACAATTACCCC 58.969 40.000 0.00 0.00 0.00 4.95
1465 2253 8.458843 AGCTATTCGCAATAAAACACTACAATT 58.541 29.630 0.00 0.00 42.61 2.32
1466 2254 7.910162 CAGCTATTCGCAATAAAACACTACAAT 59.090 33.333 0.00 0.00 42.61 2.71
1467 2255 7.094975 ACAGCTATTCGCAATAAAACACTACAA 60.095 33.333 0.00 0.00 42.61 2.41
1468 2256 6.370442 ACAGCTATTCGCAATAAAACACTACA 59.630 34.615 0.00 0.00 42.61 2.74
1469 2257 6.772078 ACAGCTATTCGCAATAAAACACTAC 58.228 36.000 0.00 0.00 42.61 2.73
1470 2258 6.237728 CGACAGCTATTCGCAATAAAACACTA 60.238 38.462 4.13 0.00 42.61 2.74
1486 2308 0.753262 AATCCTTCCGCGACAGCTAT 59.247 50.000 8.23 0.00 42.32 2.97
1489 2311 1.019278 TCAAATCCTTCCGCGACAGC 61.019 55.000 8.23 0.00 40.74 4.40
1490 2312 1.438651 TTCAAATCCTTCCGCGACAG 58.561 50.000 8.23 1.90 0.00 3.51
1623 2451 2.287909 GCACGGTGCTAAAATGTCCAAA 60.288 45.455 25.08 0.00 40.96 3.28
1685 2514 4.627467 TGCACAAAAAGTACGTTGCAAAAT 59.373 33.333 0.00 0.00 0.00 1.82
1691 2520 8.055609 TCATAATTTGCACAAAAAGTACGTTG 57.944 30.769 0.00 0.37 33.56 4.10
1693 2522 9.900710 TTATCATAATTTGCACAAAAAGTACGT 57.099 25.926 0.00 0.00 33.56 3.57
1734 2563 3.393800 CTGTATTCATAGTTCCCCGCAG 58.606 50.000 0.00 0.00 0.00 5.18
1777 2606 5.768980 TCCTTCATCTGATTCAACTCCTT 57.231 39.130 0.00 0.00 0.00 3.36
1825 2654 1.991965 CTGCTTCTTCTTCAGCTCGTC 59.008 52.381 0.00 0.00 36.92 4.20
1826 2655 1.615883 TCTGCTTCTTCTTCAGCTCGT 59.384 47.619 0.00 0.00 36.92 4.18
1827 2656 2.360553 TCTGCTTCTTCTTCAGCTCG 57.639 50.000 0.00 0.00 36.92 5.03
1828 2657 4.314121 TCTTTCTGCTTCTTCTTCAGCTC 58.686 43.478 0.00 0.00 36.92 4.09
1829 2658 4.317488 CTCTTTCTGCTTCTTCTTCAGCT 58.683 43.478 0.00 0.00 36.92 4.24
1830 2659 3.436359 CCTCTTTCTGCTTCTTCTTCAGC 59.564 47.826 0.00 0.00 36.49 4.26
1831 2660 4.892433 TCCTCTTTCTGCTTCTTCTTCAG 58.108 43.478 0.00 0.00 0.00 3.02
1832 2661 4.590647 TCTCCTCTTTCTGCTTCTTCTTCA 59.409 41.667 0.00 0.00 0.00 3.02
1833 2662 5.146010 TCTCCTCTTTCTGCTTCTTCTTC 57.854 43.478 0.00 0.00 0.00 2.87
1834 2663 5.512921 CCTTCTCCTCTTTCTGCTTCTTCTT 60.513 44.000 0.00 0.00 0.00 2.52
1835 2664 4.020307 CCTTCTCCTCTTTCTGCTTCTTCT 60.020 45.833 0.00 0.00 0.00 2.85
1836 2665 4.252878 CCTTCTCCTCTTTCTGCTTCTTC 58.747 47.826 0.00 0.00 0.00 2.87
1837 2666 3.558958 GCCTTCTCCTCTTTCTGCTTCTT 60.559 47.826 0.00 0.00 0.00 2.52
1838 2667 2.027285 GCCTTCTCCTCTTTCTGCTTCT 60.027 50.000 0.00 0.00 0.00 2.85
1839 2668 2.027285 AGCCTTCTCCTCTTTCTGCTTC 60.027 50.000 0.00 0.00 0.00 3.86
1840 2669 1.984424 AGCCTTCTCCTCTTTCTGCTT 59.016 47.619 0.00 0.00 0.00 3.91
1841 2670 1.278699 CAGCCTTCTCCTCTTTCTGCT 59.721 52.381 0.00 0.00 0.00 4.24
1842 2671 1.736612 CAGCCTTCTCCTCTTTCTGC 58.263 55.000 0.00 0.00 0.00 4.26
1863 2692 3.822996 CTGCTTCTTCAGTGCTTTCATG 58.177 45.455 0.00 0.00 0.00 3.07
1896 2725 2.555757 ACAGTTCATTGCAGCCTTCTTC 59.444 45.455 0.00 0.00 0.00 2.87
1908 2737 2.996631 GAGCCATCTCCACAGTTCATT 58.003 47.619 0.00 0.00 33.19 2.57
1965 2794 4.445385 GCAACACAACTCATTTTCATGGAC 59.555 41.667 0.00 0.00 0.00 4.02
2008 2837 1.679680 CATCGCCATTCCTTGCTCAAT 59.320 47.619 0.00 0.00 0.00 2.57
2064 2893 2.282391 ATTGCCGGAGCTGTTGCA 60.282 55.556 5.05 0.00 42.74 4.08
2214 3043 1.134699 TCCGATGAGCATGAACTGTCC 60.135 52.381 0.00 0.00 0.00 4.02
2220 3049 1.137675 CTGGACTCCGATGAGCATGAA 59.862 52.381 0.00 0.00 42.74 2.57
2297 3126 1.375908 GCAGATGGTGTTCGAGGCA 60.376 57.895 0.00 0.00 0.00 4.75
2311 3140 1.032014 GGGAAAACTGTGCTTGCAGA 58.968 50.000 9.75 0.00 39.62 4.26
