Multiple sequence alignment - TraesCS1D01G074800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G074800 chr1D 100.000 4002 0 0 1 4002 56531824 56527823 0.000000e+00 7391.0
1 TraesCS1D01G074800 chr1D 92.819 1323 56 12 2243 3563 56428634 56427349 0.000000e+00 1881.0
2 TraesCS1D01G074800 chr1D 88.896 1558 100 35 206 1735 56430807 56429295 0.000000e+00 1851.0
3 TraesCS1D01G074800 chr1D 87.709 1554 113 41 387 1893 56610980 56609458 0.000000e+00 1740.0
4 TraesCS1D01G074800 chr1D 93.040 977 52 8 2246 3221 56873868 56872907 0.000000e+00 1413.0
5 TraesCS1D01G074800 chr1D 90.076 1048 71 19 969 1991 56875272 56874233 0.000000e+00 1328.0
6 TraesCS1D01G074800 chr1D 92.079 808 52 5 2246 3052 56609053 56608257 0.000000e+00 1127.0
7 TraesCS1D01G074800 chr1D 86.604 642 49 12 308 923 56875904 56875274 0.000000e+00 675.0
8 TraesCS1D01G074800 chr1D 91.521 401 28 5 202 601 56612737 56612342 7.560000e-152 547.0
9 TraesCS1D01G074800 chr1D 86.270 437 33 6 354 787 56618435 56618023 2.190000e-122 449.0
10 TraesCS1D01G074800 chr1D 89.577 355 36 1 3648 4002 56637056 56636703 2.190000e-122 449.0
11 TraesCS1D01G074800 chr1D 91.870 246 20 0 3249 3494 56608151 56607906 1.060000e-90 344.0
12 TraesCS1D01G074800 chr1D 91.093 247 22 0 986 1232 57219349 57219103 6.410000e-88 335.0
13 TraesCS1D01G074800 chr1D 91.845 233 13 4 2018 2247 56609361 56609132 1.790000e-83 320.0
14 TraesCS1D01G074800 chr1D 86.713 286 31 3 1439 1724 57200749 57200471 1.080000e-80 311.0
15 TraesCS1D01G074800 chr1D 89.121 239 12 9 2018 2251 56874172 56873943 6.550000e-73 285.0
16 TraesCS1D01G074800 chr1D 92.386 197 15 0 1245 1441 57212907 57212711 8.470000e-72 281.0
17 TraesCS1D01G074800 chr1D 88.382 241 13 6 2018 2250 56428940 56428707 3.940000e-70 276.0
18 TraesCS1D01G074800 chr1D 95.758 165 7 0 3218 3382 56869549 56869385 2.370000e-67 267.0
19 TraesCS1D01G074800 chr1D 92.000 150 9 1 1 150 56612901 56612755 1.460000e-49 207.0
20 TraesCS1D01G074800 chr1D 89.286 168 15 3 202 368 56618615 56618450 1.460000e-49 207.0
21 TraesCS1D01G074800 chr1D 74.157 356 37 22 1864 2188 57073748 57073417 3.290000e-16 97.1
22 TraesCS1D01G074800 chr1D 91.667 60 4 1 148 207 455646662 455646720 9.220000e-12 82.4
23 TraesCS1D01G074800 chr1D 93.878 49 3 0 1 49 56611220 56611172 1.540000e-09 75.0
24 TraesCS1D01G074800 chr1D 93.878 49 1 2 3 51 56618689 56618643 5.550000e-09 73.1
25 TraesCS1D01G074800 chr1D 95.455 44 2 0 1 44 56612813 56612770 2.000000e-08 71.3
26 TraesCS1D01G074800 chr1D 97.143 35 1 0 48 82 30226632 30226598 4.320000e-05 60.2
27 TraesCS1D01G074800 chr1D 100.000 29 0 0 1775 1803 56429272 56429244 2.000000e-03 54.7
28 TraesCS1D01G074800 chr1A 93.308 1554 78 9 206 1735 54458134 54459685 0.000000e+00 2270.0
29 TraesCS1D01G074800 chr1A 91.257 1464 83 16 308 1735 56336697 56338151 0.000000e+00 1953.0
30 TraesCS1D01G074800 chr1A 91.906 1322 69 12 2243 3563 54460273 54461557 0.000000e+00 1814.0
31 TraesCS1D01G074800 chr1A 90.346 1243 81 9 2243 3485 56370717 56371920 0.000000e+00 1594.0
32 TraesCS1D01G074800 chr1A 92.344 836 48 6 2243 3070 56338770 56339597 0.000000e+00 1175.0
33 TraesCS1D01G074800 chr1A 88.525 854 49 24 206 1011 56367864 56368716 0.000000e+00 989.0
34 TraesCS1D01G074800 chr1A 91.853 491 40 0 1245 1735 56369544 56370034 0.000000e+00 686.0
35 TraesCS1D01G074800 chr1A 91.800 439 26 5 1815 2251 56338268 56338698 1.590000e-168 603.0
36 TraesCS1D01G074800 chr1A 84.040 495 49 9 3069 3563 56340308 56340772 2.190000e-122 449.0
37 TraesCS1D01G074800 chr1A 89.071 366 28 9 1891 2251 54459843 54460201 1.020000e-120 444.0
38 TraesCS1D01G074800 chr1A 96.522 230 8 0 1007 1236 56369273 56369502 8.120000e-102 381.0
39 TraesCS1D01G074800 chr1A 91.983 237 13 4 2018 2251 56370412 56370645 1.070000e-85 327.0
40 TraesCS1D01G074800 chr1A 95.031 161 8 0 1 161 54457967 54458127 1.850000e-63 254.0
41 TraesCS1D01G074800 chr1A 89.091 165 12 4 1 161 56367695 56367857 2.440000e-47 200.0
42 TraesCS1D01G074800 chr1B 94.860 1323 44 8 2243 3563 91880822 91879522 0.000000e+00 2045.0
43 TraesCS1D01G074800 chr1B 93.099 768 40 4 969 1724 91882373 91881607 0.000000e+00 1112.0
44 TraesCS1D01G074800 chr1B 86.476 525 35 14 313 823 91882937 91882435 9.780000e-151 544.0
45 TraesCS1D01G074800 chr1B 85.572 402 41 9 1861 2251 91881289 91880894 4.820000e-109 405.0
46 TraesCS1D01G074800 chr7A 77.095 358 65 15 1310 1660 457867081 457866734 1.470000e-44 191.0
47 TraesCS1D01G074800 chr3D 80.841 214 35 5 1295 1505 120148561 120148351 3.200000e-36 163.0
48 TraesCS1D01G074800 chr3D 96.226 53 1 1 156 207 393654284 393654336 7.130000e-13 86.1
49 TraesCS1D01G074800 chr3D 97.959 49 1 0 159 207 538407040 538407088 7.130000e-13 86.1
50 TraesCS1D01G074800 chr2B 100.000 48 0 0 156 203 771198862 771198815 5.510000e-14 89.8
51 TraesCS1D01G074800 chr2D 96.296 54 1 1 155 207 67565281 67565228 1.980000e-13 87.9
52 TraesCS1D01G074800 chr7D 97.959 49 1 0 159 207 494760452 494760404 7.130000e-13 86.1
53 TraesCS1D01G074800 chr7D 97.917 48 1 0 160 207 631841597 631841550 2.560000e-12 84.2
54 TraesCS1D01G074800 chr7D 94.872 39 1 1 46 83 603161787 603161825 4.320000e-05 60.2
55 TraesCS1D01G074800 chr4B 97.959 49 1 0 159 207 9429278 9429230 7.130000e-13 86.1
56 TraesCS1D01G074800 chr6B 92.727 55 2 2 150 203 176277086 176277033 1.190000e-10 78.7
57 TraesCS1D01G074800 chr5D 79.439 107 18 4 1077 1181 315485503 315485399 5.550000e-09 73.1
58 TraesCS1D01G074800 chr4A 97.222 36 1 0 48 83 584075370 584075405 1.200000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G074800 chr1D 56527823 56531824 4001 True 7391.000000 7391 100.000000 1 4002 1 chr1D.!!$R2 4001
1 TraesCS1D01G074800 chr1D 56427349 56430807 3458 True 1015.675000 1881 92.524250 206 3563 4 chr1D.!!$R8 3357
2 TraesCS1D01G074800 chr1D 56869385 56875904 6519 True 793.600000 1413 90.919800 308 3382 5 chr1D.!!$R11 3074
3 TraesCS1D01G074800 chr1D 56607906 56612901 4995 True 553.912500 1740 92.044625 1 3494 8 chr1D.!!$R9 3493
4 TraesCS1D01G074800 chr1D 56618023 56618689 666 True 243.033333 449 89.811333 3 787 3 chr1D.!!$R10 784
5 TraesCS1D01G074800 chr1A 54457967 54461557 3590 False 1195.500000 2270 92.329000 1 3563 4 chr1A.!!$F1 3562
6 TraesCS1D01G074800 chr1A 56336697 56340772 4075 False 1045.000000 1953 89.860250 308 3563 4 chr1A.!!$F2 3255
7 TraesCS1D01G074800 chr1A 56367695 56371920 4225 False 696.166667 1594 91.386667 1 3485 6 chr1A.!!$F3 3484
8 TraesCS1D01G074800 chr1B 91879522 91882937 3415 True 1026.500000 2045 90.001750 313 3563 4 chr1B.!!$R1 3250

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
190 196 0.331616 AAAAGAAGGATGACCCCCGG 59.668 55.0 0.00 0.0 36.73 5.73 F
1268 3595 0.383590 TGTTTGGTTCGTGCATGGTG 59.616 50.0 5.98 0.0 0.00 4.17 F
2132 4823 0.397941 AGGTTTCTACAGCAGCAGCA 59.602 50.0 3.17 0.0 45.49 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1735 4082 0.250467 ATGCGCACCTGTTTCTCTGT 60.250 50.0 14.90 0.00 0.00 3.41 R
2439 5225 0.603975 GGAAGCTCTCCACGTTGCTT 60.604 55.0 9.31 8.54 46.69 3.91 R
3577 10443 0.034896 AAAGTGCCTCCGTCGAATGT 59.965 50.0 0.00 0.00 0.00 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
117 119 3.162666 TCTTAGACGTCCCTCACATTGT 58.837 45.455 13.01 0.00 0.00 2.71
131 133 7.451255 TCCCTCACATTGTTCATGTTCTAAATT 59.549 33.333 0.00 0.00 44.40 1.82
187 193 6.911250 TTTTTAGAAAAGAAGGATGACCCC 57.089 37.500 0.00 0.00 36.73 4.95
188 194 4.586306 TTAGAAAAGAAGGATGACCCCC 57.414 45.455 0.00 0.00 36.73 5.40
189 195 1.282157 AGAAAAGAAGGATGACCCCCG 59.718 52.381 0.00 0.00 36.73 5.73
190 196 0.331616 AAAAGAAGGATGACCCCCGG 59.668 55.000 0.00 0.00 36.73 5.73
191 197 2.211468 AAAGAAGGATGACCCCCGGC 62.211 60.000 0.00 0.00 36.73 6.13
192 198 4.191015 GAAGGATGACCCCCGGCC 62.191 72.222 0.00 0.00 36.73 6.13
193 199 4.760220 AAGGATGACCCCCGGCCT 62.760 66.667 0.00 0.00 36.73 5.19
196 202 3.866582 GATGACCCCCGGCCTCTG 61.867 72.222 0.00 0.00 0.00 3.35
202 208 4.559063 CCCCGGCCTCTGCATCTG 62.559 72.222 0.00 0.00 40.13 2.90
203 209 3.473647 CCCGGCCTCTGCATCTGA 61.474 66.667 0.00 0.00 40.13 3.27
204 210 2.108566 CCGGCCTCTGCATCTGAG 59.891 66.667 0.00 0.00 40.13 3.35
338 345 6.362248 TGGCTATTGGAGTAGTAAAAATCCC 58.638 40.000 0.00 0.00 0.00 3.85
339 346 6.069323 TGGCTATTGGAGTAGTAAAAATCCCA 60.069 38.462 0.00 0.00 0.00 4.37
340 347 7.004691 GGCTATTGGAGTAGTAAAAATCCCAT 58.995 38.462 0.00 0.00 0.00 4.00
342 349 7.939588 GCTATTGGAGTAGTAAAAATCCCATCT 59.060 37.037 0.00 0.00 0.00 2.90
343 350 9.495572 CTATTGGAGTAGTAAAAATCCCATCTC 57.504 37.037 0.00 0.00 0.00 2.75
