Multiple sequence alignment - TraesCS1D01G081300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G081300 chr1D 100.000 3173 0 0 1 3173 63606612 63609784 0.000000e+00 5860.0
1 TraesCS1D01G081300 chr1D 82.264 265 34 12 130 384 423854087 423854348 1.920000e-52 217.0
2 TraesCS1D01G081300 chr1B 95.697 2417 84 15 724 3134 104347872 104350274 0.000000e+00 3869.0
3 TraesCS1D01G081300 chr1B 80.184 217 35 3 300 515 668802674 668802883 4.240000e-34 156.0
4 TraesCS1D01G081300 chr1A 95.680 1898 77 4 738 2634 62575440 62577333 0.000000e+00 3046.0
5 TraesCS1D01G081300 chr1A 94.366 497 23 3 2639 3134 62577393 62577885 0.000000e+00 758.0
6 TraesCS1D01G081300 chr1A 87.429 175 21 1 555 728 366818430 366818256 1.930000e-47 200.0
7 TraesCS1D01G081300 chr1A 82.963 135 15 8 193 322 449810940 449811071 7.190000e-22 115.0
8 TraesCS1D01G081300 chr5D 84.351 262 34 5 2485 2744 315935973 315936229 1.890000e-62 250.0
9 TraesCS1D01G081300 chr2B 77.904 439 70 15 126 551 549358230 549357806 6.800000e-62 248.0
10 TraesCS1D01G081300 chr2B 81.223 229 35 4 2518 2744 226699488 226699266 9.040000e-41 178.0
11 TraesCS1D01G081300 chr2B 91.026 78 7 0 1 78 256948546 256948469 4.330000e-19 106.0
12 TraesCS1D01G081300 chr2B 87.097 93 11 1 23 114 619430268 619430360 1.560000e-18 104.0
13 TraesCS1D01G081300 chr3D 82.867 286 25 11 120 384 532234886 532234604 5.290000e-58 235.0
14 TraesCS1D01G081300 chr3D 80.934 257 43 4 2489 2744 558290549 558290298 6.940000e-47 198.0
15 TraesCS1D01G081300 chr3D 80.287 279 31 13 239 514 57412503 57412760 4.180000e-44 189.0
16 TraesCS1D01G081300 chr3D 86.747 83 10 1 1 83 583475325 583475406 1.210000e-14 91.6
17 TraesCS1D01G081300 chr3B 82.918 281 26 13 120 382 43853433 43853157 1.900000e-57 233.0
18 TraesCS1D01G081300 chr3B 77.744 328 50 15 228 551 242149610 242149918 2.510000e-41 180.0
19 TraesCS1D01G081300 chr3B 86.667 75 10 0 1 75 242137464 242137538 2.030000e-12 84.2
20 TraesCS1D01G081300 chr3A 79.448 326 55 10 91 409 495386805 495387125 1.480000e-53 220.0
21 TraesCS1D01G081300 chr3A 81.272 283 26 8 120 379 667495930 667495652 1.490000e-48 204.0
22 TraesCS1D01G081300 chr3A 79.775 178 32 3 555 731 383854719 383854893 3.320000e-25 126.0
23 TraesCS1D01G081300 chr3A 78.571 168 23 11 185 342 19348929 19348765 7.240000e-17 99.0
24 TraesCS1D01G081300 chr4D 82.661 248 40 2 2483 2730 373205847 373205603 1.920000e-52 217.0
25 TraesCS1D01G081300 chr4D 77.218 417 54 24 1 384 478034892 478034484 4.150000e-49 206.0
26 TraesCS1D01G081300 chr4B 78.788 330 53 9 228 551 117101723 117102041 4.150000e-49 206.0
27 TraesCS1D01G081300 chr7B 87.898 157 18 1 555 710 646484452 646484608 1.940000e-42 183.0
28 TraesCS1D01G081300 chr2A 80.786 229 38 6 2483 2710 743564759 743564982 1.170000e-39 174.0
29 TraesCS1D01G081300 chr2A 74.522 314 53 20 255 551 200055675 200055978 9.300000e-21 111.0
30 TraesCS1D01G081300 chr2D 82.673 202 27 8 2485 2682 611225013 611225210 4.210000e-39 172.0
31 TraesCS1D01G081300 chr5B 77.736 265 54 5 2483 2747 328374009 328373750 1.180000e-34 158.0
32 TraesCS1D01G081300 chr5A 92.035 113 8 1 3 114 407932338 407932450 1.180000e-34 158.0
33 TraesCS1D01G081300 chr6D 76.632 291 49 15 229 512 345788186 345788464 3.300000e-30 143.0
34 TraesCS1D01G081300 chr6B 78.788 231 27 17 120 346 508936785 508936997 5.520000e-28 135.0
35 TraesCS1D01G081300 chr6B 77.391 115 25 1 399 512 689949378 689949264 2.040000e-07 67.6
36 TraesCS1D01G081300 chr4A 86.992 123 11 4 1 118 485290320 485290198 1.990000e-27 134.0
37 TraesCS1D01G081300 chr4A 81.513 119 20 2 395 512 85573709 85573592 2.610000e-16 97.1
38 TraesCS1D01G081300 chr4A 87.013 77 10 0 2 78 488245164 488245088 1.570000e-13 87.9
39 TraesCS1D01G081300 chr6A 74.169 391 63 24 185 549 20833219 20833597 9.240000e-26 128.0
40 TraesCS1D01G081300 chr7A 74.204 314 46 22 222 512 105316528 105316227 7.240000e-17 99.0
41 TraesCS1D01G081300 chr7D 88.608 79 9 0 1 79 121757787 121757865 2.610000e-16 97.1
42 TraesCS1D01G081300 chr7D 88.462 78 9 0 1 78 108989889 108989966 9.370000e-16 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G081300 chr1D 63606612 63609784 3172 False 5860 5860 100.000 1 3173 1 chr1D.!!$F1 3172
1 TraesCS1D01G081300 chr1B 104347872 104350274 2402 False 3869 3869 95.697 724 3134 1 chr1B.!!$F1 2410
2 TraesCS1D01G081300 chr1A 62575440 62577885 2445 False 1902 3046 95.023 738 3134 2 chr1A.!!$F2 2396

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
290 291 0.028505 CTTCGCATTGATTCCCGCAG 59.971 55.0 0.00 0.00 0.00 5.18 F
380 381 0.031585 AAAAAGTTTTCCTCGGCGCC 59.968 50.0 19.07 19.07 0.00 6.53 F
502 503 0.179111 GGCCTATTTTTCAAGCCGGC 60.179 55.0 21.89 21.89 33.18 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1662 1665 0.909610 AGCTCACCGGAAATGGGAGA 60.910 55.000 9.46 0.0 31.65 3.71 R
2031 2034 2.357009 CCTGATAGCAACAAGTGGATGC 59.643 50.000 0.00 0.0 40.34 3.91 R
2352 2355 4.774726 AGAGAGCTGTGTAAAGATCTTGGA 59.225 41.667 9.17 0.0 42.82 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.808649 CTCGTAAAGGAGACGGGC 57.191 61.111 0.00 0.00 40.70 6.13
21 22 1.141234 CTCGTAAAGGAGACGGGCC 59.859 63.158 0.00 0.00 40.70 5.80
22 23 1.304713 TCGTAAAGGAGACGGGCCT 60.305 57.895 0.84 0.00 40.70 5.19
23 24 1.141234 CGTAAAGGAGACGGGCCTC 59.859 63.158 0.84 0.00 36.66 4.70
37 38 4.335647 CCTCCGCCTTGTGCAGGT 62.336 66.667 0.00 0.00 46.07 4.00
70 71 2.831742 CATTGGCTGCCGCTCCAT 60.832 61.111 14.98 0.00 36.09 3.41
71 72 2.517875 ATTGGCTGCCGCTCCATC 60.518 61.111 14.98 0.00 36.09 3.51
82 83 4.547367 CTCCATCGCCGGGGGAAC 62.547 72.222 19.63 0.00 0.00 3.62
85 86 4.770874 CATCGCCGGGGGAACGTT 62.771 66.667 19.63 0.00 0.00 3.99
86 87 4.462280 ATCGCCGGGGGAACGTTC 62.462 66.667 20.14 20.14 0.00 3.95
88 89 4.992511 CGCCGGGGGAACGTTCAA 62.993 66.667 28.24 0.00 0.00 2.69
89 90 3.359523 GCCGGGGGAACGTTCAAC 61.360 66.667 28.24 19.78 0.00 3.18
90 91 2.670592 CCGGGGGAACGTTCAACC 60.671 66.667 28.24 26.38 0.00 3.77
91 92 2.111460 CGGGGGAACGTTCAACCA 59.889 61.111 30.26 0.00 0.00 3.67
92 93 1.302993 CGGGGGAACGTTCAACCAT 60.303 57.895 30.26 0.00 0.00 3.55
93 94 1.303091 CGGGGGAACGTTCAACCATC 61.303 60.000 30.26 18.89 0.00 3.51
94 95 1.303091 GGGGGAACGTTCAACCATCG 61.303 60.000 30.26 0.00 0.00 3.84
95 96 0.604511 GGGGAACGTTCAACCATCGT 60.605 55.000 28.24 0.00 39.49 3.73
109 110 4.090723 TCGTTGGCGAAGGAGAGA 57.909 55.556 0.00 0.00 44.92 3.10
110 111 1.883732 TCGTTGGCGAAGGAGAGAG 59.116 57.895 0.00 0.00 44.92 3.20
111 112 1.153745 CGTTGGCGAAGGAGAGAGG 60.154 63.158 0.00 0.00 41.33 3.69
112 113 1.219393 GTTGGCGAAGGAGAGAGGG 59.781 63.158 0.00 0.00 0.00 4.30
113 114 1.990060 TTGGCGAAGGAGAGAGGGG 60.990 63.158 0.00 0.00 0.00 4.79
114 115 3.855853 GGCGAAGGAGAGAGGGGC 61.856 72.222 0.00 0.00 0.00 5.80
115 116 4.214327 GCGAAGGAGAGAGGGGCG 62.214 72.222 0.00 0.00 0.00 6.13
116 117 2.756283 CGAAGGAGAGAGGGGCGT 60.756 66.667 0.00 0.00 0.00 5.68
117 118 2.776913 CGAAGGAGAGAGGGGCGTC 61.777 68.421 0.00 0.00 0.00 5.19
118 119 2.756283 AAGGAGAGAGGGGCGTCG 60.756 66.667 0.00 0.00 0.00 5.12
119 120 4.824515 AGGAGAGAGGGGCGTCGG 62.825 72.222 0.00 0.00 0.00 4.79
121 122 3.827898 GAGAGAGGGGCGTCGGTG 61.828 72.222 0.00 0.00 0.00 4.94
148 149 4.717313 GCGAGGGAGGGCGGTTTT 62.717 66.667 0.00 0.00 0.00 2.43
149 150 2.033602 CGAGGGAGGGCGGTTTTT 59.966 61.111 0.00 0.00 0.00 1.94