2343 3172 2.224281 TGCAACGGAGTCTGAGATTTGT 60.224 45.455 5.81 0.00 45.00 2.83
2350 3179 1.112916 TCCAGTGCAACGGAGTCTGA 61.113 55.000 5.81 0.00 45.00 3.27
2472 3301 1.289694 CGCCTTCTTGCATTTGCCA 59.710 52.632 0.00 0.00 41.18 4.92
2542 3371 0.387202 CATTTGCAACCGACCACCAA 59.613 50.000 0.00 0.00 0.00 3.67
2693 3522 0.904649 TCAGTTCATGCCCAGATCGT 59.095 50.000 0.00 0.00 0.00 3.73
2697 3526 2.107366 TCGTATCAGTTCATGCCCAGA 58.893 47.619 0.00 0.00 0.00 3.86
2698 3527 2.602257 TCGTATCAGTTCATGCCCAG 57.398 50.000 0.00 0.00 0.00 4.45
2756 3590 4.508861 GCCAGACAAAACAAGTCGTAGTAA 59.491 41.667 0.00 0.00 40.84 2.24
2927 3761 4.386711 ACTGAAAGAAACCTAAGAACCGG 58.613 43.478 0.00 0.00 37.43 5.28
2946 3780 1.845809 GAGCGGCAGAACCACAACTG 61.846 60.000 1.45 0.00 39.03 3.16
3006 4100 4.201705 GGCCAACATAACATCAAAAATGCG 60.202 41.667 0.00 0.00 0.00 4.73
3013 4107 3.164268 AGCAAGGCCAACATAACATCAA 58.836 40.909 5.01 0.00 0.00 2.57
3033 4127 2.154854 ACAAGACACCACACGATGAG 57.845 50.000 0.00 0.00 0.00 2.90
3035 4129 3.691049 AAAACAAGACACCACACGATG 57.309 42.857 0.00 0.00 0.00 3.84
3151 4245 9.517609 TGCATTTTCATTTTCATTTTCTTTTGG 57.482 25.926 0.00 0.00 0.00 3.28
3190 4284 2.995258 GTTTACTTTCGTGATGGCCGTA 59.005 45.455 0.00 0.00 0.00 4.02
3207 4301 7.149202 AGATATACAATCTTGGGGCTGTTTA 57.851 36.000 0.00 0.00 0.00 2.01
3226 4320 9.944376 ACGATGCCATTAACAAATACTAGATAT 57.056 29.630 0.00 0.00 0.00 1.63
3280 4374 4.887071 TGAGTAAGCAGGTGATGTGTTTTT 59.113 37.500 0.00 0.00 0.00 1.94
3387 4481 7.630082 AGGGAGCTTAGTGATAGAGTAGATAG 58.370 42.308 0.00 0.00 0.00 2.08
3388 4482 7.576978 AGGGAGCTTAGTGATAGAGTAGATA 57.423 40.000 0.00 0.00 0.00 1.98
3389 4483 6.463053 AGGGAGCTTAGTGATAGAGTAGAT 57.537 41.667 0.00 0.00 0.00 1.98
3390 4484 5.915744 AGGGAGCTTAGTGATAGAGTAGA 57.084 43.478 0.00 0.00 0.00 2.59
3391 4485 6.177610 CCTAGGGAGCTTAGTGATAGAGTAG 58.822 48.000 0.00 0.00 0.00 2.57
3392 4486 5.014333 CCCTAGGGAGCTTAGTGATAGAGTA 59.986 48.000 24.99 0.00 37.50 2.59
3393 4487 4.202631 CCCTAGGGAGCTTAGTGATAGAGT 60.203 50.000 24.99 0.00 37.50 3.24
3394 4488 4.202631 ACCCTAGGGAGCTTAGTGATAGAG 60.203 50.000 35.38 1.21 38.96 2.43
3395 4489 3.727923 ACCCTAGGGAGCTTAGTGATAGA 59.272 47.826 35.38 0.00 38.96 1.98
3396 4490 4.120946 ACCCTAGGGAGCTTAGTGATAG 57.879 50.000 35.38 2.34 38.96 2.08
3397 4491 4.223953 CAACCCTAGGGAGCTTAGTGATA 58.776 47.826 35.38 0.00 38.96 2.15
3398 4492 3.041946 CAACCCTAGGGAGCTTAGTGAT 58.958 50.000 35.38 4.38 38.96 3.06
3399 4493 2.467880 CAACCCTAGGGAGCTTAGTGA 58.532 52.381 35.38 0.00 38.96 3.41
3400 4494 1.486726 CCAACCCTAGGGAGCTTAGTG 59.513 57.143 35.38 17.47 38.96 2.74
3401 4495 1.365028 TCCAACCCTAGGGAGCTTAGT 59.635 52.381 35.38 6.95 38.96 2.24
3402 4496 2.043227 CTCCAACCCTAGGGAGCTTAG 58.957 57.143 35.38 18.97 43.80 2.18
3403 4497 2.176247 CTCCAACCCTAGGGAGCTTA 57.824 55.000 35.38 13.82 43.80 3.09
3404 4498 3.013682 CTCCAACCCTAGGGAGCTT 57.986 57.895 35.38 15.80 43.80 3.74
3405 4499 4.818314 CTCCAACCCTAGGGAGCT 57.182 61.111 35.38 15.11 43.80 4.09
3408 4502 2.042261 GGCCTCCAACCCTAGGGA 59.958 66.667 35.38 11.08 38.96 4.20
3409 4503 2.042930 AGGCCTCCAACCCTAGGG 59.957 66.667 27.36 27.36 42.03 3.53
3410 4504 1.003573 AGAGGCCTCCAACCCTAGG 59.996 63.158 29.54 0.06 35.86 3.02
3411 4505 0.325671 TGAGAGGCCTCCAACCCTAG 60.326 60.000 29.54 0.00 38.66 3.02
3412 4506 0.343372 ATGAGAGGCCTCCAACCCTA 59.657 55.000 29.54 8.26 38.66 3.53
