Multiple sequence alignment - TraesCS1D01G078000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G078000 chr1D 100.000 6552 0 0 1 6552 59971493 59964942 0.000000e+00 12100.0
1 TraesCS1D01G078000 chr1D 74.522 471 91 20 5501 5964 30420351 30419903 1.880000e-40 178.0
2 TraesCS1D01G078000 chr1D 80.702 171 27 3 664 832 472915839 472915673 1.920000e-25 128.0
3 TraesCS1D01G078000 chr1B 93.619 2727 141 18 1994 4701 95740628 95737916 0.000000e+00 4041.0
4 TraesCS1D01G078000 chr1B 90.047 1477 82 35 4699 6151 95737836 95736401 0.000000e+00 1853.0
5 TraesCS1D01G078000 chr1B 85.294 1666 121 56 6 1599 95748390 95746777 0.000000e+00 1605.0
6 TraesCS1D01G078000 chr1B 93.701 254 15 1 1678 1931 95746661 95746409 4.790000e-101 379.0
7 TraesCS1D01G078000 chr1B 76.053 451 83 18 5498 5934 111922027 111922466 1.850000e-50 211.0
8 TraesCS1D01G078000 chr1B 78.261 184 34 3 668 849 657416217 657416038 5.370000e-21 113.0
9 TraesCS1D01G078000 chr1B 85.714 84 5 3 6417 6493 95736385 95736302 1.510000e-11 82.4
10 TraesCS1D01G078000 chr1B 100.000 43 0 0 6499 6541 95736260 95736218 5.450000e-11 80.5
11 TraesCS1D01G078000 chr1A 93.062 2609 119 25 2126 4701 58752037 58749458 0.000000e+00 3759.0
12 TraesCS1D01G078000 chr1A 85.949 2256 164 61 3 2130 58754289 58752059 0.000000e+00 2268.0
13 TraesCS1D01G078000 chr1A 91.405 1466 100 13 4700 6156 58749376 58747928 0.000000e+00 1986.0
14 TraesCS1D01G078000 chr1A 80.117 171 28 3 664 832 566648255 566648089 8.920000e-24 122.0
15 TraesCS1D01G078000 chr1A 92.405 79 6 0 6417 6495 58747575 58747497 5.370000e-21 113.0
16 TraesCS1D01G078000 chr4A 93.103 145 10 0 6271 6415 74604713 74604857 5.150000e-51 213.0
17 TraesCS1D01G078000 chr4A 91.034 145 13 0 6271 6415 213403305 213403449 5.180000e-46 196.0
18 TraesCS1D01G078000 chr4A 78.107 169 26 7 689 852 670845383 670845221 5.410000e-16 97.1
19 TraesCS1D01G078000 chr4A 93.878 49 2 1 6209 6257 74604680 74604727 9.110000e-09 73.1
20 TraesCS1D01G078000 chr3D 93.151 146 8 2 6271 6415 55752432 55752288 5.150000e-51 213.0
21 TraesCS1D01G078000 chr3D 80.822 146 20 8 5504 5642 613752890 613752746 2.500000e-19 108.0
22 TraesCS1D01G078000 chr2D 90.411 146 14 0 6271 6416 608375823 608375678 6.700000e-45 193.0
23 TraesCS1D01G078000 chr2B 91.473 129 11 0 6286 6414 741499582 741499454 1.880000e-40 178.0
24 TraesCS1D01G078000 chr2B 78.736 174 26 7 676 839 403563098 403563270 8.990000e-19 106.0
25 TraesCS1D01G078000 chr2B 80.000 145 25 4 5501 5642 775167237 775167380 3.230000e-18 104.0
26 TraesCS1D01G078000 chr6B 82.707 133 19 4 5504 5634 13824944 13824814 1.490000e-21 115.0
27 TraesCS1D01G078000 chr6B 79.710 138 25 3 5846 5982 697695174 697695309 5.410000e-16 97.1
28 TraesCS1D01G078000 chr7A 79.747 158 27 2 675 830 127578402 127578248 6.950000e-20 110.0
29 TraesCS1D01G078000 chr3A 72.662 417 78 25 5501 5902 568646658 568647053 8.990000e-19 106.0
30 TraesCS1D01G078000 chr6D 79.710 138 25 3 5846 5982 458727909 458728044 5.410000e-16 97.1
31 TraesCS1D01G078000 chr6D 95.918 49 2 0 6209 6257 428458143 428458191 5.450000e-11 80.5
32 TraesCS1D01G078000 chr6A 79.710 138 25 3 5846 5982 605024473 605024338 5.410000e-16 97.1
33 TraesCS1D01G078000 chr4B 79.433 141 26 3 5504 5642 2908496 2908357 5.410000e-16 97.1
34 TraesCS1D01G078000 chr3B 97.826 46 1 0 6210 6255 462887095 462887140 5.450000e-11 80.5
35 TraesCS1D01G078000 chr7D 95.833 48 1 1 6210 6257 198616710 198616756 7.040000e-10 76.8
36 TraesCS1D01G078000 chr7B 95.745 47 2 0 6211 6257 259714799 259714845 7.040000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G078000 chr1D 59964942 59971493 6551 True 12100.000 12100 100.00000 1 6552 1 chr1D.!!$R2 6551
1 TraesCS1D01G078000 chr1B 95736218 95740628 4410 True 1514.225 4041 92.34500 1994 6541 4 chr1B.!!$R2 4547
2 TraesCS1D01G078000 chr1B 95746409 95748390 1981 True 992.000 1605 89.49750 6 1931 2 chr1B.!!$R3 1925
3 TraesCS1D01G078000 chr1A 58747497 58754289 6792 True 2031.500 3759 90.70525 3 6495 4 chr1A.!!$R2 6492

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
675 737 0.040204 AGAAAACCCCAGCCATCAGG 59.960 55.000 0.00 0.00 38.23 3.86 F
987 1069 0.537653 TCCACCACACAACGTCTTCA 59.462 50.000 0.00 0.00 0.00 3.02 F
2045 2229 0.107459 TGTGTGCTTGTGCCTGTACA 60.107 50.000 0.00 0.00 38.71 2.90 F
2049 2233 0.467804 TGCTTGTGCCTGTACACTCA 59.532 50.000 0.00 0.00 41.30 3.41 F
3255 3512 1.812571 AGCCGATGAATTCAACGCTTT 59.187 42.857 27.07 14.42 40.19 3.51 F
4427 4691 0.035881 ACTAGATGATGCCCCATGCG 59.964 55.000 0.00 0.00 45.60 4.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1943 2127 0.981183 ACCATCCTAACTTGCCGTGA 59.019 50.0 0.00 0.0 0.00 4.35 R
2577 2806 1.145803 GGTCACCGACACAAAGCTAC 58.854 55.0 0.00 0.0 33.68 3.58 R
3767 4024 0.662619 CTTGCACATCAACCACGTGT 59.337 50.0 15.65 0.0 33.13 4.49 R
3877 4136 1.400737 ATCACCTAGTGCCTACGGTC 58.599 55.0 0.00 0.0 32.98 4.79 R
5252 5603 0.037046 CCTGCCCAGCATTCCAAAAC 60.037 55.0 0.00 0.0 38.13 2.43 R
6323 7018 0.037590 ATGTTGTGGCATGGTACGGT 59.962 50.0 0.00 0.0 0.00 4.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 0.833287 AGATGAGGGCAATGCGTAGT 59.167 50.000 0.00 0.00 0.00 2.73
39 40 0.319555 GTAGTGCGTGCTCCTTGTCA 60.320 55.000 0.00 0.00 0.00 3.58
107 108 1.680522 ATGGAGTCGGATTCGCTGCT 61.681 55.000 9.85 0.00 34.26 4.24
108 109 1.035385 TGGAGTCGGATTCGCTGCTA 61.035 55.000 9.85 0.00 34.26 3.49
155 157 1.728701 AGGGTAGAAGAAGGGGAGGAA 59.271 52.381 0.00 0.00 0.00 3.36
215 235 2.242196 AGTGGGATATTTGTGGGGACAG 59.758 50.000 0.00 0.00 44.46 3.51
224 245 4.209620 TGGGGACAGGGGTGGGAA 62.210 66.667 0.00 0.00 35.01 3.97
225 246 2.617215 GGGGACAGGGGTGGGAAT 60.617 66.667 0.00 0.00 0.00 3.01
226 247 1.308392 GGGGACAGGGGTGGGAATA 60.308 63.158 0.00 0.00 0.00 1.75
243 264 2.304221 ATAGTATAGGCCAGCGTGGA 57.696 50.000 5.01 0.00 40.96 4.02
318 366 0.545787 TGGGTACGGGAAGGACATGT 60.546 55.000 0.00 0.00 34.56 3.21
327 375 1.552337 GGAAGGACATGTGAGCTCTGA 59.448 52.381 16.19 1.05 0.00 3.27
417 466 2.019984 GCCATTGTGACTTGGAGATCC 58.980 52.381 8.93 0.00 34.81 3.36
479 529 1.279271 CTGAGGTGGGAATCGAGGTTT 59.721 52.381 0.00 0.00 0.00 3.27
485 535 1.422024 TGGGAATCGAGGTTTGGTTGA 59.578 47.619 0.00 0.00 0.00 3.18
489 539 3.568430 GGAATCGAGGTTTGGTTGAGTTT 59.432 43.478 0.00 0.00 0.00 2.66
501 551 3.500680 TGGTTGAGTTTAAATCACGAGGC 59.499 43.478 0.00 0.00 0.00 4.70
502 552 3.751698 GGTTGAGTTTAAATCACGAGGCT 59.248 43.478 0.00 0.00 0.00 4.58
510 560 8.556213 AGTTTAAATCACGAGGCTTTACATTA 57.444 30.769 0.00 0.00 0.00 1.90
538 588 2.026356 TGGATTGAAATCGAGGGAGCAA 60.026 45.455 0.00 0.00 36.27 3.91
546 596 4.762289 AATCGAGGGAGCAAGTTAATCT 57.238 40.909 0.00 0.00 0.00 2.40
548 598 1.936547 CGAGGGAGCAAGTTAATCTGC 59.063 52.381 4.07 4.07 0.00 4.26
554 604 3.192212 GGAGCAAGTTAATCTGCAAGCTT 59.808 43.478 12.61 0.00 0.00 3.74
571 621 1.068954 GCTTCTTCCGTGGCTTGAAAG 60.069 52.381 0.00 0.00 0.00 2.62
582 633 4.328983 CGTGGCTTGAAAGTCGTAATGTAT 59.671 41.667 0.00 0.00 31.96 2.29
591 642 9.619316 TTGAAAGTCGTAATGTATCATTTTTGG 57.381 29.630 0.37 0.00 0.00 3.28
595 646 8.330466 AGTCGTAATGTATCATTTTTGGTTGA 57.670 30.769 0.37 0.00 0.00 3.18
614 666 2.943690 TGACGAGTGTGCTCTATACCTC 59.056 50.000 0.00 0.00 39.53 3.85
615 667 2.943690 GACGAGTGTGCTCTATACCTCA 59.056 50.000 0.00 0.00 39.53 3.86
617 669 2.946329 CGAGTGTGCTCTATACCTCACT 59.054 50.000 0.00 0.00 39.53 3.41
633 685 3.300388 CTCACTATAAGTCAGGCCAGGA 58.700 50.000 5.01 0.00 0.00 3.86
651 703 1.064537 GGACGGGCCTAATAAAACCCA 60.065 52.381 0.84 0.00 42.97 4.51
664 716 8.692710 CCTAATAAAACCCATAGAAGAAAACCC 58.307 37.037 0.00 0.00 0.00 4.11
665 717 7.490657 AATAAAACCCATAGAAGAAAACCCC 57.509 36.000 0.00 0.00 0.00 4.95
666 718 4.479156 AAACCCATAGAAGAAAACCCCA 57.521 40.909 0.00 0.00 0.00 4.96
675 737 0.040204 AGAAAACCCCAGCCATCAGG 59.960 55.000 0.00 0.00 38.23 3.86
712 774 2.801631 GCCCGGTCCATCAGAGGAG 61.802 68.421 0.00 0.00 38.64 3.69
787 850 4.109675 CCCATCGGACCGGCCTTT 62.110 66.667 15.25 0.00 0.00 3.11