344 351 6.884472 TGGAGTAGTAAAAATCCCATCTCA 57.116 37.500 0.00 0.00 0.00 3.27
345 352 7.451731 TGGAGTAGTAAAAATCCCATCTCAT 57.548 36.000 0.00 0.00 0.00 2.90
408 446 2.215942 TCCATCCGTTCTCTCACTCA 57.784 50.000 0.00 0.00 0.00 3.41
456 494 4.275662 CGCAGTGTGACGTTTTTCATTAA 58.724 39.130 0.00 0.00 0.00 1.40
561 2222 5.728471 AGAGATCCATATGCACCGATAAAG 58.272 41.667 0.00 0.00 0.00 1.85
625 2288 4.946478 AGGAAATATCGACCTTCTCCAG 57.054 45.455 0.00 0.00 0.00 3.86
793 2474 2.420628 TGCTTGCATTTCTTTCACCG 57.579 45.000 0.00 0.00 0.00 4.94
838 2523 1.081174 TCCTCTCACCCCATCTCCTTT 59.919 52.381 0.00 0.00 0.00 3.11
923 2627 4.270084 CACATAAGGCAGTGGTACAATACG 59.730 45.833 0.00 0.00 44.16 3.06
1266 3593 0.660005 CGTGTTTGGTTCGTGCATGG 60.660 55.000 5.98 0.00 0.00 3.66
1267 3594 0.383949 GTGTTTGGTTCGTGCATGGT 59.616 50.000 5.98 0.00 0.00 3.55
1268 3595 0.383590 TGTTTGGTTCGTGCATGGTG 59.616 50.000 5.98 0.00 0.00 4.17
1277 3604 1.579964 CGTGCATGGTGCTGACATGT 61.580 55.000 0.00 0.00 45.68 3.21
1289 3616 2.604914 GCTGACATGTTTGATCGATCGT 59.395 45.455 20.03 10.64 0.00 3.73
1350 3677 1.667212 GACAACGTCAAGTTCGGGTTT 59.333 47.619 0.00 0.00 42.02 3.27
1735 4082 1.339610 AGGTGCGCATTTTTACTTGCA 59.660 42.857 15.91 0.00 38.80 4.08
1736 4083 2.835475 GTGCGCATTTTTACTTGCAC 57.165 45.000 15.91 0.00 44.72 4.57
1738 4085 2.392821 TGCGCATTTTTACTTGCACAG 58.607 42.857 5.66 0.00 38.80 3.66
1739 4086 2.033927 TGCGCATTTTTACTTGCACAGA 59.966 40.909 5.66 0.00 38.80 3.41
1740 4087 2.658325 GCGCATTTTTACTTGCACAGAG 59.342 45.455 0.30 0.00 38.80 3.35
1741 4088 3.609175 GCGCATTTTTACTTGCACAGAGA 60.609 43.478 0.30 0.00 38.80 3.10
1743 4090 4.975502 CGCATTTTTACTTGCACAGAGAAA 59.024 37.500 0.00 0.00 38.80 2.52
1744 4091 5.108254 CGCATTTTTACTTGCACAGAGAAAC 60.108 40.000 0.00 0.00 38.80 2.78
1745 4092 5.748152 GCATTTTTACTTGCACAGAGAAACA 59.252 36.000 0.00 0.00 38.72 2.83
1746 4093 6.074676 GCATTTTTACTTGCACAGAGAAACAG 60.075 38.462 0.00 0.00 38.72 3.16
1748 4095 2.717639 ACTTGCACAGAGAAACAGGT 57.282 45.000 0.00 0.00 0.00 4.00
1752 4099 1.571460 CACAGAGAAACAGGTGCGC 59.429 57.895 0.00 0.00 0.00 6.09
1753 4100 1.146041 ACAGAGAAACAGGTGCGCA 59.854 52.632 5.66 5.66 0.00 6.09
1755 4102 0.877071 CAGAGAAACAGGTGCGCATT 59.123 50.000 15.91 2.15 0.00 3.56
1756 4103 1.267806 CAGAGAAACAGGTGCGCATTT 59.732 47.619 15.91 10.36 0.00 2.32
1757 4104 1.956477 AGAGAAACAGGTGCGCATTTT 59.044 42.857 15.91 11.14 0.00 1.82
1758 4105 2.362077 AGAGAAACAGGTGCGCATTTTT 59.638 40.909 15.91 10.76 0.00 1.94
1759 4106 3.568007 AGAGAAACAGGTGCGCATTTTTA 59.432 39.130 15.91 0.00 0.00 1.52
1760 4107 3.638484 AGAAACAGGTGCGCATTTTTAC 58.362 40.909 15.91 0.00 0.00 2.01
1761 4108 3.067461 AGAAACAGGTGCGCATTTTTACA 59.933 39.130 15.91 0.00 0.00 2.41
1768 4115 5.576384 CAGGTGCGCATTTTTACATACATTT 59.424 36.000 15.91 0.00 0.00 2.32
1769 4116 6.090628 CAGGTGCGCATTTTTACATACATTTT 59.909 34.615 15.91 0.00 0.00 1.82
1771 4118 7.815068 AGGTGCGCATTTTTACATACATTTTTA 59.185 29.630 15.91 0.00 0.00 1.52
1773 4120 7.625309 GTGCGCATTTTTACATACATTTTTACG 59.375 33.333 15.91 0.00 0.00 3.18
1805 4152 3.252964 GCACACGTATGCACAGCA 58.747 55.556 15.18 0.00 45.39 4.41
1808 4155 0.585838 CACACGTATGCACAGCACAA 59.414 50.000 0.00 0.00 43.04 3.33
1809 4156 1.003008 CACACGTATGCACAGCACAAA 60.003 47.619 0.00 0.00 43.04 2.83
1810 4157 1.879380 ACACGTATGCACAGCACAAAT 59.121 42.857 0.00 0.00 43.04 2.32
1811 4158 2.293122 ACACGTATGCACAGCACAAATT 59.707 40.909 0.00 0.00 43.04 1.82
1822 4280 3.941483 ACAGCACAAATTAATAGAGCGCT 59.059 39.130 11.27 11.27 0.00 5.92
1893 4543 3.066064 CACAAATTGGACGGTTTCTGTGA 59.934 43.478 0.00 0.00 0.00 3.58
1942 4592 8.040727 GTGAGGGAATTTATTTAGCAAACCATT 58.959 33.333 0.00 0.00 0.00 3.16
1956 4606 4.651994 CAAACCATTTCATAGAGTCGTGC 58.348 43.478 0.00 0.00 0.00 5.34
2042 4729 6.291377 TCAGCTAATTTCTTGAGTCACTTGT 58.709 36.000 0.00 0.00 0.00 3.16
2043 4730 6.767902 TCAGCTAATTTCTTGAGTCACTTGTT 59.232 34.615 0.00 0.00 0.00 2.83
2044 4731 6.854892 CAGCTAATTTCTTGAGTCACTTGTTG 59.145 38.462 0.00 0.00 0.00 3.33
2070 4760 1.597937 GCAGTTGTTTCAGTTCGCCAG 60.598 52.381 0.00 0.00 0.00 4.85
2092 4782 2.367202 CCACCGTGGCCTCTACCAT 61.367 63.158 4.16 0.00 43.01 3.55
2108 4799 3.558931 ACCATAACAGCATTCCATCGA 57.441 42.857 0.00 0.00 0.00 3.59
2114 4805 1.134580 ACAGCATTCCATCGACCAGAG 60.135 52.381 0.00 0.00 0.00 3.35
2125 4816 1.544691 TCGACCAGAGGTTTCTACAGC 59.455 52.381 0.00 0.00 35.25 4.40
2132 4823 0.397941 AGGTTTCTACAGCAGCAGCA 59.602 50.000 3.17 0.00 45.49 4.41
2171 4862 7.870509 AGCACATCACTAATTAATGTCACAT 57.129 32.000 0.00 0.00 31.43 3.21
2172 4863 8.962884 AGCACATCACTAATTAATGTCACATA 57.037 30.769 0.00 0.00 31.43 2.29
2336 5122 7.396907 CAGATGATCCTAGTAGGTCTGATGAAT 59.603 40.741 21.87 5.77 37.09 2.57
2348 5134 3.061831 GTCTGATGAATCGACAGCAACTG 59.938 47.826 0.00 0.00 35.79 3.16
2412 5198 2.437359 CTCCAAGGGAAGCTGCCG 60.437 66.667 4.08 0.00 30.73 5.69
2439 5225 4.193334 CGCCACGCCGAGATGAGA 62.193 66.667 0.00 0.00 0.00 3.27
2553 5339 1.669440 GTCCAACCTGCAGGACGTA 59.331 57.895 39.19 18.11 44.23 3.57
2727 5513 0.618458 TGAGCTACATGGTTGGGGTC 59.382 55.000 0.00 0.00 0.00 4.46
2732 5518 0.325602 TACATGGTTGGGGTCGGAAC 59.674 55.000 0.00 0.00 0.00 3.62
2733 5519 1.378762 CATGGTTGGGGTCGGAACT 59.621 57.895 0.00 0.00 0.00 3.01
2734 5520 0.676782 CATGGTTGGGGTCGGAACTC 60.677 60.000 0.00 0.00 0.00 3.01
2735 5521 2.047560 GGTTGGGGTCGGAACTCG 60.048 66.667 0.00 0.00 40.90 4.18
2736 5522 2.047560 GTTGGGGTCGGAACTCGG 60.048 66.667 0.00 0.00 39.77 4.63
2737 5523 2.203669 TTGGGGTCGGAACTCGGA 60.204 61.111 0.00 0.00 39.77 4.55
2738 5524 1.837947 TTGGGGTCGGAACTCGGAA 60.838 57.895 0.00 0.00 39.77 4.30
2801 5587 2.766698 TCCATCAGGAACAACCCGA 58.233 52.632 0.00 0.00 42.23 5.14
3007 5793 5.688807 AGGCTTCTGCATAACTGATGTTAT 58.311 37.500 0.00 0.00 46.77 1.89
3115 6620 5.570973 CGACAACAACACAGAAATTGTTTCA 59.429 36.000 5.36 0.00 44.61 2.69
3438 10304 3.257561 CGAGCTCGATGCCAACGG 61.258 66.667 32.06 0.00 44.23 4.44
3485 10351 2.039084 GACATGAGGGTTTCCACTCAGT 59.961 50.000 0.00 0.00 45.87 3.41
3488 10354 3.662759 TGAGGGTTTCCACTCAGTTTT 57.337 42.857 0.00 0.00 38.71 2.43
3489 10355 3.976015 TGAGGGTTTCCACTCAGTTTTT 58.024 40.909 0.00 0.00 38.71 1.94
3517 10383 1.090728 GCCTTAGTTTGGAGCAGCTC 58.909 55.000 14.69 14.69 0.00 4.09
3557 10423 3.840666 TCTTGGTCACCTCTGCTAGAAAT 59.159 43.478 0.00 0.00 0.00 2.17
3563 10429 1.488393 ACCTCTGCTAGAAATCCAGGC 59.512 52.381 0.00 0.00 0.00 4.85
3564 10430 1.487976 CCTCTGCTAGAAATCCAGGCA 59.512 52.381 0.00 0.00 0.00 4.75
3567 10433 2.996249 TGCTAGAAATCCAGGCAGAG 57.004 50.000 0.00 0.00 0.00 3.35
3568 10434 1.487976 TGCTAGAAATCCAGGCAGAGG 59.512 52.381 0.00 0.00 0.00 3.69
3569 10435 1.765314 GCTAGAAATCCAGGCAGAGGA 59.235 52.381 0.00 0.00 39.97 3.71
3571 10437 3.806507 GCTAGAAATCCAGGCAGAGGATG 60.807 52.174 6.87 0.00 44.94 3.51
3572 10438 1.493871 AGAAATCCAGGCAGAGGATGG 59.506 52.381 6.87 0.00 44.94 3.51
3573 10439 1.213926 GAAATCCAGGCAGAGGATGGT 59.786 52.381 6.87 0.00 44.94 3.55
3574 10440 0.842635 AATCCAGGCAGAGGATGGTC 59.157 55.000 6.87 0.00 44.94 4.02
3575 10441 1.059006 ATCCAGGCAGAGGATGGTCC 61.059 60.000 5.50 0.00 44.04 4.46
3576 10442 2.750657 CCAGGCAGAGGATGGTCCC 61.751 68.421 0.00 0.00 37.19 4.46
3577 10443 1.997311 CAGGCAGAGGATGGTCCCA 60.997 63.158 0.00 0.00 37.19 4.37
3578 10444 1.997874 AGGCAGAGGATGGTCCCAC 60.998 63.158 0.00 0.00 37.19 4.61
3579 10445 2.300967 GGCAGAGGATGGTCCCACA 61.301 63.158 0.00 0.00 37.19 4.17
3580 10446 1.639635 GGCAGAGGATGGTCCCACAT 61.640 60.000 0.00 0.00 37.19 3.21
3581 10447 0.257039 GCAGAGGATGGTCCCACATT 59.743 55.000 0.00 0.00 37.19 2.71
3582 10448 1.748591 GCAGAGGATGGTCCCACATTC 60.749 57.143 0.00 0.00 37.19 2.67
3583 10449 0.833287 AGAGGATGGTCCCACATTCG 59.167 55.000 0.00 0.00 37.19 3.34
3584 10450 0.830648 GAGGATGGTCCCACATTCGA 59.169 55.000 0.00 0.00 37.19 3.71
3585 10451 0.541863 AGGATGGTCCCACATTCGAC 59.458 55.000 0.00 0.00 37.19 4.20
3586 10452 0.810031 GGATGGTCCCACATTCGACG 60.810 60.000 0.00 0.00 0.00 5.12
3587 10453 0.810031 GATGGTCCCACATTCGACGG 60.810 60.000 0.00 0.00 0.00 4.79
3588 10454 1.261938 ATGGTCCCACATTCGACGGA 61.262 55.000 0.00 0.00 0.00 4.69
3589 10455 1.153628 GGTCCCACATTCGACGGAG 60.154 63.158 0.00 0.00 0.00 4.63
3590 10456 1.153628 GTCCCACATTCGACGGAGG 60.154 63.158 0.00 0.00 0.00 4.30
3591 10457 2.511600 CCCACATTCGACGGAGGC 60.512 66.667 0.00 0.00 0.00 4.70
3592 10458 2.264480 CCACATTCGACGGAGGCA 59.736 61.111 0.00 0.00 0.00 4.75