3413 4507 0.551131 AATGAGAGGCCTCCAACCCT 60.551 55.000 29.54 9.67 38.66 4.34
3414 4508 0.106967 GAATGAGAGGCCTCCAACCC 60.107 60.000 29.54 12.36 38.66 4.11
3415 4509 0.620556 TGAATGAGAGGCCTCCAACC 59.379 55.000 29.54 19.63 38.66 3.77
3416 4510 2.496899 TTGAATGAGAGGCCTCCAAC 57.503 50.000 29.54 20.18 38.66 3.77
3417 4511 3.359033 CAATTGAATGAGAGGCCTCCAA 58.641 45.455 29.54 23.82 38.66 3.53
3418 4512 2.357465 CCAATTGAATGAGAGGCCTCCA 60.357 50.000 29.54 24.96 38.66 3.86
3419 4513 2.305009 CCAATTGAATGAGAGGCCTCC 58.695 52.381 29.54 20.23 38.66 4.30
3420 4514 2.305009 CCCAATTGAATGAGAGGCCTC 58.695 52.381 26.22 26.22 39.86 4.70
3421 4515 1.063417 CCCCAATTGAATGAGAGGCCT 60.063 52.381 3.86 3.86 0.00 5.19
3422 4516 1.342374 ACCCCAATTGAATGAGAGGCC 60.342 52.381 7.12 0.00 0.00 5.19
3423 4517 2.027385 GACCCCAATTGAATGAGAGGC 58.973 52.381 7.12 0.00 0.00 4.70
3424 4518 3.019564 GTGACCCCAATTGAATGAGAGG 58.980 50.000 7.12 0.00 0.00 3.69
3425 4519 3.019564 GGTGACCCCAATTGAATGAGAG 58.980 50.000 7.12 0.00 0.00 3.20
3426 4520 2.378208 TGGTGACCCCAATTGAATGAGA 59.622 45.455 7.12 0.00 41.50 3.27
3427 4521 2.806434 TGGTGACCCCAATTGAATGAG 58.194 47.619 7.12 0.00 41.50 2.90
3428 4522 2.988636 TGGTGACCCCAATTGAATGA 57.011 45.000 7.12 0.00 41.50 2.57
3437 4531 4.093011 CCAATTCTAAATTGGTGACCCCA 58.907 43.478 18.97 0.00 42.63 4.96
3438 4532 3.450817 CCCAATTCTAAATTGGTGACCCC 59.549 47.826 23.16 0.00 45.32 4.95
3439 4533 4.093743 ACCCAATTCTAAATTGGTGACCC 58.906 43.478 23.16 0.00 45.32 4.46
3440 4534 4.770010 TGACCCAATTCTAAATTGGTGACC 59.230 41.667 23.16 0.00 45.32 4.02
3441 4535 5.336451 GGTGACCCAATTCTAAATTGGTGAC 60.336 44.000 23.16 17.15 45.32 3.67
3442 4536 4.770010 GGTGACCCAATTCTAAATTGGTGA 59.230 41.667 23.16 9.30 45.32 4.02
3443 4537 4.380444 CGGTGACCCAATTCTAAATTGGTG 60.380 45.833 23.16 18.09 45.32 4.17
3444 4538 3.761752 CGGTGACCCAATTCTAAATTGGT 59.238 43.478 23.16 14.64 45.32 3.67
3445 4539 4.013728 TCGGTGACCCAATTCTAAATTGG 58.986 43.478 19.89 19.89 46.11 3.16
3446 4540 5.835113 ATCGGTGACCCAATTCTAAATTG 57.165 39.130 0.00 5.60 0.00 2.32
3447 4541 6.850752 AAATCGGTGACCCAATTCTAAATT 57.149 33.333 0.00 0.00 0.00 1.82
3448 4542 6.435904 TCAAAATCGGTGACCCAATTCTAAAT 59.564 34.615 0.00 0.00 0.00 1.40
3449 4543 5.770663 TCAAAATCGGTGACCCAATTCTAAA 59.229 36.000 0.00 0.00 0.00 1.85
3450 4544 5.182380 GTCAAAATCGGTGACCCAATTCTAA 59.818 40.000 0.00 0.00 39.62 2.10
3451 4545 4.698304 GTCAAAATCGGTGACCCAATTCTA 59.302 41.667 0.00 0.00 39.62 2.10
3452 4546 3.506067 GTCAAAATCGGTGACCCAATTCT 59.494 43.478 0.00 0.00 39.62 2.40
3453 4547 3.833442 GTCAAAATCGGTGACCCAATTC 58.167 45.455 0.00 0.00 39.62 2.17
3454 4548 3.934457 GTCAAAATCGGTGACCCAATT 57.066 42.857 0.00 0.00 39.62 2.32
3460 4554 1.725164 GACTCGGTCAAAATCGGTGAC 59.275 52.381 0.00 0.00 43.87 3.67
3461 4555 1.341852 TGACTCGGTCAAAATCGGTGA 59.658 47.619 4.51 0.00 39.78 4.02
3462 4556 1.790755 TGACTCGGTCAAAATCGGTG 58.209 50.000 4.51 0.00 39.78 4.94
3471 4565 4.950475 AGTGAGAGATTATTGACTCGGTCA 59.050 41.667 3.02 3.02 41.09 4.02
3472 4566 5.066634 TGAGTGAGAGATTATTGACTCGGTC 59.933 44.000 0.00 0.00 38.08 4.79
3473 4567 4.950475 TGAGTGAGAGATTATTGACTCGGT 59.050 41.667 0.00 0.00 38.08 4.69
3474 4568 5.506686 TGAGTGAGAGATTATTGACTCGG 57.493 43.478 0.00 0.00 38.08 4.63
3475 4569 7.920151 AGAATTGAGTGAGAGATTATTGACTCG 59.080 37.037 0.00 0.00 38.08 4.18
3476 4570 9.598517 AAGAATTGAGTGAGAGATTATTGACTC 57.401 33.333 0.00 0.00 0.00 3.36