807 872 3.356814 GGCTCAAAACTTAGGCCCA 57.643 52.632 0.00 0.00 37.12 5.36
810 875 1.839424 CTCAAAACTTAGGCCCAGGG 58.161 55.000 0.00 0.00 0.00 4.45
835 900 1.379916 CATGGACAAGACCAGGCCA 59.620 57.895 5.01 0.00 43.49 5.36
844 909 2.930562 ACCAGGCCAGGTCAGGTC 60.931 66.667 15.35 0.00 37.28 3.85
853 918 0.955919 CAGGTCAGGTCGGGCTTTTC 60.956 60.000 0.00 0.00 0.00 2.29
891 957 4.767255 GGGTGTGCTCCGAGCCTG 62.767 72.222 17.81 0.00 41.51 4.85
899 967 3.071206 TCCGAGCCTGCTGTCTCC 61.071 66.667 0.00 0.00 0.00 3.71
911 979 3.745803 GTCTCCCCTCGCGACGTT 61.746 66.667 3.71 0.00 0.00 3.99
987 1069 0.537653 TCCACCACACAACGTCTTCA 59.462 50.000 0.00 0.00 0.00 3.02
1003 1085 4.025563 CGTCTTCACGGTAAACACAAATGA 60.026 41.667 0.00 0.00 42.73 2.57
1171 1253 4.082523 CCGCTTCCTCCTTCGGCA 62.083 66.667 0.00 0.00 35.20 5.69
1331 1430 8.912988 TGAATCCCACATTTTATCCATTAGTTC 58.087 33.333 0.00 0.00 0.00 3.01
1458 1563 3.639099 CTGGGCACACAGTTCAGAT 57.361 52.632 0.00 0.00 33.81 2.90
1489 1594 3.572255 GCTAGGGAAACACCAAACAATGA 59.428 43.478 0.00 0.00 41.20 2.57
1490 1595 4.038642 GCTAGGGAAACACCAAACAATGAA 59.961 41.667 0.00 0.00 41.20 2.57
1496 1601 8.875168 AGGGAAACACCAAACAATGAATAATTA 58.125 29.630 0.00 0.00 41.20 1.40
1584 1709 5.343249 CCCTACACTTAAATCATGCTTTGC 58.657 41.667 4.80 0.00 0.00 3.68
1593 1718 8.910944 ACTTAAATCATGCTTTGCTCTGAATAT 58.089 29.630 4.80 0.00 0.00 1.28
1602 1727 9.956720 ATGCTTTGCTCTGAATATTGTAATAAC 57.043 29.630 0.00 0.00 0.00 1.89
1672 1797 4.790937 TCTATTTGGATGCCAATGCTACA 58.209 39.130 0.00 0.00 43.55 2.74
1719 1902 7.010023 CGACTTACTGAGTGAAAATACTTTGC 58.990 38.462 0.00 0.00 39.19 3.68
1800 1983 9.435802 GGTCTAAATATGTATAGTATTCGCGAG 57.564 37.037 9.59 0.00 0.00 5.03
1823 2006 4.272991 GCATGCTCTCAACATAGGAGAAAG 59.727 45.833 11.37 0.00 40.64 2.62
1910 2093 4.868450 TCCACGTTTGTTCAAAGTACAG 57.132 40.909 0.00 0.00 0.00 2.74
1943 2127 7.207383 TGCATGTTAAGTAGATAATACGTGCT 58.793 34.615 15.53 0.00 44.56 4.40
1959 2143 3.460648 GCTCACGGCAAGTTAGGAT 57.539 52.632 0.00 0.00 41.35 3.24
1963 2147 2.167693 CTCACGGCAAGTTAGGATGGTA 59.832 50.000 0.00 0.00 0.00 3.25
1964 2148 2.167693 TCACGGCAAGTTAGGATGGTAG 59.832 50.000 0.00 0.00 0.00 3.18
2018 2202 0.880278 GTGTCACGTGTGGTCATGCT 60.880 55.000 16.51 0.00 34.22 3.79
2045 2229 0.107459 TGTGTGCTTGTGCCTGTACA 60.107 50.000 0.00 0.00 38.71 2.90
2049 2233 0.467804 TGCTTGTGCCTGTACACTCA 59.532 50.000 0.00 0.00 41.30 3.41
2079 2263 6.323266 TCGTTAGTTTCAATAGTGAGAGAGC 58.677 40.000 0.00 0.00 34.49 4.09
2082 2266 5.899120 AGTTTCAATAGTGAGAGAGCGTA 57.101 39.130 0.00 0.00 34.49 4.42
2130 2321 7.985634 TTTCTTAACAAATCTCAAAGTGTGC 57.014 32.000 0.00 0.00 0.00 4.57
2131 2322 6.691754 TCTTAACAAATCTCAAAGTGTGCA 57.308 33.333 0.00 0.00 0.00 4.57
2192 2411 9.778741 AAATCTCAGAGTGTAGAATTTAACACA 57.221 29.630 20.09 3.54 46.71 3.72
2199 2418 9.185680 AGAGTGTAGAATTTAACACAAACCTTT 57.814 29.630 20.09 4.27 46.71 3.11
2267 2494 6.237313 GTGTCACCCTAACACAACTTATTC 57.763 41.667 1.72 0.00 45.05 1.75
2386 2613 3.173151 TCACCTGCGGGTCATATATCAT 58.827 45.455 16.42 0.00 45.41 2.45
2536 2765 5.122396 GTGTCCGAATTCTCTTTTATGCTGT 59.878 40.000 3.52 0.00 0.00 4.40
2540 2769 6.258727 TCCGAATTCTCTTTTATGCTGTGATC 59.741 38.462 3.52 0.00 0.00 2.92
2547 2776 7.164122 TCTCTTTTATGCTGTGATCAGTTCTT 58.836 34.615 0.00 0.00 43.05 2.52
2560 2789 9.159364 TGTGATCAGTTCTTTTCATCATCTAAG 57.841 33.333 0.00 0.00 0.00 2.18
2577 2806 9.751542 ATCATCTAAGACTTTTACCTATTCACG 57.248 33.333 0.00 0.00 0.00 4.35
2708 2938 8.330466 TCATGGTTCGTTAATTTAGTCACAAT 57.670 30.769 0.00 0.00 0.00 2.71
2776 3009 3.620488 TGGGTCATTGATGTCTTTAGCC 58.380 45.455 0.00 0.00 0.00 3.93
2863 3112 4.981264 TCCTTATGGTTGGCAAACGATGC 61.981 47.826 11.20 9.03 43.67 3.91
2903 3160 5.643379 ATACACAATTGAAACAGCCGAAT 57.357 34.783 13.59 0.00 0.00 3.34
2904 3161 3.900941 ACACAATTGAAACAGCCGAATC 58.099 40.909 13.59 0.00 0.00 2.52
2905 3162 3.317711 ACACAATTGAAACAGCCGAATCA 59.682 39.130 13.59 0.00 0.00 2.57
2906 3163 4.202101 ACACAATTGAAACAGCCGAATCAA 60.202 37.500 13.59 0.00 36.35 2.57
2907 3164 4.148696 CACAATTGAAACAGCCGAATCAAC 59.851 41.667 13.59 0.00 34.88 3.18
2908 3165 4.037923 ACAATTGAAACAGCCGAATCAACT 59.962 37.500 13.59 0.00 34.88 3.16
2909 3166 3.896648 TTGAAACAGCCGAATCAACTC 57.103 42.857 0.00 0.00 0.00 3.01
2910 3167 2.844946 TGAAACAGCCGAATCAACTCA 58.155 42.857 0.00 0.00 0.00 3.41
2911 3168 3.210227 TGAAACAGCCGAATCAACTCAA 58.790 40.909 0.00 0.00 0.00 3.02
2914 3171 2.851195 ACAGCCGAATCAACTCAAACT 58.149 42.857 0.00 0.00 0.00 2.66
2921 3178 5.625311 GCCGAATCAACTCAAACTTTTACAG 59.375 40.000 0.00 0.00 0.00 2.74
2946 3203 4.630894 TCACTCGAACTGCAACATTTTT 57.369 36.364 0.00 0.00 0.00 1.94
2978 3235 6.127479 TGTCTTTACCTGTTTGCAATCAACTT 60.127 34.615 11.19 2.01 30.75 2.66
3009 3266 7.068839 TCCATTCTCCTTGATCTCTTACACTAC 59.931 40.741 0.00 0.00 0.00 2.73
3010 3267 7.147828 CCATTCTCCTTGATCTCTTACACTACA 60.148 40.741 0.00 0.00 0.00 2.74
3035 3292 7.702772 CAGTGCTATAGAGTACGTTTCTGAAAT 59.297 37.037 6.06 0.00 42.66 2.17
3177 3434 8.474025 TGTTTCTTGTCCATGTTCTTTTTATGT 58.526 29.630 0.00 0.00 0.00 2.29
3178 3435 9.313118 GTTTCTTGTCCATGTTCTTTTTATGTT 57.687 29.630 0.00 0.00 0.00 2.71
3248 3505 4.471904 ACTCTTGTAGCCGATGAATTCA 57.528 40.909 11.26 11.26 0.00 2.57
3255 3512 1.812571 AGCCGATGAATTCAACGCTTT 59.187 42.857 27.07 14.42 40.19 3.51
3410 3667 3.241208 CGTTTGTTGTGCTGACGTTTTTC 60.241 43.478 0.00 0.00 0.00 2.29
3560 3817 3.963129 TCCCTTCACATTGTGGTTATCC 58.037 45.455 16.46 0.00 33.87 2.59
3621 3878 3.763097 TTTTGCTTGTGATGCTATCCG 57.237 42.857 0.00 0.00 0.00 4.18
3632 3889 8.757164 TTGTGATGCTATCCGTATATAACTTG 57.243 34.615 0.00 0.00 0.00 3.16
3708 3965 5.774690 TCACATGAAGTTTTAGCTTCCCATT 59.225 36.000 0.00 0.00 42.98 3.16
3744 4001 7.859325 TTTATTCGGGACAAGAGGAAAATAG 57.141 36.000 0.00 0.00 0.00 1.73
3802 4059 3.058224 GTGCAAGTGTTGTAGATTGTCCC 60.058 47.826 0.00 0.00 0.00 4.46
3805 4062 4.083271 GCAAGTGTTGTAGATTGTCCCTTC 60.083 45.833 0.00 0.00 0.00 3.46
3806 4063 5.308825 CAAGTGTTGTAGATTGTCCCTTCT 58.691 41.667 0.00 0.00 0.00 2.85
3813 4070 5.070001 TGTAGATTGTCCCTTCTGTTTTGG 58.930 41.667 0.00 0.00 0.00 3.28
3831 4090 1.896465 TGGTGTGTGACGATGTATGGA 59.104 47.619 0.00 0.00 0.00 3.41
3947 4208 7.437713 AGAATCATGTTAGGATTACACCTCA 57.562 36.000 0.00 0.00 41.00 3.86
3965 4226 8.110860 ACACCTCAAAAATCACGATTCTTATT 57.889 30.769 0.00 0.00 0.00 1.40
4106 4367 5.601583 TCACCTACCGTAGCATTTATTCA 57.398 39.130 0.00 0.00 0.00 2.57
4422 4686 9.113838 CAATTATGTATAACTAGATGATGCCCC 57.886 37.037 0.00 0.00 0.00 5.80
4423 4687 7.806680 TTATGTATAACTAGATGATGCCCCA 57.193 36.000 0.00 0.00 0.00 4.96
4424 4688 6.898171 ATGTATAACTAGATGATGCCCCAT 57.102 37.500 0.00 0.00 0.00 4.00
4425 4689 6.053632 TGTATAACTAGATGATGCCCCATG 57.946 41.667 0.00 0.00 0.00 3.66
4426 4690 2.283145 AACTAGATGATGCCCCATGC 57.717 50.000 0.00 0.00 41.77 4.06
4427 4691 0.035881 ACTAGATGATGCCCCATGCG 59.964 55.000 0.00 0.00 45.60 4.73
4428 4692 0.322648 CTAGATGATGCCCCATGCGA 59.677 55.000 0.00 0.00 45.60 5.10
4435 4699 4.211502 GCCCCATGCGATTGGTGC 62.212 66.667 3.72 0.19 32.95 5.01
4436 4700 3.530260 CCCCATGCGATTGGTGCC 61.530 66.667 3.72 0.00 34.77 5.01
4444 4708 2.188829 CGATTGGTGCCGGCATGAT 61.189 57.895 35.23 25.26 0.00 2.45
4482 4746 6.932960 TCTGTATGAACAATCTAGCATCATGG 59.067 38.462 0.00 0.00 34.49 3.66
4491 4755 7.568349 ACAATCTAGCATCATGGTTAAGAGAA 58.432 34.615 0.00 0.00 0.00 2.87
4500 4764 8.715998 GCATCATGGTTAAGAGAACATATAGTG 58.284 37.037 0.00 0.00 0.00 2.74
4502 4766 7.791029 TCATGGTTAAGAGAACATATAGTGCA 58.209 34.615 0.00 0.00 0.00 4.57
4552 4816 5.527511 TTGTTTCTGCAACACAAACAATG 57.472 34.783 16.06 0.00 45.54 2.82
4553 4817 4.564041 TGTTTCTGCAACACAAACAATGT 58.436 34.783 9.36 0.00 40.71 2.71
4595 4860 0.316204 AATTGCTTGTCCTGCAGCAC 59.684 50.000 8.66 3.89 41.71 4.40
4596 4861 1.530013 ATTGCTTGTCCTGCAGCACC 61.530 55.000 8.66 0.00 41.71 5.01
4613 4878 1.968017 CCATGGCTTGTGACTGCGT 60.968 57.895 0.00 0.00 0.00 5.24