150 151 1.297364 CGAGGGAGGGCGGTTTTTA 59.703 57.895 0.00 0.00 0.00 1.52
151 152 0.107361 CGAGGGAGGGCGGTTTTTAT 60.107 55.000 0.00 0.00 0.00 1.40
152 153 1.139455 CGAGGGAGGGCGGTTTTTATA 59.861 52.381 0.00 0.00 0.00 0.98
153 154 2.805657 CGAGGGAGGGCGGTTTTTATAG 60.806 54.545 0.00 0.00 0.00 1.31
154 155 1.133884 AGGGAGGGCGGTTTTTATAGC 60.134 52.381 0.00 0.00 0.00 2.97
155 156 0.942252 GGAGGGCGGTTTTTATAGCG 59.058 55.000 0.00 0.00 41.61 4.26
156 157 0.942252 GAGGGCGGTTTTTATAGCGG 59.058 55.000 0.00 0.00 39.28 5.52
158 159 4.582452 GCGGTTTTTATAGCGGCG 57.418 55.556 0.51 0.51 39.28 6.46
159 160 2.008328 GCGGTTTTTATAGCGGCGA 58.992 52.632 12.98 0.00 39.28 5.54
160 161 0.042448 GCGGTTTTTATAGCGGCGAG 60.042 55.000 12.98 0.00 39.28 5.03
161 162 1.283736 CGGTTTTTATAGCGGCGAGT 58.716 50.000 12.98 0.00 35.53 4.18
162 163 1.005347 CGGTTTTTATAGCGGCGAGTG 60.005 52.381 12.98 0.00 35.53 3.51
163 164 1.329599 GGTTTTTATAGCGGCGAGTGG 59.670 52.381 12.98 0.00 0.00 4.00
164 165 2.273557 GTTTTTATAGCGGCGAGTGGA 58.726 47.619 12.98 0.00 0.00 4.02
165 166 1.930567 TTTTATAGCGGCGAGTGGAC 58.069 50.000 12.98 0.00 0.00 4.02
186 187 3.414700 GAGCGGGCGACAACAGTG 61.415 66.667 0.00 0.00 0.00 3.66
187 188 4.235762 AGCGGGCGACAACAGTGT 62.236 61.111 0.00 0.00 42.10 3.55
188 189 4.012895 GCGGGCGACAACAGTGTG 62.013 66.667 0.00 0.00 38.41 3.82
189 190 3.345808 CGGGCGACAACAGTGTGG 61.346 66.667 0.00 0.00 38.41 4.17
190 191 2.110213 GGGCGACAACAGTGTGGA 59.890 61.111 4.15 0.00 38.41 4.02
191 192 2.251642 GGGCGACAACAGTGTGGAC 61.252 63.158 4.15 0.00 40.64 4.02
192 193 2.594962 GGCGACAACAGTGTGGACG 61.595 63.158 16.71 16.71 38.41 4.79
193 194 2.928361 CGACAACAGTGTGGACGC 59.072 61.111 9.51 0.00 38.41 5.19
194 195 1.880796 CGACAACAGTGTGGACGCA 60.881 57.895 9.51 0.00 38.41 5.24
195 196 1.221466 CGACAACAGTGTGGACGCAT 61.221 55.000 9.51 0.00 38.41 4.73
196 197 0.235665 GACAACAGTGTGGACGCATG 59.764 55.000 4.15 0.00 38.41 4.06
197 198 1.165907 ACAACAGTGTGGACGCATGG 61.166 55.000 4.15 0.00 36.31 3.66
198 199 2.260869 AACAGTGTGGACGCATGGC 61.261 57.895 0.00 0.00 0.00 4.40
228 229 4.520846 GGACGCGCGCCTTCATTG 62.521 66.667 32.58 12.27 0.00 2.82
235 236 3.434319 CGCCTTCATTGCGCCACT 61.434 61.111 4.18 0.00 46.01 4.00
236 237 2.486966 GCCTTCATTGCGCCACTC 59.513 61.111 4.18 0.00 0.00 3.51
237 238 2.787249 CCTTCATTGCGCCACTCG 59.213 61.111 4.18 0.00 42.12 4.18
238 239 2.034879 CCTTCATTGCGCCACTCGT 61.035 57.895 4.18 0.00 41.07 4.18
239 240 1.133253 CTTCATTGCGCCACTCGTG 59.867 57.895 4.18 0.00 41.07 4.35
240 241 1.291184 CTTCATTGCGCCACTCGTGA 61.291 55.000 4.18 0.00 41.07 4.35
241 242 1.291184 TTCATTGCGCCACTCGTGAG 61.291 55.000 4.18 0.00 41.07 3.51
242 243 2.434884 ATTGCGCCACTCGTGAGG 60.435 61.111 4.18 0.00 41.07 3.86
243 244 2.942796 ATTGCGCCACTCGTGAGGA 61.943 57.895 4.18 0.00 41.07 3.71
244 245 2.449031 ATTGCGCCACTCGTGAGGAA 62.449 55.000 4.18 0.90 41.07 3.36
245 246 2.125512 GCGCCACTCGTGAGGAAT 60.126 61.111 5.07 0.00 41.07 3.01
246 247 2.167861 GCGCCACTCGTGAGGAATC 61.168 63.158 5.07 0.00 41.07 2.52
247 248 1.215382 CGCCACTCGTGAGGAATCA 59.785 57.895 5.07 0.00 0.00 2.57
248 249 0.389817 CGCCACTCGTGAGGAATCAA 60.390 55.000 5.07 0.00 0.00 2.57
249 250 1.740380 CGCCACTCGTGAGGAATCAAT 60.740 52.381 5.07 0.00 0.00 2.57
250 251 1.667724 GCCACTCGTGAGGAATCAATG 59.332 52.381 5.07 0.00 0.00 2.82
251 252 2.283298 CCACTCGTGAGGAATCAATGG 58.717 52.381 1.43 0.00 0.00 3.16
252 253 2.093500 CCACTCGTGAGGAATCAATGGA 60.093 50.000 1.43 0.00 0.00 3.41
253 254 3.599343 CACTCGTGAGGAATCAATGGAA 58.401 45.455 1.43 0.00 0.00 3.53
254 255 3.620374 CACTCGTGAGGAATCAATGGAAG 59.380 47.826 1.43 0.00 0.00 3.46
255 256 3.201290 CTCGTGAGGAATCAATGGAAGG 58.799 50.000 0.00 0.00 0.00 3.46
256 257 1.672881 CGTGAGGAATCAATGGAAGGC 59.327 52.381 0.00 0.00 0.00 4.35
257 258 2.681976 CGTGAGGAATCAATGGAAGGCT 60.682 50.000 0.00 0.00 0.00 4.58
258 259 2.686915 GTGAGGAATCAATGGAAGGCTG 59.313 50.000 0.00 0.00 0.00 4.85
259 260 2.305009 GAGGAATCAATGGAAGGCTGG 58.695 52.381 0.00 0.00 0.00 4.85
260 261 0.749049 GGAATCAATGGAAGGCTGGC 59.251 55.000 0.00 0.00 0.00 4.85
261 262 0.749049 GAATCAATGGAAGGCTGGCC 59.251 55.000 3.00 3.00 0.00 5.36
262 263 1.039233 AATCAATGGAAGGCTGGCCG 61.039 55.000 5.93 0.00 41.95 6.13
263 264 1.925285 ATCAATGGAAGGCTGGCCGA 61.925 55.000 5.93 0.00 41.95 5.54
264 265 2.044946 AATGGAAGGCTGGCCGAC 60.045 61.111 5.93 0.00 41.95 4.79
265 266 3.976701 AATGGAAGGCTGGCCGACG 62.977 63.158 5.93 0.00 41.95 5.12
278 279 3.118454 CGACGGCAACCTTCGCAT 61.118 61.111 0.00 0.00 38.36 4.73
279 280 2.677003 CGACGGCAACCTTCGCATT 61.677 57.895 0.00 0.00 38.36 3.56
280 281 1.154225 GACGGCAACCTTCGCATTG 60.154 57.895 0.00 0.00 0.00 2.82
281 282 1.573829 GACGGCAACCTTCGCATTGA 61.574 55.000 0.00 0.00 0.00 2.57
282 283 0.960364 ACGGCAACCTTCGCATTGAT 60.960 50.000 0.00 0.00 0.00 2.57
283 284 0.171007 CGGCAACCTTCGCATTGATT 59.829 50.000 0.00 0.00 0.00 2.57
284 285 1.795162 CGGCAACCTTCGCATTGATTC 60.795 52.381 0.00 0.00 0.00 2.52
285 286 1.469767 GGCAACCTTCGCATTGATTCC 60.470 52.381 0.00 0.00 0.00 3.01
286 287 1.469767 GCAACCTTCGCATTGATTCCC 60.470 52.381 0.00 0.00 0.00 3.97
287 288 1.094785 AACCTTCGCATTGATTCCCG 58.905 50.000 0.00 0.00 0.00 5.14
288 289 1.356624 CCTTCGCATTGATTCCCGC 59.643 57.895 0.00 0.00 0.00 6.13
289 290 1.375853 CCTTCGCATTGATTCCCGCA 61.376 55.000 0.00 0.00 0.00 5.69
290 291 0.028505 CTTCGCATTGATTCCCGCAG 59.971 55.000 0.00 0.00 0.00 5.18
304 305 3.890674 GCAGGAAAACGAGGCGAT 58.109 55.556 0.00 0.00 0.00 4.58
305 306 1.425428 GCAGGAAAACGAGGCGATG 59.575 57.895 0.00 0.00 0.00 3.84
306 307 1.019278 GCAGGAAAACGAGGCGATGA 61.019 55.000 0.00 0.00 0.00 2.92
307 308 1.002366 CAGGAAAACGAGGCGATGAG 58.998 55.000 0.00 0.00 0.00 2.90
308 309 0.108138 AGGAAAACGAGGCGATGAGG 60.108 55.000 0.00 0.00 0.00 3.86
309 310 0.108329 GGAAAACGAGGCGATGAGGA 60.108 55.000 0.00 0.00 0.00 3.71
310 311 1.000145 GAAAACGAGGCGATGAGGAC 59.000 55.000 0.00 0.00 0.00 3.85
311 312 0.736325 AAAACGAGGCGATGAGGACG 60.736 55.000 0.00 0.00 0.00 4.79
312 313 1.592400 AAACGAGGCGATGAGGACGA 61.592 55.000 0.00 0.00 0.00 4.20
313 314 2.024871 CGAGGCGATGAGGACGAC 59.975 66.667 0.00 0.00 39.24 4.34
314 315 2.024871 GAGGCGATGAGGACGACG 59.975 66.667 0.00 0.00 44.04 5.12
315 316 2.437895 AGGCGATGAGGACGACGA 60.438 61.111 0.00 0.00 44.04 4.20
316 317 1.989966 GAGGCGATGAGGACGACGAA 61.990 60.000 0.00 0.00 44.04 3.85
317 318 1.586564 GGCGATGAGGACGACGAAG 60.587 63.158 0.00 0.00 0.00 3.79
318 319 1.586564 GCGATGAGGACGACGAAGG 60.587 63.158 0.00 0.00 0.00 3.46
319 320 1.064296 CGATGAGGACGACGAAGGG 59.936 63.158 0.00 0.00 0.00 3.95
320 321 1.437986 GATGAGGACGACGAAGGGG 59.562 63.158 0.00 0.00 0.00 4.79
321 322 2.630592 GATGAGGACGACGAAGGGGC 62.631 65.000 0.00 0.00 0.00 5.80
322 323 4.144703 GAGGACGACGAAGGGGCC 62.145 72.222 0.00 0.00 33.11 5.80
325 326 4.452733 GACGACGAAGGGGCCCAG 62.453 72.222 27.72 18.04 0.00 4.45
346 347 4.436998 CTGACTCGGCGGGTCCAC 62.437 72.222 34.54 13.85 33.22 4.02
354 355 4.660938 GCGGGTCCACCAGGCTTT 62.661 66.667 0.00 0.00 40.22 3.51
355 356 2.115266 CGGGTCCACCAGGCTTTT 59.885 61.111 0.00 0.00 40.22 2.27
356 357 2.268076 CGGGTCCACCAGGCTTTTG 61.268 63.158 0.00 0.00 40.22 2.44
357 358 2.574018 GGGTCCACCAGGCTTTTGC 61.574 63.158 0.00 0.00 41.65 3.68
358 359 2.919494 GGTCCACCAGGCTTTTGCG 61.919 63.158 0.00 0.00 40.48 4.85