3477 4571 9.956640 AAAGAATTGAGTGAGAGATTATTGACT 57.043 29.630 0.00 0.00 0.00 3.41
3510 4604 9.591792 GCTCCAAAATAAATAAAAGAGCATTCT 57.408 29.630 0.00 0.00 43.79 2.40
3511 4605 9.591792 AGCTCCAAAATAAATAAAAGAGCATTC 57.408 29.630 10.88 0.00 46.11 2.67
3512 4606 9.591792 GAGCTCCAAAATAAATAAAAGAGCATT 57.408 29.630 0.87 0.00 46.11 3.56
3513 4607 8.975295 AGAGCTCCAAAATAAATAAAAGAGCAT 58.025 29.630 10.93 0.00 46.11 3.79
3514 4608 8.353423 AGAGCTCCAAAATAAATAAAAGAGCA 57.647 30.769 10.93 0.00 46.11 4.26
3515 4609 8.462016 TGAGAGCTCCAAAATAAATAAAAGAGC 58.538 33.333 10.93 0.00 44.49 4.09
3516 4610 9.780413 GTGAGAGCTCCAAAATAAATAAAAGAG 57.220 33.333 10.93 0.00 0.00 2.85
3517 4611 9.295825 TGTGAGAGCTCCAAAATAAATAAAAGA 57.704 29.630 10.93 0.00 0.00 2.52
3521 4615 9.241919 TGAATGTGAGAGCTCCAAAATAAATAA 57.758 29.630 10.93 0.00 0.00 1.40
3522 4616 8.806429 TGAATGTGAGAGCTCCAAAATAAATA 57.194 30.769 10.93 0.00 0.00 1.40
3523 4617 7.707624 TGAATGTGAGAGCTCCAAAATAAAT 57.292 32.000 10.93 0.00 0.00 1.40
3524 4618 7.523293 TTGAATGTGAGAGCTCCAAAATAAA 57.477 32.000 10.93 0.00 0.00 1.40
3525 4619 7.523293 TTTGAATGTGAGAGCTCCAAAATAA 57.477 32.000 10.93 0.00 0.00 1.40
3526 4620 7.148018 GGATTTGAATGTGAGAGCTCCAAAATA 60.148 37.037 10.93 0.00 0.00 1.40
3527 4621 6.350780 GGATTTGAATGTGAGAGCTCCAAAAT 60.351 38.462 10.93 10.03 0.00 1.82
3528 4622 5.047802 GGATTTGAATGTGAGAGCTCCAAAA 60.048 40.000 10.93 5.90 0.00 2.44
3529 4623 4.460382 GGATTTGAATGTGAGAGCTCCAAA 59.540 41.667 10.93 11.87 0.00 3.28
3530 4624 4.012374 GGATTTGAATGTGAGAGCTCCAA 58.988 43.478 10.93 2.47 0.00 3.53
3531 4625 3.614092 GGATTTGAATGTGAGAGCTCCA 58.386 45.455 10.93 5.38 0.00 3.86
3532 4626 2.611292 CGGATTTGAATGTGAGAGCTCC 59.389 50.000 10.93 2.40 0.00 4.70
3533 4627 3.525537 TCGGATTTGAATGTGAGAGCTC 58.474 45.455 5.27 5.27 0.00 4.09
3534 4628 3.616956 TCGGATTTGAATGTGAGAGCT 57.383 42.857 0.00 0.00 0.00 4.09
3535 4629 3.686726 ACTTCGGATTTGAATGTGAGAGC 59.313 43.478 0.00 0.00 0.00 4.09
3536 4630 5.409520 TGAACTTCGGATTTGAATGTGAGAG 59.590 40.000 0.00 0.00 0.00 3.20
3537 4631 5.304778 TGAACTTCGGATTTGAATGTGAGA 58.695 37.500 0.00 0.00 0.00 3.27
3538 4632 5.180117 ACTGAACTTCGGATTTGAATGTGAG 59.820 40.000 4.52 0.00 0.00 3.51
3539 4633 5.063204 ACTGAACTTCGGATTTGAATGTGA 58.937 37.500 4.52 0.00 0.00 3.58
3540 4634 5.362556 ACTGAACTTCGGATTTGAATGTG 57.637 39.130 4.52 0.00 0.00 3.21
3541 4635 7.390440 TCAATACTGAACTTCGGATTTGAATGT 59.610 33.333 4.52 0.00 30.45 2.71
3542 4636 7.751732 TCAATACTGAACTTCGGATTTGAATG 58.248 34.615 4.52 0.00 30.45 2.67
3543 4637 7.921786 TCAATACTGAACTTCGGATTTGAAT 57.078 32.000 4.52 0.00 30.45 2.57
3544 4638 7.737972 TTCAATACTGAACTTCGGATTTGAA 57.262 32.000 18.52 18.52 36.62 2.69
3545 4639 7.921786 ATTCAATACTGAACTTCGGATTTGA 57.078 32.000 4.52 9.40 44.28 2.69
3546 4640 8.853345 CAAATTCAATACTGAACTTCGGATTTG 58.147 33.333 4.52 7.52 44.28 2.32
3547 4641 8.028938 CCAAATTCAATACTGAACTTCGGATTT 58.971 33.333 4.52 0.00 44.28 2.17
3548 4642 7.362920 CCCAAATTCAATACTGAACTTCGGATT 60.363 37.037 4.52 0.00 44.28 3.01
3549 4643 6.095440 CCCAAATTCAATACTGAACTTCGGAT 59.905 38.462 4.52 0.00 44.28 4.18
3550 4644 5.414454 CCCAAATTCAATACTGAACTTCGGA 59.586 40.000 4.52 0.00 44.28 4.55
3551 4645 5.183140 ACCCAAATTCAATACTGAACTTCGG 59.817 40.000 0.00 0.00 44.28 4.30
3552 4646 6.072728 TGACCCAAATTCAATACTGAACTTCG 60.073 38.462 0.00 0.00 44.28 3.79