4620 4885 2.412847 GGCTTGTGACTGCGTGATTAAC 60.413 50.000 0.00 0.00 0.00 2.01
4630 4895 4.631813 ACTGCGTGATTAACCTGATTCTTC 59.368 41.667 0.00 0.00 0.00 2.87
4632 4897 3.001330 GCGTGATTAACCTGATTCTTCGG 59.999 47.826 0.00 0.00 0.00 4.30
4857 5207 9.245962 CTTTATAACCAGGTATAGAGTTTCACG 57.754 37.037 0.00 0.00 0.00 4.35
4871 5221 7.531280 AGAGTTTCACGTCAAGATGATATTG 57.469 36.000 0.00 0.00 0.00 1.90
4882 5232 8.274248 CGTCAAGATGATATTGATCAACTTCAG 58.726 37.037 20.59 11.48 46.61 3.02
4885 5235 6.598503 AGATGATATTGATCAACTTCAGCCA 58.401 36.000 23.61 11.90 45.23 4.75
4888 5238 6.124340 TGATATTGATCAACTTCAGCCATGT 58.876 36.000 11.07 0.00 39.20 3.21
4893 5243 1.872952 TCAACTTCAGCCATGTCAACG 59.127 47.619 0.00 0.00 0.00 4.10
4894 5244 1.069022 CAACTTCAGCCATGTCAACGG 60.069 52.381 0.00 0.00 0.00 4.44
4907 5257 2.111043 AACGGCAGTGTGACCCTG 59.889 61.111 0.00 0.00 0.00 4.45
4913 5263 2.850439 CAGTGTGACCCTGCATCTG 58.150 57.895 0.00 0.00 0.00 2.90
4940 5290 6.127479 TGCACATGGACTTCTTTTAGTTGTTT 60.127 34.615 0.00 0.00 0.00 2.83
4941 5291 6.417930 GCACATGGACTTCTTTTAGTTGTTTC 59.582 38.462 0.00 0.00 0.00 2.78
4942 5292 7.479980 CACATGGACTTCTTTTAGTTGTTTCA 58.520 34.615 0.00 0.00 0.00 2.69
4944 5294 8.527810 ACATGGACTTCTTTTAGTTGTTTCAAA 58.472 29.630 0.00 0.00 0.00 2.69
4945 5295 9.533253 CATGGACTTCTTTTAGTTGTTTCAAAT 57.467 29.630 0.00 0.00 0.00 2.32
4969 5319 6.246420 ACAGAAATAAAGCATGATATCGCC 57.754 37.500 0.00 0.00 0.00 5.54
4995 5345 7.966753 CAGATATGCATTATACTTGTGCCATTC 59.033 37.037 3.54 0.00 38.06 2.67
5008 5358 6.094603 ACTTGTGCCATTCTGATGATAGTTTC 59.905 38.462 0.00 0.00 35.16 2.78
5252 5603 6.327154 TGGTGTACTCTTGTCACATAATACG 58.673 40.000 0.00 0.00 34.27 3.06
5266 5617 5.743398 CACATAATACGTTTTGGAATGCTGG 59.257 40.000 0.00 0.00 0.00 4.85
5307 5658 1.688197 ACAAACTGGAATTGGCACAGG 59.312 47.619 7.62 0.00 42.39 4.00
5489 5845 7.606456 CCTACTAGCTTTGTTGTGGATAAAAGA 59.394 37.037 0.00 0.00 32.53 2.52
5577 5934 3.577919 GGATAAGGTCCTCTCTGCCTAA 58.422 50.000 0.00 0.00 44.16 2.69
5582 5939 0.325765 GTCCTCTCTGCCTAACCCCT 60.326 60.000 0.00 0.00 0.00 4.79
5587 5944 1.615424 TCTGCCTAACCCCTGTCCC 60.615 63.158 0.00 0.00 0.00 4.46
5643 6000 2.337246 TGTGTCTTCGGCGGATCGA 61.337 57.895 7.21 0.00 37.38 3.59
5671 6028 4.610605 TTCAGTCGGTATTGGTCTTTGA 57.389 40.909 0.00 0.00 0.00 2.69
5701 6068 2.156891 CGTTGATCCAATGTTCGTTCGT 59.843 45.455 0.00 0.00 0.00 3.85
5709 6076 3.678072 CCAATGTTCGTTCGTGTGTCTAT 59.322 43.478 0.00 0.00 0.00 1.98
5711 6078 5.346551 CCAATGTTCGTTCGTGTGTCTATAA 59.653 40.000 0.00 0.00 0.00 0.98
5715 6082 5.400188 TGTTCGTTCGTGTGTCTATAAGTTG 59.600 40.000 0.00 0.00 0.00 3.16
5716 6083 5.112220 TCGTTCGTGTGTCTATAAGTTGT 57.888 39.130 0.00 0.00 0.00 3.32
5761 6130 3.646611 TCGTCGATGGTTGTTGTTCTA 57.353 42.857 4.48 0.00 0.00 2.10
5764 6133 3.364023 CGTCGATGGTTGTTGTTCTAGTC 59.636 47.826 0.00 0.00 0.00 2.59
5799 6168 3.341823 GGGTCTTAGCATAGCATGATGG 58.658 50.000 0.00 0.00 0.00 3.51
5826 6195 9.590451 CTTCCCGACTATATTTAGTACAACAAA 57.410 33.333 0.00 0.00 38.81 2.83
5844 6213 0.467804 AATTTTGCTTGGCCCGTTGT 59.532 45.000 0.00 0.00 0.00 3.32
5859 6228 0.625849 GTTGTGGGAGGGGTGATGAT 59.374 55.000 0.00 0.00 0.00 2.45
5860 6229 0.625316 TTGTGGGAGGGGTGATGATG 59.375 55.000 0.00 0.00 0.00 3.07
5964 6333 5.376854 AGTGTTCTTTGTATTGCCATGAC 57.623 39.130 0.00 0.00 0.00 3.06
5966 6335 5.301551 AGTGTTCTTTGTATTGCCATGACAA 59.698 36.000 0.00 0.00 0.00 3.18
5978 6347 5.456548 TGCCATGACAAATAATGCATAGG 57.543 39.130 0.00 0.00 0.00 2.57
5982 6351 6.294899 GCCATGACAAATAATGCATAGGTCAT 60.295 38.462 18.18 18.18 39.38 3.06
5983 6352 7.663827 CCATGACAAATAATGCATAGGTCATT 58.336 34.615 19.96 6.69 37.95 2.57
6029 6405 0.321475 AGCCAGTCTTCTTGCAGCTC 60.321 55.000 0.00 0.00 35.19 4.09
6030 6406 1.633852 GCCAGTCTTCTTGCAGCTCG 61.634 60.000 0.00 0.00 33.31 5.03
6031 6407 1.018226 CCAGTCTTCTTGCAGCTCGG 61.018 60.000 0.00 0.00 0.00 4.63
6032 6408 1.375268 AGTCTTCTTGCAGCTCGGC 60.375 57.895 0.00 0.00 0.00 5.54
6033 6409 2.046892 TCTTCTTGCAGCTCGGCC 60.047 61.111 0.00 0.00 0.00 6.13
6075 6451 7.215719 ACTATTAAAAGACCAACCTCTTTGC 57.784 36.000 0.00 0.00 39.18 3.68
6126 6502 1.291033 TCCCAGCTAGTCCTATGTGGT 59.709 52.381 0.00 0.00 37.07 4.16
6148 6524 4.757149 GTGCCTACCTAGCAAATATCAAGG 59.243 45.833 0.00 0.00 43.02 3.61
6149 6525 4.412199 TGCCTACCTAGCAAATATCAAGGT 59.588 41.667 0.00 0.00 43.00 3.50
6175 6870 1.421646 CAAGTGAACCCCAAGGAGAGT 59.578 52.381 0.00 0.00 36.73 3.24
6181 6876 2.266055 CCCAAGGAGAGTCGCCAC 59.734 66.667 15.88 0.00 0.00 5.01
6194 6889 4.459089 GCCACCTGGGTCGCTCTC 62.459 72.222 0.00 0.00 39.65 3.20
6195 6890 2.997315 CCACCTGGGTCGCTCTCA 60.997 66.667 0.00 0.00 0.00 3.27
6196 6891 2.262915 CACCTGGGTCGCTCTCAC 59.737 66.667 0.00 0.00 0.00 3.51
6197 6892 3.374402 ACCTGGGTCGCTCTCACG 61.374 66.667 0.00 0.00 0.00 4.35
6198 6893 4.135153 CCTGGGTCGCTCTCACGG 62.135 72.222 0.00 0.00 0.00 4.94
6199 6894 4.803426 CTGGGTCGCTCTCACGGC 62.803 72.222 0.00 0.00 36.80 5.68
6201 6896 4.070552 GGGTCGCTCTCACGGCTT 62.071 66.667 0.00 0.00 37.90 4.35
6202 6897 2.507324 GGTCGCTCTCACGGCTTC 60.507 66.667 0.00 0.00 37.90 3.86
6203 6898 2.569134 GTCGCTCTCACGGCTTCT 59.431 61.111 0.00 0.00 34.09 2.85
6204 6899 1.080434 GTCGCTCTCACGGCTTCTT 60.080 57.895 0.00 0.00 34.09 2.52
6205 6900 1.073768 GTCGCTCTCACGGCTTCTTC 61.074 60.000 0.00 0.00 34.09 2.87
6206 6901 1.214062 CGCTCTCACGGCTTCTTCT 59.786 57.895 0.00 0.00 0.00 2.85
6207 6902 0.389166 CGCTCTCACGGCTTCTTCTT 60.389 55.000 0.00 0.00 0.00 2.52
6208 6903 1.802069 GCTCTCACGGCTTCTTCTTT 58.198 50.000 0.00 0.00 0.00 2.52
6209 6904 2.147150 GCTCTCACGGCTTCTTCTTTT 58.853 47.619 0.00 0.00 0.00 2.27
6210 6905 2.550180 GCTCTCACGGCTTCTTCTTTTT 59.450 45.455 0.00 0.00 0.00 1.94
6238 6933 7.562454 TTTTGATCGGGTAAACATAGATTCC 57.438 36.000 0.00 0.00 0.00 3.01
6239 6934 5.880164 TGATCGGGTAAACATAGATTCCA 57.120 39.130 0.00 0.00 0.00 3.53
6240 6935 6.433847 TGATCGGGTAAACATAGATTCCAT 57.566 37.500 0.00 0.00 0.00 3.41
6241 6936 6.837312 TGATCGGGTAAACATAGATTCCATT 58.163 36.000 0.00 0.00 0.00 3.16
6242 6937 7.969004 TGATCGGGTAAACATAGATTCCATTA 58.031 34.615 0.00 0.00 0.00 1.90
6243 6938 8.433599 TGATCGGGTAAACATAGATTCCATTAA 58.566 33.333 0.00 0.00 0.00 1.40
6244 6939 8.617290 ATCGGGTAAACATAGATTCCATTAAC 57.383 34.615 0.00 0.00 0.00 2.01
6245 6940 6.993902 TCGGGTAAACATAGATTCCATTAACC 59.006 38.462 0.00 0.00 0.00 2.85
6246 6941 6.768861 CGGGTAAACATAGATTCCATTAACCA 59.231 38.462 0.00 0.00 31.12 3.67
6247 6942 7.255001 CGGGTAAACATAGATTCCATTAACCAC 60.255 40.741 0.00 0.00 31.12 4.16
6248 6943 7.013942 GGGTAAACATAGATTCCATTAACCACC 59.986 40.741 0.00 0.00 31.82 4.61
6249 6944 7.778382 GGTAAACATAGATTCCATTAACCACCT 59.222 37.037 0.00 0.00 0.00 4.00
6250 6945 9.841295 GTAAACATAGATTCCATTAACCACCTA 57.159 33.333 0.00 0.00 0.00 3.08
6251 6946 8.980481 AAACATAGATTCCATTAACCACCTAG 57.020 34.615 0.00 0.00 0.00 3.02
6252 6947 6.534634 ACATAGATTCCATTAACCACCTAGC 58.465 40.000 0.00 0.00 0.00 3.42
6253 6948 6.101150 ACATAGATTCCATTAACCACCTAGCA 59.899 38.462 0.00 0.00 0.00 3.49
6254 6949 4.781934 AGATTCCATTAACCACCTAGCAC 58.218 43.478 0.00 0.00 0.00 4.40
6255 6950 4.227300 AGATTCCATTAACCACCTAGCACA 59.773 41.667 0.00 0.00 0.00 4.57
6256 6951 4.374689 TTCCATTAACCACCTAGCACAA 57.625 40.909 0.00 0.00 0.00 3.33
6257 6952 3.950397 TCCATTAACCACCTAGCACAAG 58.050 45.455 0.00 0.00 0.00 3.16
6258 6953 3.329520 TCCATTAACCACCTAGCACAAGT 59.670 43.478 0.00 0.00 0.00 3.16
6259 6954 4.079253 CCATTAACCACCTAGCACAAGTT 58.921 43.478 0.00 0.00 0.00 2.66
6260 6955 4.522789 CCATTAACCACCTAGCACAAGTTT 59.477 41.667 0.00 0.00 0.00 2.66
6261 6956 5.708230 CCATTAACCACCTAGCACAAGTTTA 59.292 40.000 0.00 0.00 0.00 2.01
6262 6957 6.377146 CCATTAACCACCTAGCACAAGTTTAT 59.623 38.462 0.00 0.00 0.00 1.40
6263 6958 7.415206 CCATTAACCACCTAGCACAAGTTTATC 60.415 40.741 0.00 0.00 0.00 1.75
6264 6959 4.634012 ACCACCTAGCACAAGTTTATCA 57.366 40.909 0.00 0.00 0.00 2.15