369 370 2.823196 GCTTTTGCGCCAAAAAGTTT 57.177 40.000 25.06 0.00 45.12 2.66
370 371 3.129852 GCTTTTGCGCCAAAAAGTTTT 57.870 38.095 25.06 0.00 45.12 2.43
371 372 3.097910 GCTTTTGCGCCAAAAAGTTTTC 58.902 40.909 25.06 11.45 45.12 2.29
372 373 3.679725 CTTTTGCGCCAAAAAGTTTTCC 58.320 40.909 19.50 0.00 41.77 3.13
373 374 2.682155 TTGCGCCAAAAAGTTTTCCT 57.318 40.000 4.18 0.00 0.00 3.36
374 375 2.217429 TGCGCCAAAAAGTTTTCCTC 57.783 45.000 4.18 0.00 0.00 3.71
375 376 1.128513 GCGCCAAAAAGTTTTCCTCG 58.871 50.000 0.32 6.53 0.00 4.63
376 377 1.766069 CGCCAAAAAGTTTTCCTCGG 58.234 50.000 0.32 2.02 0.00 4.63
377 378 1.497991 GCCAAAAAGTTTTCCTCGGC 58.502 50.000 0.32 8.07 0.00 5.54
378 379 1.766069 CCAAAAAGTTTTCCTCGGCG 58.234 50.000 0.00 0.00 0.00 6.46
379 380 1.128513 CAAAAAGTTTTCCTCGGCGC 58.871 50.000 0.00 0.00 0.00 6.53
380 381 0.031585 AAAAAGTTTTCCTCGGCGCC 59.968 50.000 19.07 19.07 0.00 6.53
381 382 1.802337 AAAAGTTTTCCTCGGCGCCC 61.802 55.000 23.46 3.47 0.00 6.13
382 383 4.717313 AGTTTTCCTCGGCGCCCC 62.717 66.667 23.46 0.00 0.00 5.80
426 427 4.547367 CGGGTTCGGCCTGGATCC 62.547 72.222 4.20 4.20 40.02 3.36
428 429 3.782443 GGTTCGGCCTGGATCCGT 61.782 66.667 7.39 0.00 46.49 4.69
429 430 2.202892 GTTCGGCCTGGATCCGTC 60.203 66.667 7.39 0.00 46.49 4.79
430 431 3.833645 TTCGGCCTGGATCCGTCG 61.834 66.667 7.39 7.32 46.49 5.12
435 436 4.530857 CCTGGATCCGTCGGCACC 62.531 72.222 6.34 12.60 0.00 5.01
436 437 3.770040 CTGGATCCGTCGGCACCA 61.770 66.667 21.65 21.65 0.00 4.17
437 438 3.309436 CTGGATCCGTCGGCACCAA 62.309 63.158 22.64 11.77 30.62 3.67
438 439 2.189521 GGATCCGTCGGCACCAAT 59.810 61.111 17.50 2.36 0.00 3.16
439 440 1.451387 GGATCCGTCGGCACCAATT 60.451 57.895 17.50 0.00 0.00 2.32
440 441 1.029947 GGATCCGTCGGCACCAATTT 61.030 55.000 17.50 0.00 0.00 1.82
441 442 0.377203 GATCCGTCGGCACCAATTTC 59.623 55.000 6.34 0.00 0.00 2.17
442 443 1.366111 ATCCGTCGGCACCAATTTCG 61.366 55.000 6.34 0.00 0.00 3.46
443 444 2.030401 CCGTCGGCACCAATTTCGA 61.030 57.895 0.00 0.00 0.00 3.71
444 445 1.131826 CGTCGGCACCAATTTCGAC 59.868 57.895 0.00 0.00 45.61 4.20
445 446 1.500396 GTCGGCACCAATTTCGACC 59.500 57.895 0.00 0.00 44.02 4.79
446 447 1.673009 TCGGCACCAATTTCGACCC 60.673 57.895 0.00 0.00 0.00 4.46
447 448 1.674322 CGGCACCAATTTCGACCCT 60.674 57.895 0.00 0.00 0.00 4.34
448 449 0.391927 CGGCACCAATTTCGACCCTA 60.392 55.000 0.00 0.00 0.00 3.53
449 450 1.828979 GGCACCAATTTCGACCCTAA 58.171 50.000 0.00 0.00 0.00 2.69
450 451 1.471287 GGCACCAATTTCGACCCTAAC 59.529 52.381 0.00 0.00 0.00 2.34
451 452 1.471287 GCACCAATTTCGACCCTAACC 59.529 52.381 0.00 0.00 0.00 2.85
452 453 1.735571 CACCAATTTCGACCCTAACCG 59.264 52.381 0.00 0.00 0.00 4.44
453 454 1.339342 ACCAATTTCGACCCTAACCGG 60.339 52.381 0.00 0.00 0.00 5.28
454 455 0.730840 CAATTTCGACCCTAACCGGC 59.269 55.000 0.00 0.00 0.00 6.13
455 456 0.741927 AATTTCGACCCTAACCGGCG 60.742 55.000 0.00 0.00 0.00 6.46
456 457 1.606885 ATTTCGACCCTAACCGGCGA 61.607 55.000 9.30 0.00 32.23 5.54
457 458 1.814772 TTTCGACCCTAACCGGCGAA 61.815 55.000 9.30 3.69 38.65 4.70
458 459 1.606885 TTCGACCCTAACCGGCGAAT 61.607 55.000 9.30 0.00 36.89 3.34
459 460 0.751277 TCGACCCTAACCGGCGAATA 60.751 55.000 9.30 0.00 31.52 1.75
460 461 0.316204 CGACCCTAACCGGCGAATAT 59.684 55.000 9.30 0.00 0.00 1.28
461 462 1.269936 CGACCCTAACCGGCGAATATT 60.270 52.381 9.30 0.00 0.00 1.28
462 463 2.140717 GACCCTAACCGGCGAATATTG 58.859 52.381 9.30 0.00 0.00 1.90
463 464 1.202722 ACCCTAACCGGCGAATATTGG 60.203 52.381 9.30 3.98 0.00 3.16
464 465 1.519408 CCTAACCGGCGAATATTGGG 58.481 55.000 9.30 4.80 0.00 4.12
465 466 0.872388 CTAACCGGCGAATATTGGGC 59.128 55.000 9.30 13.15 0.00 5.36
466 467 0.470766 TAACCGGCGAATATTGGGCT 59.529 50.000 19.30 6.08 0.00 5.19
467 468 0.395173 AACCGGCGAATATTGGGCTT 60.395 50.000 19.30 7.40 0.00 4.35
468 469 0.818040 ACCGGCGAATATTGGGCTTC 60.818 55.000 19.30 0.00 0.00 3.86
469 470 0.535102 CCGGCGAATATTGGGCTTCT 60.535 55.000 19.30 0.00 0.00 2.85
470 471 0.588252 CGGCGAATATTGGGCTTCTG 59.412 55.000 19.30 3.01 0.00 3.02
471 472 0.954452 GGCGAATATTGGGCTTCTGG 59.046 55.000 15.46 0.00 0.00 3.86
472 473 1.476833 GGCGAATATTGGGCTTCTGGA 60.477 52.381 15.46 0.00 0.00 3.86
473 474 1.876156 GCGAATATTGGGCTTCTGGAG 59.124 52.381 0.00 0.00 0.00 3.86
474 475 2.498167 CGAATATTGGGCTTCTGGAGG 58.502 52.381 0.00 0.00 0.00 4.30
481 482 2.659610 GCTTCTGGAGGCACGAGT 59.340 61.111 0.00 0.00 33.19 4.18
482 483 1.890894 GCTTCTGGAGGCACGAGTA 59.109 57.895 0.00 0.00 33.19 2.59
483 484 0.179124 GCTTCTGGAGGCACGAGTAG 60.179 60.000 0.00 0.00 33.19 2.57
484 485 0.457851 CTTCTGGAGGCACGAGTAGG 59.542 60.000 0.00 0.00 0.00 3.18
485 486 1.605058 TTCTGGAGGCACGAGTAGGC 61.605 60.000 0.00 0.00 0.00 3.93
492 493 2.327200 GGCACGAGTAGGCCTATTTT 57.673 50.000 17.38 4.85 46.74 1.82
493 494 2.640184 GGCACGAGTAGGCCTATTTTT 58.360 47.619 17.38 2.08 46.74 1.94
494 495 2.612672 GGCACGAGTAGGCCTATTTTTC 59.387 50.000 17.38 10.59 46.74 2.29
495 496 3.267483 GCACGAGTAGGCCTATTTTTCA 58.733 45.455 17.38 0.00 0.00 2.69
496 497 3.687698 GCACGAGTAGGCCTATTTTTCAA 59.312 43.478 17.38 0.00 0.00 2.69
497 498 4.201822 GCACGAGTAGGCCTATTTTTCAAG 60.202 45.833 17.38 7.95 0.00 3.02
498 499 3.939592 ACGAGTAGGCCTATTTTTCAAGC 59.060 43.478 17.38 0.00 0.00 4.01
499 500 3.312697 CGAGTAGGCCTATTTTTCAAGCC 59.687 47.826 17.38 0.00 44.20 4.35
502 503 0.179111 GGCCTATTTTTCAAGCCGGC 60.179 55.000 21.89 21.89 33.18 6.13
503 504 0.525455 GCCTATTTTTCAAGCCGGCG 60.525 55.000 23.20 8.11 0.00 6.46
504 505 0.525455 CCTATTTTTCAAGCCGGCGC 60.525 55.000 23.20 0.00 0.00 6.53
524 525 4.579354 AAAAAGGGGATTGGGGGC 57.421 55.556 0.00 0.00 0.00 5.80
525 526 1.229820 AAAAAGGGGATTGGGGGCC 60.230 57.895 0.00 0.00 0.00 5.80
526 527 1.760709 AAAAAGGGGATTGGGGGCCT 61.761 55.000 0.84 0.00 0.00 5.19
527 528 2.181523 AAAAGGGGATTGGGGGCCTC 62.182 60.000 0.84 0.00 0.00 4.70
528 529 3.620680 AAGGGGATTGGGGGCCTCT 62.621 63.158 4.32 0.00 36.25 3.69
529 530 3.029981 GGGGATTGGGGGCCTCTT 61.030 66.667 4.32 0.00 0.00 2.85
530 531 2.280079 GGGATTGGGGGCCTCTTG 59.720 66.667 4.32 0.00 0.00 3.02
531 532 2.280079 GGATTGGGGGCCTCTTGG 59.720 66.667 4.32 0.00 0.00 3.61
532 533 2.280079 GATTGGGGGCCTCTTGGG 59.720 66.667 4.32 0.00 38.36 4.12
533 534 3.358824 ATTGGGGGCCTCTTGGGG 61.359 66.667 4.32 0.00 35.12 4.96
548 549 2.514824 GGGGGCGAGTTGAGATGC 60.515 66.667 0.00 0.00 0.00 3.91
549 550 2.586792 GGGGCGAGTTGAGATGCT 59.413 61.111 0.00 0.00 0.00 3.79
550 551 1.522580 GGGGCGAGTTGAGATGCTC 60.523 63.158 0.00 0.00 0.00 4.26
556 557 1.919918 GAGTTGAGATGCTCGAGGTG 58.080 55.000 15.58 0.00 32.35 4.00
557 558 0.534412 AGTTGAGATGCTCGAGGTGG 59.466 55.000 15.58 0.00 32.35 4.61
558 559 1.086634 GTTGAGATGCTCGAGGTGGC 61.087 60.000 15.58 0.15 32.35 5.01
559 560 2.107953 GAGATGCTCGAGGTGGCC 59.892 66.667 15.58 0.00 0.00 5.36
560 561 2.685017 AGATGCTCGAGGTGGCCA 60.685 61.111 15.58 0.00 0.00 5.36
561 562 2.037620 GAGATGCTCGAGGTGGCCAT 62.038 60.000 9.72 8.39 0.00 4.40
562 563 1.890979 GATGCTCGAGGTGGCCATG 60.891 63.158 9.72 0.00 0.00 3.66
563 564 4.783621 TGCTCGAGGTGGCCATGC 62.784 66.667 9.72 7.75 0.00 4.06
564 565 4.783621 GCTCGAGGTGGCCATGCA 62.784 66.667 9.72 0.00 0.00 3.96
565 566 2.191375 CTCGAGGTGGCCATGCAT 59.809 61.111 9.72 0.00 0.00 3.96
566 567 2.124612 TCGAGGTGGCCATGCATG 60.125 61.111 20.19 20.19 0.00 4.06
567 568 3.896133 CGAGGTGGCCATGCATGC 61.896 66.667 21.69 11.82 0.00 4.06
