Multiple sequence alignment - TraesCS1D01G065700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G065700 chr1D 100.000 4891 0 0 1 4891 47324780 47319890 0.000000e+00 9033.0
1 TraesCS1D01G065700 chr1D 95.349 172 8 0 2511 2682 39948936 39948765 1.730000e-69 274.0
2 TraesCS1D01G065700 chr1D 91.099 191 10 5 2500 2685 140137159 140136971 8.130000e-63 252.0
3 TraesCS1D01G065700 chr1D 80.337 178 24 10 2288 2460 380383369 380383198 1.850000e-24 124.0
4 TraesCS1D01G065700 chr1D 90.110 91 5 3 1261 1351 257365365 257365451 1.110000e-21 115.0
5 TraesCS1D01G065700 chr1A 86.168 2234 176 71 2728 4876 47203373 47201188 0.000000e+00 2290.0
6 TraesCS1D01G065700 chr1A 88.319 1541 93 28 250 1765 47205597 47204119 0.000000e+00 1768.0
7 TraesCS1D01G065700 chr1A 83.757 1613 160 50 3321 4889 47199021 47197467 0.000000e+00 1434.0
8 TraesCS1D01G065700 chr1A 91.250 720 43 11 1808 2515 47204110 47203399 0.000000e+00 963.0
9 TraesCS1D01G065700 chr1A 93.506 77 4 1 1270 1346 440885276 440885351 4.000000e-21 113.0
10 TraesCS1D01G065700 chr1A 92.063 63 3 2 125 187 251336275 251336215 2.430000e-13 87.9
11 TraesCS1D01G065700 chr1A 77.419 155 27 5 2288 2439 482827862 482828011 8.720000e-13 86.1
12 TraesCS1D01G065700 chr1A 97.059 34 1 0 119 152 497187113 497187146 1.900000e-04 58.4
13 TraesCS1D01G065700 chr1B 89.362 1504 105 31 2833 4309 67028739 67027264 0.000000e+00 1840.0
14 TraesCS1D01G065700 chr1B 91.189 942 44 16 1365 2296 67048076 67047164 0.000000e+00 1243.0
15 TraesCS1D01G065700 chr1B 93.506 770 27 11 506 1270 67048857 67048106 0.000000e+00 1123.0
16 TraesCS1D01G065700 chr1B 79.419 413 63 16 4483 4877 67027024 67026616 6.240000e-69 272.0
17 TraesCS1D01G065700 chr1B 89.313 131 14 0 2696 2826 67046899 67046769 1.090000e-36 165.0
18 TraesCS1D01G065700 chr1B 95.238 105 1 1 1 101 67049098 67048994 3.920000e-36 163.0
19 TraesCS1D01G065700 chr1B 78.704 108 22 1 398 505 667823713 667823819 2.440000e-08 71.3
20 TraesCS1D01G065700 chr1B 97.059 34 1 0 457 490 588218117 588218150 1.900000e-04 58.4
21 TraesCS1D01G065700 chr6A 78.160 1076 218 15 2782 3850 438272797 438271732 0.000000e+00 669.0
22 TraesCS1D01G065700 chr6A 94.595 74 3 1 1270 1343 509279058 509279130 4.000000e-21 113.0
23 TraesCS1D01G065700 chr6A 91.525 59 5 0 152 210 116590413 116590355 1.130000e-11 82.4
24 TraesCS1D01G065700 chr7D 97.740 177 3 1 2505 2680 105683786 105683610 2.210000e-78 303.0
25 TraesCS1D01G065700 chr7D 97.143 175 3 1 2503 2677 381000225 381000397 1.330000e-75 294.0
26 TraesCS1D01G065700 chr7D 76.415 212 39 10 277 486 5356043 5355841 2.410000e-18 104.0
27 TraesCS1D01G065700 chr7D 92.500 40 1 2 114 152 543628034 543628072 6.840000e-04 56.5
28 TraesCS1D01G065700 chr5A 94.767 172 9 0 2512 2683 484559256 484559427 8.070000e-68 268.0
29 TraesCS1D01G065700 chr5A 90.244 41 2 1 115 153 335514104 335514144 9.000000e-03 52.8
30 TraesCS1D01G065700 chr6D 95.758 165 7 0 2513 2677 431000180 431000016 2.900000e-67 267.0