6265 6960 4.980573 ACCACCTAGCACAAGTTTATCAA 58.019 39.130 0.00 0.00 0.00 2.57
6266 6961 5.381757 ACCACCTAGCACAAGTTTATCAAA 58.618 37.500 0.00 0.00 0.00 2.69
6267 6962 5.830991 ACCACCTAGCACAAGTTTATCAAAA 59.169 36.000 0.00 0.00 0.00 2.44
6268 6963 6.322712 ACCACCTAGCACAAGTTTATCAAAAA 59.677 34.615 0.00 0.00 0.00 1.94
6289 6984 5.447624 AAAAACCACCTAGCACAACATAC 57.552 39.130 0.00 0.00 0.00 2.39
6290 6985 4.367039 AAACCACCTAGCACAACATACT 57.633 40.909 0.00 0.00 0.00 2.12
6291 6986 4.367039 AACCACCTAGCACAACATACTT 57.633 40.909 0.00 0.00 0.00 2.24
6292 6987 3.939066 ACCACCTAGCACAACATACTTC 58.061 45.455 0.00 0.00 0.00 3.01
6293 6988 3.270877 CCACCTAGCACAACATACTTCC 58.729 50.000 0.00 0.00 0.00 3.46
6294 6989 3.055094 CCACCTAGCACAACATACTTCCT 60.055 47.826 0.00 0.00 0.00 3.36
6295 6990 3.935203 CACCTAGCACAACATACTTCCTG 59.065 47.826 0.00 0.00 0.00 3.86
6296 6991 3.055094 ACCTAGCACAACATACTTCCTGG 60.055 47.826 0.00 0.00 0.00 4.45
6297 6992 3.055094 CCTAGCACAACATACTTCCTGGT 60.055 47.826 0.00 0.00 0.00 4.00
6298 6993 3.508845 AGCACAACATACTTCCTGGTT 57.491 42.857 0.00 0.00 0.00 3.67
6299 6994 4.634012 AGCACAACATACTTCCTGGTTA 57.366 40.909 0.00 0.00 0.00 2.85
6300 6995 4.324267 AGCACAACATACTTCCTGGTTAC 58.676 43.478 0.00 0.00 0.00 2.50
6301 6996 4.069304 GCACAACATACTTCCTGGTTACA 58.931 43.478 0.00 0.00 0.00 2.41
6302 6997 4.700213 GCACAACATACTTCCTGGTTACAT 59.300 41.667 0.00 0.00 0.00 2.29
6303 6998 5.163754 GCACAACATACTTCCTGGTTACATC 60.164 44.000 0.00 0.00 0.00 3.06
6304 6999 5.937540 CACAACATACTTCCTGGTTACATCA 59.062 40.000 0.00 0.00 0.00 3.07
6305 7000 6.092670 CACAACATACTTCCTGGTTACATCAG 59.907 42.308 0.00 0.00 0.00 2.90
6306 7001 6.013725 ACAACATACTTCCTGGTTACATCAGA 60.014 38.462 0.00 0.00 34.36 3.27
6307 7002 6.227298 ACATACTTCCTGGTTACATCAGAG 57.773 41.667 0.00 0.00 34.36 3.35
6308 7003 5.958380 ACATACTTCCTGGTTACATCAGAGA 59.042 40.000 0.00 0.00 34.36 3.10
6309 7004 6.613271 ACATACTTCCTGGTTACATCAGAGAT 59.387 38.462 0.00 0.00 34.36 2.75
6310 7005 7.126421 ACATACTTCCTGGTTACATCAGAGATT 59.874 37.037 0.00 0.00 34.36 2.40
6311 7006 8.642432 CATACTTCCTGGTTACATCAGAGATTA 58.358 37.037 0.00 0.00 34.36 1.75
6312 7007 6.879400 ACTTCCTGGTTACATCAGAGATTAC 58.121 40.000 0.00 0.00 34.36 1.89
6313 7008 6.440647 ACTTCCTGGTTACATCAGAGATTACA 59.559 38.462 0.00 0.00 34.36 2.41
6314 7009 6.867519 TCCTGGTTACATCAGAGATTACAA 57.132 37.500 0.00 0.00 34.36 2.41
6315 7010 7.252612 TCCTGGTTACATCAGAGATTACAAA 57.747 36.000 0.00 0.00 34.36 2.83
6316 7011 7.331026 TCCTGGTTACATCAGAGATTACAAAG 58.669 38.462 0.00 0.00 34.36 2.77
6317 7012 7.038302 TCCTGGTTACATCAGAGATTACAAAGT 60.038 37.037 0.00 0.00 34.36 2.66
6318 7013 7.278868 CCTGGTTACATCAGAGATTACAAAGTC 59.721 40.741 0.00 0.00 34.36 3.01
6319 7014 7.907389 TGGTTACATCAGAGATTACAAAGTCT 58.093 34.615 0.00 0.00 0.00 3.24
6320 7015 9.031537 TGGTTACATCAGAGATTACAAAGTCTA 57.968 33.333 0.00 0.00 0.00 2.59
6321 7016 9.522804 GGTTACATCAGAGATTACAAAGTCTAG 57.477 37.037 0.00 0.00 0.00 2.43
6325 7020 8.254508 ACATCAGAGATTACAAAGTCTAGAACC 58.745 37.037 0.00 0.00 0.00 3.62
6326 7021 6.853720 TCAGAGATTACAAAGTCTAGAACCG 58.146 40.000 0.00 0.00 0.00 4.44
6327 7022 6.433404 TCAGAGATTACAAAGTCTAGAACCGT 59.567 38.462 0.00 0.00 0.00 4.83
6328 7023 7.609146 TCAGAGATTACAAAGTCTAGAACCGTA 59.391 37.037 0.00 0.00 0.00 4.02
6329 7024 7.697291 CAGAGATTACAAAGTCTAGAACCGTAC 59.303 40.741 0.00 0.00 0.00 3.67
6330 7025 6.861144 AGATTACAAAGTCTAGAACCGTACC 58.139 40.000 0.00 0.00 0.00 3.34
6331 7026 6.435277 AGATTACAAAGTCTAGAACCGTACCA 59.565 38.462 0.00 0.00 0.00 3.25
6332 7027 6.594788 TTACAAAGTCTAGAACCGTACCAT 57.405 37.500 0.00 0.00 0.00 3.55
6333 7028 4.817517 ACAAAGTCTAGAACCGTACCATG 58.182 43.478 0.00 0.00 0.00 3.66
6334 7029 3.521947 AAGTCTAGAACCGTACCATGC 57.478 47.619 0.00 0.00 0.00 4.06
6335 7030 1.755380 AGTCTAGAACCGTACCATGCC 59.245 52.381 0.00 0.00 0.00 4.40
6336 7031 1.479323 GTCTAGAACCGTACCATGCCA 59.521 52.381 0.00 0.00 0.00 4.92
6337 7032 1.479323 TCTAGAACCGTACCATGCCAC 59.521 52.381 0.00 0.00 0.00 5.01
6338 7033 1.206132 CTAGAACCGTACCATGCCACA 59.794 52.381 0.00 0.00 0.00 4.17
6339 7034 0.398696 AGAACCGTACCATGCCACAA 59.601 50.000 0.00 0.00 0.00 3.33
6340 7035 0.519961 GAACCGTACCATGCCACAAC 59.480 55.000 0.00 0.00 0.00 3.32
6341 7036 0.179015 AACCGTACCATGCCACAACA 60.179 50.000 0.00 0.00 0.00 3.33
6342 7037 0.037590 ACCGTACCATGCCACAACAT 59.962 50.000 0.00 0.00 0.00 2.71
6343 7038 1.279558 ACCGTACCATGCCACAACATA 59.720 47.619 0.00 0.00 0.00 2.29
6344 7039 2.092646 ACCGTACCATGCCACAACATAT 60.093 45.455 0.00 0.00 0.00 1.78
6345 7040 2.290367 CCGTACCATGCCACAACATATG 59.710 50.000 0.00 0.00 0.00 1.78
6346 7041 3.202097 CGTACCATGCCACAACATATGA 58.798 45.455 10.38 0.00 0.00 2.15
6347 7042 3.248363 CGTACCATGCCACAACATATGAG 59.752 47.826 10.38 4.05 0.00 2.90
6348 7043 2.026641 ACCATGCCACAACATATGAGC 58.973 47.619 10.38 4.79 34.04 4.26
6349 7044 2.025898 CCATGCCACAACATATGAGCA 58.974 47.619 10.38 10.15 42.81 4.26
6350 7045 2.034179 CCATGCCACAACATATGAGCAG 59.966 50.000 10.38 0.00 42.24 4.24
6351 7046 2.785540 TGCCACAACATATGAGCAGA 57.214 45.000 10.38 0.00 37.08 4.26
6352 7047 3.070476 TGCCACAACATATGAGCAGAA 57.930 42.857 10.38 0.00 37.08 3.02
6353 7048 3.011818 TGCCACAACATATGAGCAGAAG 58.988 45.455 10.38 0.00 37.08 2.85
6354 7049 2.357009 GCCACAACATATGAGCAGAAGG 59.643 50.000 10.38 3.18 33.76 3.46
6355 7050 3.614092 CCACAACATATGAGCAGAAGGT 58.386 45.455 10.38 0.00 0.00 3.50
6356 7051 4.012374 CCACAACATATGAGCAGAAGGTT 58.988 43.478 10.38 0.00 0.00 3.50
6357 7052 4.095483 CCACAACATATGAGCAGAAGGTTC 59.905 45.833 10.38 0.00 0.00 3.62
6358 7053 4.095483 CACAACATATGAGCAGAAGGTTCC 59.905 45.833 10.38 0.00 0.00 3.62
6359 7054 4.263462 ACAACATATGAGCAGAAGGTTCCA 60.263 41.667 10.38 0.00 0.00 3.53
6360 7055 4.785346 ACATATGAGCAGAAGGTTCCAT 57.215 40.909 10.38 0.00 0.00 3.41
6361 7056 5.894298 ACATATGAGCAGAAGGTTCCATA 57.106 39.130 10.38 0.00 0.00 2.74
6362 7057 5.862845 ACATATGAGCAGAAGGTTCCATAG 58.137 41.667 10.38 0.00 0.00 2.23
6363 7058 2.698855 TGAGCAGAAGGTTCCATAGC 57.301 50.000 0.00 0.00 0.00 2.97
6364 7059 1.210478 TGAGCAGAAGGTTCCATAGCC 59.790 52.381 0.00 0.00 0.00 3.93
6365 7060 0.179000 AGCAGAAGGTTCCATAGCCG 59.821 55.000 0.00 0.00 0.00 5.52
6366 7061 1.440145 GCAGAAGGTTCCATAGCCGC 61.440 60.000 0.00 0.00 0.00 6.53
6367 7062 0.107703 CAGAAGGTTCCATAGCCGCA 60.108 55.000 0.00 0.00 0.00 5.69
6368 7063 0.107654 AGAAGGTTCCATAGCCGCAC 60.108 55.000 0.00 0.00 0.00 5.34
6369 7064 1.077716 AAGGTTCCATAGCCGCACC 60.078 57.895 0.00 0.00 0.00 5.01
6370 7065 1.562672 AAGGTTCCATAGCCGCACCT 61.563 55.000 0.00 0.00 39.69 4.00
6371 7066 1.077716 GGTTCCATAGCCGCACCTT 60.078 57.895 0.00 0.00 0.00 3.50
6372 7067 1.376609 GGTTCCATAGCCGCACCTTG 61.377 60.000 0.00 0.00 0.00 3.61
6373 7068 0.392461 GTTCCATAGCCGCACCTTGA 60.392 55.000 0.00 0.00 0.00 3.02
6374 7069 0.392461 TTCCATAGCCGCACCTTGAC 60.392 55.000 0.00 0.00 0.00 3.18
6375 7070 1.819632 CCATAGCCGCACCTTGACC 60.820 63.158 0.00 0.00 0.00 4.02
6376 7071 1.819632 CATAGCCGCACCTTGACCC 60.820 63.158 0.00 0.00 0.00 4.46
6377 7072 3.385749 ATAGCCGCACCTTGACCCG 62.386 63.158 0.00 0.00 0.00 5.28
6380 7075 4.077184 CCGCACCTTGACCCGCTA 62.077 66.667 0.00 0.00 0.00 4.26
6381 7076 2.047655 CGCACCTTGACCCGCTAA 60.048 61.111 0.00 0.00 0.00 3.09
6382 7077 1.449601 CGCACCTTGACCCGCTAAT 60.450 57.895 0.00 0.00 0.00 1.73
6383 7078 1.024579 CGCACCTTGACCCGCTAATT 61.025 55.000 0.00 0.00 0.00 1.40
6384 7079 1.173913 GCACCTTGACCCGCTAATTT 58.826 50.000 0.00 0.00 0.00 1.82
6385 7080 2.361789 GCACCTTGACCCGCTAATTTA 58.638 47.619 0.00 0.00 0.00 1.40
6386 7081 2.949644 GCACCTTGACCCGCTAATTTAT 59.050 45.455 0.00 0.00 0.00 1.40
6387 7082 3.243068 GCACCTTGACCCGCTAATTTATG 60.243 47.826 0.00 0.00 0.00 1.90
6388 7083 4.196193 CACCTTGACCCGCTAATTTATGA 58.804 43.478 0.00 0.00 0.00 2.15
6389 7084 4.273480 CACCTTGACCCGCTAATTTATGAG 59.727 45.833 0.00 0.00 0.00 2.90
6390 7085 3.251004 CCTTGACCCGCTAATTTATGAGC 59.749 47.826 0.00 0.00 35.24 4.26