568 569 2.756691 GAGGTGGCCATGCATGCA 60.757 61.111 25.04 25.04 0.00 3.96
569 570 2.042333 AGGTGGCCATGCATGCAT 60.042 55.556 27.46 27.46 37.08 3.96
578 579 2.570442 CATGCATGCATGTGCTGTAA 57.430 45.000 40.30 10.77 46.20 2.41
579 580 3.092334 CATGCATGCATGTGCTGTAAT 57.908 42.857 40.30 14.19 46.20 1.89
580 581 3.453424 CATGCATGCATGTGCTGTAATT 58.547 40.909 40.30 13.68 46.20 1.40
581 582 4.612943 CATGCATGCATGTGCTGTAATTA 58.387 39.130 40.30 9.60 46.20 1.40
582 583 4.715527 TGCATGCATGTGCTGTAATTAA 57.284 36.364 26.79 0.00 45.27 1.40
583 584 5.265350 TGCATGCATGTGCTGTAATTAAT 57.735 34.783 26.79 0.00 45.27 1.40
584 585 6.388435 TGCATGCATGTGCTGTAATTAATA 57.612 33.333 26.79 0.00 45.27 0.98
585 586 6.207928 TGCATGCATGTGCTGTAATTAATAC 58.792 36.000 26.79 5.79 45.27 1.89
586 587 6.183360 TGCATGCATGTGCTGTAATTAATACA 60.183 34.615 26.79 8.29 45.27 2.29
587 588 6.864685 GCATGCATGTGCTGTAATTAATACAT 59.135 34.615 26.79 0.00 43.42 2.29
588 589 7.383029 GCATGCATGTGCTGTAATTAATACATT 59.617 33.333 26.79 0.00 43.42 2.71
589 590 8.696175 CATGCATGTGCTGTAATTAATACATTG 58.304 33.333 18.91 0.00 43.42 2.82
590 591 7.201835 TGCATGTGCTGTAATTAATACATTGG 58.798 34.615 6.55 0.00 43.42 3.16
591 592 7.147932 TGCATGTGCTGTAATTAATACATTGGT 60.148 33.333 6.55 0.00 43.42 3.67
592 593 8.349245 GCATGTGCTGTAATTAATACATTGGTA 58.651 33.333 0.00 0.00 43.42 3.25
648 649 9.695526 TTAATTAAGTACTTCTGCAAACTACGA 57.304 29.630 12.39 0.00 0.00 3.43
649 650 8.597662 AATTAAGTACTTCTGCAAACTACGAA 57.402 30.769 12.39 0.00 0.00 3.85
650 651 8.597662 ATTAAGTACTTCTGCAAACTACGAAA 57.402 30.769 12.39 0.00 0.00 3.46
651 652 8.597662 TTAAGTACTTCTGCAAACTACGAAAT 57.402 30.769 12.39 0.00 0.00 2.17
652 653 7.492352 AAGTACTTCTGCAAACTACGAAATT 57.508 32.000 1.12 0.00 0.00 1.82
653 654 8.597662 AAGTACTTCTGCAAACTACGAAATTA 57.402 30.769 1.12 0.00 0.00 1.40
654 655 8.597662 AGTACTTCTGCAAACTACGAAATTAA 57.402 30.769 0.00 0.00 0.00 1.40
655 656 9.216117 AGTACTTCTGCAAACTACGAAATTAAT 57.784 29.630 0.00 0.00 0.00 1.40
656 657 9.821662 GTACTTCTGCAAACTACGAAATTAATT 57.178 29.630 0.00 0.00 0.00 1.40
658 659 9.394477 ACTTCTGCAAACTACGAAATTAATTTC 57.606 29.630 24.91 24.91 42.00 2.17
659 660 9.393249 CTTCTGCAAACTACGAAATTAATTTCA 57.607 29.630 30.60 17.20 44.83 2.69
660 661 9.906660 TTCTGCAAACTACGAAATTAATTTCAT 57.093 25.926 30.60 22.93 44.83 2.57
661 662 9.554724 TCTGCAAACTACGAAATTAATTTCATC 57.445 29.630 30.60 13.15 44.83 2.92
662 663 9.340695 CTGCAAACTACGAAATTAATTTCATCA 57.659 29.630 30.60 18.24 44.83 3.07
663 664 9.853555 TGCAAACTACGAAATTAATTTCATCAT 57.146 25.926 30.60 19.10 44.83 2.45
684 685 9.127006 CATCATTCTCATCTATCTTAGTTGACG 57.873 37.037 0.00 0.00 32.66 4.35
685 686 7.652727 TCATTCTCATCTATCTTAGTTGACGG 58.347 38.462 0.00 0.00 32.66 4.79
686 687 6.392625 TTCTCATCTATCTTAGTTGACGGG 57.607 41.667 0.00 0.00 32.66 5.28
687 688 5.691896 TCTCATCTATCTTAGTTGACGGGA 58.308 41.667 0.00 0.00 32.66 5.14
688 689 6.307776 TCTCATCTATCTTAGTTGACGGGAT 58.692 40.000 0.00 0.00 32.66 3.85
689 690 6.778069 TCTCATCTATCTTAGTTGACGGGATT 59.222 38.462 0.00 0.00 32.66 3.01
690 691 7.287927 TCTCATCTATCTTAGTTGACGGGATTT 59.712 37.037 0.00 0.00 32.66 2.17
691 692 7.792032 TCATCTATCTTAGTTGACGGGATTTT 58.208 34.615 0.00 0.00 31.48 1.82
692 693 7.926555 TCATCTATCTTAGTTGACGGGATTTTC 59.073 37.037 0.00 0.00 31.48 2.29
693 694 6.270815 TCTATCTTAGTTGACGGGATTTTCG 58.729 40.000 0.00 0.00 0.00 3.46
694 695 4.524316 TCTTAGTTGACGGGATTTTCGA 57.476 40.909 0.00 0.00 0.00 3.71
695 696 4.885413 TCTTAGTTGACGGGATTTTCGAA 58.115 39.130 0.00 0.00 0.00 3.71
696 697 5.484715 TCTTAGTTGACGGGATTTTCGAAT 58.515 37.500 0.00 0.00 0.00 3.34
697 698 5.935789 TCTTAGTTGACGGGATTTTCGAATT 59.064 36.000 0.00 0.00 0.00 2.17
698 699 7.098477 TCTTAGTTGACGGGATTTTCGAATTA 58.902 34.615 0.00 0.00 0.00 1.40
699 700 7.603404 TCTTAGTTGACGGGATTTTCGAATTAA 59.397 33.333 0.00 0.00 0.00 1.40
700 701 6.178239 AGTTGACGGGATTTTCGAATTAAG 57.822 37.500 0.00 0.00 0.00 1.85
701 702 4.609691 TGACGGGATTTTCGAATTAAGC 57.390 40.909 0.00 0.00 0.00 3.09
702 703 3.375922 TGACGGGATTTTCGAATTAAGCC 59.624 43.478 8.11 8.11 0.00 4.35
703 704 3.617284 ACGGGATTTTCGAATTAAGCCT 58.383 40.909 14.64 0.00 30.71 4.58
704 705 4.014406 ACGGGATTTTCGAATTAAGCCTT 58.986 39.130 14.64 2.41 30.71 4.35
705 706 4.142469 ACGGGATTTTCGAATTAAGCCTTG 60.142 41.667 14.64 10.79 30.71 3.61
706 707 4.142469 CGGGATTTTCGAATTAAGCCTTGT 60.142 41.667 14.64 0.00 30.71 3.16
707 708 5.065474 CGGGATTTTCGAATTAAGCCTTGTA 59.935 40.000 14.64 0.00 30.71 2.41
708 709 6.403855 CGGGATTTTCGAATTAAGCCTTGTAA 60.404 38.462 14.64 0.00 30.71 2.41
709 710 7.317390 GGGATTTTCGAATTAAGCCTTGTAAA 58.683 34.615 14.64 0.00 30.71 2.01
710 711 7.979537 GGGATTTTCGAATTAAGCCTTGTAAAT 59.020 33.333 14.64 0.58 30.71 1.40
711 712 9.020813 GGATTTTCGAATTAAGCCTTGTAAATC 57.979 33.333 9.16 5.91 0.00 2.17
712 713 9.788960 GATTTTCGAATTAAGCCTTGTAAATCT 57.211 29.630 0.00 0.00 0.00 2.40
713 714 8.964420 TTTTCGAATTAAGCCTTGTAAATCTG 57.036 30.769 0.00 0.00 0.00 2.90
714 715 7.915293 TTCGAATTAAGCCTTGTAAATCTGA 57.085 32.000 0.00 0.00 0.00 3.27
715 716 7.915293 TCGAATTAAGCCTTGTAAATCTGAA 57.085 32.000 0.00 0.00 0.00 3.02
716 717 8.330466 TCGAATTAAGCCTTGTAAATCTGAAA 57.670 30.769 0.00 0.00 0.00 2.69
717 718 8.450964 TCGAATTAAGCCTTGTAAATCTGAAAG 58.549 33.333 0.00 0.00 0.00 2.62
718 719 7.698130 CGAATTAAGCCTTGTAAATCTGAAAGG 59.302 37.037 1.51 1.51 41.81 3.11
719 720 8.422577 AATTAAGCCTTGTAAATCTGAAAGGT 57.577 30.769 6.87 0.00 41.11 3.50
720 721 5.712152 AAGCCTTGTAAATCTGAAAGGTG 57.288 39.130 6.87 0.00 41.11 4.00
721 722 4.082125 AGCCTTGTAAATCTGAAAGGTGG 58.918 43.478 6.87 0.00 41.11 4.61
722 723 4.079253 GCCTTGTAAATCTGAAAGGTGGA 58.921 43.478 6.87 0.00 41.11 4.02
727 728 7.094762 CCTTGTAAATCTGAAAGGTGGAAGTAC 60.095 40.741 0.00 0.00 35.47 2.73
728 729 5.929992 TGTAAATCTGAAAGGTGGAAGTACG 59.070 40.000 0.00 0.00 0.00 3.67
734 735 4.813027 TGAAAGGTGGAAGTACGTATCAC 58.187 43.478 0.00 5.76 0.00 3.06
763 764 6.916360 ATGCCTTTGGATGTCTTTTCTTAA 57.084 33.333 0.00 0.00 0.00 1.85
793 796 2.038007 AAGAGAGGAGCGGGCAGA 59.962 61.111 0.00 0.00 0.00 4.26
908 911 3.775316 GGTTTCCTCATAGTCCTCCTTGA 59.225 47.826 0.00 0.00 0.00 3.02
1027 1030 4.954970 ACTTGCTGGTGGCGGTGG 62.955 66.667 0.00 0.00 45.43 4.61
1255 1258 0.798776 CAAGTCCGTCCACAAGATGC 59.201 55.000 0.00 0.00 0.00 3.91
1264 1267 0.609957 CCACAAGATGCTTGGCTCCA 60.610 55.000 11.40 0.00 0.00 3.86
1309 1312 1.279271 GCAGATACCACACCCTGTTCT 59.721 52.381 0.00 0.00 0.00 3.01
1527 1530 1.730902 CTACCGCGCATCGATCCTG 60.731 63.158 8.75 0.00 41.67 3.86
1538 1541 3.474570 GATCCTGGCTCGCCACCT 61.475 66.667 6.52 0.00 41.89 4.00
1539 1542 3.453070 GATCCTGGCTCGCCACCTC 62.453 68.421 6.52 0.58 41.89 3.85
1644 1647 4.441695 CTCGAGAAGGCTGCGGCA 62.442 66.667 21.31 1.29 40.87 5.69
1647 1650 4.400961 GAGAAGGCTGCGGCAGGT 62.401 66.667 29.44 2.74 40.87 4.00
1938 1941 0.252197 AGGTATTTGAGCGTCACCCC 59.748 55.000 0.00 0.00 0.00 4.95
1968 1971 6.636454 TTTTACCTCTCAAGGATACATGGT 57.364 37.500 0.00 0.00 46.67 3.55
2192 2195 9.421806 CTCTTAATGAATGTCTTATAGGCTCAG 57.578 37.037 0.00 0.00 0.00 3.35
2391 2394 6.370994 ACAGCTCTCTTATGTCATTTTGTCAG 59.629 38.462 0.00 0.00 0.00 3.51
2416 2419 6.472163 GCCCACAGAACAATTTGTTTATATCG 59.528 38.462 15.54 5.00 41.28 2.92
2460 2463 1.083806 TTCCTGCAGCTACGAATGCG 61.084 55.000 8.66 0.00 45.54 4.73