31 TraesCS1D01G065700 chr6D 76.754 228 48 4 277 503 461352006 461351783 6.650000e-24 122.0
32 TraesCS1D01G065700 chr6D 94.595 74 3 1 1270 1343 368365285 368365357 4.000000e-21 113.0
33 TraesCS1D01G065700 chr6D 94.828 58 3 0 152 209 394591268 394591211 1.870000e-14 91.6
34 TraesCS1D01G065700 chr6D 87.879 66 7 1 126 190 363480314 363480249 5.250000e-10 76.8
35 TraesCS1D01G065700 chr5D 95.210 167 8 0 2513 2679 42949560 42949726 1.040000e-66 265.0
36 TraesCS1D01G065700 chr5D 96.053 76 3 0 1270 1345 330709258 330709183 1.850000e-24 124.0
37 TraesCS1D01G065700 chr5D 87.097 93 10 2 125 215 365320301 365320209 2.410000e-18 104.0
38 TraesCS1D01G065700 chr3D 94.706 170 9 0 2512 2681 329681757 329681926 1.040000e-66 265.0
39 TraesCS1D01G065700 chr4A 93.678 174 11 0 2513 2686 554788035 554787862 1.350000e-65 261.0
40 TraesCS1D01G065700 chr4A 88.542 96 7 3 1266 1361 274736181 274736272 4.000000e-21 113.0
41 TraesCS1D01G065700 chr2B 93.827 81 2 2 1267 1344 762916548 762916468 8.600000e-23 119.0
42 TraesCS1D01G065700 chr4D 93.590 78 1 3 1270 1343 402528005 402527928 4.000000e-21 113.0
43 TraesCS1D01G065700 chr4D 95.000 60 3 0 152 211 338797254 338797195 1.450000e-15 95.3
44 TraesCS1D01G065700 chr4D 94.595 37 0 1 116 152 460486521 460486555 6.840000e-04 56.5
45 TraesCS1D01G065700 chr4B 93.590 78 1 3 1270 1343 498374534 498374457 4.000000e-21 113.0
46 TraesCS1D01G065700 chr5B 91.525 59 5 0 152 210 137675302 137675244 1.130000e-11 82.4
47 TraesCS1D01G065700 chr3A 91.525 59 5 0 152 210 203993452 203993510 1.130000e-11 82.4
48 TraesCS1D01G065700 chr7A 84.091 88 9 4 125 209 704623166 704623081 4.060000e-11 80.5
49 TraesCS1D01G065700 chr6B 91.379 58 3 1 161 218 90937733 90937788 1.460000e-10 78.7
50 TraesCS1D01G065700 chr7B 97.143 35 1 0 118 152 746124656 746124690 5.290000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G065700 chr1D 47319890 47324780 4890 True 9033.00 9033 100.0000 1 4891 1 chr1D.!!$R2 4890
1 TraesCS1D01G065700 chr1A 47197467 47205597 8130 True 1613.75 2290 87.3735 250 4889 4 chr1A.!!$R2 4639
2 TraesCS1D01G065700 chr1B 67026616 67028739 2123 True 1056.00 1840 84.3905 2833 4877 2 chr1B.!!$R1 2044
3 TraesCS1D01G065700 chr1B 67046769 67049098 2329 True 673.50 1243 92.3115 1 2826 4 chr1B.!!$R2 2825
4 TraesCS1D01G065700 chr6A 438271732 438272797 1065 True 669.00 669 78.1600 2782 3850 1 chr6A.!!$R2 1068

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
145 150 0.320697 ACTCCCTCCGTCCGAAAAAG 59.679 55.0 0.00 0.0 0.0 2.27 F
1163 1196 0.108138 ATTACAGGTCAGTCAGCGCC 60.108 55.0 2.29 0.0 0.0 6.53 F
2678 2748 0.178926 TTGGGAACGGAGGGAGTACA 60.179 55.0 0.00 0.0 0.0 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1207 1240 0.454600 CCTTACTAAGCGTCTCGGCA 59.545 55.0 0.00 0.0 34.64 5.69 R
2732 2896 0.401356 TGAACTGGATGGAGCAAGCA 59.599 50.0 0.00 0.0 0.00 3.91 R