6391 7086 3.552132 TGACCCGCTAATTTATGAGCA 57.448 42.857 0.25 0.00 38.69 4.26
6392 7087 3.879998 TGACCCGCTAATTTATGAGCAA 58.120 40.909 0.25 0.00 38.69 3.91
6393 7088 3.625764 TGACCCGCTAATTTATGAGCAAC 59.374 43.478 0.25 0.00 38.69 4.17
6394 7089 3.616219 ACCCGCTAATTTATGAGCAACA 58.384 40.909 0.25 0.00 38.69 3.33
6395 7090 3.377172 ACCCGCTAATTTATGAGCAACAC 59.623 43.478 0.25 0.00 38.69 3.32
6396 7091 3.546020 CCCGCTAATTTATGAGCAACACG 60.546 47.826 0.25 0.00 38.69 4.49
6397 7092 3.308595 CCGCTAATTTATGAGCAACACGA 59.691 43.478 0.00 0.00 38.69 4.35
6398 7093 4.024893 CCGCTAATTTATGAGCAACACGAT 60.025 41.667 0.00 0.00 38.69 3.73
6399 7094 5.501715 CGCTAATTTATGAGCAACACGATT 58.498 37.500 0.00 0.00 38.69 3.34
6400 7095 6.292649 CCGCTAATTTATGAGCAACACGATTA 60.293 38.462 0.00 0.00 38.69 1.75
6401 7096 6.570058 CGCTAATTTATGAGCAACACGATTAC 59.430 38.462 0.00 0.00 38.69 1.89
6402 7097 7.406553 GCTAATTTATGAGCAACACGATTACA 58.593 34.615 0.00 0.00 38.62 2.41
6403 7098 8.070171 GCTAATTTATGAGCAACACGATTACAT 58.930 33.333 0.00 0.00 38.62 2.29
6404 7099 9.935682 CTAATTTATGAGCAACACGATTACATT 57.064 29.630 0.00 0.00 0.00 2.71
6405 7100 8.841444 AATTTATGAGCAACACGATTACATTC 57.159 30.769 0.00 0.00 0.00 2.67
6406 7101 3.989705 TGAGCAACACGATTACATTCG 57.010 42.857 0.00 0.00 44.56 3.34
6407 7102 2.093625 TGAGCAACACGATTACATTCGC 59.906 45.455 0.00 0.00 42.82 4.70
6408 7103 1.060553 AGCAACACGATTACATTCGCG 59.939 47.619 0.00 0.00 42.82 5.87
6409 7104 1.850515 GCAACACGATTACATTCGCGG 60.851 52.381 6.13 0.00 42.82 6.46
6410 7105 1.656594 CAACACGATTACATTCGCGGA 59.343 47.619 6.13 0.00 42.82 5.54
6411 7106 1.274596 ACACGATTACATTCGCGGAC 58.725 50.000 6.13 0.00 42.82 4.79
6412 7107 1.273688 CACGATTACATTCGCGGACA 58.726 50.000 6.13 0.00 42.82 4.02
6413 7108 1.006391 CACGATTACATTCGCGGACAC 60.006 52.381 6.13 0.00 42.82 3.67
6414 7109 1.273688 CGATTACATTCGCGGACACA 58.726 50.000 6.13 0.00 31.60 3.72
6415 7110 1.255342 CGATTACATTCGCGGACACAG 59.745 52.381 6.13 0.00 31.60 3.66
6416 7111 1.004927 GATTACATTCGCGGACACAGC 60.005 52.381 6.13 0.00 0.00 4.40
6426 7121 2.807045 GACACAGCGCTCTCACGG 60.807 66.667 7.13 0.00 0.00 4.94
6430 7125 2.740055 CAGCGCTCTCACGGCTTT 60.740 61.111 7.13 0.00 34.13 3.51
6541 7279 3.117552 TCTTCCCTAACCCTTCTCCTC 57.882 52.381 0.00 0.00 0.00 3.71
6542 7280 2.120312 CTTCCCTAACCCTTCTCCTCC 58.880 57.143 0.00 0.00 0.00 4.30
6543 7281 1.405243 TCCCTAACCCTTCTCCTCCT 58.595 55.000 0.00 0.00 0.00 3.69
6544 7282 1.008449 TCCCTAACCCTTCTCCTCCTG 59.992 57.143 0.00 0.00 0.00 3.86
6545 7283 1.008449 CCCTAACCCTTCTCCTCCTGA 59.992 57.143 0.00 0.00 0.00 3.86
6546 7284 2.360854 CCCTAACCCTTCTCCTCCTGAT 60.361 54.545 0.00 0.00 0.00 2.90
6547 7285 2.969262 CCTAACCCTTCTCCTCCTGATC 59.031 54.545 0.00 0.00 0.00 2.92
6548 7286 2.959421 AACCCTTCTCCTCCTGATCT 57.041 50.000 0.00 0.00 0.00 2.75
6549 7287 2.173126 ACCCTTCTCCTCCTGATCTG 57.827 55.000 0.00 0.00 0.00 2.90
6550 7288 1.343884 ACCCTTCTCCTCCTGATCTGG 60.344 57.143 12.30 12.30 0.00 3.86
6551 7289 0.758123 CCTTCTCCTCCTGATCTGGC 59.242 60.000 13.60 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.109799 ATTGCCCTCATCTCGCCG 59.890 61.111 0.00 0.00 0.00 6.46
1 2 2.550101 GCATTGCCCTCATCTCGCC 61.550 63.158 0.00 0.00 0.00 5.54
24 25 1.375908 GGATGACAAGGAGCACGCA 60.376 57.895 0.00 0.00 0.00 5.24
107 108 2.951457 TCATGGTCGCAACGAATCTA 57.049 45.000 0.00 0.00 37.72 1.98
108 109 1.935873 CATCATGGTCGCAACGAATCT 59.064 47.619 0.00 0.00 37.72 2.40
155 157 1.339097 ACCTTACTCCACTGCTCGTT 58.661 50.000 0.00 0.00 0.00 3.85
206 226 4.995058 TCCCACCCCTGTCCCCAC 62.995 72.222 0.00 0.00 0.00 4.61
215 235 1.914108 GGCCTATACTATTCCCACCCC 59.086 57.143 0.00 0.00 0.00 4.95
224 245 1.893801 GTCCACGCTGGCCTATACTAT 59.106 52.381 3.32 0.00 37.47 2.12
225 246 1.325355 GTCCACGCTGGCCTATACTA 58.675 55.000 3.32 0.00 37.47 1.82
226 247 1.400530 GGTCCACGCTGGCCTATACT 61.401 60.000 3.32 0.00 37.47 2.12
318 366 3.268330 GAGCATTCACAATCAGAGCTCA 58.732 45.455 17.77 0.00 44.60 4.26
327 375 3.136763 CTCCGCTATGAGCATTCACAAT 58.863 45.455 0.00 0.00 42.58 2.71
479 529 3.500680 GCCTCGTGATTTAAACTCAACCA 59.499 43.478 0.00 0.00 0.00 3.67
485 535 7.448748 AATGTAAAGCCTCGTGATTTAAACT 57.551 32.000 0.00 0.00 0.00 2.66
489 539 7.820386 TCTGTTAATGTAAAGCCTCGTGATTTA 59.180 33.333 0.00 0.00 0.00 1.40
510 560 4.256920 CCTCGATTTCAATCCAGTCTGTT 58.743 43.478 0.00 0.00 31.68 3.16
538 588 3.686726 CGGAAGAAGCTTGCAGATTAACT 59.313 43.478 2.10 0.00 0.00 2.24
546 596 2.260869 GCCACGGAAGAAGCTTGCA 61.261 57.895 2.10 0.00 0.00 4.08
548 598 2.633860 AAGCCACGGAAGAAGCTTG 58.366 52.632 2.10 0.00 45.88 4.01
554 604 1.872237 CGACTTTCAAGCCACGGAAGA 60.872 52.381 0.00 0.00 0.00 2.87
571 621 7.215568 CGTCAACCAAAAATGATACATTACGAC 59.784 37.037 0.00 0.00 0.00 4.34
582 633 3.488384 GCACACTCGTCAACCAAAAATGA 60.488 43.478 0.00 0.00 0.00 2.57
614 666 2.223829 CGTCCTGGCCTGACTTATAGTG 60.224 54.545 19.45 3.44 0.00 2.74
615 667 2.032620 CGTCCTGGCCTGACTTATAGT 58.967 52.381 19.45 0.00 0.00 2.12
617 669 1.410004 CCGTCCTGGCCTGACTTATA 58.590 55.000 19.45 0.00 0.00 0.98
633 685 3.717913 TCTATGGGTTTTATTAGGCCCGT 59.282 43.478 0.00 0.00 43.89 5.28
647 699 2.291605 GCTGGGGTTTTCTTCTATGGGT 60.292 50.000 0.00 0.00 0.00 4.51
651 703 3.269381 TGATGGCTGGGGTTTTCTTCTAT 59.731 43.478 0.00 0.00 0.00 1.98
700 762 1.493861 CAGGCTTCTCCTCTGATGGA 58.506 55.000 0.00 0.00 45.52 3.41
787 850 3.356814 GGCCTAAGTTTTGAGCCCA 57.643 52.632 0.00 0.00 37.66 5.36
810 875 4.424711 TCTTGTCCATGGGCCGGC 62.425 66.667 21.18 21.18 0.00 6.13
819 884 2.528818 CCTGGCCTGGTCTTGTCCA 61.529 63.158 20.28 0.00 36.00 4.02
820 885 2.352805 CCTGGCCTGGTCTTGTCC 59.647 66.667 20.28 0.00 0.00 4.02
835 900 1.375326 GAAAAGCCCGACCTGACCT 59.625 57.895 0.00 0.00 0.00 3.85
889 955 4.504916 CGCGAGGGGAGACAGCAG 62.505 72.222 0.00 0.00 0.00 4.24
891 957 4.500116 GTCGCGAGGGGAGACAGC 62.500 72.222 10.24 0.00 43.98 4.40
892 958 4.180946 CGTCGCGAGGGGAGACAG 62.181 72.222 20.58 0.00 44.69 3.51
899 967 3.170585 GAACGAACGTCGCGAGGG 61.171 66.667 29.83 18.33 45.12 4.30
911 979 1.202371 AGAGCAACAACAGTCGAACGA 60.202 47.619 0.00 0.00 0.00 3.85
987 1069 1.264826 GCCGTCATTTGTGTTTACCGT 59.735 47.619 0.00 0.00 0.00 4.83
1074 1156 1.445095 GCCTCTGACATGGAGCGAT 59.555 57.895 0.00 0.00 0.00 4.58
1171 1253 1.920835 GAGAAGACAGGGGCAGGGT 60.921 63.158 0.00 0.00 0.00 4.34
1310 1409 6.461509 GGCAGAACTAATGGATAAAATGTGGG 60.462 42.308 0.00 0.00 0.00 4.61
1452 1557 2.621338 CCTAGCGAACAAGCATCTGAA 58.379 47.619 0.00 0.00 40.15 3.02
1458 1563 1.202710 TGTTTCCCTAGCGAACAAGCA 60.203 47.619 0.00 0.00 40.15 3.91
1602 1727 6.925610 TGAGCATTGGTTAGCTAATTAGTG 57.074 37.500 9.88 9.69 42.04 2.74
1632 1757 8.616076 CCAAATAGAACGCTATCAGAAGAAATT 58.384 33.333 0.00 0.00 36.31 1.82
1633 1758 7.987458 TCCAAATAGAACGCTATCAGAAGAAAT 59.013 33.333 0.00 0.00 36.31 2.17
1634 1759 7.327975 TCCAAATAGAACGCTATCAGAAGAAA 58.672 34.615 0.00 0.00 36.31 2.52
1635 1760 6.873997 TCCAAATAGAACGCTATCAGAAGAA 58.126 36.000 0.00 0.00 36.31 2.52
1636 1761 6.465439 TCCAAATAGAACGCTATCAGAAGA 57.535 37.500 0.00 0.00 36.31 2.87
1637 1762 6.347240 GCATCCAAATAGAACGCTATCAGAAG 60.347 42.308 0.00 0.00 36.31 2.85
1638 1763 5.466728 GCATCCAAATAGAACGCTATCAGAA 59.533 40.000 0.00 0.00 36.31 3.02
1641 1766 4.065088 GGCATCCAAATAGAACGCTATCA 58.935 43.478 0.00 0.00 36.31 2.15
1797 1980 2.133553 CCTATGTTGAGAGCATGCTCG 58.866 52.381 35.50 21.34 46.90 5.03
1800 1983 3.465742 TCTCCTATGTTGAGAGCATGC 57.534 47.619 10.51 10.51 34.03 4.06
1823 2006 7.042051 CCACATACCATTAGTAGTAATGCACAC 60.042 40.741 20.58 0.00 42.99 3.82
1893 2076 3.303791 GCTCCCTGTACTTTGAACAAACG 60.304 47.826 0.00 0.00 0.00 3.60
1910 2093 1.767759 ACTTAACATGCATGGCTCCC 58.232 50.000 29.41 0.00 0.00 4.30
1943 2127 0.981183 ACCATCCTAACTTGCCGTGA 59.019 50.000 0.00 0.00 0.00 4.35
1949 2133 6.531503 TGAAGACTCTACCATCCTAACTTG 57.468 41.667 0.00 0.00 0.00 3.16
1954 2138 8.840200 AAACTATTGAAGACTCTACCATCCTA 57.160 34.615 0.00 0.00 0.00 2.94