2512 2516 7.599998 CCCTCTGTTCCAAAATAATTGAAGTTG 59.400 37.037 0.00 0.00 0.00 3.16
2531 2535 4.141251 AGTTGTAGGTTTGTCCCAAGTCAT 60.141 41.667 0.00 0.00 36.75 3.06
2548 2552 8.792633 CCCAAGTCATACTTCATTAACTTTGAA 58.207 33.333 0.00 0.00 36.03 2.69
2772 2833 0.312102 GCAAGCGCCTTTTCTTGTCT 59.688 50.000 2.29 0.00 41.15 3.41
2888 2951 9.567848 GTTTGTTCTGTTTTTCTAAAGATGACA 57.432 29.630 0.00 0.00 0.00 3.58
2958 3021 7.012421 GCATAGTTATATAGGGCTTGGTTATGC 59.988 40.741 0.00 0.00 34.01 3.14
3041 3104 3.322254 GTCCTTCAGAAACCAGACAGAGA 59.678 47.826 0.00 0.00 0.00 3.10
3085 3148 3.515602 AGGAAATCATATGGTGGGCTC 57.484 47.619 2.13 0.00 0.00 4.70
3086 3149 3.059097 AGGAAATCATATGGTGGGCTCT 58.941 45.455 2.13 0.00 0.00 4.09
3088 3151 4.042187 AGGAAATCATATGGTGGGCTCTAC 59.958 45.833 2.13 0.00 0.00 2.59
3134 3197 3.931578 AGAAGGTGATGTTCAGCAGTAC 58.068 45.455 9.14 0.00 46.52 2.73
3135 3198 3.580458 AGAAGGTGATGTTCAGCAGTACT 59.420 43.478 9.14 0.00 46.52 2.73
3136 3199 3.601443 AGGTGATGTTCAGCAGTACTC 57.399 47.619 9.14 0.00 46.52 2.59
3137 3200 2.234908 AGGTGATGTTCAGCAGTACTCC 59.765 50.000 9.14 0.00 46.52 3.85
3138 3201 2.234908 GGTGATGTTCAGCAGTACTCCT 59.765 50.000 0.00 0.00 43.79 3.69
3139 3202 3.257393 GTGATGTTCAGCAGTACTCCTG 58.743 50.000 7.56 7.56 44.53 3.86
3140 3203 2.899900 TGATGTTCAGCAGTACTCCTGT 59.100 45.455 13.53 0.00 43.55 4.00
3141 3204 3.324846 TGATGTTCAGCAGTACTCCTGTT 59.675 43.478 13.53 0.00 43.55 3.16
3142 3205 4.526650 TGATGTTCAGCAGTACTCCTGTTA 59.473 41.667 13.53 0.91 43.55 2.41
3143 3206 4.948341 TGTTCAGCAGTACTCCTGTTAA 57.052 40.909 13.53 0.00 43.55 2.01
3144 3207 5.284861 TGTTCAGCAGTACTCCTGTTAAA 57.715 39.130 13.53 0.00 43.55 1.52
3145 3208 5.676552 TGTTCAGCAGTACTCCTGTTAAAA 58.323 37.500 13.53 0.00 43.55 1.52
3146 3209 6.116806 TGTTCAGCAGTACTCCTGTTAAAAA 58.883 36.000 13.53 0.00 43.55 1.94
3168 3231 8.897872 AAAAAGCAAATCAGATCTGAACAATT 57.102 26.923 28.40 15.60 43.58 2.32
3169 3232 9.985730 AAAAAGCAAATCAGATCTGAACAATTA 57.014 25.926 28.40 4.95 43.58 1.40
3171 3234 9.798994 AAAGCAAATCAGATCTGAACAATTATC 57.201 29.630 28.40 12.88 43.58 1.75
3172 3235 8.749026 AGCAAATCAGATCTGAACAATTATCT 57.251 30.769 28.40 14.59 43.58 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.141234 CCCGTCTCCTTTACGAGGC 59.859 63.158 0.00 0.00 45.87 4.70
3 4 1.141234 GGCCCGTCTCCTTTACGAG 59.859 63.158 0.00 0.00 42.90 4.18
4 5 1.304713 AGGCCCGTCTCCTTTACGA 60.305 57.895 0.00 0.00 42.90 3.43
5 6 1.141234 GAGGCCCGTCTCCTTTACG 59.859 63.158 0.00 0.00 40.01 3.18
53 54 2.831742 ATGGAGCGGCAGCCAATG 60.832 61.111 13.30 0.00 46.67 2.82
54 55 2.517875 GATGGAGCGGCAGCCAAT 60.518 61.111 13.30 0.00 46.67 3.16
65 66 4.547367 GTTCCCCCGGCGATGGAG 62.547 72.222 9.30 3.15 0.00 3.86
68 69 4.770874 AACGTTCCCCCGGCGATG 62.771 66.667 9.30 0.00 0.00 3.84
69 70 4.462280 GAACGTTCCCCCGGCGAT 62.462 66.667 17.68 0.00 0.00 4.58
71 72 4.992511 TTGAACGTTCCCCCGGCG 62.993 66.667 24.78 0.00 0.00 6.46
72 73 3.359523 GTTGAACGTTCCCCCGGC 61.360 66.667 24.78 5.62 0.00 6.13
73 74 2.670592 GGTTGAACGTTCCCCCGG 60.671 66.667 24.78 0.00 0.00 5.73
74 75 1.302993 ATGGTTGAACGTTCCCCCG 60.303 57.895 24.78 0.00 0.00 5.73
75 76 1.303091 CGATGGTTGAACGTTCCCCC 61.303 60.000 24.78 22.43 0.00 5.40
76 77 0.604511 ACGATGGTTGAACGTTCCCC 60.605 55.000 24.78 22.76 36.91 4.81
77 78 1.232119 AACGATGGTTGAACGTTCCC 58.768 50.000 24.78 19.26 44.84 3.97
93 94 1.153745 CCTCTCTCCTTCGCCAACG 60.154 63.158 0.00 0.00 42.01 4.10
94 95 1.219393 CCCTCTCTCCTTCGCCAAC 59.781 63.158 0.00 0.00 0.00 3.77
95 96 1.990060 CCCCTCTCTCCTTCGCCAA 60.990 63.158 0.00 0.00 0.00 4.52
96 97 2.364317 CCCCTCTCTCCTTCGCCA 60.364 66.667 0.00 0.00 0.00 5.69
97 98 3.855853 GCCCCTCTCTCCTTCGCC 61.856 72.222 0.00 0.00 0.00 5.54
98 99 4.214327 CGCCCCTCTCTCCTTCGC 62.214 72.222 0.00 0.00 0.00 4.70
99 100 2.756283 ACGCCCCTCTCTCCTTCG 60.756 66.667 0.00 0.00 0.00 3.79
100 101 2.776913 CGACGCCCCTCTCTCCTTC 61.777 68.421 0.00 0.00 0.00 3.46
101 102 2.756283 CGACGCCCCTCTCTCCTT 60.756 66.667 0.00 0.00 0.00 3.36
102 103 4.824515 CCGACGCCCCTCTCTCCT 62.825 72.222 0.00 0.00 0.00 3.69
104 105 3.827898 CACCGACGCCCCTCTCTC 61.828 72.222 0.00 0.00 0.00 3.20
131 132 2.808181 TAAAAACCGCCCTCCCTCGC 62.808 60.000 0.00 0.00 0.00 5.03
132 133 0.107361 ATAAAAACCGCCCTCCCTCG 60.107 55.000 0.00 0.00 0.00 4.63
133 134 2.847441 CTATAAAAACCGCCCTCCCTC 58.153 52.381 0.00 0.00 0.00 4.30
134 135 1.133884 GCTATAAAAACCGCCCTCCCT 60.134 52.381 0.00 0.00 0.00 4.20
135 136 1.315690 GCTATAAAAACCGCCCTCCC 58.684 55.000 0.00 0.00 0.00 4.30
136 137 0.942252 CGCTATAAAAACCGCCCTCC 59.058 55.000 0.00 0.00 0.00 4.30
137 138 0.942252 CCGCTATAAAAACCGCCCTC 59.058 55.000 0.00 0.00 0.00 4.30
138 139 1.099295 GCCGCTATAAAAACCGCCCT 61.099 55.000 0.00 0.00 0.00 5.19
139 140 1.357690 GCCGCTATAAAAACCGCCC 59.642 57.895 0.00 0.00 0.00 6.13
140 141 1.010462 CGCCGCTATAAAAACCGCC 60.010 57.895 0.00 0.00 0.00 6.13
141 142 0.042448 CTCGCCGCTATAAAAACCGC 60.042 55.000 0.00 0.00 0.00 5.68
142 143 1.005347 CACTCGCCGCTATAAAAACCG 60.005 52.381 0.00 0.00 0.00 4.44
143 144 1.329599 CCACTCGCCGCTATAAAAACC 59.670 52.381 0.00 0.00 0.00 3.27
144 145 2.030091 GTCCACTCGCCGCTATAAAAAC 59.970 50.000 0.00 0.00 0.00 2.43
145 146 2.273557 GTCCACTCGCCGCTATAAAAA 58.726 47.619 0.00 0.00 0.00 1.94
146 147 1.799917 CGTCCACTCGCCGCTATAAAA 60.800 52.381 0.00 0.00 0.00 1.52
147 148 0.248743 CGTCCACTCGCCGCTATAAA 60.249 55.000 0.00 0.00 0.00 1.40
148 149 1.357690 CGTCCACTCGCCGCTATAA 59.642 57.895 0.00 0.00 0.00 0.98
149 150 2.549198 CCGTCCACTCGCCGCTATA 61.549 63.158 0.00 0.00 0.00 1.31
150 151 3.900892 CCGTCCACTCGCCGCTAT 61.901 66.667 0.00 0.00 0.00 2.97
169 170 3.414700 CACTGTTGTCGCCCGCTC 61.415 66.667 0.00 0.00 0.00 5.03
170 171 4.235762 ACACTGTTGTCGCCCGCT 62.236 61.111 0.00 0.00 0.00 5.52
171 172 4.012895 CACACTGTTGTCGCCCGC 62.013 66.667 0.00 0.00 31.66 6.13
172 173 3.345808 CCACACTGTTGTCGCCCG 61.346 66.667 0.00 0.00 31.66 6.13
173 174 2.110213 TCCACACTGTTGTCGCCC 59.890 61.111 0.00 0.00 31.66 6.13
174 175 2.594962 CGTCCACACTGTTGTCGCC 61.595 63.158 0.00 0.00 31.66 5.54
175 176 2.928361 CGTCCACACTGTTGTCGC 59.072 61.111 0.00 0.00 31.66 5.19
176 177 1.221466 ATGCGTCCACACTGTTGTCG 61.221 55.000 0.00 0.00 31.66 4.35
177 178 0.235665 CATGCGTCCACACTGTTGTC 59.764 55.000 0.00 0.00 31.66 3.18
178 179 1.165907 CCATGCGTCCACACTGTTGT 61.166 55.000 0.00 0.00 35.84 3.32
179 180 1.575922 CCATGCGTCCACACTGTTG 59.424 57.895 0.00 0.00 0.00 3.33
180 181 2.260869 GCCATGCGTCCACACTGTT 61.261 57.895 0.00 0.00 0.00 3.16
181 182 2.669569 GCCATGCGTCCACACTGT 60.670 61.111 0.00 0.00 0.00 3.55
211 212 4.520846 CAATGAAGGCGCGCGTCC 62.521 66.667 33.08 30.17 0.00 4.79
219 220 2.486966 GAGTGGCGCAATGAAGGC 59.513 61.111 10.83 0.00 0.00 4.35
220 221 2.034879 ACGAGTGGCGCAATGAAGG 61.035 57.895 10.83 0.00 46.04 3.46
221 222 1.133253 CACGAGTGGCGCAATGAAG 59.867 57.895 10.83 0.00 46.04 3.02
222 223 1.291184 CTCACGAGTGGCGCAATGAA 61.291 55.000 10.83 0.00 46.04 2.57
223 224 1.737735 CTCACGAGTGGCGCAATGA 60.738 57.895 10.83 0.00 46.04 2.57
224 225 2.743752 CCTCACGAGTGGCGCAATG 61.744 63.158 10.83 0.00 46.04 2.82
225 226 2.434884 CCTCACGAGTGGCGCAAT 60.435 61.111 10.83 0.00 46.04 3.56
226 227 2.449031 ATTCCTCACGAGTGGCGCAA 62.449 55.000 10.83 0.00 46.04 4.85
227 228 2.835701 GATTCCTCACGAGTGGCGCA 62.836 60.000 10.83 0.00 46.04 6.09