3900 4064 0.307760 CTGGACAAGTCAAACCACGC 59.692 55.0 2.29 0.0 0.00 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
101 106 4.334481 CCTCGTATTTTTCGGCCTAACATT 59.666 41.667 0.00 0.00 0.00 2.71
102 107 5.524646 CCTCGTATTTTTCGGCCTAACATTA 59.475 40.000 0.00 0.00 0.00 1.90
103 108 6.292703 CCTCGTATTTTTCGGCCTAACATTAG 60.293 42.308 0.00 0.00 0.00 1.73
104 109 6.108015 TCGTATTTTTCGGCCTAACATTAGT 58.892 36.000 0.00 0.00 0.00 2.24
105 110 6.594937 TCGTATTTTTCGGCCTAACATTAGTT 59.405 34.615 0.00 0.00 41.74 2.24
106 111 7.763528 TCGTATTTTTCGGCCTAACATTAGTTA 59.236 33.333 0.00 0.00 39.15 2.24
107 112 7.847564 CGTATTTTTCGGCCTAACATTAGTTAC 59.152 37.037 0.00 0.00 39.15 2.50
108 113 6.499234 TTTTTCGGCCTAACATTAGTTACC 57.501 37.500 0.00 0.00 39.15 2.85
109 114 4.822685 TTCGGCCTAACATTAGTTACCA 57.177 40.909 0.00 0.00 39.15 3.25
110 115 4.822685 TCGGCCTAACATTAGTTACCAA 57.177 40.909 0.00 0.00 39.15 3.67
111 116 5.362105 TCGGCCTAACATTAGTTACCAAT 57.638 39.130 0.00 0.00 39.15 3.16
112 117 5.747342 TCGGCCTAACATTAGTTACCAATT 58.253 37.500 0.00 0.00 39.15 2.32
113 118 6.181908 TCGGCCTAACATTAGTTACCAATTT 58.818 36.000 0.00 0.00 39.15 1.82
114 119 7.337167 TCGGCCTAACATTAGTTACCAATTTA 58.663 34.615 0.00 0.00 39.15 1.40
115 120 7.828223 TCGGCCTAACATTAGTTACCAATTTAA 59.172 33.333 0.00 0.00 39.15 1.52
116 121 8.626526 CGGCCTAACATTAGTTACCAATTTAAT 58.373 33.333 0.00 0.00 39.15 1.40
117 122 9.961265 GGCCTAACATTAGTTACCAATTTAATC 57.039 33.333 0.00 0.00 39.15 1.75
136 141 9.862149 ATTTAATCAATAAAATACTCCCTCCGT 57.138 29.630 0.00 0.00 37.06 4.69
137 142 8.897872 TTAATCAATAAAATACTCCCTCCGTC 57.102 34.615 0.00 0.00 0.00 4.79
138 143 5.286267 TCAATAAAATACTCCCTCCGTCC 57.714 43.478 0.00 0.00 0.00 4.79
139 144 4.056050 CAATAAAATACTCCCTCCGTCCG 58.944 47.826 0.00 0.00 0.00 4.79
140 145 1.856629 AAAATACTCCCTCCGTCCGA 58.143 50.000 0.00 0.00 0.00 4.55
141 146 1.856629 AAATACTCCCTCCGTCCGAA 58.143 50.000 0.00 0.00 0.00 4.30
142 147 1.856629 AATACTCCCTCCGTCCGAAA 58.143 50.000 0.00 0.00 0.00 3.46
143 148 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
144 149 1.631405 TACTCCCTCCGTCCGAAAAA 58.369 50.000 0.00 0.00 0.00 1.94
145 150 0.320697 ACTCCCTCCGTCCGAAAAAG 59.679 55.000 0.00 0.00 0.00 2.27
146 151 1.004200 TCCCTCCGTCCGAAAAAGC 60.004 57.895 0.00 0.00 0.00 3.51
147 152 1.003718 CCCTCCGTCCGAAAAAGCT 60.004 57.895 0.00 0.00 0.00 3.74
148 153 0.605589 CCCTCCGTCCGAAAAAGCTT 60.606 55.000 0.00 0.00 0.00 3.74
149 154 0.517316 CCTCCGTCCGAAAAAGCTTG 59.483 55.000 0.00 0.00 0.00 4.01
150 155 1.226746 CTCCGTCCGAAAAAGCTTGT 58.773 50.000 0.00 0.00 0.00 3.16
151 156 1.194772 CTCCGTCCGAAAAAGCTTGTC 59.805 52.381 0.00 0.00 0.00 3.18
152 157 1.202604 TCCGTCCGAAAAAGCTTGTCT 60.203 47.619 0.00 0.00 0.00 3.41
153 158 2.036217 TCCGTCCGAAAAAGCTTGTCTA 59.964 45.455 0.00 0.00 0.00 2.59
154 159 3.000727 CCGTCCGAAAAAGCTTGTCTAT 58.999 45.455 0.00 0.00 0.00 1.98
155 160 3.062234 CCGTCCGAAAAAGCTTGTCTATC 59.938 47.826 0.00 0.00 0.00 2.08