3593 10459 2.100631 CCACATTCGACGGAGGCAC 61.101 63.158 0.00 0.00 0.00 5.01
3595 10461 0.670546 CACATTCGACGGAGGCACTT 60.671 55.000 0.00 0.00 41.55 3.16
3596 10462 0.034896 ACATTCGACGGAGGCACTTT 59.965 50.000 0.00 0.00 41.55 2.66
3597 10463 1.156736 CATTCGACGGAGGCACTTTT 58.843 50.000 0.00 0.00 41.55 2.27
3598 10464 1.135972 CATTCGACGGAGGCACTTTTG 60.136 52.381 0.00 0.00 41.55 2.44
3599 10465 0.179067 TTCGACGGAGGCACTTTTGT 60.179 50.000 0.00 0.00 41.55 2.83
3608 10474 3.541191 CACTTTTGTGCGCCATGC 58.459 55.556 4.18 0.00 44.07 4.06
3609 10475 1.007038 CACTTTTGTGCGCCATGCT 60.007 52.632 4.18 0.00 46.63 3.79
3610 10476 1.007038 ACTTTTGTGCGCCATGCTG 60.007 52.632 4.18 0.00 46.63 4.41
3611 10477 2.356075 TTTTGTGCGCCATGCTGC 60.356 55.556 4.18 0.00 46.63 5.25
3612 10478 3.148031 TTTTGTGCGCCATGCTGCA 62.148 52.632 4.13 4.13 46.63 4.41
3613 10479 2.437518 TTTTGTGCGCCATGCTGCAT 62.438 50.000 9.81 9.81 46.63 3.96
3614 10480 2.437518 TTTGTGCGCCATGCTGCATT 62.438 50.000 13.38 0.00 46.63 3.56
3615 10481 1.593296 TTGTGCGCCATGCTGCATTA 61.593 50.000 13.38 3.98 46.63 1.90
3616 10482 1.298863 GTGCGCCATGCTGCATTAG 60.299 57.895 13.38 8.69 46.63 1.73
3626 10492 2.485677 CTGCATTAGCCACACCCTG 58.514 57.895 0.00 0.00 41.13 4.45
3627 10493 1.001020 TGCATTAGCCACACCCTGG 60.001 57.895 0.00 0.00 44.08 4.45
3628 10494 1.302949 GCATTAGCCACACCCTGGA 59.697 57.895 0.00 0.00 43.95 3.86
3629 10495 0.323360 GCATTAGCCACACCCTGGAA 60.323 55.000 0.00 0.00 43.95 3.53
3630 10496 1.755179 CATTAGCCACACCCTGGAAG 58.245 55.000 0.00 0.00 43.95 3.46
3631 10497 0.034089 ATTAGCCACACCCTGGAAGC 60.034 55.000 0.00 0.00 43.95 3.86
3632 10498 1.133809 TTAGCCACACCCTGGAAGCT 61.134 55.000 0.00 0.00 43.95 3.74
3633 10499 1.133809 TAGCCACACCCTGGAAGCTT 61.134 55.000 0.00 0.00 43.95 3.74
3634 10500 1.531602 GCCACACCCTGGAAGCTTT 60.532 57.895 0.00 0.00 43.95 3.51
3635 10501 1.527433 GCCACACCCTGGAAGCTTTC 61.527 60.000 0.00 0.00 43.95 2.62
3650 10516 6.149129 GAAGCTTTCCAATTTATACCCCTG 57.851 41.667 0.00 0.00 0.00 4.45
3651 10517 4.546674 AGCTTTCCAATTTATACCCCTGG 58.453 43.478 0.00 0.00 0.00 4.45
3652 10518 3.641436 GCTTTCCAATTTATACCCCTGGG 59.359 47.826 5.50 5.50 42.03 4.45
3663 10529 3.184736 CCCCTGGGTAAATCCGTTG 57.815 57.895 12.71 0.00 37.00 4.10
3664 10530 0.395173 CCCCTGGGTAAATCCGTTGG 60.395 60.000 12.71 0.00 37.00 3.77
3665 10531 0.395173 CCCTGGGTAAATCCGTTGGG 60.395 60.000 3.97 0.00 37.00 4.12
3666 10532 0.395173 CCTGGGTAAATCCGTTGGGG 60.395 60.000 0.00 0.00 37.00 4.96
3667 10533 0.330267 CTGGGTAAATCCGTTGGGGT 59.670 55.000 0.00 0.00 37.00 4.95
3668 10534 1.560611 CTGGGTAAATCCGTTGGGGTA 59.439 52.381 0.00 0.00 37.00 3.69
3669 10535 1.560611 TGGGTAAATCCGTTGGGGTAG 59.439 52.381 0.00 0.00 37.00 3.18
3670 10536 1.561076 GGGTAAATCCGTTGGGGTAGT 59.439 52.381 0.00 0.00 37.00 2.73
3671 10537 2.420547 GGGTAAATCCGTTGGGGTAGTC 60.421 54.545 0.00 0.00 37.00 2.59
3672 10538 2.420547 GGTAAATCCGTTGGGGTAGTCC 60.421 54.545 0.00 0.00 37.00 3.85
3673 10539 0.251073 AAATCCGTTGGGGTAGTCCG 59.749 55.000 0.00 0.00 37.00 4.79
3674 10540 2.248086 AATCCGTTGGGGTAGTCCGC 62.248 60.000 0.00 0.00 45.39 5.54
3675 10541 4.462280 CCGTTGGGGTAGTCCGCC 62.462 72.222 0.00 0.00 44.70 6.13
3683 10549 4.424566 GTAGTCCGCCGCCGTTGA 62.425 66.667 0.00 0.00 0.00 3.18
3684 10550 3.454573 TAGTCCGCCGCCGTTGAT 61.455 61.111 0.00 0.00 0.00 2.57
3685 10551 3.009192 TAGTCCGCCGCCGTTGATT 62.009 57.895 0.00 0.00 0.00 2.57
3686 10552 2.510064 TAGTCCGCCGCCGTTGATTT 62.510 55.000 0.00 0.00 0.00 2.17
3687 10553 2.101835 GTCCGCCGCCGTTGATTTA 61.102 57.895 0.00 0.00 0.00 1.40
3688 10554 1.812093 TCCGCCGCCGTTGATTTAG 60.812 57.895 0.00 0.00 0.00 1.85
3689 10555 2.104253 CCGCCGCCGTTGATTTAGT 61.104 57.895 0.00 0.00 0.00 2.24
3690 10556 1.060308 CGCCGCCGTTGATTTAGTG 59.940 57.895 0.00 0.00 0.00 2.74
3691 10557 1.355796 CGCCGCCGTTGATTTAGTGA 61.356 55.000 0.00 0.00 0.00 3.41
3692 10558 1.014352 GCCGCCGTTGATTTAGTGAT 58.986 50.000 0.00 0.00 0.00 3.06
3693 10559 1.003866 GCCGCCGTTGATTTAGTGATC 60.004 52.381 0.00 0.00 0.00 2.92
3694 10560 1.597663 CCGCCGTTGATTTAGTGATCC 59.402 52.381 0.00 0.00 0.00 3.36
3695 10561 2.276201 CGCCGTTGATTTAGTGATCCA 58.724 47.619 0.00 0.00 0.00 3.41
3696 10562 2.675844 CGCCGTTGATTTAGTGATCCAA 59.324 45.455 0.00 0.00 0.00 3.53
3697 10563 3.485216 CGCCGTTGATTTAGTGATCCAAC 60.485 47.826 0.00 0.00 0.00 3.77
3698 10564 3.485216 GCCGTTGATTTAGTGATCCAACG 60.485 47.826 18.34 18.34 38.61 4.10
3699 10565 3.063452 CCGTTGATTTAGTGATCCAACGG 59.937 47.826 25.26 25.26 44.29 4.44
3700 10566 3.682858 CGTTGATTTAGTGATCCAACGGT 59.317 43.478 17.82 0.00 37.16 4.83
3701 10567 4.435518 CGTTGATTTAGTGATCCAACGGTG 60.436 45.833 17.82 0.00 37.16 4.94
3702 10568 3.006940 TGATTTAGTGATCCAACGGTGC 58.993 45.455 0.00 0.00 0.00 5.01
3703 10569 1.816074 TTTAGTGATCCAACGGTGCC 58.184 50.000 0.00 0.00 0.00 5.01
3704 10570 0.981183 TTAGTGATCCAACGGTGCCT 59.019 50.000 0.00 0.00 0.00 4.75
3705 10571 0.249120 TAGTGATCCAACGGTGCCTG 59.751 55.000 0.00 0.00 0.00 4.85
3706 10572 2.040544 GTGATCCAACGGTGCCTGG 61.041 63.158 0.00 0.00 0.00 4.45
3707 10573 2.438434 GATCCAACGGTGCCTGGG 60.438 66.667 0.00 0.00 33.19 4.45
3708 10574 2.933287 ATCCAACGGTGCCTGGGA 60.933 61.111 0.00 0.00 33.19 4.37
3709 10575 2.478335 GATCCAACGGTGCCTGGGAA 62.478 60.000 0.00 0.00 33.19 3.97
3710 10576 1.863155 ATCCAACGGTGCCTGGGAAT 61.863 55.000 0.00 0.00 33.19 3.01
3711 10577 1.606313 CCAACGGTGCCTGGGAATT 60.606 57.895 0.00 0.00 0.00 2.17
3712 10578 1.595093 CCAACGGTGCCTGGGAATTC 61.595 60.000 0.00 0.00 0.00 2.17
3713 10579 1.304134 AACGGTGCCTGGGAATTCC 60.304 57.895 16.74 16.74 0.00 3.01
3714 10580 2.075355 AACGGTGCCTGGGAATTCCA 62.075 55.000 25.67 11.08 44.79 3.53
3715 10581 2.046285 CGGTGCCTGGGAATTCCAC 61.046 63.158 25.67 14.27 41.46 4.02
3716 10582 2.046285 GGTGCCTGGGAATTCCACG 61.046 63.158 25.67 14.92 41.46 4.94
3717 10583 1.002624 GTGCCTGGGAATTCCACGA 60.003 57.895 25.67 8.23 41.46 4.35
3718 10584 0.394352 GTGCCTGGGAATTCCACGAT 60.394 55.000 25.67 0.00 41.46 3.73
3719 10585 1.134220 GTGCCTGGGAATTCCACGATA 60.134 52.381 25.67 6.37 41.46 2.92
3720 10586 1.134220 TGCCTGGGAATTCCACGATAC 60.134 52.381 25.67 7.95 41.46 2.24
3721 10587 1.134220 GCCTGGGAATTCCACGATACA 60.134 52.381 25.67 12.10 41.46 2.29
3722 10588 2.682563 GCCTGGGAATTCCACGATACAA 60.683 50.000 25.67 0.34 41.46 2.41
3723 10589 3.616219 CCTGGGAATTCCACGATACAAA 58.384 45.455 25.67 0.00 41.46 2.83
3724 10590 3.627577 CCTGGGAATTCCACGATACAAAG 59.372 47.826 25.67 8.20 41.46 2.77
3725 10591 3.616219 TGGGAATTCCACGATACAAAGG 58.384 45.455 25.67 0.00 41.46 3.11
3726 10592 3.009695 TGGGAATTCCACGATACAAAGGT 59.990 43.478 25.67 0.00 41.46 3.50
3727 10593 3.377172 GGGAATTCCACGATACAAAGGTG 59.623 47.826 25.67 0.00 37.91 4.00
3731 10597 1.734163 CCACGATACAAAGGTGGGAC 58.266 55.000 1.55 0.00 45.84 4.46
3732 10598 1.002659 CCACGATACAAAGGTGGGACA 59.997 52.381 1.55 0.00 45.84 4.02
3733 10599 2.346803 CACGATACAAAGGTGGGACAG 58.653 52.381 0.00 0.00 41.80 3.51
3734 10600 2.028476 CACGATACAAAGGTGGGACAGA 60.028 50.000 0.00 0.00 41.80 3.41
3735 10601 2.838202 ACGATACAAAGGTGGGACAGAT 59.162 45.455 0.00 0.00 41.80 2.90
3736 10602 3.198068 CGATACAAAGGTGGGACAGATG 58.802 50.000 0.00 0.00 41.80 2.90
3737 10603 2.489938 TACAAAGGTGGGACAGATGC 57.510 50.000 0.00 0.00 41.80 3.91
3738 10604 0.251341 ACAAAGGTGGGACAGATGCC 60.251 55.000 0.00 0.00 41.80 4.40
3739 10605 1.002134 AAAGGTGGGACAGATGCCG 60.002 57.895 0.00 0.00 41.80 5.69
3740 10606 1.488705 AAAGGTGGGACAGATGCCGA 61.489 55.000 0.00 0.00 41.80 5.54
3741 10607 2.125106 GGTGGGACAGATGCCGAC 60.125 66.667 0.00 0.00 41.80 4.79
3742 10608 2.509336 GTGGGACAGATGCCGACG 60.509 66.667 0.00 0.00 41.80 5.12
3743 10609 2.994995 TGGGACAGATGCCGACGT 60.995 61.111 0.00 0.00 39.83 4.34
3744 10610 2.202756 GGGACAGATGCCGACGTC 60.203 66.667 5.18 5.18 0.00 4.34
3745 10611 2.711922 GGGACAGATGCCGACGTCT 61.712 63.158 14.70 0.00 43.17 4.18
3749 10615 3.461773 AGATGCCGACGTCTGGGG 61.462 66.667 22.10 14.24 40.76 4.96
3755 10621 4.367023 CGACGTCTGGGGCGGAAA 62.367 66.667 14.70 0.00 0.00 3.13
3756 10622 2.267961 GACGTCTGGGGCGGAAAT 59.732 61.111 8.70 0.00 0.00 2.17
3757 10623 1.814169 GACGTCTGGGGCGGAAATC 60.814 63.158 8.70 0.00 0.00 2.17
3758 10624 2.890474 CGTCTGGGGCGGAAATCG 60.890 66.667 0.00 0.00 42.76 3.34
3759 10625 2.582436 GTCTGGGGCGGAAATCGA 59.418 61.111 0.00 0.00 42.43 3.59
3760 10626 1.521681 GTCTGGGGCGGAAATCGAG 60.522 63.158 0.00 0.00 42.43 4.04
3761 10627 2.203070 CTGGGGCGGAAATCGAGG 60.203 66.667 0.00 0.00 42.43 4.63