1959 2143 7.123847 GGTAGGAAACTATTGAAGACTCTACCA 59.876 40.741 0.00 0.00 46.56 3.25
1963 2147 7.894364 TGTAGGTAGGAAACTATTGAAGACTCT 59.106 37.037 0.00 0.00 46.56 3.24
1964 2148 8.064336 TGTAGGTAGGAAACTATTGAAGACTC 57.936 38.462 0.00 0.00 46.56 3.36
2045 2229 4.913335 TGAAACTAACGAGACTGTGAGT 57.087 40.909 0.00 0.00 34.92 3.41
2049 2233 6.978338 TCACTATTGAAACTAACGAGACTGT 58.022 36.000 0.00 0.00 0.00 3.55
2104 2288 8.868916 GCACACTTTGAGATTTGTTAAGAAAAA 58.131 29.630 1.47 0.00 0.00 1.94
2110 2301 7.275888 AGATGCACACTTTGAGATTTGTTAA 57.724 32.000 0.00 0.00 0.00 2.01
2130 2321 9.599322 GAGAAAACAACAAGTACAACATAGATG 57.401 33.333 0.00 0.00 0.00 2.90
2131 2322 9.337396 TGAGAAAACAACAAGTACAACATAGAT 57.663 29.630 0.00 0.00 0.00 1.98
2192 2411 9.171877 CTAATCTCAAAGCTCTCATAAAGGTTT 57.828 33.333 0.00 0.00 43.24 3.27
2199 2418 8.072321 ACAAGACTAATCTCAAAGCTCTCATA 57.928 34.615 0.00 0.00 32.34 2.15
2262 2489 5.181245 GCTTGCCTGTAAGTGACAAGAATAA 59.819 40.000 5.30 0.00 40.06 1.40
2267 2494 2.221169 TGCTTGCCTGTAAGTGACAAG 58.779 47.619 0.00 0.00 37.70 3.16
2536 2765 9.376075 GTCTTAGATGATGAAAAGAACTGATCA 57.624 33.333 0.00 0.00 30.24 2.92
2560 2789 7.117379 ACAAAGCTACGTGAATAGGTAAAAGTC 59.883 37.037 0.00 0.00 32.61 3.01
2567 2796 4.243270 GACACAAAGCTACGTGAATAGGT 58.757 43.478 19.31 0.00 36.91 3.08
2570 2799 3.247442 CCGACACAAAGCTACGTGAATA 58.753 45.455 19.31 0.00 36.91 1.75
2577 2806 1.145803 GGTCACCGACACAAAGCTAC 58.854 55.000 0.00 0.00 33.68 3.58
2708 2938 5.743026 TTTTGTGAAACGCTGATCACTAA 57.257 34.783 12.03 8.86 44.86 2.24
2751 2982 5.357878 GCTAAAGACATCAATGACCCAATGA 59.642 40.000 0.00 0.00 0.00 2.57
2840 3073 3.080300 TCGTTTGCCAACCATAAGGAT 57.920 42.857 0.00 0.00 38.69 3.24
2855 3104 3.320541 TCCATTGAAAACCAGCATCGTTT 59.679 39.130 0.00 0.00 34.95 3.60
2903 3160 8.956426 AGTGATTTCTGTAAAAGTTTGAGTTGA 58.044 29.630 0.00 0.00 0.00 3.18
2904 3161 9.226345 GAGTGATTTCTGTAAAAGTTTGAGTTG 57.774 33.333 0.00 0.00 0.00 3.16
2905 3162 8.122952 CGAGTGATTTCTGTAAAAGTTTGAGTT 58.877 33.333 0.00 0.00 0.00 3.01
2906 3163 7.494625 TCGAGTGATTTCTGTAAAAGTTTGAGT 59.505 33.333 0.00 0.00 0.00 3.41
2907 3164 7.851508 TCGAGTGATTTCTGTAAAAGTTTGAG 58.148 34.615 0.00 0.00 0.00 3.02
2908 3165 7.780008 TCGAGTGATTTCTGTAAAAGTTTGA 57.220 32.000 0.00 0.00 0.00 2.69
2909 3166 8.122952 AGTTCGAGTGATTTCTGTAAAAGTTTG 58.877 33.333 0.00 0.00 0.00 2.93
2910 3167 8.122952 CAGTTCGAGTGATTTCTGTAAAAGTTT 58.877 33.333 0.00 0.00 0.00 2.66
2911 3168 7.630924 CAGTTCGAGTGATTTCTGTAAAAGTT 58.369 34.615 0.00 0.00 0.00 2.66
2914 3171 5.525745 TGCAGTTCGAGTGATTTCTGTAAAA 59.474 36.000 1.21 0.00 0.00 1.52
2921 3178 3.878086 TGTTGCAGTTCGAGTGATTTC 57.122 42.857 1.21 0.00 0.00 2.17
2946 3203 5.184096 TGCAAACAGGTAAAGACACAGAAAA 59.816 36.000 0.00 0.00 0.00 2.29
2952 3209 5.181690 TGATTGCAAACAGGTAAAGACAC 57.818 39.130 1.71 0.00 0.00 3.67
2954 3211 5.831997 AGTTGATTGCAAACAGGTAAAGAC 58.168 37.500 9.49 3.73 35.42 3.01
2978 3235 7.868792 AAGAGATCAAGGAGAATGGATCATA 57.131 36.000 0.00 0.00 38.84 2.15
2983 3240 5.960811 AGTGTAAGAGATCAAGGAGAATGGA 59.039 40.000 0.00 0.00 0.00 3.41
2984 3241 6.232581 AGTGTAAGAGATCAAGGAGAATGG 57.767 41.667 0.00 0.00 0.00 3.16
3009 3266 6.120378 TCAGAAACGTACTCTATAGCACTG 57.880 41.667 0.00 0.00 0.00 3.66
3010 3267 6.754702 TTCAGAAACGTACTCTATAGCACT 57.245 37.500 0.00 0.00 0.00 4.40
3049 3306 6.899089 TCTTAGAAGCCCATGTCATCATTTA 58.101 36.000 0.00 0.00 31.15 1.40
3180 3437 9.927081 ACTTCCTCCAGAAATAATGACATTAAT 57.073 29.630 11.80 0.88 32.88 1.40
3621 3878 8.182227 GTGCAGAAAAAGTCCCAAGTTATATAC 58.818 37.037 0.00 0.00 0.00 1.47
3632 3889 6.928492 TGAAAATATTGTGCAGAAAAAGTCCC 59.072 34.615 0.00 0.00 0.00 4.46
3708 3965 6.982852 TGTCCCGAATAAAACAGCATAAAAA 58.017 32.000 0.00 0.00 0.00 1.94
3726 3983 4.770795 ACATCTATTTTCCTCTTGTCCCG 58.229 43.478 0.00 0.00 0.00 5.14
3767 4024 0.662619 CTTGCACATCAACCACGTGT 59.337 50.000 15.65 0.00 33.13 4.49
3770 4027 0.662619 ACACTTGCACATCAACCACG 59.337 50.000 0.00 0.00 0.00 4.94
3802 4059 2.675844 TCGTCACACACCAAAACAGAAG 59.324 45.455 0.00 0.00 0.00 2.85
3805 4062 2.354510 ACATCGTCACACACCAAAACAG 59.645 45.455 0.00 0.00 0.00 3.16
3806 4063 2.360844 ACATCGTCACACACCAAAACA 58.639 42.857 0.00 0.00 0.00 2.83
3813 4070 3.232213 ACTCCATACATCGTCACACAC 57.768 47.619 0.00 0.00 0.00 3.82
3831 4090 5.701290 GTCACACTTTATGACCTAAGCAACT 59.299 40.000 0.00 0.00 40.56 3.16
3877 4136 1.400737 ATCACCTAGTGCCTACGGTC 58.599 55.000 0.00 0.00 32.98 4.79
3965 4226 5.905331 AGTTAATCCTGGTCCACATCTCATA 59.095 40.000 0.00 0.00 0.00 2.15
4014 4275 2.163412 AGAGTTCAGTGAGAGATGCGAC 59.837 50.000 0.00 0.00 0.00 5.19
4106 4367 6.507023 CAAGACACAAACCATAGCTTTCTTT 58.493 36.000 0.00 0.00 0.00 2.52
4193 4454 8.328758 TGTCAGTCTGGGACAAATAGAAATAAT 58.671 33.333 0.00 0.00 41.96 1.28
4362 4626 0.963856 ATGCAGCCATGTCCACACAG 60.964 55.000 0.00 0.00 35.41 3.66
4409 4673 0.322648 TCGCATGGGGCATCATCTAG 59.677 55.000 10.21 0.00 45.17 2.43
4422 4686 4.557605 GCCGGCACCAATCGCATG 62.558 66.667 24.80 0.00 0.00 4.06
4425 4689 4.557605 CATGCCGGCACCAATCGC 62.558 66.667 35.50 0.00 0.00 4.58
4426 4690 0.884259 TATCATGCCGGCACCAATCG 60.884 55.000 35.50 15.99 0.00 3.34
4427 4691 1.317613 TTATCATGCCGGCACCAATC 58.682 50.000 35.50 0.00 0.00 2.67
4428 4692 1.888512 GATTATCATGCCGGCACCAAT 59.111 47.619 35.50 26.03 0.00 3.16
4435 4699 5.653769 AGAATATTTGGGATTATCATGCCGG 59.346 40.000 0.00 0.00 44.05 6.13
4436 4700 6.151648 ACAGAATATTTGGGATTATCATGCCG 59.848 38.462 0.00 0.00 44.05 5.69
4595 4860 1.968017 ACGCAGTCACAAGCCATGG 60.968 57.895 7.63 7.63 29.74 3.66
4596 4861 1.208358 CACGCAGTCACAAGCCATG 59.792 57.895 0.00 0.00 41.61 3.66
4620 4885 9.726438 AATAGGAATTTATACCGAAGAATCAGG 57.274 33.333 0.00 0.00 0.00 3.86
4704 4969 9.013229 TCAATCTGCAAGTTAACACTGATAAAT 57.987 29.630 8.61 0.00 31.60 1.40
4705 4970 8.389779 TCAATCTGCAAGTTAACACTGATAAA 57.610 30.769 8.61 2.21 31.60 1.40
4707 4972 7.119699 CCTTCAATCTGCAAGTTAACACTGATA 59.880 37.037 8.61 0.00 31.60 2.15
4848 5198 7.525688 TCAATATCATCTTGACGTGAAACTC 57.474 36.000 0.00 0.00 31.75 3.01
4857 5207 8.068977 GCTGAAGTTGATCAATATCATCTTGAC 58.931 37.037 20.03 2.92 45.66 3.18
4870 5220 3.421919 TGACATGGCTGAAGTTGATCA 57.578 42.857 0.00 0.00 0.00 2.92
4871 5221 3.425359 CGTTGACATGGCTGAAGTTGATC 60.425 47.826 0.00 0.00 0.00 2.92
4885 5235 0.884704 GGTCACACTGCCGTTGACAT 60.885 55.000 17.99 0.00 0.00 3.06
4888 5238 2.110213 GGGTCACACTGCCGTTGA 59.890 61.111 0.00 0.00 0.00 3.18
4913 5263 3.821033 ACTAAAAGAAGTCCATGTGCACC 59.179 43.478 15.69 0.00 0.00 5.01
4942 5292 9.831737 GCGATATCATGCTTTATTTCTGTATTT 57.168 29.630 3.12 0.00 0.00 1.40
4944 5294 7.607607 TGGCGATATCATGCTTTATTTCTGTAT 59.392 33.333 3.12 0.00 0.00 2.29
4945 5295 6.934083 TGGCGATATCATGCTTTATTTCTGTA 59.066 34.615 3.12 0.00 0.00 2.74
4946 5296 5.764686 TGGCGATATCATGCTTTATTTCTGT 59.235 36.000 3.12 0.00 0.00 3.41
4947 5297 6.148315 TCTGGCGATATCATGCTTTATTTCTG 59.852 38.462 3.12 0.00 0.00 3.02
4948 5298 6.233434 TCTGGCGATATCATGCTTTATTTCT 58.767 36.000 3.12 0.00 0.00 2.52
4949 5299 6.486253 TCTGGCGATATCATGCTTTATTTC 57.514 37.500 3.12 0.00 0.00 2.17
4951 5301 7.255035 GCATATCTGGCGATATCATGCTTTATT 60.255 37.037 12.34 0.00 40.10 1.40
4952 5302 6.204301 GCATATCTGGCGATATCATGCTTTAT 59.796 38.462 12.34 3.52 40.10 1.40
4953 5303 5.525012 GCATATCTGGCGATATCATGCTTTA 59.475 40.000 12.34 0.00 40.10 1.85
4954 5304 4.334759 GCATATCTGGCGATATCATGCTTT 59.665 41.667 12.34 0.00 40.10 3.51
4955 5305 3.875727 GCATATCTGGCGATATCATGCTT 59.124 43.478 12.34 0.00 40.10 3.91
4956 5306 3.118519 TGCATATCTGGCGATATCATGCT 60.119 43.478 17.68 0.00 40.10 3.79
4957 5307 3.200483 TGCATATCTGGCGATATCATGC 58.800 45.455 12.60 12.60 40.10 4.06
4958 5308 7.668525 ATAATGCATATCTGGCGATATCATG 57.331 36.000 0.00 0.00 40.10 3.07
4959 5309 8.591940 AGTATAATGCATATCTGGCGATATCAT 58.408 33.333 0.00 10.80 40.10 2.45
4960 5310 7.955918 AGTATAATGCATATCTGGCGATATCA 58.044 34.615 0.00 9.56 40.10 2.15
4969 5319 6.806388 TGGCACAAGTATAATGCATATCTG 57.194 37.500 0.00 0.00 41.27 2.90