156 161 3.927142 CGTCCGAAAAAGCTTGTCTATCT 59.073 43.478 0.00 0.00 0.00 1.98
157 162 4.389077 CGTCCGAAAAAGCTTGTCTATCTT 59.611 41.667 0.00 0.00 0.00 2.40
158 163 5.622378 GTCCGAAAAAGCTTGTCTATCTTG 58.378 41.667 0.00 0.00 0.00 3.02
159 164 5.408604 GTCCGAAAAAGCTTGTCTATCTTGA 59.591 40.000 0.00 0.00 0.00 3.02
160 165 6.092807 GTCCGAAAAAGCTTGTCTATCTTGAT 59.907 38.462 0.00 0.00 0.00 2.57
161 166 6.092670 TCCGAAAAAGCTTGTCTATCTTGATG 59.907 38.462 0.00 0.00 0.00 3.07
162 167 5.736358 CGAAAAAGCTTGTCTATCTTGATGC 59.264 40.000 0.00 0.00 0.00 3.91
163 168 6.402983 CGAAAAAGCTTGTCTATCTTGATGCT 60.403 38.462 0.00 0.00 0.00 3.79
164 169 7.201556 CGAAAAAGCTTGTCTATCTTGATGCTA 60.202 37.037 0.00 0.00 0.00 3.49
165 170 7.928307 AAAAGCTTGTCTATCTTGATGCTAA 57.072 32.000 0.00 0.00 0.00 3.09
166 171 7.928307 AAAGCTTGTCTATCTTGATGCTAAA 57.072 32.000 0.00 0.00 0.00 1.85
167 172 8.517062 AAAGCTTGTCTATCTTGATGCTAAAT 57.483 30.769 0.00 0.00 0.00 1.40
168 173 9.618890 AAAGCTTGTCTATCTTGATGCTAAATA 57.381 29.630 0.00 0.00 0.00 1.40
169 174 8.600449 AGCTTGTCTATCTTGATGCTAAATAC 57.400 34.615 0.00 0.00 0.00 1.89
170 175 8.206867 AGCTTGTCTATCTTGATGCTAAATACA 58.793 33.333 0.00 0.00 0.00 2.29
171 176 8.997323 GCTTGTCTATCTTGATGCTAAATACAT 58.003 33.333 0.00 0.00 0.00 2.29
173 178 9.494271 TTGTCTATCTTGATGCTAAATACATCC 57.506 33.333 1.61 0.00 42.68 3.51
174 179 8.650490 TGTCTATCTTGATGCTAAATACATCCA 58.350 33.333 1.61 0.00 42.68 3.41
175 180 9.664332 GTCTATCTTGATGCTAAATACATCCAT 57.336 33.333 1.61 0.00 42.68 3.41
179 184 8.750515 TCTTGATGCTAAATACATCCATTTGA 57.249 30.769 1.61 0.00 42.68 2.69
180 185 8.843262 TCTTGATGCTAAATACATCCATTTGAG 58.157 33.333 1.61 0.00 42.68 3.02
181 186 7.514784 TGATGCTAAATACATCCATTTGAGG 57.485 36.000 1.61 0.00 42.68 3.86
182 187 6.491062 TGATGCTAAATACATCCATTTGAGGG 59.509 38.462 1.61 0.00 42.68 4.30
183 188 6.012337 TGCTAAATACATCCATTTGAGGGA 57.988 37.500 0.00 0.00 39.14 4.20
184 189 5.827797 TGCTAAATACATCCATTTGAGGGAC 59.172 40.000 0.00 0.00 37.23 4.46
185 190 5.827797 GCTAAATACATCCATTTGAGGGACA 59.172 40.000 0.00 0.00 37.23 4.02
186 191 6.321181 GCTAAATACATCCATTTGAGGGACAA 59.679 38.462 0.00 0.00 37.23 3.18
187 192 6.780457 AAATACATCCATTTGAGGGACAAG 57.220 37.500 0.00 0.00 39.77 3.16
188 193 2.450476 ACATCCATTTGAGGGACAAGC 58.550 47.619 0.00 0.00 39.77 4.01
189 194 2.042162 ACATCCATTTGAGGGACAAGCT 59.958 45.455 0.00 0.00 39.77 3.74
190 195 3.266772 ACATCCATTTGAGGGACAAGCTA 59.733 43.478 0.00 0.00 39.77 3.32
191 196 4.079558 ACATCCATTTGAGGGACAAGCTAT 60.080 41.667 0.00 0.00 39.77 2.97
192 197 4.591321 TCCATTTGAGGGACAAGCTATT 57.409 40.909 0.00 0.00 39.77 1.73
193 198 4.934356 TCCATTTGAGGGACAAGCTATTT 58.066 39.130 0.00 0.00 39.77 1.40
194 199 4.949856 TCCATTTGAGGGACAAGCTATTTC 59.050 41.667 0.00 0.00 39.77 2.17
195 200 4.201950 CCATTTGAGGGACAAGCTATTTCG 60.202 45.833 0.00 0.00 39.77 3.46
196 201 2.691409 TGAGGGACAAGCTATTTCGG 57.309 50.000 0.00 0.00 0.00 4.30
197 202 2.184533 TGAGGGACAAGCTATTTCGGA 58.815 47.619 0.00 0.00 0.00 4.55