3553 4647 7.214467 TGACCCAAATTCAATACTGAACTTC 57.786 36.000 0.00 0.00 44.28 3.01
3554 4648 7.451255 TCATGACCCAAATTCAATACTGAACTT 59.549 33.333 0.00 0.00 44.28 2.66
3555 4649 6.947733 TCATGACCCAAATTCAATACTGAACT 59.052 34.615 0.00 0.00 44.28 3.01
3556 4650 7.156876 TCATGACCCAAATTCAATACTGAAC 57.843 36.000 0.00 0.00 44.28 3.18
3557 4651 7.959658 ATCATGACCCAAATTCAATACTGAA 57.040 32.000 0.00 0.00 45.53 3.02
3558 4652 7.959658 AATCATGACCCAAATTCAATACTGA 57.040 32.000 0.00 0.00 0.00 3.41
3559 4653 8.875803 CAAAATCATGACCCAAATTCAATACTG 58.124 33.333 0.00 0.00 0.00 2.74
3560 4654 8.814931 TCAAAATCATGACCCAAATTCAATACT 58.185 29.630 0.00 0.00 0.00 2.12
3561 4655 8.872845 GTCAAAATCATGACCCAAATTCAATAC 58.127 33.333 0.00 0.00 43.11 1.89
3563 4657 7.910441 GTCAAAATCATGACCCAAATTCAAT 57.090 32.000 0.00 0.00 43.11 2.57
3601 4695 8.127954 GCCAGTTTGCTTTTGATTGATTTAAAA 58.872 29.630 0.00 0.00 0.00 1.52
3602 4696 7.255070 GGCCAGTTTGCTTTTGATTGATTTAAA 60.255 33.333 0.00 0.00 0.00 1.52
3603 4697 6.204495 GGCCAGTTTGCTTTTGATTGATTTAA 59.796 34.615 0.00 0.00 0.00 1.52
3604 4698 5.700373 GGCCAGTTTGCTTTTGATTGATTTA 59.300 36.000 0.00 0.00 0.00 1.40
3605 4699 4.516321 GGCCAGTTTGCTTTTGATTGATTT 59.484 37.500 0.00 0.00 0.00 2.17
3606 4700 4.067192 GGCCAGTTTGCTTTTGATTGATT 58.933 39.130 0.00 0.00 0.00 2.57
3607 4701 3.325716 AGGCCAGTTTGCTTTTGATTGAT 59.674 39.130 5.01 0.00 0.00 2.57
3608 4702 2.699846 AGGCCAGTTTGCTTTTGATTGA 59.300 40.909 5.01 0.00 0.00 2.57
3609 4703 3.116079 AGGCCAGTTTGCTTTTGATTG 57.884 42.857 5.01 0.00 0.00 2.67
3610 4704 6.603940 TTATAGGCCAGTTTGCTTTTGATT 57.396 33.333 5.01 0.00 0.00 2.57
3611 4705 6.603940 TTTATAGGCCAGTTTGCTTTTGAT 57.396 33.333 5.01 0.00 0.00 2.57
3612 4706 6.220201 GTTTTATAGGCCAGTTTGCTTTTGA 58.780 36.000 5.01 0.00 0.00 2.69
3613 4707 5.408299 GGTTTTATAGGCCAGTTTGCTTTTG 59.592 40.000 5.01 0.00 0.00 2.44
3614 4708 5.071115 TGGTTTTATAGGCCAGTTTGCTTTT 59.929 36.000 5.01 0.00 0.00 2.27
3615 4709 4.591072 TGGTTTTATAGGCCAGTTTGCTTT 59.409 37.500 5.01 0.00 0.00 3.51
3616 4710 4.156477 TGGTTTTATAGGCCAGTTTGCTT 58.844 39.130 5.01 0.00 0.00 3.91
3617 4711 3.773560 TGGTTTTATAGGCCAGTTTGCT 58.226 40.909 5.01 0.00 0.00 3.91
3618 4712 4.736126 ATGGTTTTATAGGCCAGTTTGC 57.264 40.909 5.01 0.00 35.56 3.68
3619 4713 7.581213 TGATATGGTTTTATAGGCCAGTTTG 57.419 36.000 5.01 0.00 35.56 2.93
3620 4714 8.782137 ATTGATATGGTTTTATAGGCCAGTTT 57.218 30.769 5.01 0.00 35.56 2.66
3621 4715 7.451566 GGATTGATATGGTTTTATAGGCCAGTT 59.548 37.037 5.01 0.00 35.56 3.16
3622 4716 6.948309 GGATTGATATGGTTTTATAGGCCAGT 59.052 38.462 5.01 0.00 35.56 4.00
3623 4717 6.378280 GGGATTGATATGGTTTTATAGGCCAG 59.622 42.308 5.01 0.00 35.56 4.85
3624 4718 6.252995 GGGATTGATATGGTTTTATAGGCCA 58.747 40.000 5.01 0.00 36.64 5.36
3625 4719 5.357032 CGGGATTGATATGGTTTTATAGGCC 59.643 44.000 0.00 0.00 0.00 5.19
3626 4720 5.944007 ACGGGATTGATATGGTTTTATAGGC 59.056 40.000 0.00 0.00 0.00 3.93
3627 4721 6.128007 GCACGGGATTGATATGGTTTTATAGG 60.128 42.308 0.00 0.00 0.00 2.57
3628 4722 6.429692 TGCACGGGATTGATATGGTTTTATAG 59.570 38.462 0.00 0.00 0.00 1.31
3629 4723 6.205853 GTGCACGGGATTGATATGGTTTTATA 59.794 38.462 0.00 0.00 0.00 0.98
3630 4724 5.009610 GTGCACGGGATTGATATGGTTTTAT 59.990 40.000 0.00 0.00 0.00 1.40
3631 4725 4.336993 GTGCACGGGATTGATATGGTTTTA 59.663 41.667 0.00 0.00 0.00 1.52
3632 4726 3.130340 GTGCACGGGATTGATATGGTTTT 59.870 43.478 0.00 0.00 0.00 2.43
3633 4727 2.687935 GTGCACGGGATTGATATGGTTT 59.312 45.455 0.00 0.00 0.00 3.27