228 229 2.125512 ATTCCTCACGAGTGGCGC 60.126 61.111 0.00 0.00 46.04 6.53
230 231 1.667724 CATTGATTCCTCACGAGTGGC 59.332 52.381 3.19 0.00 0.00 5.01
231 232 2.093500 TCCATTGATTCCTCACGAGTGG 60.093 50.000 3.19 0.00 0.00 4.00
232 233 3.251479 TCCATTGATTCCTCACGAGTG 57.749 47.619 0.00 0.00 0.00 3.51
233 234 3.369892 CCTTCCATTGATTCCTCACGAGT 60.370 47.826 0.00 0.00 0.00 4.18
234 235 3.201290 CCTTCCATTGATTCCTCACGAG 58.799 50.000 0.00 0.00 0.00 4.18
235 236 2.680805 GCCTTCCATTGATTCCTCACGA 60.681 50.000 0.00 0.00 0.00 4.35
236 237 1.672881 GCCTTCCATTGATTCCTCACG 59.327 52.381 0.00 0.00 0.00 4.35
237 238 2.686915 CAGCCTTCCATTGATTCCTCAC 59.313 50.000 0.00 0.00 0.00 3.51
238 239 2.357465 CCAGCCTTCCATTGATTCCTCA 60.357 50.000 0.00 0.00 0.00 3.86
239 240 2.305009 CCAGCCTTCCATTGATTCCTC 58.695 52.381 0.00 0.00 0.00 3.71
240 241 1.687368 GCCAGCCTTCCATTGATTCCT 60.687 52.381 0.00 0.00 0.00 3.36
241 242 0.749049 GCCAGCCTTCCATTGATTCC 59.251 55.000 0.00 0.00 0.00 3.01
242 243 0.749049 GGCCAGCCTTCCATTGATTC 59.251 55.000 0.00 0.00 0.00 2.52
243 244 1.039233 CGGCCAGCCTTCCATTGATT 61.039 55.000 2.24 0.00 0.00 2.57
244 245 1.454479 CGGCCAGCCTTCCATTGAT 60.454 57.895 2.24 0.00 0.00 2.57
245 246 2.045045 CGGCCAGCCTTCCATTGA 60.045 61.111 2.24 0.00 0.00 2.57
246 247 2.045045 TCGGCCAGCCTTCCATTG 60.045 61.111 2.24 0.00 0.00 2.82
247 248 2.044946 GTCGGCCAGCCTTCCATT 60.045 61.111 2.24 0.00 0.00 3.16
248 249 4.473520 CGTCGGCCAGCCTTCCAT 62.474 66.667 2.24 0.00 0.00 3.41
262 263 1.154225 CAATGCGAAGGTTGCCGTC 60.154 57.895 0.00 0.00 0.00 4.79
263 264 0.960364 ATCAATGCGAAGGTTGCCGT 60.960 50.000 0.00 0.00 0.00 5.68
264 265 0.171007 AATCAATGCGAAGGTTGCCG 59.829 50.000 0.00 0.00 0.00 5.69
265 266 1.469767 GGAATCAATGCGAAGGTTGCC 60.470 52.381 0.00 0.00 0.00 4.52
266 267 1.469767 GGGAATCAATGCGAAGGTTGC 60.470 52.381 0.00 0.00 0.00 4.17
267 268 1.202177 CGGGAATCAATGCGAAGGTTG 60.202 52.381 0.00 0.00 0.00 3.77
268 269 1.094785 CGGGAATCAATGCGAAGGTT 58.905 50.000 0.00 0.00 0.00 3.50
269 270 1.376609 GCGGGAATCAATGCGAAGGT 61.377 55.000 0.00 0.00 0.00 3.50
270 271 1.356624 GCGGGAATCAATGCGAAGG 59.643 57.895 0.00 0.00 0.00 3.46
271 272 0.028505 CTGCGGGAATCAATGCGAAG 59.971 55.000 0.00 0.00 0.00 3.79
272 273 1.375853 CCTGCGGGAATCAATGCGAA 61.376 55.000 5.28 0.00 33.58 4.70
273 274 1.819208 CCTGCGGGAATCAATGCGA 60.819 57.895 5.28 0.00 33.58 5.10
274 275 1.375853 TTCCTGCGGGAATCAATGCG 61.376 55.000 23.60 0.00 45.72 4.73
275 276 2.492418 TTCCTGCGGGAATCAATGC 58.508 52.632 23.60 0.00 45.72 3.56
283 284 2.345991 CCTCGTTTTCCTGCGGGA 59.654 61.111 11.27 11.27 40.36 5.14
284 285 3.431725 GCCTCGTTTTCCTGCGGG 61.432 66.667 4.71 4.71 0.00 6.13
285 286 3.788766 CGCCTCGTTTTCCTGCGG 61.789 66.667 0.00 0.00 41.42 5.69
286 287 2.100631 ATCGCCTCGTTTTCCTGCG 61.101 57.895 0.00 0.00 46.09 5.18
287 288 1.019278 TCATCGCCTCGTTTTCCTGC 61.019 55.000 0.00 0.00 0.00 4.85
288 289 1.002366 CTCATCGCCTCGTTTTCCTG 58.998 55.000 0.00 0.00 0.00 3.86
289 290 0.108138 CCTCATCGCCTCGTTTTCCT 60.108 55.000 0.00 0.00 0.00 3.36
290 291 0.108329 TCCTCATCGCCTCGTTTTCC 60.108 55.000 0.00 0.00 0.00 3.13
291 292 1.000145 GTCCTCATCGCCTCGTTTTC 59.000 55.000 0.00 0.00 0.00 2.29
292 293 0.736325 CGTCCTCATCGCCTCGTTTT 60.736 55.000 0.00 0.00 0.00 2.43
293 294 1.153823 CGTCCTCATCGCCTCGTTT 60.154 57.895 0.00 0.00 0.00 3.60
294 295 2.044555 TCGTCCTCATCGCCTCGTT 61.045 57.895 0.00 0.00 0.00 3.85
295 296 2.437895 TCGTCCTCATCGCCTCGT 60.438 61.111 0.00 0.00 0.00 4.18
296 297 2.024871 GTCGTCCTCATCGCCTCG 59.975 66.667 0.00 0.00 0.00 4.63
297 298 1.989966 TTCGTCGTCCTCATCGCCTC 61.990 60.000 0.00 0.00 0.00 4.70
298 299 1.994507 CTTCGTCGTCCTCATCGCCT 61.995 60.000 0.00 0.00 0.00 5.52
299 300 1.586564 CTTCGTCGTCCTCATCGCC 60.587 63.158 0.00 0.00 0.00 5.54
300 301 1.586564 CCTTCGTCGTCCTCATCGC 60.587 63.158 0.00 0.00 0.00 4.58
301 302 1.064296 CCCTTCGTCGTCCTCATCG 59.936 63.158 0.00 0.00 0.00 3.84
302 303 1.437986 CCCCTTCGTCGTCCTCATC 59.562 63.158 0.00 0.00 0.00 2.92
303 304 2.722201 GCCCCTTCGTCGTCCTCAT 61.722 63.158 0.00 0.00 0.00 2.90
304 305 3.379445 GCCCCTTCGTCGTCCTCA 61.379 66.667 0.00 0.00 0.00 3.86
305 306 4.144703 GGCCCCTTCGTCGTCCTC 62.145 72.222 0.00 0.00 0.00 3.71
308 309 4.452733 CTGGGCCCCTTCGTCGTC 62.453 72.222 22.27 0.00 0.00 4.20
329 330 4.436998 GTGGACCCGCCGAGTCAG 62.437 72.222 0.14 0.00 40.66 3.51
337 338 4.660938 AAAGCCTGGTGGACCCGC 62.661 66.667 0.00 0.00 35.15 6.13
338 339 2.115266 AAAAGCCTGGTGGACCCG 59.885 61.111 0.00 0.00 35.15 5.28
339 340 2.574018 GCAAAAGCCTGGTGGACCC 61.574 63.158 0.00 0.00 34.57 4.46
340 341 2.919494 CGCAAAAGCCTGGTGGACC 61.919 63.158 0.00 0.00 34.57 4.46
341 342 2.644992 CGCAAAAGCCTGGTGGAC 59.355 61.111 0.00 0.00 34.57 4.02
342 343 3.294493 GCGCAAAAGCCTGGTGGA 61.294 61.111 0.30 0.00 34.57 4.02
350 351 2.823196 AAACTTTTTGGCGCAAAAGC 57.177 40.000 24.78 3.52 42.91 3.51
351 352 3.373748 AGGAAAACTTTTTGGCGCAAAAG 59.626 39.130 23.78 23.78 42.91 2.27
352 353 3.339141 AGGAAAACTTTTTGGCGCAAAA 58.661 36.364 10.83 8.15 40.85 2.44
353 354 2.933260 GAGGAAAACTTTTTGGCGCAAA 59.067 40.909 10.83 0.00 0.00 3.68
354 355 2.545731 GAGGAAAACTTTTTGGCGCAA 58.454 42.857 10.83 0.00 0.00 4.85
355 356 1.535015 CGAGGAAAACTTTTTGGCGCA 60.535 47.619 10.83 0.00 0.00 6.09
356 357 1.128513 CGAGGAAAACTTTTTGGCGC 58.871 50.000 0.00 0.00 0.00 6.53
357 358 1.766069 CCGAGGAAAACTTTTTGGCG 58.234 50.000 0.00 0.00 0.00 5.69
358 359 1.497991 GCCGAGGAAAACTTTTTGGC 58.502 50.000 0.00 0.00 31.32 4.52
359 360 1.766069 CGCCGAGGAAAACTTTTTGG 58.234 50.000 0.00 0.00 0.00 3.28
360 361 1.128513 GCGCCGAGGAAAACTTTTTG 58.871 50.000 0.00 0.00 0.00 2.44
361 362 0.031585 GGCGCCGAGGAAAACTTTTT 59.968 50.000 12.58 0.00 0.00 1.94
362 363 1.658114 GGCGCCGAGGAAAACTTTT 59.342 52.632 12.58 0.00 0.00 2.27
363 364 2.265904 GGGCGCCGAGGAAAACTTT 61.266 57.895 22.54 0.00 0.00 2.66
364 365 2.671963 GGGCGCCGAGGAAAACTT 60.672 61.111 22.54 0.00 0.00 2.66
365 366 4.717313 GGGGCGCCGAGGAAAACT 62.717 66.667 22.54 0.00 0.00 2.66
409 410 4.547367 GGATCCAGGCCGAACCCG 62.547 72.222 6.95 0.00 40.58 5.28
418 419 4.530857 GGTGCCGACGGATCCAGG 62.531 72.222 20.50 12.73 0.00 4.45
419 420 2.593468 ATTGGTGCCGACGGATCCAG 62.593 60.000 20.50 7.30 31.41 3.86
420 421 2.191786 AATTGGTGCCGACGGATCCA 62.192 55.000 20.50 20.87 0.00 3.41
421 422 1.029947 AAATTGGTGCCGACGGATCC 61.030 55.000 20.50 18.46 0.00 3.36
422 423 0.377203 GAAATTGGTGCCGACGGATC 59.623 55.000 20.50 9.18 0.00 3.36
423 424 1.366111 CGAAATTGGTGCCGACGGAT 61.366 55.000 20.50 0.00 0.00 4.18
424 425 2.030401 CGAAATTGGTGCCGACGGA 61.030 57.895 20.50 0.00 0.00 4.69
425 426 2.030401 TCGAAATTGGTGCCGACGG 61.030 57.895 10.29 10.29 0.00 4.79
426 427 1.131826 GTCGAAATTGGTGCCGACG 59.868 57.895 0.00 0.00 41.22 5.12
428 429 1.673009 GGGTCGAAATTGGTGCCGA 60.673 57.895 0.00 0.00 0.00 5.54
429 430 0.391927 TAGGGTCGAAATTGGTGCCG 60.392 55.000 0.00 0.00 0.00 5.69
430 431 1.471287 GTTAGGGTCGAAATTGGTGCC 59.529 52.381 0.00 0.00 0.00 5.01
431 432 1.471287 GGTTAGGGTCGAAATTGGTGC 59.529 52.381 0.00 0.00 0.00 5.01
432 433 1.735571 CGGTTAGGGTCGAAATTGGTG 59.264 52.381 0.00 0.00 0.00 4.17
433 434 1.339342 CCGGTTAGGGTCGAAATTGGT 60.339 52.381 0.00 0.00 35.97 3.67
434 435 1.375551 CCGGTTAGGGTCGAAATTGG 58.624 55.000 0.00 0.00 35.97 3.16
435 436 0.730840 GCCGGTTAGGGTCGAAATTG 59.269 55.000 1.90 0.00 41.48 2.32