3762 10628 4.483243 TGGGGCGGAAATCGAGGC 62.483 66.667 0.00 0.00 42.43 4.70
3767 10633 3.564027 CGGAAATCGAGGCGCCAC 61.564 66.667 31.54 23.03 42.43 5.01
3768 10634 3.564027 GGAAATCGAGGCGCCACG 61.564 66.667 35.97 35.97 0.00 4.94
3769 10635 3.564027 GAAATCGAGGCGCCACGG 61.564 66.667 38.99 23.83 0.00 4.94
3785 10651 3.672503 GGCCCACCTCCCCATGTT 61.673 66.667 0.00 0.00 0.00 2.71
3786 10652 2.043953 GCCCACCTCCCCATGTTC 60.044 66.667 0.00 0.00 0.00 3.18
3787 10653 2.272146 CCCACCTCCCCATGTTCG 59.728 66.667 0.00 0.00 0.00 3.95
3788 10654 2.438434 CCACCTCCCCATGTTCGC 60.438 66.667 0.00 0.00 0.00 4.70
3789 10655 2.819595 CACCTCCCCATGTTCGCG 60.820 66.667 0.00 0.00 0.00 5.87
3790 10656 4.096003 ACCTCCCCATGTTCGCGG 62.096 66.667 6.13 0.00 0.00 6.46
3791 10657 4.096003 CCTCCCCATGTTCGCGGT 62.096 66.667 6.13 0.00 0.00 5.68
3792 10658 2.819595 CTCCCCATGTTCGCGGTG 60.820 66.667 6.13 0.13 0.00 4.94
3793 10659 3.309436 CTCCCCATGTTCGCGGTGA 62.309 63.158 6.13 0.00 0.00 4.02
3794 10660 2.124736 CCCCATGTTCGCGGTGAT 60.125 61.111 6.13 0.00 0.00 3.06
3795 10661 1.748879 CCCCATGTTCGCGGTGATT 60.749 57.895 6.13 0.00 0.00 2.57
3796 10662 1.312371 CCCCATGTTCGCGGTGATTT 61.312 55.000 6.13 0.00 0.00 2.17
3797 10663 0.098728 CCCATGTTCGCGGTGATTTC 59.901 55.000 6.13 0.00 0.00 2.17
3798 10664 0.247655 CCATGTTCGCGGTGATTTCG 60.248 55.000 6.13 0.00 0.00 3.46
3799 10665 0.442310 CATGTTCGCGGTGATTTCGT 59.558 50.000 6.13 0.00 0.00 3.85
3800 10666 1.656594 CATGTTCGCGGTGATTTCGTA 59.343 47.619 6.13 0.00 0.00 3.43
3801 10667 1.342555 TGTTCGCGGTGATTTCGTAG 58.657 50.000 6.13 0.00 0.00 3.51
3802 10668 1.068402 TGTTCGCGGTGATTTCGTAGA 60.068 47.619 6.13 0.00 0.00 2.59
3803 10669 1.582502 GTTCGCGGTGATTTCGTAGAG 59.417 52.381 6.13 0.00 38.43 2.43
3804 10670 1.089112 TCGCGGTGATTTCGTAGAGA 58.911 50.000 6.13 0.00 38.43 3.10
3805 10671 1.189403 CGCGGTGATTTCGTAGAGAC 58.811 55.000 0.00 0.00 38.43 3.36
3815 10681 4.806481 GTAGAGACGTGCGCGCGA 62.806 66.667 45.30 23.45 42.83 5.87
3816 10682 4.092652 TAGAGACGTGCGCGCGAA 62.093 61.111 45.30 24.32 42.83 4.70
3817 10683 3.598228 TAGAGACGTGCGCGCGAAA 62.598 57.895 45.30 23.48 42.83 3.46
3818 10684 2.860690 TAGAGACGTGCGCGCGAAAT 62.861 55.000 45.30 30.15 42.83 2.17
3819 10685 3.348967 GAGACGTGCGCGCGAAATT 62.349 57.895 45.30 26.40 42.83 1.82
3820 10686 2.498887 GACGTGCGCGCGAAATTT 60.499 55.556 45.30 26.00 42.83 1.82
3821 10687 2.051703 ACGTGCGCGCGAAATTTT 60.052 50.000 45.30 22.67 42.83 1.82
3822 10688 0.786439 GACGTGCGCGCGAAATTTTA 60.786 50.000 45.30 2.27 42.83 1.52
3823 10689 0.787908 ACGTGCGCGCGAAATTTTAG 60.788 50.000 45.30 17.17 42.83 1.85
3824 10690 0.517539 CGTGCGCGCGAAATTTTAGA 60.518 50.000 37.95 0.47 0.00 2.10
3825 10691 1.810197 GTGCGCGCGAAATTTTAGAT 58.190 45.000 37.18 0.00 0.00 1.98
3826 10692 1.508725 GTGCGCGCGAAATTTTAGATG 59.491 47.619 37.18 0.00 0.00 2.90
3827 10693 1.129624 TGCGCGCGAAATTTTAGATGT 59.870 42.857 37.18 0.00 0.00 3.06
3828 10694 1.508725 GCGCGCGAAATTTTAGATGTG 59.491 47.619 37.18 0.00 0.00 3.21
3829 10695 1.508725 CGCGCGAAATTTTAGATGTGC 59.491 47.619 28.94 0.00 0.00 4.57
3830 10696 2.514902 GCGCGAAATTTTAGATGTGCA 58.485 42.857 12.10 0.00 33.36 4.57
3831 10697 2.914214 GCGCGAAATTTTAGATGTGCAA 59.086 40.909 12.10 0.00 33.36 4.08
3832 10698 3.363426 GCGCGAAATTTTAGATGTGCAAA 59.637 39.130 12.10 0.00 33.36 3.68
3833 10699 4.031652 GCGCGAAATTTTAGATGTGCAAAT 59.968 37.500 12.10 0.00 33.36 2.32
3834 10700 5.444481 GCGCGAAATTTTAGATGTGCAAATT 60.444 36.000 12.10 0.00 32.62 1.82
3835 10701 6.524490 CGCGAAATTTTAGATGTGCAAATTT 58.476 32.000 0.00 3.32 40.93 1.82
3836 10702 7.008859 CGCGAAATTTTAGATGTGCAAATTTT 58.991 30.769 0.00 0.00 39.23 1.82
3837 10703 7.005505 CGCGAAATTTTAGATGTGCAAATTTTG 59.994 33.333 0.00 4.72 39.23 2.44
3838 10704 7.798052 GCGAAATTTTAGATGTGCAAATTTTGT 59.202 29.630 10.65 0.00 40.44 2.83
3839 10705 9.649024 CGAAATTTTAGATGTGCAAATTTTGTT 57.351 25.926 10.65 0.00 39.23 2.83
3848 10714 9.491675 AGATGTGCAAATTTTGTTGATTATCAA 57.508 25.926 3.20 3.20 33.32 2.57
3851 10717 8.719648 TGTGCAAATTTTGTTGATTATCAATCC 58.280 29.630 11.01 0.02 38.79 3.01
3852 10718 7.899330 GTGCAAATTTTGTTGATTATCAATCCG 59.101 33.333 11.01 0.00 38.79 4.18
3853 10719 7.601886 TGCAAATTTTGTTGATTATCAATCCGT 59.398 29.630 11.01 0.00 38.79 4.69
3854 10720 8.442384 GCAAATTTTGTTGATTATCAATCCGTT 58.558 29.630 11.01 1.32 38.79 4.44
3855 10721 9.743937 CAAATTTTGTTGATTATCAATCCGTTG 57.256 29.630 11.01 7.51 38.79 4.10
3880 10746 8.721019 GATCCAATGATCAGAGATATCTTTCC 57.279 38.462 6.70 0.00 45.63 3.13
3881 10747 6.695429 TCCAATGATCAGAGATATCTTTCCG 58.305 40.000 6.70 0.00 0.00 4.30
3882 10748 6.494835 TCCAATGATCAGAGATATCTTTCCGA 59.505 38.462 6.70 2.08 0.00 4.55
3883 10749 7.015584 TCCAATGATCAGAGATATCTTTCCGAA 59.984 37.037 6.70 0.00 0.00 4.30
3884 10750 7.331440 CCAATGATCAGAGATATCTTTCCGAAG 59.669 40.741 6.70 0.00 0.00 3.79
3885 10751 7.773489 ATGATCAGAGATATCTTTCCGAAGA 57.227 36.000 6.70 0.00 45.45 2.87
3896 10762 5.434352 TCTTTCCGAAGATACATACTCCG 57.566 43.478 0.00 0.00 36.99 4.63
3897 10763 4.885907 TCTTTCCGAAGATACATACTCCGT 59.114 41.667 0.00 0.00 36.99 4.69
3898 10764 4.825546 TTCCGAAGATACATACTCCGTC 57.174 45.455 0.00 0.00 0.00 4.79
3899 10765 3.144506 TCCGAAGATACATACTCCGTCC 58.855 50.000 0.00 0.00 0.00 4.79
3900 10766 2.095869 CCGAAGATACATACTCCGTCCG 60.096 54.545 0.00 0.00 0.00 4.79
3901 10767 2.804527 CGAAGATACATACTCCGTCCGA 59.195 50.000 0.00 0.00 0.00 4.55
3902 10768 3.363772 CGAAGATACATACTCCGTCCGAC 60.364 52.174 0.00 0.00 0.00 4.79
3903 10769 2.141517 AGATACATACTCCGTCCGACG 58.858 52.381 14.15 14.15 42.11 5.12
3904 10770 2.138320 GATACATACTCCGTCCGACGA 58.862 52.381 22.40 7.59 46.05 4.20
3905 10771 2.022764 TACATACTCCGTCCGACGAA 57.977 50.000 22.40 0.00 46.05 3.85
3906 10772 0.731417 ACATACTCCGTCCGACGAAG 59.269 55.000 22.40 14.39 46.05 3.79
3907 10773 1.012086 CATACTCCGTCCGACGAAGA 58.988 55.000 22.40 10.69 46.05 2.87
3908 10774 1.602851 CATACTCCGTCCGACGAAGAT 59.397 52.381 22.40 4.59 46.05 2.40
3909 10775 1.742761 TACTCCGTCCGACGAAGATT 58.257 50.000 22.40 8.58 46.05 2.40
3910 10776 0.450983 ACTCCGTCCGACGAAGATTC 59.549 55.000 22.40 0.00 46.05 2.52
3911 10777 0.733729 CTCCGTCCGACGAAGATTCT 59.266 55.000 22.40 0.00 46.05 2.40
3912 10778 0.450583 TCCGTCCGACGAAGATTCTG 59.549 55.000 22.40 3.00 46.05 3.02
3913 10779 0.170561 CCGTCCGACGAAGATTCTGT 59.829 55.000 22.40 0.00 46.05 3.41
3914 10780 1.399440 CCGTCCGACGAAGATTCTGTA 59.601 52.381 22.40 0.00 46.05 2.74
3915 10781 2.159476 CCGTCCGACGAAGATTCTGTAA 60.159 50.000 22.40 0.00 46.05 2.41
3916 10782 3.495193 CGTCCGACGAAGATTCTGTAAA 58.505 45.455 16.03 0.00 46.05 2.01
3917 10783 3.916172 CGTCCGACGAAGATTCTGTAAAA 59.084 43.478 16.03 0.00 46.05 1.52
3918 10784 4.201466 CGTCCGACGAAGATTCTGTAAAAC 60.201 45.833 16.03 0.00 46.05 2.43
3919 10785 4.682860 GTCCGACGAAGATTCTGTAAAACA 59.317 41.667 0.00 0.00 0.00 2.83
3920 10786 5.347907 GTCCGACGAAGATTCTGTAAAACAT 59.652 40.000 0.00 0.00 0.00 2.71
3921 10787 5.575606 TCCGACGAAGATTCTGTAAAACATC 59.424 40.000 0.00 0.00 0.00 3.06
3922 10788 5.472822 CGACGAAGATTCTGTAAAACATCG 58.527 41.667 0.00 0.00 0.00 3.84
3923 10789 5.285370 CGACGAAGATTCTGTAAAACATCGA 59.715 40.000 7.03 0.00 0.00 3.59
3924 10790 6.390987 ACGAAGATTCTGTAAAACATCGAC 57.609 37.500 7.03 0.00 0.00 4.20
3925 10791 5.060569 ACGAAGATTCTGTAAAACATCGACG 59.939 40.000 7.03 0.00 0.00 5.12
3926 10792 5.060569 CGAAGATTCTGTAAAACATCGACGT 59.939 40.000 0.00 0.00 0.00 4.34
3927 10793 6.390987 AAGATTCTGTAAAACATCGACGTC 57.609 37.500 5.18 5.18 0.00 4.34
3928 10794 4.863131 AGATTCTGTAAAACATCGACGTCC 59.137 41.667 10.58 0.00 0.00 4.79
3929 10795 3.646611 TCTGTAAAACATCGACGTCCA 57.353 42.857 10.58 0.00 0.00 4.02
3930 10796 3.311106 TCTGTAAAACATCGACGTCCAC 58.689 45.455 10.58 0.00 0.00 4.02
3931 10797 3.005050 TCTGTAAAACATCGACGTCCACT 59.995 43.478 10.58 0.00 0.00 4.00
3932 10798 4.216042 TCTGTAAAACATCGACGTCCACTA 59.784 41.667 10.58 0.00 0.00 2.74
3933 10799 4.478699 TGTAAAACATCGACGTCCACTAG 58.521 43.478 10.58 0.00 0.00 2.57
3934 10800 2.649331 AAACATCGACGTCCACTAGG 57.351 50.000 10.58 0.00 0.00 3.02
3935 10801 1.830279 AACATCGACGTCCACTAGGA 58.170 50.000 10.58 0.00 43.21 2.94
3945 10811 2.532250 TCCACTAGGACAGATGCTCA 57.468 50.000 0.00 0.00 39.61 4.26
3946 10812 2.820178 TCCACTAGGACAGATGCTCAA 58.180 47.619 0.00 0.00 39.61 3.02
3947 10813 3.173151 TCCACTAGGACAGATGCTCAAA 58.827 45.455 0.00 0.00 39.61 2.69
3948 10814 3.582647 TCCACTAGGACAGATGCTCAAAA 59.417 43.478 0.00 0.00 39.61 2.44
3949 10815 4.225942 TCCACTAGGACAGATGCTCAAAAT 59.774 41.667 0.00 0.00 39.61 1.82