4995 5345 8.189709 TGAAAGAATGACGAAACTATCATCAG 57.810 34.615 0.00 0.00 33.08 2.90
5252 5603 0.037046 CCTGCCCAGCATTCCAAAAC 60.037 55.000 0.00 0.00 38.13 2.43
5266 5617 0.895100 TGGTGATCTTGTTGCCTGCC 60.895 55.000 0.00 0.00 0.00 4.85
5307 5658 2.925563 GCAACACCAGAAATAGCAATGC 59.074 45.455 0.00 0.00 0.00 3.56
5541 5897 2.494888 TATCCATCTTCAGGGAGCCA 57.505 50.000 0.00 0.00 36.45 4.75
5571 5928 3.006728 CGGGACAGGGGTTAGGCA 61.007 66.667 0.00 0.00 0.00 4.75
5587 5944 2.947118 TAACGCTAGATGCACCGCCG 62.947 60.000 0.00 0.00 43.06 6.46
5596 5953 3.057456 CACGCCCTCTAATAACGCTAGAT 60.057 47.826 0.00 0.00 0.00 1.98
5606 5963 1.134401 CACATCCACACGCCCTCTAAT 60.134 52.381 0.00 0.00 0.00 1.73
5609 5966 2.217038 ACACATCCACACGCCCTCT 61.217 57.895 0.00 0.00 0.00 3.69
5643 6000 2.170607 CCAATACCGACTGAATCCCACT 59.829 50.000 0.00 0.00 0.00 4.00
5690 6047 5.706916 ACTTATAGACACACGAACGAACAT 58.293 37.500 0.14 0.00 0.00 2.71
5701 6068 7.727578 TGGAAGGATACAACTTATAGACACA 57.272 36.000 0.00 0.00 41.41 3.72
5709 6076 8.778059 AGAACCATATTGGAAGGATACAACTTA 58.222 33.333 0.00 0.00 40.96 2.24
5711 6078 7.127955 AGAGAACCATATTGGAAGGATACAACT 59.872 37.037 0.00 0.00 40.96 3.16
5715 6082 7.509546 TGAAGAGAACCATATTGGAAGGATAC 58.490 38.462 0.00 0.00 40.96 2.24
5716 6083 7.690454 TGAAGAGAACCATATTGGAAGGATA 57.310 36.000 0.00 0.00 40.96 2.59
5728 6095 3.491619 CCATCGACGATGAAGAGAACCAT 60.492 47.826 33.73 0.00 42.09 3.55
5799 6168 7.205297 TGTTGTACTAAATATAGTCGGGAAGC 58.795 38.462 0.00 0.00 41.49 3.86
5826 6195 0.249826 CACAACGGGCCAAGCAAAAT 60.250 50.000 4.39 0.00 0.00 1.82
5844 6213 2.386100 GCCATCATCACCCCTCCCA 61.386 63.158 0.00 0.00 0.00 4.37
5878 6247 2.159558 CGACGACTAAAGCACTAGAGCA 60.160 50.000 14.80 0.00 36.85 4.26
5883 6252 2.353889 CCTAGCGACGACTAAAGCACTA 59.646 50.000 0.00 0.00 0.00 2.74
5937 6306 8.081633 TCATGGCAATACAAAGAACACTAAAAG 58.918 33.333 0.00 0.00 0.00 2.27
5955 6324 5.363292 ACCTATGCATTATTTGTCATGGCAA 59.637 36.000 9.09 9.09 0.00 4.52
6032 6408 6.777213 ATAGTTCTCCAGCCGTATATTAGG 57.223 41.667 0.00 0.00 0.00 2.69
6075 6451 5.417894 GGTAGGAAATTAAACTTGACCAGGG 59.582 44.000 0.00 0.00 0.00 4.45
6126 6502 4.412199 ACCTTGATATTTGCTAGGTAGGCA 59.588 41.667 0.00 0.00 39.22 4.75
6148 6524 0.467290 TGGGGTTCACTTGGCTTGAC 60.467 55.000 0.00 0.00 0.00 3.18
6149 6525 0.260230 TTGGGGTTCACTTGGCTTGA 59.740 50.000 0.00 0.00 0.00 3.02
6181 6876 4.135153 CCGTGAGAGCGACCCAGG 62.135 72.222 0.00 0.00 0.00 4.45
6213 6908 7.612244 TGGAATCTATGTTTACCCGATCAAAAA 59.388 33.333 0.00 0.00 0.00 1.94
6214 6909 7.113437 TGGAATCTATGTTTACCCGATCAAAA 58.887 34.615 0.00 0.00 0.00 2.44
6215 6910 6.654959 TGGAATCTATGTTTACCCGATCAAA 58.345 36.000 0.00 0.00 0.00 2.69
6216 6911 6.241882 TGGAATCTATGTTTACCCGATCAA 57.758 37.500 0.00 0.00 0.00 2.57
6217 6912 5.880164 TGGAATCTATGTTTACCCGATCA 57.120 39.130 0.00 0.00 0.00 2.92
6218 6913 8.718734 GTTAATGGAATCTATGTTTACCCGATC 58.281 37.037 0.00 0.00 0.00 3.69
6219 6914 7.664318 GGTTAATGGAATCTATGTTTACCCGAT 59.336 37.037 0.00 0.00 0.00 4.18
6220 6915 6.993902 GGTTAATGGAATCTATGTTTACCCGA 59.006 38.462 0.00 0.00 0.00 5.14
6221 6916 6.768861 TGGTTAATGGAATCTATGTTTACCCG 59.231 38.462 0.00 0.00 0.00 5.28
6222 6917 7.013942 GGTGGTTAATGGAATCTATGTTTACCC 59.986 40.741 0.00 0.00 0.00 3.69
6223 6918 7.778382 AGGTGGTTAATGGAATCTATGTTTACC 59.222 37.037 0.00 0.00 0.00 2.85
6224 6919 8.747538 AGGTGGTTAATGGAATCTATGTTTAC 57.252 34.615 0.00 0.00 0.00 2.01
6226 6921 7.502561 GCTAGGTGGTTAATGGAATCTATGTTT 59.497 37.037 0.00 0.00 0.00 2.83
6227 6922 6.998673 GCTAGGTGGTTAATGGAATCTATGTT 59.001 38.462 0.00 0.00 0.00 2.71
6228 6923 6.101150 TGCTAGGTGGTTAATGGAATCTATGT 59.899 38.462 0.00 0.00 0.00 2.29
6229 6924 6.428159 GTGCTAGGTGGTTAATGGAATCTATG 59.572 42.308 0.00 0.00 0.00 2.23
6230 6925 6.101150 TGTGCTAGGTGGTTAATGGAATCTAT 59.899 38.462 0.00 0.00 0.00 1.98
6231 6926 5.427157 TGTGCTAGGTGGTTAATGGAATCTA 59.573 40.000 0.00 0.00 0.00 1.98
6232 6927 4.227300 TGTGCTAGGTGGTTAATGGAATCT 59.773 41.667 0.00 0.00 0.00 2.40
6233 6928 4.523083 TGTGCTAGGTGGTTAATGGAATC 58.477 43.478 0.00 0.00 0.00 2.52
6234 6929 4.584638 TGTGCTAGGTGGTTAATGGAAT 57.415 40.909 0.00 0.00 0.00 3.01
6235 6930 4.202524 ACTTGTGCTAGGTGGTTAATGGAA 60.203 41.667 0.00 0.00 0.00 3.53
6236 6931 3.329520 ACTTGTGCTAGGTGGTTAATGGA 59.670 43.478 0.00 0.00 0.00 3.41
6237 6932 3.686016 ACTTGTGCTAGGTGGTTAATGG 58.314 45.455 0.00 0.00 0.00 3.16
6238 6933 5.705609 AAACTTGTGCTAGGTGGTTAATG 57.294 39.130 0.00 0.00 0.00 1.90
6239 6934 7.172342 TGATAAACTTGTGCTAGGTGGTTAAT 58.828 34.615 0.00 0.00 0.00 1.40
6240 6935 6.535540 TGATAAACTTGTGCTAGGTGGTTAA 58.464 36.000 0.00 0.00 0.00 2.01
6241 6936 6.116711 TGATAAACTTGTGCTAGGTGGTTA 57.883 37.500 0.00 0.00 0.00 2.85
6242 6937 4.980573 TGATAAACTTGTGCTAGGTGGTT 58.019 39.130 0.00 0.00 0.00 3.67
6243 6938 4.634012 TGATAAACTTGTGCTAGGTGGT 57.366 40.909 0.00 0.00 0.00 4.16
6244 6939 5.957842 TTTGATAAACTTGTGCTAGGTGG 57.042 39.130 0.00 0.00 0.00 4.61
6267 6962 5.137551 AGTATGTTGTGCTAGGTGGTTTTT 58.862 37.500 0.00 0.00 0.00 1.94
6268 6963 4.725490 AGTATGTTGTGCTAGGTGGTTTT 58.275 39.130 0.00 0.00 0.00 2.43
6269 6964 4.367039 AGTATGTTGTGCTAGGTGGTTT 57.633 40.909 0.00 0.00 0.00 3.27
6270 6965 4.324267 GAAGTATGTTGTGCTAGGTGGTT 58.676 43.478 0.00 0.00 0.00 3.67
6271 6966 3.307480 GGAAGTATGTTGTGCTAGGTGGT 60.307 47.826 0.00 0.00 0.00 4.16
6272 6967 3.055094 AGGAAGTATGTTGTGCTAGGTGG 60.055 47.826 0.00 0.00 0.00 4.61
6273 6968 3.935203 CAGGAAGTATGTTGTGCTAGGTG 59.065 47.826 0.00 0.00 0.00 4.00
6274 6969 3.055094 CCAGGAAGTATGTTGTGCTAGGT 60.055 47.826 0.00 0.00 0.00 3.08
6275 6970 3.055094 ACCAGGAAGTATGTTGTGCTAGG 60.055 47.826 0.00 0.00 0.00 3.02
6276 6971 4.207891 ACCAGGAAGTATGTTGTGCTAG 57.792 45.455 0.00 0.00 0.00 3.42
6277 6972 4.634012 AACCAGGAAGTATGTTGTGCTA 57.366 40.909 0.00 0.00 0.00 3.49
6278 6973 3.508845 AACCAGGAAGTATGTTGTGCT 57.491 42.857 0.00 0.00 0.00 4.40
6279 6974 4.069304 TGTAACCAGGAAGTATGTTGTGC 58.931 43.478 0.00 0.00 0.00 4.57
6280 6975 5.937540 TGATGTAACCAGGAAGTATGTTGTG 59.062 40.000 0.00 0.00 0.00 3.33
6281 6976 6.013725 TCTGATGTAACCAGGAAGTATGTTGT 60.014 38.462 0.00 0.00 32.73 3.32
6282 6977 6.406370 TCTGATGTAACCAGGAAGTATGTTG 58.594 40.000 0.00 0.00 32.73 3.33
6283 6978 6.440647 TCTCTGATGTAACCAGGAAGTATGTT 59.559 38.462 0.00 0.00 32.73 2.71
6284 6979 5.958380 TCTCTGATGTAACCAGGAAGTATGT 59.042 40.000 0.00 0.00 32.73 2.29
6285 6980 6.471233 TCTCTGATGTAACCAGGAAGTATG 57.529 41.667 0.00 0.00 32.73 2.39
6286 6981 7.682787 AATCTCTGATGTAACCAGGAAGTAT 57.317 36.000 0.00 0.00 32.73 2.12
6287 6982 7.618117 TGTAATCTCTGATGTAACCAGGAAGTA 59.382 37.037 0.00 0.00 32.73 2.24
6288 6983 6.440647 TGTAATCTCTGATGTAACCAGGAAGT 59.559 38.462 0.00 0.00 32.73 3.01
6289 6984 6.878317 TGTAATCTCTGATGTAACCAGGAAG 58.122 40.000 0.00 0.00 32.73 3.46
6290 6985 6.867519 TGTAATCTCTGATGTAACCAGGAA 57.132 37.500 0.00 0.00 32.73 3.36
6291 6986 6.867519 TTGTAATCTCTGATGTAACCAGGA 57.132 37.500 0.00 0.00 32.73 3.86
6292 6987 7.106239 ACTTTGTAATCTCTGATGTAACCAGG 58.894 38.462 0.00 0.00 32.73 4.45
6293 6988 8.037758 AGACTTTGTAATCTCTGATGTAACCAG 58.962 37.037 0.00 0.00 0.00 4.00
6294 6989 7.907389 AGACTTTGTAATCTCTGATGTAACCA 58.093 34.615 0.00 0.00 0.00 3.67
6295 6990 9.522804 CTAGACTTTGTAATCTCTGATGTAACC 57.477 37.037 0.00 0.00 0.00 2.85
6299 6994 8.254508 GGTTCTAGACTTTGTAATCTCTGATGT 58.745 37.037 0.00 0.00 0.00 3.06
6300 6995 7.433719 CGGTTCTAGACTTTGTAATCTCTGATG 59.566 40.741 0.00 0.00 0.00 3.07
6301 6996 7.122948 ACGGTTCTAGACTTTGTAATCTCTGAT 59.877 37.037 0.00 0.00 0.00 2.90
6302 6997 6.433404 ACGGTTCTAGACTTTGTAATCTCTGA 59.567 38.462 0.00 0.00 0.00 3.27
6303 6998 6.622549 ACGGTTCTAGACTTTGTAATCTCTG 58.377 40.000 0.00 0.00 0.00 3.35
6304 6999 6.837471 ACGGTTCTAGACTTTGTAATCTCT 57.163 37.500 0.00 0.00 0.00 3.10
6305 7000 6.971756 GGTACGGTTCTAGACTTTGTAATCTC 59.028 42.308 0.00 0.00 0.00 2.75
6306 7001 6.435277 TGGTACGGTTCTAGACTTTGTAATCT 59.565 38.462 0.00 0.00 0.00 2.40