3634 4728 2.297701 GTGCACGGGATTGATATGGTT 58.702 47.619 0.00 0.00 0.00 3.67
3635 4729 1.476833 GGTGCACGGGATTGATATGGT 60.477 52.381 11.45 0.00 0.00 3.55
3636 4730 1.238439 GGTGCACGGGATTGATATGG 58.762 55.000 11.45 0.00 0.00 2.74
3637 4731 1.238439 GGGTGCACGGGATTGATATG 58.762 55.000 11.45 0.00 0.00 1.78
3638 4732 0.250295 CGGGTGCACGGGATTGATAT 60.250 55.000 11.45 0.00 0.00 1.63
3639 4733 1.145156 CGGGTGCACGGGATTGATA 59.855 57.895 11.45 0.00 0.00 2.15
3640 4734 2.124736 CGGGTGCACGGGATTGAT 60.125 61.111 11.45 0.00 0.00 2.57
3651 4745 0.391130 TGTCTAAGTGATGCGGGTGC 60.391 55.000 0.00 0.00 43.20 5.01
3652 4746 2.093306 TTGTCTAAGTGATGCGGGTG 57.907 50.000 0.00 0.00 0.00 4.61
3653 4747 2.851263 TTTGTCTAAGTGATGCGGGT 57.149 45.000 0.00 0.00 0.00 5.28
3654 4748 3.334691 TCTTTTGTCTAAGTGATGCGGG 58.665 45.455 0.00 0.00 0.00 6.13
3655 4749 4.670221 GCTTCTTTTGTCTAAGTGATGCGG 60.670 45.833 0.00 0.00 0.00 5.69
3656 4750 4.398247 GCTTCTTTTGTCTAAGTGATGCG 58.602 43.478 0.00 0.00 0.00 4.73
3657 4751 4.398247 CGCTTCTTTTGTCTAAGTGATGC 58.602 43.478 0.00 0.00 33.57 3.91
3658 4752 4.398247 GCGCTTCTTTTGTCTAAGTGATG 58.602 43.478 0.00 0.00 33.57 3.07
3659 4753 3.437049 GGCGCTTCTTTTGTCTAAGTGAT 59.563 43.478 7.64 0.00 33.57 3.06
3660 4754 2.806244 GGCGCTTCTTTTGTCTAAGTGA 59.194 45.455 7.64 0.00 33.57 3.41
3661 4755 2.548057 TGGCGCTTCTTTTGTCTAAGTG 59.452 45.455 7.64 0.00 34.60 3.16
3662 4756 2.846193 TGGCGCTTCTTTTGTCTAAGT 58.154 42.857 7.64 0.00 0.00 2.24
3663 4757 3.003275 TGTTGGCGCTTCTTTTGTCTAAG 59.997 43.478 7.64 0.00 0.00 2.18
3664 4758 2.946329 TGTTGGCGCTTCTTTTGTCTAA 59.054 40.909 7.64 0.00 0.00 2.10
3665 4759 2.566913 TGTTGGCGCTTCTTTTGTCTA 58.433 42.857 7.64 0.00 0.00 2.59
3666 4760 1.388547 TGTTGGCGCTTCTTTTGTCT 58.611 45.000 7.64 0.00 0.00 3.41
3667 4761 2.053627 CATGTTGGCGCTTCTTTTGTC 58.946 47.619 7.64 0.00 0.00 3.18
3668 4762 1.408702 ACATGTTGGCGCTTCTTTTGT 59.591 42.857 7.64 1.83 0.00 2.83
3669 4763 1.788308 CACATGTTGGCGCTTCTTTTG 59.212 47.619 7.64 1.14 0.00 2.44
3670 4764 1.680735 TCACATGTTGGCGCTTCTTTT 59.319 42.857 7.64 0.00 0.00 2.27
3671 4765 1.317613 TCACATGTTGGCGCTTCTTT 58.682 45.000 7.64 0.00 0.00 2.52
3672 4766 1.538047 ATCACATGTTGGCGCTTCTT 58.462 45.000 7.64 0.00 0.00 2.52
3673 4767 2.009774 GTATCACATGTTGGCGCTTCT 58.990 47.619 7.64 0.00 0.00 2.85
3674 4768 2.009774 AGTATCACATGTTGGCGCTTC 58.990 47.619 7.64 0.00 0.00 3.86
3675 4769 2.113860 AGTATCACATGTTGGCGCTT 57.886 45.000 7.64 0.00 0.00 4.68
3676 4770 2.113860 AAGTATCACATGTTGGCGCT 57.886 45.000 7.64 0.00 0.00 5.92
3677 4771 2.919666 AAAGTATCACATGTTGGCGC 57.080 45.000 0.00 0.00 0.00 6.53
3678 4772 3.373748 TGCTAAAGTATCACATGTTGGCG 59.626 43.478 0.00 0.00 0.00 5.69
3679 4773 4.438744 GGTGCTAAAGTATCACATGTTGGC 60.439 45.833 0.00 0.00 32.69 4.52
3680 4774 4.699735 TGGTGCTAAAGTATCACATGTTGG 59.300 41.667 0.00 0.00 32.69 3.77
3681 4775 5.878332 TGGTGCTAAAGTATCACATGTTG 57.122 39.130 0.00 0.00 32.69 3.33
3682 4776 8.752005 ATATTGGTGCTAAAGTATCACATGTT 57.248 30.769 0.00 0.00 32.69 2.71
3683 4777 9.494271 CTATATTGGTGCTAAAGTATCACATGT 57.506 33.333 0.00 0.00 32.69 3.21
3684 4778 9.494271 ACTATATTGGTGCTAAAGTATCACATG 57.506 33.333 0.00 0.00 32.69 3.21
3692 4786 9.658799 CAGCATATACTATATTGGTGCTAAAGT 57.341 33.333 0.00 0.00 39.22 2.66
3699 4793 7.049754 TGATGGCAGCATATACTATATTGGTG 58.950 38.462 0.00 0.00 39.81 4.17