436 437 0.741927 CGCCGGTTAGGGTCGAAATT 60.742 55.000 1.90 0.00 41.48 1.82
437 438 1.153509 CGCCGGTTAGGGTCGAAAT 60.154 57.895 1.90 0.00 41.48 2.17
438 439 1.814772 TTCGCCGGTTAGGGTCGAAA 61.815 55.000 1.90 0.00 40.22 3.46
439 440 1.606885 ATTCGCCGGTTAGGGTCGAA 61.607 55.000 12.14 12.14 43.91 3.71
440 441 0.751277 TATTCGCCGGTTAGGGTCGA 60.751 55.000 1.90 0.00 41.48 4.20
441 442 0.316204 ATATTCGCCGGTTAGGGTCG 59.684 55.000 1.90 0.00 41.48 4.79
442 443 2.140717 CAATATTCGCCGGTTAGGGTC 58.859 52.381 1.90 0.00 41.48 4.46
443 444 1.202722 CCAATATTCGCCGGTTAGGGT 60.203 52.381 1.90 0.00 41.48 4.34
444 445 1.519408 CCAATATTCGCCGGTTAGGG 58.481 55.000 1.90 0.00 41.48 3.53
445 446 1.519408 CCCAATATTCGCCGGTTAGG 58.481 55.000 1.90 0.00 44.97 2.69
446 447 0.872388 GCCCAATATTCGCCGGTTAG 59.128 55.000 1.90 0.00 0.00 2.34
447 448 0.470766 AGCCCAATATTCGCCGGTTA 59.529 50.000 1.90 0.00 0.00 2.85
448 449 0.395173 AAGCCCAATATTCGCCGGTT 60.395 50.000 1.90 0.00 0.00 4.44
449 450 0.818040 GAAGCCCAATATTCGCCGGT 60.818 55.000 1.90 0.00 0.00 5.28
450 451 0.535102 AGAAGCCCAATATTCGCCGG 60.535 55.000 0.00 0.00 0.00 6.13
451 452 0.588252 CAGAAGCCCAATATTCGCCG 59.412 55.000 1.27 0.00 0.00 6.46
452 453 0.954452 CCAGAAGCCCAATATTCGCC 59.046 55.000 1.27 0.00 0.00 5.54
453 454 1.876156 CTCCAGAAGCCCAATATTCGC 59.124 52.381 0.00 0.00 0.00 4.70
454 455 2.498167 CCTCCAGAAGCCCAATATTCG 58.502 52.381 0.00 0.00 0.00 3.34
455 456 2.234143 GCCTCCAGAAGCCCAATATTC 58.766 52.381 0.00 0.00 0.00 1.75
456 457 1.570501 TGCCTCCAGAAGCCCAATATT 59.429 47.619 0.00 0.00 0.00 1.28
457 458 1.133668 GTGCCTCCAGAAGCCCAATAT 60.134 52.381 0.00 0.00 0.00 1.28
458 459 0.255890 GTGCCTCCAGAAGCCCAATA 59.744 55.000 0.00 0.00 0.00 1.90
459 460 1.000396 GTGCCTCCAGAAGCCCAAT 60.000 57.895 0.00 0.00 0.00 3.16
460 461 2.436109 GTGCCTCCAGAAGCCCAA 59.564 61.111 0.00 0.00 0.00 4.12
461 462 4.020617 CGTGCCTCCAGAAGCCCA 62.021 66.667 0.00 0.00 0.00 5.36
462 463 3.672295 CTCGTGCCTCCAGAAGCCC 62.672 68.421 0.00 0.00 0.00 5.19
463 464 1.605058 TACTCGTGCCTCCAGAAGCC 61.605 60.000 0.00 0.00 0.00 4.35
464 465 0.179124 CTACTCGTGCCTCCAGAAGC 60.179 60.000 0.00 0.00 0.00 3.86
465 466 0.457851 CCTACTCGTGCCTCCAGAAG 59.542 60.000 0.00 0.00 0.00 2.85
466 467 1.605058 GCCTACTCGTGCCTCCAGAA 61.605 60.000 0.00 0.00 0.00 3.02
467 468 2.052690 GCCTACTCGTGCCTCCAGA 61.053 63.158 0.00 0.00 0.00 3.86
468 469 2.496817 GCCTACTCGTGCCTCCAG 59.503 66.667 0.00 0.00 0.00 3.86
469 470 3.075005 GGCCTACTCGTGCCTCCA 61.075 66.667 0.00 0.00 44.46 3.86
474 475 3.267483 TGAAAAATAGGCCTACTCGTGC 58.733 45.455 16.61 4.05 0.00 5.34
475 476 4.201822 GCTTGAAAAATAGGCCTACTCGTG 60.202 45.833 16.61 7.46 0.00 4.35
476 477 3.939592 GCTTGAAAAATAGGCCTACTCGT 59.060 43.478 16.61 0.45 0.00 4.18
477 478 3.312697 GGCTTGAAAAATAGGCCTACTCG 59.687 47.826 16.61 0.00 39.68 4.18
478 479 3.312697 CGGCTTGAAAAATAGGCCTACTC 59.687 47.826 16.61 10.09 40.52 2.59
479 480 3.279434 CGGCTTGAAAAATAGGCCTACT 58.721 45.455 16.61 0.00 40.52 2.57
480 481 2.357952 CCGGCTTGAAAAATAGGCCTAC 59.642 50.000 16.61 2.00 40.52 3.18
481 482 2.650322 CCGGCTTGAAAAATAGGCCTA 58.350 47.619 16.60 16.60 40.52 3.93
482 483 1.474330 CCGGCTTGAAAAATAGGCCT 58.526 50.000 11.78 11.78 40.52 5.19
483 484 0.179111 GCCGGCTTGAAAAATAGGCC 60.179 55.000 22.15 0.00 39.43 5.19
484 485 0.525455 CGCCGGCTTGAAAAATAGGC 60.525 55.000 26.68 0.00 35.82 3.93
485 486 0.525455 GCGCCGGCTTGAAAAATAGG 60.525 55.000 26.68 4.89 35.83 2.57
486 487 2.943929 GCGCCGGCTTGAAAAATAG 58.056 52.632 26.68 5.48 35.83 1.73
507 508 1.229820 GGCCCCCAATCCCCTTTTT 60.230 57.895 0.00 0.00 0.00 1.94
508 509 2.181523 GAGGCCCCCAATCCCCTTTT 62.182 60.000 0.00 0.00 0.00 2.27
509 510 2.540640 AGGCCCCCAATCCCCTTT 60.541 61.111 0.00 0.00 0.00 3.11
510 511 3.029981 GAGGCCCCCAATCCCCTT 61.030 66.667 0.00 0.00 0.00 3.95
511 512 3.620680 AAGAGGCCCCCAATCCCCT 62.621 63.158 0.00 0.00 0.00 4.79
512 513 3.029981 AAGAGGCCCCCAATCCCC 61.030 66.667 0.00 0.00 0.00 4.81
513 514 2.280079 CAAGAGGCCCCCAATCCC 59.720 66.667 0.00 0.00 0.00 3.85
514 515 2.280079 CCAAGAGGCCCCCAATCC 59.720 66.667 0.00 0.00 0.00 3.01
515 516 2.280079 CCCAAGAGGCCCCCAATC 59.720 66.667 0.00 0.00 0.00 2.67
516 517 3.358824 CCCCAAGAGGCCCCCAAT 61.359 66.667 0.00 0.00 0.00 3.16
531 532 2.514824 GCATCTCAACTCGCCCCC 60.515 66.667 0.00 0.00 0.00 5.40
532 533 1.522580 GAGCATCTCAACTCGCCCC 60.523 63.158 0.00 0.00 0.00 5.80
533 534 4.116878 GAGCATCTCAACTCGCCC 57.883 61.111 0.00 0.00 0.00 6.13
537 538 1.470632 CCACCTCGAGCATCTCAACTC 60.471 57.143 6.99 0.00 0.00 3.01
538 539 0.534412 CCACCTCGAGCATCTCAACT 59.466 55.000 6.99 0.00 0.00 3.16
539 540 1.086634 GCCACCTCGAGCATCTCAAC 61.087 60.000 6.99 0.00 0.00 3.18
540 541 1.219124 GCCACCTCGAGCATCTCAA 59.781 57.895 6.99 0.00 0.00 3.02
541 542 2.725312 GGCCACCTCGAGCATCTCA 61.725 63.158 6.99 0.00 0.00 3.27
542 543 2.037620 ATGGCCACCTCGAGCATCTC 62.038 60.000 8.16 0.00 0.00 2.75
543 544 2.068821 ATGGCCACCTCGAGCATCT 61.069 57.895 8.16 0.00 0.00 2.90
544 545 1.890979 CATGGCCACCTCGAGCATC 60.891 63.158 8.16 0.00 0.00 3.91
545 546 2.191375 CATGGCCACCTCGAGCAT 59.809 61.111 8.16 1.44 0.00 3.79
546 547 4.783621 GCATGGCCACCTCGAGCA 62.784 66.667 8.16 0.00 0.00 4.26
547 548 4.783621 TGCATGGCCACCTCGAGC 62.784 66.667 8.16 6.37 0.00 5.03
548 549 2.184830 CATGCATGGCCACCTCGAG 61.185 63.158 19.40 5.13 0.00 4.04
549 550 2.124612 CATGCATGGCCACCTCGA 60.125 61.111 19.40 0.00 0.00 4.04
550 551 3.896133 GCATGCATGGCCACCTCG 61.896 66.667 27.34 0.00 0.00 4.63
551 552 2.131709 ATGCATGCATGGCCACCTC 61.132 57.895 31.74 9.80 35.03 3.85
552 553 2.042333 ATGCATGCATGGCCACCT 60.042 55.556 31.74 6.34 35.03 4.00
562 563 6.207928 TGTATTAATTACAGCACATGCATGC 58.792 36.000 26.53 15.62 46.50 4.06
563 564 8.696175 CAATGTATTAATTACAGCACATGCATG 58.304 33.333 25.09 25.09 43.87 4.06
564 565 7.868922 CCAATGTATTAATTACAGCACATGCAT 59.131 33.333 6.64 0.00 43.87 3.96
565 566 7.147932 ACCAATGTATTAATTACAGCACATGCA 60.148 33.333 6.64 0.00 43.87 3.96
566 567 7.202526 ACCAATGTATTAATTACAGCACATGC 58.797 34.615 0.00 0.00 43.87 4.06
622 623 9.695526 TCGTAGTTTGCAGAAGTACTTAATTAA 57.304 29.630 8.42 0.00 0.00 1.40
623 624 9.695526 TTCGTAGTTTGCAGAAGTACTTAATTA 57.304 29.630 8.42 0.00 0.00 1.40
624 625 8.597662 TTCGTAGTTTGCAGAAGTACTTAATT 57.402 30.769 8.42 0.00 0.00 1.40
625 626 8.597662 TTTCGTAGTTTGCAGAAGTACTTAAT 57.402 30.769 8.42 0.00 0.00 1.40
626 627 8.597662 ATTTCGTAGTTTGCAGAAGTACTTAA 57.402 30.769 8.42 0.00 0.00 1.85
627 628 8.597662 AATTTCGTAGTTTGCAGAAGTACTTA 57.402 30.769 8.42 0.00 0.00 2.24
628 629 7.492352 AATTTCGTAGTTTGCAGAAGTACTT 57.508 32.000 8.13 8.13 0.00 2.24
629 630 8.597662 TTAATTTCGTAGTTTGCAGAAGTACT 57.402 30.769 17.12 0.00 0.00 2.73
630 631 9.821662 AATTAATTTCGTAGTTTGCAGAAGTAC 57.178 29.630 12.72 12.72 0.00 2.73
632 633 9.394477 GAAATTAATTTCGTAGTTTGCAGAAGT 57.606 29.630 21.78 0.00 37.09 3.01
633 634 9.393249 TGAAATTAATTTCGTAGTTTGCAGAAG 57.607 29.630 27.49 0.00 46.92 2.85
634 635 9.906660 ATGAAATTAATTTCGTAGTTTGCAGAA 57.093 25.926 26.84 11.09 46.92 3.02
635 636 9.554724 GATGAAATTAATTTCGTAGTTTGCAGA 57.445 29.630 27.63 11.85 46.92 4.26
636 637 9.340695 TGATGAAATTAATTTCGTAGTTTGCAG 57.659 29.630 27.63 0.00 46.92 4.41
637 638 9.853555 ATGATGAAATTAATTTCGTAGTTTGCA 57.146 25.926 27.63 21.42 46.92 4.08
658 659 9.127006 CGTCAACTAAGATAGATGAGAATGATG 57.873 37.037 0.00 0.00 38.11 3.07