6307 7002 6.624423 TGGTACGGTTCTAGACTTTGTAATC 58.376 40.000 0.00 0.00 0.00 1.75
6308 7003 6.594788 TGGTACGGTTCTAGACTTTGTAAT 57.405 37.500 0.00 0.00 0.00 1.89
6309 7004 6.392354 CATGGTACGGTTCTAGACTTTGTAA 58.608 40.000 0.00 0.00 0.00 2.41
6310 7005 5.622914 GCATGGTACGGTTCTAGACTTTGTA 60.623 44.000 0.00 0.00 0.00 2.41
6311 7006 4.817517 CATGGTACGGTTCTAGACTTTGT 58.182 43.478 0.00 0.00 0.00 2.83
6312 7007 3.617263 GCATGGTACGGTTCTAGACTTTG 59.383 47.826 0.00 0.00 0.00 2.77
6313 7008 3.369157 GGCATGGTACGGTTCTAGACTTT 60.369 47.826 0.00 0.00 0.00 2.66
6314 7009 2.167900 GGCATGGTACGGTTCTAGACTT 59.832 50.000 0.00 0.00 0.00 3.01
6315 7010 1.755380 GGCATGGTACGGTTCTAGACT 59.245 52.381 0.00 0.00 0.00 3.24
6316 7011 1.479323 TGGCATGGTACGGTTCTAGAC 59.521 52.381 0.00 0.00 0.00 2.59
6317 7012 1.479323 GTGGCATGGTACGGTTCTAGA 59.521 52.381 0.00 0.00 0.00 2.43
6318 7013 1.206132 TGTGGCATGGTACGGTTCTAG 59.794 52.381 0.00 0.00 0.00 2.43
6319 7014 1.268066 TGTGGCATGGTACGGTTCTA 58.732 50.000 0.00 0.00 0.00 2.10
6320 7015 0.398696 TTGTGGCATGGTACGGTTCT 59.601 50.000 0.00 0.00 0.00 3.01
6321 7016 0.519961 GTTGTGGCATGGTACGGTTC 59.480 55.000 0.00 0.00 0.00 3.62
6322 7017 0.179015 TGTTGTGGCATGGTACGGTT 60.179 50.000 0.00 0.00 0.00 4.44
6323 7018 0.037590 ATGTTGTGGCATGGTACGGT 59.962 50.000 0.00 0.00 0.00 4.83
6324 7019 2.031258 TATGTTGTGGCATGGTACGG 57.969 50.000 0.00 0.00 0.00 4.02
6325 7020 3.202097 TCATATGTTGTGGCATGGTACG 58.798 45.455 1.90 0.00 0.00 3.67
6326 7021 3.003689 GCTCATATGTTGTGGCATGGTAC 59.996 47.826 1.90 0.00 0.00 3.34
6327 7022 3.213506 GCTCATATGTTGTGGCATGGTA 58.786 45.455 1.90 0.00 0.00 3.25
6328 7023 2.026641 GCTCATATGTTGTGGCATGGT 58.973 47.619 1.90 0.00 0.00 3.55
6329 7024 2.025898 TGCTCATATGTTGTGGCATGG 58.974 47.619 1.90 0.00 33.09 3.66
6330 7025 2.946990 TCTGCTCATATGTTGTGGCATG 59.053 45.455 1.90 0.00 35.74 4.06
6331 7026 3.286329 TCTGCTCATATGTTGTGGCAT 57.714 42.857 1.90 0.00 35.74 4.40
6332 7027 2.785540 TCTGCTCATATGTTGTGGCA 57.214 45.000 1.90 6.32 35.30 4.92
6333 7028 2.357009 CCTTCTGCTCATATGTTGTGGC 59.643 50.000 1.90 2.23 0.00 5.01
6334 7029 3.614092 ACCTTCTGCTCATATGTTGTGG 58.386 45.455 1.90 0.83 0.00 4.17
6335 7030 4.095483 GGAACCTTCTGCTCATATGTTGTG 59.905 45.833 1.90 0.00 0.00 3.33
6336 7031 4.263462 TGGAACCTTCTGCTCATATGTTGT 60.263 41.667 1.90 0.00 0.00 3.32
6337 7032 4.264253 TGGAACCTTCTGCTCATATGTTG 58.736 43.478 1.90 0.00 0.00 3.33
6338 7033 4.574674 TGGAACCTTCTGCTCATATGTT 57.425 40.909 1.90 0.00 0.00 2.71
6339 7034 4.785346 ATGGAACCTTCTGCTCATATGT 57.215 40.909 1.90 0.00 0.00 2.29
6340 7035 4.694509 GCTATGGAACCTTCTGCTCATATG 59.305 45.833 0.00 0.00 0.00 1.78
6341 7036 4.263243 GGCTATGGAACCTTCTGCTCATAT 60.263 45.833 0.00 0.00 0.00 1.78
6342 7037 3.071602 GGCTATGGAACCTTCTGCTCATA 59.928 47.826 0.00 0.00 0.00 2.15
6343 7038 2.158696 GGCTATGGAACCTTCTGCTCAT 60.159 50.000 0.00 0.00 0.00 2.90
6344 7039 1.210478 GGCTATGGAACCTTCTGCTCA 59.790 52.381 0.00 0.00 0.00 4.26
6345 7040 1.808133 CGGCTATGGAACCTTCTGCTC 60.808 57.143 0.00 0.00 0.00 4.26
6346 7041 0.179000 CGGCTATGGAACCTTCTGCT 59.821 55.000 0.00 0.00 0.00 4.24
6347 7042 1.440145 GCGGCTATGGAACCTTCTGC 61.440 60.000 0.00 0.00 0.00 4.26
6348 7043 0.107703 TGCGGCTATGGAACCTTCTG 60.108 55.000 0.00 0.00 0.00 3.02
6349 7044 0.107654 GTGCGGCTATGGAACCTTCT 60.108 55.000 0.00 0.00 0.00 2.85
6350 7045 1.095807 GGTGCGGCTATGGAACCTTC 61.096 60.000 0.00 0.00 0.00 3.46
6351 7046 1.077716 GGTGCGGCTATGGAACCTT 60.078 57.895 0.00 0.00 0.00 3.50
6352 7047 1.562672 AAGGTGCGGCTATGGAACCT 61.563 55.000 0.00 1.09 43.10 3.50
6353 7048 1.077716 AAGGTGCGGCTATGGAACC 60.078 57.895 0.00 0.00 0.00 3.62
6354 7049 0.392461 TCAAGGTGCGGCTATGGAAC 60.392 55.000 0.00 0.00 0.00 3.62
6355 7050 0.392461 GTCAAGGTGCGGCTATGGAA 60.392 55.000 0.00 0.00 0.00 3.53
6356 7051 1.220749 GTCAAGGTGCGGCTATGGA 59.779 57.895 0.00 0.00 0.00 3.41
6357 7052 1.819632 GGTCAAGGTGCGGCTATGG 60.820 63.158 0.00 0.00 0.00 2.74
6358 7053 1.819632 GGGTCAAGGTGCGGCTATG 60.820 63.158 0.00 0.00 0.00 2.23
6359 7054 2.590092 GGGTCAAGGTGCGGCTAT 59.410 61.111 0.00 0.00 0.00 2.97
6360 7055 4.077184 CGGGTCAAGGTGCGGCTA 62.077 66.667 0.00 0.00 0.00 3.93
6363 7058 2.869503 ATTAGCGGGTCAAGGTGCGG 62.870 60.000 0.00 0.00 0.00 5.69
6364 7059 1.024579 AATTAGCGGGTCAAGGTGCG 61.025 55.000 0.00 0.00 0.00 5.34
6365 7060 1.173913 AAATTAGCGGGTCAAGGTGC 58.826 50.000 0.00 0.00 0.00 5.01
6366 7061 4.196193 TCATAAATTAGCGGGTCAAGGTG 58.804 43.478 0.00 0.00 0.00 4.00
6367 7062 4.451900 CTCATAAATTAGCGGGTCAAGGT 58.548 43.478 0.00 0.00 0.00 3.50
6368 7063 3.251004 GCTCATAAATTAGCGGGTCAAGG 59.749 47.826 0.00 0.00 0.00 3.61
6369 7064 3.876914 TGCTCATAAATTAGCGGGTCAAG 59.123 43.478 0.00 0.00 41.77 3.02
6370 7065 3.879998 TGCTCATAAATTAGCGGGTCAA 58.120 40.909 0.00 0.00 41.77 3.18
6371 7066 3.552132 TGCTCATAAATTAGCGGGTCA 57.448 42.857 0.00 0.00 41.77 4.02
6372 7067 3.625764 TGTTGCTCATAAATTAGCGGGTC 59.374 43.478 0.00 0.00 41.77 4.46
6373 7068 3.377172 GTGTTGCTCATAAATTAGCGGGT 59.623 43.478 0.00 0.00 41.77 5.28
6374 7069 3.546020 CGTGTTGCTCATAAATTAGCGGG 60.546 47.826 0.00 0.00 41.77 6.13
6375 7070 3.308595 TCGTGTTGCTCATAAATTAGCGG 59.691 43.478 0.00 0.00 41.77 5.52
6376 7071 4.514545 TCGTGTTGCTCATAAATTAGCG 57.485 40.909 0.00 0.00 41.77 4.26
6377 7072 7.406553 TGTAATCGTGTTGCTCATAAATTAGC 58.593 34.615 0.00 0.00 39.25 3.09
6378 7073 9.935682 AATGTAATCGTGTTGCTCATAAATTAG 57.064 29.630 0.00 0.00 0.00 1.73
6379 7074 9.929722 GAATGTAATCGTGTTGCTCATAAATTA 57.070 29.630 0.00 0.00 0.00 1.40
6380 7075 7.639850 CGAATGTAATCGTGTTGCTCATAAATT 59.360 33.333 0.00 0.00 38.01 1.82
6381 7076 7.125755 CGAATGTAATCGTGTTGCTCATAAAT 58.874 34.615 0.00 0.00 38.01 1.40
6382 7077 6.474364 CGAATGTAATCGTGTTGCTCATAAA 58.526 36.000 0.00 0.00 38.01 1.40
6383 7078 5.501736 GCGAATGTAATCGTGTTGCTCATAA 60.502 40.000 0.00 0.00 44.49 1.90
6384 7079 4.026062 GCGAATGTAATCGTGTTGCTCATA 60.026 41.667 0.00 0.00 44.49 2.15
6385 7080 3.242413 GCGAATGTAATCGTGTTGCTCAT 60.242 43.478 0.00 0.00 44.49 2.90
6386 7081 2.093625 GCGAATGTAATCGTGTTGCTCA 59.906 45.455 0.00 0.00 44.49 4.26
6387 7082 2.694043 GCGAATGTAATCGTGTTGCTC 58.306 47.619 0.00 0.00 44.49 4.26
6388 7083 1.060553 CGCGAATGTAATCGTGTTGCT 59.939 47.619 0.00 0.00 45.57 3.91
6389 7084 1.442765 CGCGAATGTAATCGTGTTGC 58.557 50.000 0.00 0.00 45.57 4.17
6394 7089 1.274596 GTGTCCGCGAATGTAATCGT 58.725 50.000 8.23 0.00 44.49 3.73
6395 7090 1.255342 CTGTGTCCGCGAATGTAATCG 59.745 52.381 8.23 0.00 45.41 3.34
6396 7091 1.004927 GCTGTGTCCGCGAATGTAATC 60.005 52.381 8.23 0.00 0.00 1.75
6397 7092 1.006832 GCTGTGTCCGCGAATGTAAT 58.993 50.000 8.23 0.00 0.00 1.89
6398 7093 2.451693 GCTGTGTCCGCGAATGTAA 58.548 52.632 8.23 0.00 0.00 2.41
6399 7094 4.178861 GCTGTGTCCGCGAATGTA 57.821 55.556 8.23 0.00 0.00 2.29
6407 7102 2.807045 GTGAGAGCGCTGTGTCCG 60.807 66.667 18.48 0.00 0.00 4.79
6408 7103 2.807045 CGTGAGAGCGCTGTGTCC 60.807 66.667 18.48 0.00 0.00 4.02
6409 7104 2.807045 CCGTGAGAGCGCTGTGTC 60.807 66.667 18.48 9.60 0.00 3.67
6411 7106 4.731612 AGCCGTGAGAGCGCTGTG 62.732 66.667 18.48 0.00 34.64 3.66
6412 7107 3.521529 AAAGCCGTGAGAGCGCTGT 62.522 57.895 18.48 12.55 34.64 4.40
6413 7108 2.740055 AAAGCCGTGAGAGCGCTG 60.740 61.111 18.48 0.00 34.64 5.18
6414 7109 2.740055 CAAAGCCGTGAGAGCGCT 60.740 61.111 11.27 11.27 34.64 5.92
6415 7110 3.793144 CCAAAGCCGTGAGAGCGC 61.793 66.667 0.00 0.00 34.64 5.92
6416 7111 2.048222 TCCAAAGCCGTGAGAGCG 60.048 61.111 0.00 0.00 34.64 5.03
6417 7112 1.016653 GTCTCCAAAGCCGTGAGAGC 61.017 60.000 0.00 0.00 35.91 4.09
6426 7121 1.515521 CGGTTGGGTGTCTCCAAAGC 61.516 60.000 0.84 0.84 46.98 3.51
6430 7125 3.948719 GGCGGTTGGGTGTCTCCA 61.949 66.667 0.00 0.00 38.11 3.86
6462 7164 2.316067 TGAGGAGGAATGAGGAAGGAGA 59.684 50.000 0.00 0.00 0.00 3.71
6495 7197 1.008449 AGGGGCAGGCTTAGAGAGTTA 59.992 52.381 0.00 0.00 0.00 2.24
6497 7199 0.689412 GAGGGGCAGGCTTAGAGAGT 60.689 60.000 0.00 0.00 0.00 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.