198 203 2.093658 TGAGGGACAAGCTATTTCGGAC 60.094 50.000 0.00 0.00 0.00 4.79
199 204 1.134788 AGGGACAAGCTATTTCGGACG 60.135 52.381 0.00 0.00 0.00 4.79
200 205 1.287425 GGACAAGCTATTTCGGACGG 58.713 55.000 0.00 0.00 0.00 4.79
201 206 1.134907 GGACAAGCTATTTCGGACGGA 60.135 52.381 0.00 0.00 0.00 4.69
202 207 2.194271 GACAAGCTATTTCGGACGGAG 58.806 52.381 0.00 0.00 0.00 4.63
203 208 1.822990 ACAAGCTATTTCGGACGGAGA 59.177 47.619 0.00 0.00 0.00 3.71
204 209 2.159226 ACAAGCTATTTCGGACGGAGAG 60.159 50.000 0.00 0.00 0.00 3.20
205 210 2.054232 AGCTATTTCGGACGGAGAGA 57.946 50.000 0.00 0.00 0.00 3.10
206 211 1.950909 AGCTATTTCGGACGGAGAGAG 59.049 52.381 0.00 0.00 0.00 3.20
207 212 1.677052 GCTATTTCGGACGGAGAGAGT 59.323 52.381 0.00 0.00 0.00 3.24
208 213 2.877168 GCTATTTCGGACGGAGAGAGTA 59.123 50.000 0.00 0.00 0.00 2.59
209 214 3.502979 GCTATTTCGGACGGAGAGAGTAT 59.497 47.826 0.00 0.00 0.00 2.12
210 215 4.694509 GCTATTTCGGACGGAGAGAGTATA 59.305 45.833 0.00 0.00 0.00 1.47
211 216 5.163834 GCTATTTCGGACGGAGAGAGTATAG 60.164 48.000 0.00 0.00 0.00 1.31
212 217 3.834489 TTCGGACGGAGAGAGTATAGT 57.166 47.619 0.00 0.00 0.00 2.12
213 218 3.834489 TCGGACGGAGAGAGTATAGTT 57.166 47.619 0.00 0.00 0.00 2.24
214 219 4.944619 TCGGACGGAGAGAGTATAGTTA 57.055 45.455 0.00 0.00 0.00 2.24
215 220 5.480642 TCGGACGGAGAGAGTATAGTTAT 57.519 43.478 0.00 0.00 0.00 1.89
216 221 6.596309 TCGGACGGAGAGAGTATAGTTATA 57.404 41.667 0.00 0.00 0.00 0.98
217 222 6.997655 TCGGACGGAGAGAGTATAGTTATAA 58.002 40.000 0.00 0.00 0.00 0.98
218 223 7.619050 TCGGACGGAGAGAGTATAGTTATAAT 58.381 38.462 0.00 0.00 0.00 1.28
219 224 8.753133 TCGGACGGAGAGAGTATAGTTATAATA 58.247 37.037 0.00 0.00 0.00 0.98
220 225 9.033481 CGGACGGAGAGAGTATAGTTATAATAG 57.967 40.741 0.00 0.00 0.00 1.73
236 241 7.668052 AGTTATAATAGATTCTCTGAGTCGCCT 59.332 37.037 4.32 1.52 0.00 5.52
295 300 2.423892 TGTGAGCACCTTCGAGATACTC 59.576 50.000 0.00 0.00 0.00 2.59
301 306 1.309950 CCTTCGAGATACTCAGCCGA 58.690 55.000 0.00 0.00 0.00 5.54
304 309 1.746470 TCGAGATACTCAGCCGACAA 58.254 50.000 0.00 0.00 0.00 3.18
310 320 4.579869 AGATACTCAGCCGACAAAACATT 58.420 39.130 0.00 0.00 0.00 2.71
345 355 5.862924 AAATCACCACAAACGTCTCATAG 57.137 39.130 0.00 0.00 0.00 2.23
347 357 2.299013 TCACCACAAACGTCTCATAGCT 59.701 45.455 0.00 0.00 0.00 3.32
353 363 3.762288 ACAAACGTCTCATAGCTAGTGGA 59.238 43.478 0.00 0.00 0.00 4.02
357 367 1.609555 GTCTCATAGCTAGTGGACGGG 59.390 57.143 0.00 0.00 0.00 5.28
359 369 2.092049 TCTCATAGCTAGTGGACGGGAA 60.092 50.000 0.00 0.00 0.00 3.97
365 375 1.207329 GCTAGTGGACGGGAATGTCTT 59.793 52.381 0.00 0.00 38.91 3.01
369 379 2.372172 AGTGGACGGGAATGTCTTCTTT 59.628 45.455 0.00 0.00 38.91 2.52
372 382 2.742589 GGACGGGAATGTCTTCTTTCAC 59.257 50.000 0.00 0.00 38.91 3.18
379 389 4.750098 GGAATGTCTTCTTTCACTGAACGA 59.250 41.667 0.00 0.00 31.86 3.85
380 390 5.236478 GGAATGTCTTCTTTCACTGAACGAA 59.764 40.000 9.63 9.63 31.01 3.85