659 660 8.303156 CCGTCAACTAAGATAGATGAGAATGAT 58.697 37.037 0.00 0.00 38.11 2.45
660 661 7.255625 CCCGTCAACTAAGATAGATGAGAATGA 60.256 40.741 0.00 0.00 38.11 2.57
661 662 6.865726 CCCGTCAACTAAGATAGATGAGAATG 59.134 42.308 0.00 0.00 38.11 2.67
662 663 6.778069 TCCCGTCAACTAAGATAGATGAGAAT 59.222 38.462 0.00 0.00 38.11 2.40
663 664 6.127101 TCCCGTCAACTAAGATAGATGAGAA 58.873 40.000 0.00 0.00 38.11 2.87
664 665 5.691896 TCCCGTCAACTAAGATAGATGAGA 58.308 41.667 0.00 0.00 38.11 3.27
665 666 6.582677 ATCCCGTCAACTAAGATAGATGAG 57.417 41.667 0.00 0.00 38.11 2.90
666 667 6.978674 AATCCCGTCAACTAAGATAGATGA 57.021 37.500 0.00 0.00 35.57 2.92
667 668 7.096023 CGAAAATCCCGTCAACTAAGATAGATG 60.096 40.741 0.00 0.00 0.00 2.90
668 669 6.924060 CGAAAATCCCGTCAACTAAGATAGAT 59.076 38.462 0.00 0.00 0.00 1.98
669 670 6.095860 TCGAAAATCCCGTCAACTAAGATAGA 59.904 38.462 0.00 0.00 0.00 1.98
670 671 6.270815 TCGAAAATCCCGTCAACTAAGATAG 58.729 40.000 0.00 0.00 0.00 2.08
671 672 6.211587 TCGAAAATCCCGTCAACTAAGATA 57.788 37.500 0.00 0.00 0.00 1.98
672 673 5.080969 TCGAAAATCCCGTCAACTAAGAT 57.919 39.130 0.00 0.00 0.00 2.40
673 674 4.524316 TCGAAAATCCCGTCAACTAAGA 57.476 40.909 0.00 0.00 0.00 2.10
674 675 5.796350 ATTCGAAAATCCCGTCAACTAAG 57.204 39.130 0.00 0.00 0.00 2.18
675 676 7.624764 GCTTAATTCGAAAATCCCGTCAACTAA 60.625 37.037 0.00 0.00 0.00 2.24
676 677 6.183360 GCTTAATTCGAAAATCCCGTCAACTA 60.183 38.462 0.00 0.00 0.00 2.24
677 678 5.391629 GCTTAATTCGAAAATCCCGTCAACT 60.392 40.000 0.00 0.00 0.00 3.16
678 679 4.791676 GCTTAATTCGAAAATCCCGTCAAC 59.208 41.667 0.00 0.00 0.00 3.18
679 680 4.142556 GGCTTAATTCGAAAATCCCGTCAA 60.143 41.667 0.00 0.00 0.00 3.18
680 681 3.375922 GGCTTAATTCGAAAATCCCGTCA 59.624 43.478 0.00 0.00 0.00 4.35
681 682 3.626217 AGGCTTAATTCGAAAATCCCGTC 59.374 43.478 0.00 0.00 0.00 4.79
682 683 3.617284 AGGCTTAATTCGAAAATCCCGT 58.383 40.909 0.00 0.00 0.00 5.28
683 684 4.142469 ACAAGGCTTAATTCGAAAATCCCG 60.142 41.667 0.00 0.00 0.00 5.14
684 685 5.324784 ACAAGGCTTAATTCGAAAATCCC 57.675 39.130 0.00 0.00 0.00 3.85
685 686 8.926715 ATTTACAAGGCTTAATTCGAAAATCC 57.073 30.769 0.00 0.00 0.00 3.01
686 687 9.788960 AGATTTACAAGGCTTAATTCGAAAATC 57.211 29.630 0.00 2.19 32.46 2.17
687 688 9.573133 CAGATTTACAAGGCTTAATTCGAAAAT 57.427 29.630 0.00 0.00 0.00 1.82
688 689 8.788806 TCAGATTTACAAGGCTTAATTCGAAAA 58.211 29.630 0.00 0.00 0.00 2.29
689 690 8.330466 TCAGATTTACAAGGCTTAATTCGAAA 57.670 30.769 0.00 0.00 0.00 3.46
690 691 7.915293 TCAGATTTACAAGGCTTAATTCGAA 57.085 32.000 0.00 0.00 0.00 3.71
691 692 7.915293 TTCAGATTTACAAGGCTTAATTCGA 57.085 32.000 0.00 0.00 0.00 3.71
692 693 7.698130 CCTTTCAGATTTACAAGGCTTAATTCG 59.302 37.037 0.00 0.00 29.71 3.34
693 694 8.523658 ACCTTTCAGATTTACAAGGCTTAATTC 58.476 33.333 0.00 0.00 39.68 2.17
694 695 8.306761 CACCTTTCAGATTTACAAGGCTTAATT 58.693 33.333 0.00 0.00 39.68 1.40
695 696 7.093771 CCACCTTTCAGATTTACAAGGCTTAAT 60.094 37.037 0.00 0.00 39.68 1.40
696 697 6.208599 CCACCTTTCAGATTTACAAGGCTTAA 59.791 38.462 0.00 0.00 39.68 1.85
697 698 5.710099 CCACCTTTCAGATTTACAAGGCTTA 59.290 40.000 0.00 0.00 39.68 3.09
698 699 4.524328 CCACCTTTCAGATTTACAAGGCTT 59.476 41.667 0.00 0.00 39.68 4.35
699 700 4.082125 CCACCTTTCAGATTTACAAGGCT 58.918 43.478 0.00 0.00 39.68 4.58
700 701 4.079253 TCCACCTTTCAGATTTACAAGGC 58.921 43.478 0.00 0.00 39.68 4.35
701 702 5.770162 ACTTCCACCTTTCAGATTTACAAGG 59.230 40.000 0.00 0.00 41.52 3.61
702 703 6.884280 ACTTCCACCTTTCAGATTTACAAG 57.116 37.500 0.00 0.00 0.00 3.16
703 704 6.425721 CGTACTTCCACCTTTCAGATTTACAA 59.574 38.462 0.00 0.00 0.00 2.41
704 705 5.929992 CGTACTTCCACCTTTCAGATTTACA 59.070 40.000 0.00 0.00 0.00 2.41
705 706 5.930569 ACGTACTTCCACCTTTCAGATTTAC 59.069 40.000 0.00 0.00 0.00 2.01
706 707 6.105397 ACGTACTTCCACCTTTCAGATTTA 57.895 37.500 0.00 0.00 0.00 1.40
707 708 4.969484 ACGTACTTCCACCTTTCAGATTT 58.031 39.130 0.00 0.00 0.00 2.17
708 709 4.618920 ACGTACTTCCACCTTTCAGATT 57.381 40.909 0.00 0.00 0.00 2.40
709 710 5.421056 TGATACGTACTTCCACCTTTCAGAT 59.579 40.000 0.00 0.00 0.00 2.90
710 711 4.768448 TGATACGTACTTCCACCTTTCAGA 59.232 41.667 0.00 0.00 0.00 3.27
711 712 4.863131 GTGATACGTACTTCCACCTTTCAG 59.137 45.833 0.00 0.00 0.00 3.02
712 713 4.281435 TGTGATACGTACTTCCACCTTTCA 59.719 41.667 0.00 0.00 0.00 2.69
713 714 4.624452 GTGTGATACGTACTTCCACCTTTC 59.376 45.833 0.00 0.00 0.00 2.62
714 715 4.039488 TGTGTGATACGTACTTCCACCTTT 59.961 41.667 0.00 0.00 0.00 3.11
715 716 3.575256 TGTGTGATACGTACTTCCACCTT 59.425 43.478 0.00 0.00 0.00 3.50
716 717 3.159472 TGTGTGATACGTACTTCCACCT 58.841 45.455 0.00 0.00 0.00 4.00
717 718 3.581024 TGTGTGATACGTACTTCCACC 57.419 47.619 0.00 0.37 0.00 4.61
718 719 5.910637 TTTTGTGTGATACGTACTTCCAC 57.089 39.130 0.00 4.96 0.00 4.02
719 720 5.106869 GCATTTTGTGTGATACGTACTTCCA 60.107 40.000 0.00 0.00 0.00 3.53
720 721 5.321516 GCATTTTGTGTGATACGTACTTCC 58.678 41.667 0.00 0.00 0.00 3.46
721 722 5.121768 AGGCATTTTGTGTGATACGTACTTC 59.878 40.000 0.00 0.00 0.00 3.01
722 723 5.001232 AGGCATTTTGTGTGATACGTACTT 58.999 37.500 0.00 0.00 0.00 2.24
727 728 3.919804 CCAAAGGCATTTTGTGTGATACG 59.080 43.478 0.00 0.00 43.78 3.06
728 729 5.132897 TCCAAAGGCATTTTGTGTGATAC 57.867 39.130 0.00 0.00 43.78 2.24
734 735 4.261578 AGACATCCAAAGGCATTTTGTG 57.738 40.909 4.52 2.12 43.78 3.33
793 796 4.361971 TCTCTCGGGGGAGCACGT 62.362 66.667 0.00 0.00 33.70 4.49
908 911 0.899019 GAGGCCGAGAAGAAAGGAGT 59.101 55.000 0.00 0.00 0.00 3.85
976 979 4.947147 AAACTCGCCGCTGCCCAA 62.947 61.111 0.00 0.00 0.00 4.12
1027 1030 1.458588 ATCTTCTCCTCCTCCCCGC 60.459 63.158 0.00 0.00 0.00 6.13
1470 1473 2.202492 CAGCGGAGAAGGTCGACG 60.202 66.667 9.92 0.00 0.00 5.12
1529 1532 2.820767 GAAGTGGTCGAGGTGGCGAG 62.821 65.000 0.00 0.00 41.49 5.03
1550 1553 2.670148 CCCTCGGGCTGCTTAAGGT 61.670 63.158 4.29 0.00 0.00 3.50
1662 1665 0.909610 AGCTCACCGGAAATGGGAGA 60.910 55.000 9.46 0.00 31.65 3.71
1968 1971 3.572682 CCCTGAGTACAACTGTCTGTGTA 59.427 47.826 0.00 0.00 0.00 2.90
2031 2034 2.357009 CCTGATAGCAACAAGTGGATGC 59.643 50.000 0.00 0.00 40.34 3.91
2183 2186 5.104776 TGCACTAAGAATCAACTGAGCCTAT 60.105 40.000 0.00 0.00 0.00 2.57
2192 2195 5.412594 TCATTCAGGTGCACTAAGAATCAAC 59.587 40.000 17.98 0.00 0.00 3.18
2338 2341 6.966534 AGATCTTGGAAAAAGAAAGCTTCA 57.033 33.333 0.00 0.00 31.82 3.02
2352 2355 4.774726 AGAGAGCTGTGTAAAGATCTTGGA 59.225 41.667 9.17 0.00 42.82 3.53
2391 2394 6.472163 CGATATAAACAAATTGTTCTGTGGGC 59.528 38.462 12.11 0.00 40.14 5.36
2416 2419 7.425577 AAAGAAAAGCAAAATATGAGGCAAC 57.574 32.000 0.00 0.00 0.00 4.17
2460 2463 9.358872 GAGTAATTCCATTTTTCAATCTCCAAC 57.641 33.333 0.00 0.00 0.00 3.77
2720 2781 2.287608 CCCTCCGTTTCAAAAGAACTGC 60.288 50.000 0.00 0.00 0.00 4.40
2958 3021 5.693555 GGAAAATGAAAGTTGCTCTTCCAAG 59.306 40.000 4.97 0.00 35.02 3.61
2970 3033 2.699846 TGGCTGCAAGGAAAATGAAAGT 59.300 40.909 0.50 0.00 0.00 2.66
3041 3104 6.544928 AAAGGAAAAGACCATTGAAGTTGT 57.455 33.333 0.00 0.00 0.00 3.32
3143 3206 8.897872 AATTGTTCAGATCTGATTTGCTTTTT 57.102 26.923 25.64 9.20 39.64 1.94
3145 3208 9.798994 GATAATTGTTCAGATCTGATTTGCTTT 57.201 29.630 25.64 15.86 39.64 3.51
3146 3209 9.186837 AGATAATTGTTCAGATCTGATTTGCTT 57.813 29.630 25.64 16.62 39.64 3.91
3147 3210 8.749026 AGATAATTGTTCAGATCTGATTTGCT 57.251 30.769 25.64 13.55 39.64 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.