3700 4794 7.199167 TGATGGCAGCATATACTATATTGGT 57.801 36.000 0.00 0.00 0.00 3.67
3701 4795 7.254556 CGTTGATGGCAGCATATACTATATTGG 60.255 40.741 6.15 0.00 0.00 3.16
3702 4796 7.624661 CGTTGATGGCAGCATATACTATATTG 58.375 38.462 6.15 0.00 0.00 1.90
3703 4797 6.258727 GCGTTGATGGCAGCATATACTATATT 59.741 38.462 6.15 0.00 0.00 1.28
3704 4798 5.755375 GCGTTGATGGCAGCATATACTATAT 59.245 40.000 6.15 0.00 0.00 0.86
3705 4799 5.109210 GCGTTGATGGCAGCATATACTATA 58.891 41.667 6.15 0.00 0.00 1.31
3706 4800 3.935203 GCGTTGATGGCAGCATATACTAT 59.065 43.478 6.15 0.00 0.00 2.12
3707 4801 3.244044 TGCGTTGATGGCAGCATATACTA 60.244 43.478 6.15 0.00 35.04 1.82
3708 4802 2.146342 GCGTTGATGGCAGCATATACT 58.854 47.619 6.15 0.00 0.00 2.12
3709 4803 1.872952 TGCGTTGATGGCAGCATATAC 59.127 47.619 6.15 0.36 35.04 1.47
3710 4804 2.252976 TGCGTTGATGGCAGCATATA 57.747 45.000 6.15 0.00 35.04 0.86
3711 4805 3.099002 TGCGTTGATGGCAGCATAT 57.901 47.368 6.15 0.00 35.04 1.78
3712 4806 4.633769 TGCGTTGATGGCAGCATA 57.366 50.000 6.15 0.00 35.04 3.14
3717 4811 3.005684 AGAAATTTTCTGCGTTGATGGCA 59.994 39.130 10.82 0.00 38.91 4.92
3718 4812 3.578688 AGAAATTTTCTGCGTTGATGGC 58.421 40.909 10.82 0.00 38.91 4.40
3719 4813 4.168760 GGAGAAATTTTCTGCGTTGATGG 58.831 43.478 16.17 0.00 40.87 3.51
3727 4821 7.025963 CAGACTTATGTGGAGAAATTTTCTGC 58.974 38.462 20.15 20.15 46.90 4.26
3728 4822 8.327941 TCAGACTTATGTGGAGAAATTTTCTG 57.672 34.615 16.17 2.39 40.87 3.02
3729 4823 8.160106 ACTCAGACTTATGTGGAGAAATTTTCT 58.840 33.333 11.40 11.40 44.21 2.52
3730 4824 8.329203 ACTCAGACTTATGTGGAGAAATTTTC 57.671 34.615 11.70 0.66 32.07 2.29
3731 4825 8.571336 CAACTCAGACTTATGTGGAGAAATTTT 58.429 33.333 11.70 0.00 32.07 1.82
3732 4826 7.939039 TCAACTCAGACTTATGTGGAGAAATTT 59.061 33.333 11.70 0.00 32.07 1.82
3733 4827 7.453393 TCAACTCAGACTTATGTGGAGAAATT 58.547 34.615 11.70 0.00 32.07 1.82
3734 4828 7.009179 TCAACTCAGACTTATGTGGAGAAAT 57.991 36.000 11.70 0.00 32.07 2.17
3735 4829 6.419484 TCAACTCAGACTTATGTGGAGAAA 57.581 37.500 11.70 0.00 32.07 2.52
3736 4830 6.611613 ATCAACTCAGACTTATGTGGAGAA 57.388 37.500 11.70 1.73 32.07 2.87
3737 4831 6.611613 AATCAACTCAGACTTATGTGGAGA 57.388 37.500 11.70 0.00 32.07 3.71
3738 4832 8.037758 AGTTAATCAACTCAGACTTATGTGGAG 58.962 37.037 5.82 5.82 41.25 3.86
3739 4833 7.819415 CAGTTAATCAACTCAGACTTATGTGGA 59.181 37.037 0.00 0.00 43.30 4.02
3740 4834 7.819415 TCAGTTAATCAACTCAGACTTATGTGG 59.181 37.037 0.00 0.00 43.30 4.17
3741 4835 8.651588 GTCAGTTAATCAACTCAGACTTATGTG 58.348 37.037 0.00 0.00 43.30 3.21
3742 4836 8.367911 TGTCAGTTAATCAACTCAGACTTATGT 58.632 33.333 2.00 0.00 43.30 2.29
3743 4837 8.763049 TGTCAGTTAATCAACTCAGACTTATG 57.237 34.615 2.00 0.00 43.30 1.90
3744 4838 9.429359 CTTGTCAGTTAATCAACTCAGACTTAT 57.571 33.333 2.00 0.00 43.30 1.73
3745 4839 8.638873 TCTTGTCAGTTAATCAACTCAGACTTA 58.361 33.333 2.00 0.00 43.30 2.24
3746 4840 7.439655 GTCTTGTCAGTTAATCAACTCAGACTT 59.560 37.037 2.00 0.00 43.30 3.01
3747 4841 6.926272 GTCTTGTCAGTTAATCAACTCAGACT 59.074 38.462 2.00 0.00 43.30 3.24
3748 4842 6.701841 TGTCTTGTCAGTTAATCAACTCAGAC 59.298 38.462 0.00 0.00 43.30 3.51
3749 4843 6.816136 TGTCTTGTCAGTTAATCAACTCAGA 58.184 36.000 0.00 0.00 43.30 3.27
3750 4844 7.482654 TTGTCTTGTCAGTTAATCAACTCAG 57.517 36.000 0.00 0.00 43.30 3.35
3751 4845 7.857734 TTTGTCTTGTCAGTTAATCAACTCA 57.142 32.000 0.00 0.00 43.30 3.41
3752 4846 9.387123 GATTTTGTCTTGTCAGTTAATCAACTC 57.613 33.333 0.00 0.00 43.30 3.01