383 393 5.116180 TGTCTTCTTTCACTGAACGAACAT 58.884 37.500 6.61 0.00 29.25 2.71
385 395 5.463724 GTCTTCTTTCACTGAACGAACATCT 59.536 40.000 6.61 0.00 29.25 2.90
387 397 5.657470 TCTTTCACTGAACGAACATCTTG 57.343 39.130 0.00 0.00 0.00 3.02
420 430 8.313931 GCTAAAATAAATCAAGAAACATGCGAC 58.686 33.333 0.00 0.00 0.00 5.19
426 436 1.001487 CAAGAAACATGCGACAGCCAA 60.001 47.619 0.00 0.00 44.33 4.52
455 465 3.748568 GTCTAAGACTTCAACCTTGCTGG 59.251 47.826 0.00 0.00 42.93 4.85
461 471 2.203538 CAACCTTGCTGGGCTGGT 60.204 61.111 1.69 0.00 41.11 4.00
485 495 4.165372 TCCACCATAAGGAACCTAACCATC 59.835 45.833 0.00 0.00 38.69 3.51
486 496 4.461198 CACCATAAGGAACCTAACCATCC 58.539 47.826 0.00 0.00 38.69 3.51
493 503 2.223994 GGAACCTAACCATCCGAGCTAC 60.224 54.545 0.00 0.00 0.00 3.58
522 532 6.369065 CAGTTCACCCTTACTAGCTTTGTTAG 59.631 42.308 0.00 0.00 0.00 2.34
529 539 7.156673 CCCTTACTAGCTTTGTTAGTTGTACA 58.843 38.462 0.00 0.00 32.25 2.90
911 930 5.526479 TGGCTACTACATCTACAAGTACTCG 59.474 44.000 0.00 0.00 0.00 4.18
992 1016 2.665008 AAACCAGAGCTCTGCACGCA 62.665 55.000 34.09 0.00 42.47 5.24
1083 1116 1.008875 GCAGCGAGATCACGTTCACA 61.009 55.000 14.04 0.00 35.59 3.58
1163 1196 0.108138 ATTACAGGTCAGTCAGCGCC 60.108 55.000 2.29 0.00 0.00 6.53
1165 1198 4.363990 CAGGTCAGTCAGCGCCGT 62.364 66.667 2.29 0.00 0.00 5.68
1169 1202 1.138883 GTCAGTCAGCGCCGTGATA 59.861 57.895 2.29 0.00 0.00 2.15
1176 1209 0.373716 CAGCGCCGTGATAAACTTCC 59.626 55.000 2.29 0.00 0.00 3.46
1186 1219 3.620821 GTGATAAACTTCCTCTGCTCTGC 59.379 47.826 0.00 0.00 0.00 4.26
1207 1240 4.348168 TGCTGGTTAGTTCTTCCTCTTCTT 59.652 41.667 0.00 0.00 0.00 2.52
1222 1255 0.601558 TTCTTGCCGAGACGCTTAGT 59.398 50.000 0.00 0.00 33.02 2.24
1278 1311 2.877168 AGCGTAGTATGTTACTCCCTCG 59.123 50.000 0.00 0.00 40.14 4.63
1296 1329 6.756221 TCCCTCGGTAAAGAAATATAAGAGC 58.244 40.000 0.00 0.00 0.00 4.09
1297 1330 5.634020 CCCTCGGTAAAGAAATATAAGAGCG 59.366 44.000 0.00 0.00 0.00 5.03
1298 1331 6.214399 CCTCGGTAAAGAAATATAAGAGCGT 58.786 40.000 0.00 0.00 0.00 5.07
1299 1332 6.700520 CCTCGGTAAAGAAATATAAGAGCGTT 59.299 38.462 0.00 0.00 0.00 4.84
1300 1333 7.224167 CCTCGGTAAAGAAATATAAGAGCGTTT 59.776 37.037 0.00 0.00 0.00 3.60
1301 1334 9.241317 CTCGGTAAAGAAATATAAGAGCGTTTA 57.759 33.333 0.00 0.00 0.00 2.01
1302 1335 9.241317 TCGGTAAAGAAATATAAGAGCGTTTAG 57.759 33.333 0.00 0.00 0.00 1.85
1303 1336 9.241317 CGGTAAAGAAATATAAGAGCGTTTAGA 57.759 33.333 0.00 0.00 0.00 2.10
1336 1369 7.695869 AACGCTCTTATATTTCTTTACGGAG 57.304 36.000 0.00 0.00 0.00 4.63
1386 1426 8.970859 AAGTAATATGCTTTGTGAGAGCTAAT 57.029 30.769 0.00 0.00 40.75 1.73
1511 1554 1.480954 GTGAGTCATACATCCACCCGT 59.519 52.381 0.00 0.00 0.00 5.28
1594 1642 3.898529 TCGAAAGTCGAGGTTCTTCTTC 58.101 45.455 0.00 0.00 44.82 2.87
1595 1643 3.568853 TCGAAAGTCGAGGTTCTTCTTCT 59.431 43.478 0.00 0.00 44.82 2.85
1596 1644 4.758674 TCGAAAGTCGAGGTTCTTCTTCTA 59.241 41.667 0.00 0.00 44.82 2.10
1597 1645 5.090083 CGAAAGTCGAGGTTCTTCTTCTAG 58.910 45.833 6.48 0.00 43.74 2.43