3950 10816 4.946157 CCACTAGGACAGATGCTCAAAATT 59.054 41.667 0.00 0.00 36.89 1.82
3951 10817 5.416952 CCACTAGGACAGATGCTCAAAATTT 59.583 40.000 0.00 0.00 36.89 1.82
3952 10818 6.071728 CCACTAGGACAGATGCTCAAAATTTT 60.072 38.462 0.00 0.00 36.89 1.82
3953 10819 6.805271 CACTAGGACAGATGCTCAAAATTTTG 59.195 38.462 22.40 22.40 39.48 2.44
3954 10820 4.563061 AGGACAGATGCTCAAAATTTTGC 58.437 39.130 23.36 14.70 38.05 3.68
3955 10821 3.681417 GGACAGATGCTCAAAATTTTGCC 59.319 43.478 23.36 16.99 38.05 4.52
3956 10822 4.562143 GGACAGATGCTCAAAATTTTGCCT 60.562 41.667 23.36 12.71 38.05 4.75
3957 10823 5.336690 GGACAGATGCTCAAAATTTTGCCTA 60.337 40.000 23.36 12.95 38.05 3.93
3958 10824 6.100404 ACAGATGCTCAAAATTTTGCCTAA 57.900 33.333 23.36 10.86 38.05 2.69
3959 10825 6.523840 ACAGATGCTCAAAATTTTGCCTAAA 58.476 32.000 23.36 7.44 38.05 1.85
3960 10826 6.647895 ACAGATGCTCAAAATTTTGCCTAAAG 59.352 34.615 23.36 16.44 38.05 1.85
3961 10827 6.647895 CAGATGCTCAAAATTTTGCCTAAAGT 59.352 34.615 23.36 7.59 38.05 2.66
3962 10828 6.870439 AGATGCTCAAAATTTTGCCTAAAGTC 59.130 34.615 23.36 14.40 38.05 3.01
3963 10829 5.911752 TGCTCAAAATTTTGCCTAAAGTCA 58.088 33.333 23.36 14.37 38.05 3.41
3964 10830 6.523840 TGCTCAAAATTTTGCCTAAAGTCAT 58.476 32.000 23.36 0.00 38.05 3.06
3965 10831 6.646240 TGCTCAAAATTTTGCCTAAAGTCATC 59.354 34.615 23.36 5.77 38.05 2.92
3966 10832 6.870439 GCTCAAAATTTTGCCTAAAGTCATCT 59.130 34.615 23.36 0.00 38.05 2.90
3967 10833 7.386025 GCTCAAAATTTTGCCTAAAGTCATCTT 59.614 33.333 23.36 0.00 38.05 2.40
3968 10834 8.816640 TCAAAATTTTGCCTAAAGTCATCTTC 57.183 30.769 23.36 0.00 38.05 2.87
3969 10835 8.420222 TCAAAATTTTGCCTAAAGTCATCTTCA 58.580 29.630 23.36 0.20 38.05 3.02
3970 10836 8.706035 CAAAATTTTGCCTAAAGTCATCTTCAG 58.294 33.333 17.48 0.00 32.90 3.02
3971 10837 5.964958 TTTTGCCTAAAGTCATCTTCAGG 57.035 39.130 0.00 0.00 41.01 3.86
3972 10838 4.908601 TTGCCTAAAGTCATCTTCAGGA 57.091 40.909 1.73 0.00 40.63 3.86
3973 10839 5.441718 TTGCCTAAAGTCATCTTCAGGAT 57.558 39.130 1.73 0.00 40.63 3.24
3974 10840 5.441718 TGCCTAAAGTCATCTTCAGGATT 57.558 39.130 1.73 0.00 40.63 3.01
3975 10841 5.188434 TGCCTAAAGTCATCTTCAGGATTG 58.812 41.667 1.73 0.00 40.63 2.67
3976 10842 4.036144 GCCTAAAGTCATCTTCAGGATTGC 59.964 45.833 1.73 0.00 40.63 3.56
3977 10843 5.435291 CCTAAAGTCATCTTCAGGATTGCT 58.565 41.667 0.00 0.00 40.63 3.91
3978 10844 6.586344 CCTAAAGTCATCTTCAGGATTGCTA 58.414 40.000 0.00 0.00 40.63 3.49
3979 10845 7.222872 CCTAAAGTCATCTTCAGGATTGCTAT 58.777 38.462 0.00 0.00 40.63 2.97
3980 10846 8.370940 CCTAAAGTCATCTTCAGGATTGCTATA 58.629 37.037 0.00 0.00 40.63 1.31
3981 10847 9.421806 CTAAAGTCATCTTCAGGATTGCTATAG 57.578 37.037 0.00 0.00 32.90 1.31
3982 10848 6.357579 AGTCATCTTCAGGATTGCTATAGG 57.642 41.667 1.04 0.00 31.27 2.57
3983 10849 6.080682 AGTCATCTTCAGGATTGCTATAGGA 58.919 40.000 1.04 0.00 31.27 2.94
3984 10850 6.730038 AGTCATCTTCAGGATTGCTATAGGAT 59.270 38.462 1.04 0.00 31.27 3.24
3985 10851 6.817641 GTCATCTTCAGGATTGCTATAGGATG 59.182 42.308 1.04 2.48 31.27 3.51
3986 10852 5.752036 TCTTCAGGATTGCTATAGGATGG 57.248 43.478 1.04 0.00 0.00 3.51
3987 10853 4.533707 TCTTCAGGATTGCTATAGGATGGG 59.466 45.833 1.04 0.00 0.00 4.00
3988 10854 4.146245 TCAGGATTGCTATAGGATGGGA 57.854 45.455 1.04 0.00 0.00 4.37
3989 10855 4.703299 TCAGGATTGCTATAGGATGGGAT 58.297 43.478 1.04 0.00 0.00 3.85
3990 10856 4.718774 TCAGGATTGCTATAGGATGGGATC 59.281 45.833 1.04 0.00 0.00 3.36
3991 10857 3.708631 AGGATTGCTATAGGATGGGATCG 59.291 47.826 1.04 0.00 0.00 3.69
3992 10858 3.706594 GGATTGCTATAGGATGGGATCGA 59.293 47.826 1.04 0.00 0.00 3.59
3993 10859 4.442192 GGATTGCTATAGGATGGGATCGAC 60.442 50.000 1.04 0.00 0.00 4.20
3994 10860 2.092323 TGCTATAGGATGGGATCGACG 58.908 52.381 1.04 0.00 0.00 5.12
3995 10861 1.202313 GCTATAGGATGGGATCGACGC 60.202 57.143 1.04 0.00 0.00 5.19
3996 10862 2.370349 CTATAGGATGGGATCGACGCT 58.630 52.381 0.00 0.00 0.00 5.07
3997 10863 1.178276 ATAGGATGGGATCGACGCTC 58.822 55.000 0.00 0.00 0.00 5.03
3998 10864 0.894184 TAGGATGGGATCGACGCTCC 60.894 60.000 9.26 9.26 32.97 4.70
3999 10865 2.203771 GGATGGGATCGACGCTCCT 61.204 63.158 16.69 0.00 33.05 3.69
4000 10866 1.287503 GATGGGATCGACGCTCCTC 59.712 63.158 16.69 8.18 33.05 3.71
4001 10867 2.148558 GATGGGATCGACGCTCCTCC 62.149 65.000 16.69 7.25 33.05 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 0.179045 GCAATGTGAGGGCCGTCTAT 60.179 55.000 24.96 16.37 0.00 1.98
131 133 6.529220 AGCAACCAATACAATTAAAAAGCCA 58.471 32.000 0.00 0.00 0.00 4.75
164 170 5.778241 GGGGGTCATCCTTCTTTTCTAAAAA 59.222 40.000 0.00 0.00 35.33 1.94
165 171 5.330233 GGGGGTCATCCTTCTTTTCTAAAA 58.670 41.667 0.00 0.00 35.33 1.52
166 172 4.566907 CGGGGGTCATCCTTCTTTTCTAAA 60.567 45.833 0.00 0.00 35.33 1.85
167 173 3.054655 CGGGGGTCATCCTTCTTTTCTAA 60.055 47.826 0.00 0.00 35.33 2.10
168 174 2.504175 CGGGGGTCATCCTTCTTTTCTA 59.496 50.000 0.00 0.00 35.33 2.10
169 175 1.282157 CGGGGGTCATCCTTCTTTTCT 59.718 52.381 0.00 0.00 35.33 2.52
170 176 1.682087 CCGGGGGTCATCCTTCTTTTC 60.682 57.143 0.00 0.00 35.33 2.29
171 177 0.331616 CCGGGGGTCATCCTTCTTTT 59.668 55.000 0.00 0.00 35.33 2.27
172 178 1.999346 CCGGGGGTCATCCTTCTTT 59.001 57.895 0.00 0.00 35.33 2.52
173 179 2.680370 GCCGGGGGTCATCCTTCTT 61.680 63.158 2.18 0.00 35.33 2.52
174 180 3.090532 GCCGGGGGTCATCCTTCT 61.091 66.667 2.18 0.00 35.33 2.85
175 181 4.191015 GGCCGGGGGTCATCCTTC 62.191 72.222 2.18 0.00 35.33 3.46
176 182 4.760220 AGGCCGGGGGTCATCCTT 62.760 66.667 2.18 0.00 35.33 3.36
179 185 3.866582 CAGAGGCCGGGGGTCATC 61.867 72.222 2.18 0.00 0.00 2.92
185 191 4.559063 CAGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
186 192 3.457625 CTCAGATGCAGAGGCCGGG 62.458 68.421 2.18 0.00 40.13 5.73
187 193 2.108566 CTCAGATGCAGAGGCCGG 59.891 66.667 0.00 0.00 40.13 6.13
188 194 1.067749 CTCTCAGATGCAGAGGCCG 59.932 63.158 0.00 0.00 40.13 6.13
189 195 1.227615 GCTCTCAGATGCAGAGGCC 60.228 63.158 0.00 0.00 38.31 5.19
190 196 0.178533 AAGCTCTCAGATGCAGAGGC 59.821 55.000 0.00 0.00 38.31 4.70
191 197 2.036217 CCTAAGCTCTCAGATGCAGAGG 59.964 54.545 0.00 1.95 38.31 3.69
192 198 2.694628 ACCTAAGCTCTCAGATGCAGAG 59.305 50.000 0.00 0.00 40.50 3.35
193 199 2.429971 CACCTAAGCTCTCAGATGCAGA 59.570 50.000 0.00 0.00 0.00 4.26
194 200 2.168106 ACACCTAAGCTCTCAGATGCAG 59.832 50.000 0.00 0.00 0.00 4.41
195 201 2.182827 ACACCTAAGCTCTCAGATGCA 58.817 47.619 0.00 0.00 0.00 3.96
196 202 2.977772 ACACCTAAGCTCTCAGATGC 57.022 50.000 0.00 0.00 0.00 3.91
197 203 6.040278 TGAGATAACACCTAAGCTCTCAGATG 59.960 42.308 0.00 0.00 35.46 2.90
198 204 6.132658 TGAGATAACACCTAAGCTCTCAGAT 58.867 40.000 0.00 0.00 35.46 2.90
199 205 5.510430 TGAGATAACACCTAAGCTCTCAGA 58.490 41.667 0.00 0.00 35.46 3.27
200 206 5.843673 TGAGATAACACCTAAGCTCTCAG 57.156 43.478 0.00 0.00 35.46 3.35
201 207 5.069648 CCATGAGATAACACCTAAGCTCTCA 59.930 44.000 0.00 2.87 42.17 3.27
202 208 5.303078 TCCATGAGATAACACCTAAGCTCTC 59.697 44.000 0.00 0.00 0.00 3.20
203 209 5.211973 TCCATGAGATAACACCTAAGCTCT 58.788 41.667 0.00 0.00 0.00 4.09
204 210 5.537300 TCCATGAGATAACACCTAAGCTC 57.463 43.478 0.00 0.00 0.00 4.09
335 342 4.776435 TCTTGCACAATATGAGATGGGA 57.224 40.909 0.00 0.00 0.00 4.37
338 345 5.752892 AGCTTCTTGCACAATATGAGATG 57.247 39.130 0.00 0.00 45.94 2.90
339 346 7.772292 TCTTTAGCTTCTTGCACAATATGAGAT 59.228 33.333 0.00 0.00 45.94 2.75
340 347 7.105588 TCTTTAGCTTCTTGCACAATATGAGA 58.894 34.615 0.00 0.00 45.94 3.27
342 349 6.183360 GCTCTTTAGCTTCTTGCACAATATGA 60.183 38.462 0.00 0.00 45.85 2.15
343 350 5.970023 GCTCTTTAGCTTCTTGCACAATATG 59.030 40.000 0.00 0.00 45.85 1.78
344 351 6.129053 GCTCTTTAGCTTCTTGCACAATAT 57.871 37.500 0.00 0.00 45.85 1.28
345 352 5.551760 GCTCTTTAGCTTCTTGCACAATA 57.448 39.130 0.00 0.00 45.85 1.90
408 446 3.258372 TGCCTACGTGAGTTGATCTTCTT 59.742 43.478 0.00 0.00 46.40 2.52
456 494 6.931838 TCGAAGAGTTAACATACAAGATGGT 58.068 36.000 8.61 0.00 0.00 3.55
532 2172 4.210331 GGTGCATATGGATCTCTTTTGGT 58.790 43.478 4.56 0.00 0.00 3.67
625 2288 6.617879 ACTTATTTGGCGGAATTAACTTCAC 58.382 36.000 0.00 0.00 35.41 3.18
793 2474 7.396540 ACAAGGTTTCAATCCACTATGAATC 57.603 36.000 0.00 0.00 35.63 2.52
838 2523 3.553508 GGGACGTATTTATAGGCGCAAGA 60.554 47.826 10.83 0.00 43.02 3.02
923 2627 5.963594 AGTTTCTTGTTAGGTCCTATCGTC 58.036 41.667 0.00 0.00 0.00 4.20
1266 3593 3.542875 CGATCGATCAAACATGTCAGCAC 60.543 47.826 24.40 0.00 0.00 4.40
1267 3594 2.604462 CGATCGATCAAACATGTCAGCA 59.396 45.455 24.40 0.00 0.00 4.41
1268 3595 2.604914 ACGATCGATCAAACATGTCAGC 59.395 45.455 24.34 0.00 0.00 4.26