3753 4847 8.902806 TGATTTTGTCTTGTCAGTTAATCAACT 58.097 29.630 0.00 0.00 46.15 3.16
3754 4848 8.958043 GTGATTTTGTCTTGTCAGTTAATCAAC 58.042 33.333 0.00 0.00 33.92 3.18
3755 4849 8.681806 TGTGATTTTGTCTTGTCAGTTAATCAA 58.318 29.630 0.00 0.00 33.92 2.57
3756 4850 8.128582 GTGTGATTTTGTCTTGTCAGTTAATCA 58.871 33.333 0.00 0.00 0.00 2.57
3757 4851 7.591426 GGTGTGATTTTGTCTTGTCAGTTAATC 59.409 37.037 0.00 0.00 0.00 1.75
3758 4852 7.068103 TGGTGTGATTTTGTCTTGTCAGTTAAT 59.932 33.333 0.00 0.00 0.00 1.40
3759 4853 6.375736 TGGTGTGATTTTGTCTTGTCAGTTAA 59.624 34.615 0.00 0.00 0.00 2.01
3760 4854 5.883115 TGGTGTGATTTTGTCTTGTCAGTTA 59.117 36.000 0.00 0.00 0.00 2.24
3761 4855 4.704540 TGGTGTGATTTTGTCTTGTCAGTT 59.295 37.500 0.00 0.00 0.00 3.16
3762 4856 4.096382 GTGGTGTGATTTTGTCTTGTCAGT 59.904 41.667 0.00 0.00 0.00 3.41
3763 4857 4.096231 TGTGGTGTGATTTTGTCTTGTCAG 59.904 41.667 0.00 0.00 0.00 3.51
3764 4858 4.013050 TGTGGTGTGATTTTGTCTTGTCA 58.987 39.130 0.00 0.00 0.00 3.58
3765 4859 4.630894 TGTGGTGTGATTTTGTCTTGTC 57.369 40.909 0.00 0.00 0.00 3.18
3766 4860 5.398603 TTTGTGGTGTGATTTTGTCTTGT 57.601 34.783 0.00 0.00 0.00 3.16
3767 4861 5.291614 CCTTTTGTGGTGTGATTTTGTCTTG 59.708 40.000 0.00 0.00 0.00 3.02
3768 4862 5.418676 CCTTTTGTGGTGTGATTTTGTCTT 58.581 37.500 0.00 0.00 0.00 3.01
3769 4863 4.680440 GCCTTTTGTGGTGTGATTTTGTCT 60.680 41.667 0.00 0.00 0.00 3.41
3770 4864 3.555547 GCCTTTTGTGGTGTGATTTTGTC 59.444 43.478 0.00 0.00 0.00 3.18
3771 4865 3.530535 GCCTTTTGTGGTGTGATTTTGT 58.469 40.909 0.00 0.00 0.00 2.83
3772 4866 2.871633 GGCCTTTTGTGGTGTGATTTTG 59.128 45.455 0.00 0.00 0.00 2.44
3773 4867 2.158827 GGGCCTTTTGTGGTGTGATTTT 60.159 45.455 0.84 0.00 0.00 1.82
3774 4868 1.416030 GGGCCTTTTGTGGTGTGATTT 59.584 47.619 0.84 0.00 0.00 2.17
3775 4869 1.047801 GGGCCTTTTGTGGTGTGATT 58.952 50.000 0.84 0.00 0.00 2.57
3776 4870 0.105760 TGGGCCTTTTGTGGTGTGAT 60.106 50.000 4.53 0.00 0.00 3.06
3777 4871 0.105760 ATGGGCCTTTTGTGGTGTGA 60.106 50.000 4.53 0.00 0.00 3.58
3778 4872 0.318120 GATGGGCCTTTTGTGGTGTG 59.682 55.000 4.53 0.00 0.00 3.82
3779 4873 0.105760 TGATGGGCCTTTTGTGGTGT 60.106 50.000 4.53 0.00 0.00 4.16
3780 4874 1.047002 TTGATGGGCCTTTTGTGGTG 58.953 50.000 4.53 0.00 0.00 4.17
3781 4875 1.799933 TTTGATGGGCCTTTTGTGGT 58.200 45.000 4.53 0.00 0.00 4.16
3782 4876 2.158842 TGTTTTGATGGGCCTTTTGTGG 60.159 45.455 4.53 0.00 0.00 4.17
3783 4877 2.871633 GTGTTTTGATGGGCCTTTTGTG 59.128 45.455 4.53 0.00 0.00 3.33
3784 4878 2.158827 GGTGTTTTGATGGGCCTTTTGT 60.159 45.455 4.53 0.00 0.00 2.83
3785 4879 2.493035 GGTGTTTTGATGGGCCTTTTG 58.507 47.619 4.53 0.00 0.00 2.44
3786 4880 1.069978 CGGTGTTTTGATGGGCCTTTT 59.930 47.619 4.53 0.00 0.00 2.27
3787 4881 0.678950 CGGTGTTTTGATGGGCCTTT 59.321 50.000 4.53 0.00 0.00 3.11
3788 4882 1.815817 GCGGTGTTTTGATGGGCCTT 61.816 55.000 4.53 0.00 0.00 4.35
3789 4883 2.275380 GCGGTGTTTTGATGGGCCT 61.275 57.895 4.53 0.00 0.00 5.19
3790 4884 1.887344 ATGCGGTGTTTTGATGGGCC 61.887 55.000 0.00 0.00 0.00 5.80
3791 4885 0.037419 AATGCGGTGTTTTGATGGGC 60.037 50.000 0.00 0.00 0.00 5.36
3792 4886 3.799281 ATAATGCGGTGTTTTGATGGG 57.201 42.857 0.00 0.00 0.00 4.00
3793 4887 6.070897 TCATATAATGCGGTGTTTTGATGG 57.929 37.500 0.00 0.00 0.00 3.51
3794 4888 9.676195 TTATTCATATAATGCGGTGTTTTGATG 57.324 29.630 0.00 0.00 0.00 3.07
3800 4894 9.730420 GTTCTTTTATTCATATAATGCGGTGTT 57.270 29.630 0.00 0.00 0.00 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.