1598 1646 5.335035 CGAAAGTCGAGGTTCTTCTTCTAGT 60.335 44.000 6.48 0.00 43.74 2.57
1599 1647 6.128336 CGAAAGTCGAGGTTCTTCTTCTAGTA 60.128 42.308 6.48 0.00 43.74 1.82
1600 1648 6.499234 AAGTCGAGGTTCTTCTTCTAGTAC 57.501 41.667 0.00 0.00 0.00 2.73
1782 1834 2.798283 TCGTTTTAGCGGTCAAGAACAG 59.202 45.455 0.00 0.00 0.00 3.16
1804 1856 2.681848 GACATCTTGGCATCTTGTCCTG 59.318 50.000 11.14 0.00 32.47 3.86
1806 1858 2.479566 TCTTGGCATCTTGTCCTGTC 57.520 50.000 0.00 0.00 0.00 3.51
1833 1885 9.787435 AAGTTACAAACTGAACTATTGGTGATA 57.213 29.630 0.00 0.00 41.91 2.15
1867 1919 5.254901 TGATGTGTGGACATTGATTGATGA 58.745 37.500 0.00 0.00 43.22 2.92
1903 1959 3.684788 GCGTAGTTTGATGATCAAGTGGT 59.315 43.478 8.01 0.00 37.70 4.16
1905 1961 5.350365 GCGTAGTTTGATGATCAAGTGGTTA 59.650 40.000 8.01 0.00 37.70 2.85
1906 1962 6.128391 GCGTAGTTTGATGATCAAGTGGTTAA 60.128 38.462 8.01 0.00 37.70 2.01
1923 1980 5.291614 GTGGTTAACAACAAGTTACTCACGA 59.708 40.000 8.32 0.00 42.19 4.35
2081 2139 1.525077 CTCCTCGCTCTACCTCGCT 60.525 63.158 0.00 0.00 0.00 4.93
2129 2187 2.663196 GTCACGAGGAAGGTGGGG 59.337 66.667 0.00 0.00 36.09 4.96
2166 2224 3.718210 ATCGGCGCCTCGTTCTTCC 62.718 63.158 26.68 0.00 0.00 3.46
2168 2226 2.890371 GGCGCCTCGTTCTTCCTA 59.110 61.111 22.15 0.00 0.00 2.94
2219 2277 4.568359 GTCAACATCTACATGCTCGTCATT 59.432 41.667 0.00 0.00 32.57 2.57
2289 2348 2.030457 CCGTCCGTCAGCAAATTGATAC 59.970 50.000 0.00 0.00 0.00 2.24
2309 2376 1.417890 CTCCCTCCGCCTTCATAACAT 59.582 52.381 0.00 0.00 0.00 2.71
2316 2383 1.267532 CGCCTTCATAACATCGTGCAC 60.268 52.381 6.82 6.82 0.00 4.57
2327 2394 8.458052 TCATAACATCGTGCACATAATTTTTCT 58.542 29.630 18.64 0.00 0.00 2.52
2335 2402 8.346300 TCGTGCACATAATTTTTCTAAAAGTCA 58.654 29.630 18.64 0.00 0.00 3.41
2347 2415 8.751302 TTTTCTAAAAGTCAAACCTCACAAAC 57.249 30.769 0.00 0.00 0.00 2.93
2357 2425 9.016438 AGTCAAACCTCACAAACTTTAACTAAA 57.984 29.630 0.00 0.00 0.00 1.85
2487 2557 5.240844 ACTTGGTCAACATTTGCTAGGTTAC 59.759 40.000 0.00 0.00 0.00 2.50
2522 2592 9.765795 AAAAATCTATATGAACTACTTCCTCCG 57.234 33.333 0.00 0.00 0.00 4.63
2523 2593 8.480133 AAATCTATATGAACTACTTCCTCCGT 57.520 34.615 0.00 0.00 0.00 4.69
2524 2594 8.480133 AATCTATATGAACTACTTCCTCCGTT 57.520 34.615 0.00 0.00 0.00 4.44
2525 2595 7.507733 TCTATATGAACTACTTCCTCCGTTC 57.492 40.000 0.00 0.00 37.02 3.95
2526 2596 3.889520 ATGAACTACTTCCTCCGTTCC 57.110 47.619 0.00 0.00 35.97 3.62
2527 2597 2.885616 TGAACTACTTCCTCCGTTCCT 58.114 47.619 0.00 0.00 35.97 3.36
2528 2598 4.038271 TGAACTACTTCCTCCGTTCCTA 57.962 45.455 0.00 0.00 35.97 2.94
2529 2599 4.410099 TGAACTACTTCCTCCGTTCCTAA 58.590 43.478 0.00 0.00 35.97 2.69
2530 2600 4.834496 TGAACTACTTCCTCCGTTCCTAAA 59.166 41.667 0.00 0.00 35.97 1.85
2531 2601 5.482878 TGAACTACTTCCTCCGTTCCTAAAT 59.517 40.000 0.00 0.00 35.97 1.40
2532 2602 6.664816 TGAACTACTTCCTCCGTTCCTAAATA 59.335 38.462 0.00 0.00 35.97 1.40