1277 3604 1.731709 CCTGCACAACGATCGATCAAA 59.268 47.619 24.34 1.59 0.00 2.69
1289 3616 0.320683 CGTGAGATCCACCTGCACAA 60.321 55.000 8.25 0.00 42.76 3.33
1551 3886 2.509336 GGCGTGTCCATGTCCTCG 60.509 66.667 0.00 0.00 34.01 4.63
1735 4082 0.250467 ATGCGCACCTGTTTCTCTGT 60.250 50.000 14.90 0.00 0.00 3.41
1736 4083 0.877071 AATGCGCACCTGTTTCTCTG 59.123 50.000 14.90 0.00 0.00 3.35
1738 4085 2.422276 AAAATGCGCACCTGTTTCTC 57.578 45.000 14.90 0.00 0.00 2.87
1739 4086 2.888834 AAAAATGCGCACCTGTTTCT 57.111 40.000 14.90 0.00 0.00 2.52
1740 4087 3.376540 TGTAAAAATGCGCACCTGTTTC 58.623 40.909 14.90 2.92 0.00 2.78
1741 4088 3.444703 TGTAAAAATGCGCACCTGTTT 57.555 38.095 14.90 8.49 0.00 2.83
1743 4090 3.504134 TGTATGTAAAAATGCGCACCTGT 59.496 39.130 14.90 0.00 0.00 4.00
1744 4091 4.090138 TGTATGTAAAAATGCGCACCTG 57.910 40.909 14.90 0.00 0.00 4.00
1745 4092 4.981806 ATGTATGTAAAAATGCGCACCT 57.018 36.364 14.90 0.00 0.00 4.00
1746 4093 6.401955 AAAATGTATGTAAAAATGCGCACC 57.598 33.333 14.90 0.00 0.00 5.01
1748 4095 7.326305 ACGTAAAAATGTATGTAAAAATGCGCA 59.674 29.630 14.96 14.96 0.00 6.09
1750 4097 8.631695 ACACGTAAAAATGTATGTAAAAATGCG 58.368 29.630 0.00 0.00 0.00 4.73
1759 4106 9.575783 AAACTCAAAACACGTAAAAATGTATGT 57.424 25.926 0.00 0.00 0.00 2.29
1768 4115 4.621886 GTGCCAAAACTCAAAACACGTAAA 59.378 37.500 0.00 0.00 0.00 2.01
1769 4116 4.167268 GTGCCAAAACTCAAAACACGTAA 58.833 39.130 0.00 0.00 0.00 3.18
1771 4118 2.029828 TGTGCCAAAACTCAAAACACGT 60.030 40.909 0.00 0.00 0.00 4.49
1773 4120 2.344142 CGTGTGCCAAAACTCAAAACAC 59.656 45.455 0.00 0.00 34.52 3.32
1803 4150 3.038710 GCAGCGCTCTATTAATTTGTGC 58.961 45.455 7.13 0.00 34.78 4.57
1804 4151 4.031028 GTGCAGCGCTCTATTAATTTGTG 58.969 43.478 7.13 0.00 0.00 3.33
1805 4152 3.689161 TGTGCAGCGCTCTATTAATTTGT 59.311 39.130 7.13 0.00 0.00 2.83
1808 4155 3.879295 ACATGTGCAGCGCTCTATTAATT 59.121 39.130 7.13 0.00 0.00 1.40
1809 4156 3.470709 ACATGTGCAGCGCTCTATTAAT 58.529 40.909 7.13 0.00 0.00 1.40
1810 4157 2.905075 ACATGTGCAGCGCTCTATTAA 58.095 42.857 7.13 0.00 0.00 1.40
1811 4158 2.602257 ACATGTGCAGCGCTCTATTA 57.398 45.000 7.13 0.00 0.00 0.98
1822 4280 4.348863 AAAGGGCAAATTAACATGTGCA 57.651 36.364 0.00 0.00 44.72 4.57
1915 4565 6.033966 GGTTTGCTAAATAAATTCCCTCACG 58.966 40.000 0.00 0.00 0.00 4.35
1931 4581 5.580691 CACGACTCTATGAAATGGTTTGCTA 59.419 40.000 0.00 0.00 0.00 3.49
1942 4592 6.072452 CCACTATATGAGCACGACTCTATGAA 60.072 42.308 10.68 0.00 46.41 2.57
1948 4598 2.294791 AGCCACTATATGAGCACGACTC 59.705 50.000 0.00 0.00 46.45 3.36
1951 4601 4.929819 TTTAGCCACTATATGAGCACGA 57.070 40.909 0.00 0.00 0.00 4.35
1956 4606 8.627208 ACATCCATTTTTAGCCACTATATGAG 57.373 34.615 0.00 0.00 0.00 2.90
2044 4731 3.366719 GAACTGAAACAACTGCAGAAGC 58.633 45.455 23.35 3.87 42.57 3.86
2070 4760 2.288025 TAGAGGCCACGGTGGTTCC 61.288 63.158 26.86 20.15 40.46 3.62
2092 4782 2.499693 TCTGGTCGATGGAATGCTGTTA 59.500 45.455 0.00 0.00 0.00 2.41
2108 4799 1.002544 GCTGCTGTAGAAACCTCTGGT 59.997 52.381 0.00 0.00 37.65 4.00
2114 4805 0.801251 CTGCTGCTGCTGTAGAAACC 59.199 55.000 17.28 0.00 40.48 3.27
2125 4816 3.342370 TACCTCGTCGCTGCTGCTG 62.342 63.158 14.03 0.77 36.97 4.41
2132 4823 1.677966 TGCTTCCTACCTCGTCGCT 60.678 57.895 0.00 0.00 0.00 4.93
2336 5122 2.223947 TGAAGCTAACAGTTGCTGTCGA 60.224 45.455 9.99 0.00 44.62 4.20
2348 5134 9.453325 GTATAGTCATCAGTTACTGAAGCTAAC 57.547 37.037 19.42 9.13 44.04 2.34
2439 5225 0.603975 GGAAGCTCTCCACGTTGCTT 60.604 55.000 9.31 8.54 46.69 3.91
2553 5339 2.049802 ACGAACATCGCCGTCGTT 60.050 55.556 0.00 0.00 45.12 3.85
2727 5513 1.135170 GGTACCTCTTTCCGAGTTCCG 60.135 57.143 4.06 0.00 38.11 4.30
2776 5562 1.296715 GTTCCTGATGGACGGCAGT 59.703 57.895 0.00 0.00 43.06 4.40
2890 5676 0.774098 CGTAGTGGTCGTTGTTGTCG 59.226 55.000 0.00 0.00 0.00 4.35
3007 5793 4.639755 TGCACATCTCTTGACTGAAAACAA 59.360 37.500 0.00 0.00 0.00 2.83
3115 6620 7.095695 TGAAGTCTTTTTCGAAGTTTGGATT 57.904 32.000 0.00 0.00 0.00 3.01
3362 10228 1.405105 GCTGGTGTCTTTTTGCTGACA 59.595 47.619 0.00 0.00 40.39 3.58
3491 10357 3.884091 TGCTCCAAACTAAGGCGTAAAAA 59.116 39.130 0.00 0.00 0.00 1.94
3492 10358 3.478509 TGCTCCAAACTAAGGCGTAAAA 58.521 40.909 0.00 0.00 0.00 1.52
3493 10359 3.071479 CTGCTCCAAACTAAGGCGTAAA 58.929 45.455 0.00 0.00 0.00 2.01
3494 10360 2.695359 CTGCTCCAAACTAAGGCGTAA 58.305 47.619 0.00 0.00 0.00 3.18
3495 10361 1.674817 GCTGCTCCAAACTAAGGCGTA 60.675 52.381 0.00 0.00 0.00 4.42
3496 10362 0.955919 GCTGCTCCAAACTAAGGCGT 60.956 55.000 0.00 0.00 0.00 5.68
3497 10363 0.674895 AGCTGCTCCAAACTAAGGCG 60.675 55.000 0.00 0.00 0.00 5.52
3498 10364 1.090728 GAGCTGCTCCAAACTAAGGC 58.909 55.000 18.80 0.00 0.00 4.35
3517 10383 7.394359 TGACCAAGAAAGGAGAATATTTCAAGG 59.606 37.037 0.00 0.00 37.78 3.61
3557 10423 1.690633 GGACCATCCTCTGCCTGGA 60.691 63.158 0.00 0.00 38.06 3.86
3563 10429 1.473965 CGAATGTGGGACCATCCTCTG 60.474 57.143 0.00 0.00 36.57 3.35
3564 10430 0.833287 CGAATGTGGGACCATCCTCT 59.167 55.000 0.00 0.00 36.57 3.69
3565 10431 0.830648 TCGAATGTGGGACCATCCTC 59.169 55.000 0.00 0.00 36.57 3.71
3566 10432 0.541863 GTCGAATGTGGGACCATCCT 59.458 55.000 0.00 0.00 36.57 3.24
3567 10433 0.810031 CGTCGAATGTGGGACCATCC 60.810 60.000 0.00 0.00 35.23 3.51
3568 10434 0.810031 CCGTCGAATGTGGGACCATC 60.810 60.000 0.00 0.00 0.00 3.51
3569 10435 1.220749 CCGTCGAATGTGGGACCAT 59.779 57.895 0.00 0.00 0.00 3.55
3570 10436 1.884075 CTCCGTCGAATGTGGGACCA 61.884 60.000 0.00 0.00 0.00 4.02
3571 10437 1.153628 CTCCGTCGAATGTGGGACC 60.154 63.158 0.00 0.00 0.00 4.46
3572 10438 1.153628 CCTCCGTCGAATGTGGGAC 60.154 63.158 0.00 0.00 0.00 4.46
3573 10439 3.014085 GCCTCCGTCGAATGTGGGA 62.014 63.158 0.00 0.00 0.00 4.37
3574 10440 2.511600 GCCTCCGTCGAATGTGGG 60.512 66.667 0.00 0.00 0.00 4.61
3575 10441 2.100631 GTGCCTCCGTCGAATGTGG 61.101 63.158 0.00 0.00 0.00 4.17
3576 10442 0.670546 AAGTGCCTCCGTCGAATGTG 60.671 55.000 0.00 0.00 0.00 3.21
3577 10443 0.034896 AAAGTGCCTCCGTCGAATGT 59.965 50.000 0.00 0.00 0.00 2.71
3578 10444 1.135972 CAAAAGTGCCTCCGTCGAATG 60.136 52.381 0.00 0.00 0.00 2.67
3579 10445 1.156736 CAAAAGTGCCTCCGTCGAAT 58.843 50.000 0.00 0.00 0.00 3.34
3580 10446 0.179067 ACAAAAGTGCCTCCGTCGAA 60.179 50.000 0.00 0.00 0.00 3.71
3581 10447 0.878523 CACAAAAGTGCCTCCGTCGA 60.879 55.000 0.00 0.00 0.00 4.20
3582 10448 1.569493 CACAAAAGTGCCTCCGTCG 59.431 57.895 0.00 0.00 0.00 5.12
3583 10449 1.282875 GCACAAAAGTGCCTCCGTC 59.717 57.895 9.32 0.00 43.99 4.79
3584 10450 2.542907 CGCACAAAAGTGCCTCCGT 61.543 57.895 14.22 0.00 46.77 4.69
3585 10451 2.252260 CGCACAAAAGTGCCTCCG 59.748 61.111 14.22 0.00 46.77 4.63
3586 10452 2.050077 GCGCACAAAAGTGCCTCC 60.050 61.111 14.22 0.79 46.77 4.30
3590 10456 2.660612 GCATGGCGCACAAAAGTGC 61.661 57.895 10.83 10.37 46.06 4.40
3591 10457 1.007038 AGCATGGCGCACAAAAGTG 60.007 52.632 10.83 1.34 46.13 3.16
3592 10458 1.007038 CAGCATGGCGCACAAAAGT 60.007 52.632 10.83 0.00 46.13 2.66
3593 10459 2.377310 GCAGCATGGCGCACAAAAG 61.377 57.895 10.83 1.19 46.13 2.27
3594 10460 2.356075 GCAGCATGGCGCACAAAA 60.356 55.556 10.83 0.00 46.13 2.44
3595 10461 2.437518 AATGCAGCATGGCGCACAAA 62.438 50.000 9.18 0.00 46.13 2.83
3596 10462 1.593296 TAATGCAGCATGGCGCACAA 61.593 50.000 9.18 0.00 46.13 3.33
3597 10463 1.995646 CTAATGCAGCATGGCGCACA 61.996 55.000 9.18 5.20 46.13 4.57
3598 10464 1.298863 CTAATGCAGCATGGCGCAC 60.299 57.895 9.18 0.00 46.13 5.34
3599 10465 3.112842 CTAATGCAGCATGGCGCA 58.887 55.556 9.18 9.38 46.13 6.09
3608 10474 1.033746 CCAGGGTGTGGCTAATGCAG 61.034 60.000 0.00 0.00 40.39 4.41
3609 10475 1.001020 CCAGGGTGTGGCTAATGCA 60.001 57.895 0.00 0.00 40.39 3.96
3610 10476 3.924507 CCAGGGTGTGGCTAATGC 58.075 61.111 0.00 0.00 40.39 3.56
3627 10493 5.069119 CCAGGGGTATAAATTGGAAAGCTTC 59.931 44.000 0.00 0.00 0.00 3.86
3628 10494 4.962362 CCAGGGGTATAAATTGGAAAGCTT 59.038 41.667 0.00 0.00 0.00 3.74
3629 10495 4.546674 CCAGGGGTATAAATTGGAAAGCT 58.453 43.478 0.00 0.00 0.00 3.74
3630 10496 3.641436 CCCAGGGGTATAAATTGGAAAGC 59.359 47.826 0.00 0.00 0.00 3.51
3645 10511 0.395173 CCAACGGATTTACCCAGGGG 60.395 60.000 11.37 6.87 42.03 4.79
3646 10512 0.395173 CCCAACGGATTTACCCAGGG 60.395 60.000 2.85 2.85 35.30 4.45
3647 10513 0.395173 CCCCAACGGATTTACCCAGG 60.395 60.000 0.00 0.00 34.64 4.45
3648 10514 0.330267 ACCCCAACGGATTTACCCAG 59.670 55.000 0.00 0.00 34.64 4.45
3649 10515 1.560611 CTACCCCAACGGATTTACCCA 59.439 52.381 0.00 0.00 34.64 4.51
3650 10516 1.561076 ACTACCCCAACGGATTTACCC 59.439 52.381 0.00 0.00 34.64 3.69
3651 10517 2.420547 GGACTACCCCAACGGATTTACC 60.421 54.545 0.00 0.00 34.64 2.85
3652 10518 2.739609 CGGACTACCCCAACGGATTTAC 60.740 54.545 0.00 0.00 34.64 2.01
3653 10519 1.481772 CGGACTACCCCAACGGATTTA 59.518 52.381 0.00 0.00 34.64 1.40
3654 10520 0.251073 CGGACTACCCCAACGGATTT 59.749 55.000 0.00 0.00 34.64 2.17
3655 10521 1.902556 CGGACTACCCCAACGGATT 59.097 57.895 0.00 0.00 34.64 3.01
3656 10522 2.728435 GCGGACTACCCCAACGGAT 61.728 63.158 0.00 0.00 34.64 4.18
3657 10523 3.384532 GCGGACTACCCCAACGGA 61.385 66.667 0.00 0.00 34.64 4.69
3658 10524 4.462280 GGCGGACTACCCCAACGG 62.462 72.222 0.00 0.00 37.81 4.44
3659 10525 4.807039 CGGCGGACTACCCCAACG 62.807 72.222 0.00 0.00 0.00 4.10
3666 10532 3.711541 ATCAACGGCGGCGGACTAC 62.712 63.158 35.05 0.00 0.00 2.73
3667 10533 2.510064 AAATCAACGGCGGCGGACTA 62.510 55.000 35.05 17.58 0.00 2.59
3668 10534 2.510064 TAAATCAACGGCGGCGGACT 62.510 55.000 35.05 16.49 0.00 3.85
3669 10535 2.032185 CTAAATCAACGGCGGCGGAC 62.032 60.000 35.05 0.00 0.00 4.79
3670 10536 1.812093 CTAAATCAACGGCGGCGGA 60.812 57.895 35.05 23.43 0.00 5.54
3671 10537 2.104253 ACTAAATCAACGGCGGCGG 61.104 57.895 35.05 18.65 0.00 6.13
3672 10538 1.060308 CACTAAATCAACGGCGGCG 59.940 57.895 31.06 31.06 0.00 6.46
3673 10539 1.003866 GATCACTAAATCAACGGCGGC 60.004 52.381 13.24 0.00 0.00 6.53
3674 10540 1.597663 GGATCACTAAATCAACGGCGG 59.402 52.381 13.24 0.00 0.00 6.13
3675 10541 2.276201 TGGATCACTAAATCAACGGCG 58.724 47.619 4.80 4.80 0.00 6.46
3676 10542 3.485216 CGTTGGATCACTAAATCAACGGC 60.485 47.826 17.82 0.00 37.00 5.68
3677 10543 3.063452 CCGTTGGATCACTAAATCAACGG 59.937 47.826 25.26 25.26 44.23 4.44
3678 10544 3.682858 ACCGTTGGATCACTAAATCAACG 59.317 43.478 18.34 18.34 38.46 4.10
3679 10545 4.671766 GCACCGTTGGATCACTAAATCAAC 60.672 45.833 0.00 0.00 0.00 3.18
3680 10546 3.438781 GCACCGTTGGATCACTAAATCAA 59.561 43.478 0.00 0.00 0.00 2.57
3681 10547 3.006940 GCACCGTTGGATCACTAAATCA 58.993 45.455 0.00 0.00 0.00 2.57
3682 10548 2.354821 GGCACCGTTGGATCACTAAATC 59.645 50.000 0.00 0.00 0.00 2.17
3683 10549 2.026262 AGGCACCGTTGGATCACTAAAT 60.026 45.455 0.00 0.00 0.00 1.40
3684 10550 1.349688 AGGCACCGTTGGATCACTAAA 59.650 47.619 0.00 0.00 0.00 1.85
3685 10551 0.981183 AGGCACCGTTGGATCACTAA 59.019 50.000 0.00 0.00 0.00 2.24
3686 10552 0.249120 CAGGCACCGTTGGATCACTA 59.751 55.000 0.00 0.00 0.00 2.74
3687 10553 1.003355 CAGGCACCGTTGGATCACT 60.003 57.895 0.00 0.00 0.00 3.41
3688 10554 2.040544 CCAGGCACCGTTGGATCAC 61.041 63.158 0.00 0.00 36.55 3.06
3689 10555 2.350895 CCAGGCACCGTTGGATCA 59.649 61.111 0.00 0.00 36.55 2.92
3690 10556 2.438434 CCCAGGCACCGTTGGATC 60.438 66.667 0.00 0.00 36.55 3.36
3691 10557 1.863155 ATTCCCAGGCACCGTTGGAT 61.863 55.000 0.00 0.00 36.55 3.41
3692 10558 2.075355 AATTCCCAGGCACCGTTGGA 62.075 55.000 0.00 0.00 36.55 3.53
3693 10559 1.595093 GAATTCCCAGGCACCGTTGG 61.595 60.000 0.00 0.00 0.00 3.77
3694 10560 1.595093 GGAATTCCCAGGCACCGTTG 61.595 60.000 14.03 0.00 34.14 4.10
3695 10561 1.304134 GGAATTCCCAGGCACCGTT 60.304 57.895 14.03 0.00 34.14 4.44
3696 10562 2.355115 GGAATTCCCAGGCACCGT 59.645 61.111 14.03 0.00 34.14 4.83
3697 10563 2.354729 TGGAATTCCCAGGCACCG 59.645 61.111 21.90 0.00 40.82 4.94
3704 10570 3.009695 ACCTTTGTATCGTGGAATTCCCA 59.990 43.478 21.90 8.33 44.25 4.37
3705 10571 3.377172 CACCTTTGTATCGTGGAATTCCC 59.623 47.826 21.90 11.88 34.29 3.97
3706 10572 4.616181 CACCTTTGTATCGTGGAATTCC 57.384 45.455 18.17 18.17 0.00 3.01
3712 10578 1.002659 TGTCCCACCTTTGTATCGTGG 59.997 52.381 0.00 0.00 45.53 4.94
3713 10579 2.028476 TCTGTCCCACCTTTGTATCGTG 60.028 50.000 0.00 0.00 0.00 4.35
3714 10580 2.253610 TCTGTCCCACCTTTGTATCGT 58.746 47.619 0.00 0.00 0.00 3.73
3715 10581 3.198068 CATCTGTCCCACCTTTGTATCG 58.802 50.000 0.00 0.00 0.00 2.92
3716 10582 2.945668 GCATCTGTCCCACCTTTGTATC 59.054 50.000 0.00 0.00 0.00 2.24
3717 10583 2.357154 GGCATCTGTCCCACCTTTGTAT 60.357 50.000 0.00 0.00 0.00 2.29
3718 10584 1.004277 GGCATCTGTCCCACCTTTGTA 59.996 52.381 0.00 0.00 0.00 2.41
3719 10585 0.251341 GGCATCTGTCCCACCTTTGT 60.251 55.000 0.00 0.00 0.00 2.83
3720 10586 1.308069 CGGCATCTGTCCCACCTTTG 61.308 60.000 0.00 0.00 0.00 2.77
3721 10587 1.002134 CGGCATCTGTCCCACCTTT 60.002 57.895 0.00 0.00 0.00 3.11
3722 10588 1.918293 TCGGCATCTGTCCCACCTT 60.918 57.895 0.00 0.00 0.00 3.50
3723 10589 2.284625 TCGGCATCTGTCCCACCT 60.285 61.111 0.00 0.00 0.00 4.00
3724 10590 2.125106 GTCGGCATCTGTCCCACC 60.125 66.667 0.00 0.00 0.00 4.61
3725 10591 2.509336 CGTCGGCATCTGTCCCAC 60.509 66.667 0.00 0.00 0.00 4.61
3726 10592 2.994995 ACGTCGGCATCTGTCCCA 60.995 61.111 0.00 0.00 0.00 4.37
3727 10593 2.202756 GACGTCGGCATCTGTCCC 60.203 66.667 0.00 0.00 0.00 4.46
3728 10594 1.517257 CAGACGTCGGCATCTGTCC 60.517 63.158 4.65 0.00 38.03 4.02
3729 10595 1.517257 CCAGACGTCGGCATCTGTC 60.517 63.158 12.58 0.00 40.70 3.51
3730 10596 2.573869 CCAGACGTCGGCATCTGT 59.426 61.111 12.58 0.00 40.70 3.41
3731 10597 2.202797 CCCAGACGTCGGCATCTG 60.203 66.667 6.03 6.03 41.75 2.90
3732 10598 3.461773 CCCCAGACGTCGGCATCT 61.462 66.667 17.52 0.00 0.00 2.90
3738 10604 3.659089 ATTTCCGCCCCAGACGTCG 62.659 63.158 10.46 5.16 0.00 5.12
3739 10605 1.814169 GATTTCCGCCCCAGACGTC 60.814 63.158 7.70 7.70 0.00 4.34
3740 10606 2.267961 GATTTCCGCCCCAGACGT 59.732 61.111 0.00 0.00 0.00 4.34
3741 10607 2.890474 CGATTTCCGCCCCAGACG 60.890 66.667 0.00 0.00 0.00 4.18
3742 10608 1.521681 CTCGATTTCCGCCCCAGAC 60.522 63.158 0.00 0.00 38.37 3.51
3743 10609 2.731571 CCTCGATTTCCGCCCCAGA 61.732 63.158 0.00 0.00 38.37 3.86
3744 10610 2.203070 CCTCGATTTCCGCCCCAG 60.203 66.667 0.00 0.00 38.37 4.45
3745 10611 4.483243 GCCTCGATTTCCGCCCCA 62.483 66.667 0.00 0.00 38.37 4.96
3750 10616 3.564027 GTGGCGCCTCGATTTCCG 61.564 66.667 29.70 0.00 40.25 4.30
3751 10617 3.564027 CGTGGCGCCTCGATTTCC 61.564 66.667 39.70 11.59 35.30 3.13
3752 10618 3.564027 CCGTGGCGCCTCGATTTC 61.564 66.667 42.76 17.42 35.30 2.17
3768 10634 3.662117 GAACATGGGGAGGTGGGCC 62.662 68.421 0.00 0.00 0.00 5.80
3769 10635 2.043953 GAACATGGGGAGGTGGGC 60.044 66.667 0.00 0.00 0.00 5.36
3770 10636 2.272146 CGAACATGGGGAGGTGGG 59.728 66.667 0.00 0.00 0.00 4.61
3771 10637 2.438434 GCGAACATGGGGAGGTGG 60.438 66.667 0.00 0.00 0.00 4.61
3772 10638 2.819595 CGCGAACATGGGGAGGTG 60.820 66.667 0.00 0.00 0.00 4.00
3773 10639 4.096003 CCGCGAACATGGGGAGGT 62.096 66.667 8.23 0.00 44.30 3.85
3774 10640 4.096003 ACCGCGAACATGGGGAGG 62.096 66.667 8.23 0.00 44.30 4.30
3775 10641 2.593468 ATCACCGCGAACATGGGGAG 62.593 60.000 8.23 0.00 41.96 4.30
3776 10642 2.191786 AATCACCGCGAACATGGGGA 62.192 55.000 8.23 0.00 44.30 4.81
3777 10643 1.312371 AAATCACCGCGAACATGGGG 61.312 55.000 8.23 0.00 46.74 4.96
3778 10644 0.098728 GAAATCACCGCGAACATGGG 59.901 55.000 8.23 0.00 0.00 4.00
3779 10645 0.247655 CGAAATCACCGCGAACATGG 60.248 55.000 8.23 0.00 0.00 3.66
3780 10646 0.442310 ACGAAATCACCGCGAACATG 59.558 50.000 8.23 0.00 0.00 3.21
3781 10647 1.924524 CTACGAAATCACCGCGAACAT 59.075 47.619 8.23 0.00 0.00 2.71
3782 10648 1.068402 TCTACGAAATCACCGCGAACA 60.068 47.619 8.23 0.00 0.00 3.18
3783 10649 1.582502 CTCTACGAAATCACCGCGAAC 59.417 52.381 8.23 0.00 0.00 3.95
3784 10650 1.469703 TCTCTACGAAATCACCGCGAA 59.530 47.619 8.23 0.00 0.00 4.70
3785 10651 1.089112 TCTCTACGAAATCACCGCGA 58.911 50.000 8.23 0.00 0.00 5.87
3786 10652 1.189403 GTCTCTACGAAATCACCGCG 58.811 55.000 0.00 0.00 0.00 6.46
3798 10664 4.806481 TCGCGCGCACGTCTCTAC 62.806 66.667 32.61 0.00 42.83 2.59
3799 10665 2.860690 ATTTCGCGCGCACGTCTCTA 62.861 55.000 32.61 0.15 42.83 2.43
3800 10666 4.994201 TTTCGCGCGCACGTCTCT 62.994 61.111 32.61 0.00 42.83 3.10
3801 10667 2.811893 AAATTTCGCGCGCACGTCTC 62.812 55.000 32.61 0.00 42.83 3.36
3802 10668 2.438385 AAAATTTCGCGCGCACGTCT 62.438 50.000 32.61 9.20 42.83 4.18
3803 10669 0.786439 TAAAATTTCGCGCGCACGTC 60.786 50.000 32.61 0.27 42.83 4.34
3804 10670 0.787908 CTAAAATTTCGCGCGCACGT 60.788 50.000 32.61 10.85 42.83 4.49
3805 10671 0.517539 TCTAAAATTTCGCGCGCACG 60.518 50.000 32.61 16.35 44.07 5.34
3806 10672 1.508725 CATCTAAAATTTCGCGCGCAC 59.491 47.619 32.61 2.05 0.00 5.34
3807 10673 1.129624 ACATCTAAAATTTCGCGCGCA 59.870 42.857 32.61 13.12 0.00 6.09
3808 10674 1.508725 CACATCTAAAATTTCGCGCGC 59.491 47.619 27.95 23.91 0.00 6.86
3809 10675 1.508725 GCACATCTAAAATTTCGCGCG 59.491 47.619 26.76 26.76 0.00 6.86
3810 10676 2.514902 TGCACATCTAAAATTTCGCGC 58.485 42.857 0.00 0.00 0.00 6.86
3811 10677 5.685195 ATTTGCACATCTAAAATTTCGCG 57.315 34.783 0.00 0.00 0.00 5.87
3812 10678 7.798052 ACAAAATTTGCACATCTAAAATTTCGC 59.202 29.630 5.52 0.00 40.69 4.70
3813 10679 9.649024 AACAAAATTTGCACATCTAAAATTTCG 57.351 25.926 5.52 0.00 40.69 3.46
3822 10688 9.491675 TTGATAATCAACAAAATTTGCACATCT 57.508 25.926 5.52 0.00 30.26 2.90
3825 10691 8.719648 GGATTGATAATCAACAAAATTTGCACA 58.280 29.630 5.52 0.00 39.45 4.57
3826 10692 7.899330 CGGATTGATAATCAACAAAATTTGCAC 59.101 33.333 5.52 0.00 39.45 4.57
3827 10693 7.601886 ACGGATTGATAATCAACAAAATTTGCA 59.398 29.630 5.52 0.00 39.45 4.08
3828 10694 7.962917 ACGGATTGATAATCAACAAAATTTGC 58.037 30.769 5.52 0.00 39.45 3.68
3829 10695 9.743937 CAACGGATTGATAATCAACAAAATTTG 57.256 29.630 3.89 3.89 39.45 2.32
3830 10696 9.703892 TCAACGGATTGATAATCAACAAAATTT 57.296 25.926 0.00 0.00 39.45 1.82
3856 10722 7.179872 TCGGAAAGATATCTCTGATCATTGGAT 59.820 37.037 5.51 3.36 36.13 3.41
3857 10723 6.494835 TCGGAAAGATATCTCTGATCATTGGA 59.505 38.462 5.51 0.00 0.00 3.53
3858 10724 6.695429 TCGGAAAGATATCTCTGATCATTGG 58.305 40.000 5.51 0.00 0.00 3.16
3859 10725 8.087136 TCTTCGGAAAGATATCTCTGATCATTG 58.913 37.037 5.51 0.00 36.59 2.82
3860 10726 8.187913 TCTTCGGAAAGATATCTCTGATCATT 57.812 34.615 5.51 0.00 36.59 2.57
3861 10727 7.773489 TCTTCGGAAAGATATCTCTGATCAT 57.227 36.000 5.51 0.00 36.59 2.45
3871 10737 7.393796 ACGGAGTATGTATCTTCGGAAAGATAT 59.606 37.037 10.21 1.40 46.61 1.63
3872 10738 6.713903 ACGGAGTATGTATCTTCGGAAAGATA 59.286 38.462 4.22 4.22 44.86 1.98
3873 10739 5.535406 ACGGAGTATGTATCTTCGGAAAGAT 59.465 40.000 6.00 6.00 46.93 2.40
3874 10740 4.885907 ACGGAGTATGTATCTTCGGAAAGA 59.114 41.667 0.00 0.00 42.67 2.52
3875 10741 5.184340 ACGGAGTATGTATCTTCGGAAAG 57.816 43.478 0.00 0.00 41.94 2.62
3883 10749 7.694809 TCTTCGTCGGACGGAGTATGTATCT 62.695 48.000 31.62 0.00 46.88 1.98
3884 10750 5.559576 TCTTCGTCGGACGGAGTATGTATC 61.560 50.000 31.62 0.00 46.88 2.24
3885 10751 3.742327 TCTTCGTCGGACGGAGTATGTAT 60.742 47.826 31.62 0.00 46.88 2.29
3886 10752 2.418609 TCTTCGTCGGACGGAGTATGTA 60.419 50.000 31.62 14.54 46.88 2.29
3887 10753 1.676916 TCTTCGTCGGACGGAGTATGT 60.677 52.381 31.62 0.00 46.88 2.29
3888 10754 1.012086 TCTTCGTCGGACGGAGTATG 58.988 55.000 31.62 13.09 46.88 2.39
3889 10755 1.964552 ATCTTCGTCGGACGGAGTAT 58.035 50.000 31.62 22.20 46.88 2.12
3890 10756 1.667724 GAATCTTCGTCGGACGGAGTA 59.332 52.381 31.62 21.17 46.88 2.59
3891 10757 0.450983 GAATCTTCGTCGGACGGAGT 59.549 55.000 31.62 20.61 46.88 3.85
3893 10759 0.450583 CAGAATCTTCGTCGGACGGA 59.549 55.000 28.07 20.53 42.81 4.69
3894 10760 0.170561 ACAGAATCTTCGTCGGACGG 59.829 55.000 28.07 14.64 42.81 4.79
3895 10761 2.819422 TACAGAATCTTCGTCGGACG 57.181 50.000 23.73 23.73 44.19 4.79
3896 10762 4.682860 TGTTTTACAGAATCTTCGTCGGAC 59.317 41.667 0.00 0.00 0.00 4.79
3897 10763 4.873817 TGTTTTACAGAATCTTCGTCGGA 58.126 39.130 0.00 0.00 0.00 4.55
3898 10764 5.498700 CGATGTTTTACAGAATCTTCGTCGG 60.499 44.000 0.00 0.00 32.08 4.79
3899 10765 5.285370 TCGATGTTTTACAGAATCTTCGTCG 59.715 40.000 0.00 0.00 35.39 5.12
3900 10766 6.459330 GTCGATGTTTTACAGAATCTTCGTC 58.541 40.000 0.00 0.00 0.00 4.20
3901 10767 5.060569 CGTCGATGTTTTACAGAATCTTCGT 59.939 40.000 0.00 0.00 0.00 3.85
3902 10768 5.060569 ACGTCGATGTTTTACAGAATCTTCG 59.939 40.000 3.92 0.00 0.00 3.79
3903 10769 6.390987 ACGTCGATGTTTTACAGAATCTTC 57.609 37.500 3.92 0.00 0.00 2.87
3904 10770 5.347907 GGACGTCGATGTTTTACAGAATCTT 59.652 40.000 12.40 0.00 0.00 2.40
3905 10771 4.863131 GGACGTCGATGTTTTACAGAATCT 59.137 41.667 12.40 0.00 0.00 2.40
3906 10772 4.624024 TGGACGTCGATGTTTTACAGAATC 59.376 41.667 12.40 0.00 0.00 2.52
3907 10773 4.387862 GTGGACGTCGATGTTTTACAGAAT 59.612 41.667 12.40 0.00 0.00 2.40
3908 10774 3.737266 GTGGACGTCGATGTTTTACAGAA 59.263 43.478 12.40 0.00 0.00 3.02
3909 10775 3.005050 AGTGGACGTCGATGTTTTACAGA 59.995 43.478 12.40 0.00 0.00 3.41
3910 10776 3.314553 AGTGGACGTCGATGTTTTACAG 58.685 45.455 12.40 0.00 0.00 2.74
3911 10777 3.374220 AGTGGACGTCGATGTTTTACA 57.626 42.857 12.40 6.52 0.00 2.41
3912 10778 3.855950 CCTAGTGGACGTCGATGTTTTAC 59.144 47.826 12.40 11.09 34.57 2.01
3913 10779 3.758023 TCCTAGTGGACGTCGATGTTTTA 59.242 43.478 12.40 0.00 37.46 1.52
3914 10780 2.559668 TCCTAGTGGACGTCGATGTTTT 59.440 45.455 12.40 1.04 37.46 2.43
3915 10781 2.165167 TCCTAGTGGACGTCGATGTTT 58.835 47.619 12.40 1.39 37.46 2.83
3916 10782 1.830279 TCCTAGTGGACGTCGATGTT 58.170 50.000 12.40 0.00 37.46 2.71
3917 10783 3.564262 TCCTAGTGGACGTCGATGT 57.436 52.632 10.75 10.75 37.46 3.06
3926 10792 2.532250 TGAGCATCTGTCCTAGTGGA 57.468 50.000 0.00 0.00 36.43 4.02
3927 10793 3.616956 TTTGAGCATCTGTCCTAGTGG 57.383 47.619 0.00 0.00 34.92 4.00
3928 10794 6.506500 AAATTTTGAGCATCTGTCCTAGTG 57.493 37.500 0.00 0.00 34.92 2.74
3929 10795 6.571150 GCAAAATTTTGAGCATCTGTCCTAGT 60.571 38.462 30.40 0.00 40.55 2.57
3930 10796 5.803967 GCAAAATTTTGAGCATCTGTCCTAG 59.196 40.000 30.40 2.71 40.55 3.02
3931 10797 5.336690 GGCAAAATTTTGAGCATCTGTCCTA 60.337 40.000 30.40 0.00 40.55 2.94
3932 10798 4.562143 GGCAAAATTTTGAGCATCTGTCCT 60.562 41.667 30.40 0.00 40.55 3.85
3933 10799 3.681417 GGCAAAATTTTGAGCATCTGTCC 59.319 43.478 30.40 16.29 40.55 4.02
3934 10800 4.563061 AGGCAAAATTTTGAGCATCTGTC 58.437 39.130 30.40 11.80 40.55 3.51
3935 10801 4.612264 AGGCAAAATTTTGAGCATCTGT 57.388 36.364 30.40 5.73 40.55 3.41
3936 10802 6.647895 ACTTTAGGCAAAATTTTGAGCATCTG 59.352 34.615 30.40 16.84 40.55 2.90
3937 10803 6.762333 ACTTTAGGCAAAATTTTGAGCATCT 58.238 32.000 30.40 19.70 40.55 2.90
3938 10804 6.646240 TGACTTTAGGCAAAATTTTGAGCATC 59.354 34.615 30.40 17.79 40.55 3.91
3939 10805 6.523840 TGACTTTAGGCAAAATTTTGAGCAT 58.476 32.000 30.40 17.89 40.55 3.79
3940 10806 5.911752 TGACTTTAGGCAAAATTTTGAGCA 58.088 33.333 30.40 17.37 40.55 4.26
3941 10807 6.870439 AGATGACTTTAGGCAAAATTTTGAGC 59.130 34.615 30.40 17.79 40.55 4.26
3942 10808 8.822652 AAGATGACTTTAGGCAAAATTTTGAG 57.177 30.769 30.40 20.75 35.08 3.02
3943 10809 8.420222 TGAAGATGACTTTAGGCAAAATTTTGA 58.580 29.630 30.40 10.48 37.10 2.69
3944 10810 8.592105 TGAAGATGACTTTAGGCAAAATTTTG 57.408 30.769 23.74 23.74 37.56 2.44
3945 10811 8.822652 CTGAAGATGACTTTAGGCAAAATTTT 57.177 30.769 0.00 0.00 36.50 1.82
3955 10821 9.421806 CTATAGCAATCCTGAAGATGACTTTAG 57.578 37.037 0.00 0.00 38.78 1.85
3956 10822 8.370940 CCTATAGCAATCCTGAAGATGACTTTA 58.629 37.037 0.00 0.00 36.39 1.85
3957 10823 7.071698 TCCTATAGCAATCCTGAAGATGACTTT 59.928 37.037 0.00 0.00 36.39 2.66
3958 10824 6.556495 TCCTATAGCAATCCTGAAGATGACTT 59.444 38.462 0.00 0.00 39.24 3.01
3959 10825 6.080682 TCCTATAGCAATCCTGAAGATGACT 58.919 40.000 0.00 0.00 34.56 3.41
3960 10826 6.352016 TCCTATAGCAATCCTGAAGATGAC 57.648 41.667 0.00 0.00 34.56 3.06
3961 10827 6.070366 CCATCCTATAGCAATCCTGAAGATGA 60.070 42.308 8.83 0.00 34.56 2.92
3962 10828 6.114089 CCATCCTATAGCAATCCTGAAGATG 58.886 44.000 0.00 0.00 34.56 2.90
3963 10829 5.191323 CCCATCCTATAGCAATCCTGAAGAT 59.809 44.000 0.00 0.00 36.48 2.40
3964 10830 4.533707 CCCATCCTATAGCAATCCTGAAGA 59.466 45.833 0.00 0.00 0.00 2.87
3965 10831 4.533707 TCCCATCCTATAGCAATCCTGAAG 59.466 45.833 0.00 0.00 0.00 3.02
3966 10832 4.502415 TCCCATCCTATAGCAATCCTGAA 58.498 43.478 0.00 0.00 0.00 3.02
3967 10833 4.146245 TCCCATCCTATAGCAATCCTGA 57.854 45.455 0.00 0.00 0.00 3.86
3968 10834 4.442612 CGATCCCATCCTATAGCAATCCTG 60.443 50.000 0.00 0.00 0.00 3.86
3969 10835 3.708631 CGATCCCATCCTATAGCAATCCT 59.291 47.826 0.00 0.00 0.00 3.24
3970 10836 3.706594 TCGATCCCATCCTATAGCAATCC 59.293 47.826 0.00 0.00 0.00 3.01
3971 10837 4.688021 GTCGATCCCATCCTATAGCAATC 58.312 47.826 0.00 0.00 0.00 2.67
3972 10838 3.131223 CGTCGATCCCATCCTATAGCAAT 59.869 47.826 0.00 0.00 0.00 3.56
3973 10839 2.492088 CGTCGATCCCATCCTATAGCAA 59.508 50.000 0.00 0.00 0.00 3.91
3974 10840 2.092323 CGTCGATCCCATCCTATAGCA 58.908 52.381 0.00 0.00 0.00 3.49
3975 10841 1.202313 GCGTCGATCCCATCCTATAGC 60.202 57.143 0.00 0.00 0.00 2.97
3976 10842 2.356382 GAGCGTCGATCCCATCCTATAG 59.644 54.545 0.00 0.00 0.00 1.31
3977 10843 2.366533 GAGCGTCGATCCCATCCTATA 58.633 52.381 0.00 0.00 0.00 1.31
3978 10844 1.178276 GAGCGTCGATCCCATCCTAT 58.822 55.000 0.00 0.00 0.00 2.57
3979 10845 0.894184 GGAGCGTCGATCCCATCCTA 60.894 60.000 18.86 0.00 31.04 2.94
3980 10846 2.203771 GGAGCGTCGATCCCATCCT 61.204 63.158 18.86 0.00 31.04 3.24
3981 10847 2.148558 GAGGAGCGTCGATCCCATCC 62.149 65.000 25.23 9.19 39.17 3.51
3982 10848 1.287503 GAGGAGCGTCGATCCCATC 59.712 63.158 25.23 13.94 39.17 3.51
3983 10849 2.203771 GGAGGAGCGTCGATCCCAT 61.204 63.158 25.23 8.54 39.17 4.00
3984 10850 2.833582 GGAGGAGCGTCGATCCCA 60.834 66.667 25.23 0.00 39.17 4.37


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.