2533 2603 7.343833 TGAACTACTTCCTCCGTTCCTAAATAT 59.656 37.037 0.00 0.00 35.97 1.28
2534 2604 8.773033 AACTACTTCCTCCGTTCCTAAATATA 57.227 34.615 0.00 0.00 0.00 0.86
2535 2605 8.773033 ACTACTTCCTCCGTTCCTAAATATAA 57.227 34.615 0.00 0.00 0.00 0.98
2536 2606 8.858094 ACTACTTCCTCCGTTCCTAAATATAAG 58.142 37.037 0.00 0.00 0.00 1.73
2537 2607 7.672122 ACTTCCTCCGTTCCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
2538 2608 7.724287 ACTTCCTCCGTTCCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
2539 2609 7.564292 ACTTCCTCCGTTCCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
2540 2610 7.909485 TCCTCCGTTCCTAAATATAAGTCTT 57.091 36.000 0.00 0.00 0.00 3.01
2541 2611 8.315220 TCCTCCGTTCCTAAATATAAGTCTTT 57.685 34.615 0.00 0.00 0.00 2.52
2542 2612 8.765517 TCCTCCGTTCCTAAATATAAGTCTTTT 58.234 33.333 0.00 0.00 0.00 2.27
2543 2613 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
2575 2645 9.566530 TTTCAAATGAAATACAACATACGGATG 57.433 29.630 5.94 5.94 38.94 3.51
2577 2647 9.384764 TCAAATGAAATACAACATACGGATGTA 57.615 29.630 15.10 0.00 45.93 2.29
2595 2665 9.261180 ACGGATGTATGTAAACATATTTGAGAG 57.739 33.333 6.12 0.00 40.17 3.20
2596 2666 9.261180 CGGATGTATGTAAACATATTTGAGAGT 57.739 33.333 6.12 0.00 40.17 3.24
2615 2685 7.755591 TGAGAGTGTAGATTCATTCATTTTGC 58.244 34.615 0.00 0.00 0.00 3.68
2616 2686 7.609146 TGAGAGTGTAGATTCATTCATTTTGCT 59.391 33.333 0.00 0.00 0.00 3.91
2617 2687 7.983307 AGAGTGTAGATTCATTCATTTTGCTC 58.017 34.615 0.00 0.00 0.00 4.26
2618 2688 7.066766 AGAGTGTAGATTCATTCATTTTGCTCC 59.933 37.037 0.00 0.00 0.00 4.70
2619 2689 5.967674 GTGTAGATTCATTCATTTTGCTCCG 59.032 40.000 0.00 0.00 0.00 4.63
2620 2690 5.647658 TGTAGATTCATTCATTTTGCTCCGT 59.352 36.000 0.00 0.00 0.00 4.69
2621 2691 6.821160 TGTAGATTCATTCATTTTGCTCCGTA 59.179 34.615 0.00 0.00 0.00 4.02
2622 2692 6.949352 AGATTCATTCATTTTGCTCCGTAT 57.051 33.333 0.00 0.00 0.00 3.06
2623 2693 6.732154 AGATTCATTCATTTTGCTCCGTATG 58.268 36.000 0.00 0.00 0.00 2.39
2624 2694 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
2625 2695 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
2626 2696 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
2627 2697 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
2628 2698 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
2629 2699 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
2630 2700 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
2631 2701 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
2632 2702 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
2633 2703 5.648178 TTTGCTCCGTATGTAGTCACTTA 57.352 39.130 0.00 0.00 0.00 2.24
2634 2704 4.895224 TGCTCCGTATGTAGTCACTTAG 57.105 45.455 0.00 0.00 0.00 2.18
2635 2705 4.267536 TGCTCCGTATGTAGTCACTTAGT 58.732 43.478 0.00 0.00 0.00 2.24
2636 2706 5.430886 TGCTCCGTATGTAGTCACTTAGTA 58.569 41.667 0.00 0.00 0.00 1.82
2637 2707 5.526479 TGCTCCGTATGTAGTCACTTAGTAG 59.474 44.000 0.00 0.00 0.00 2.57
2638 2708 5.757320 GCTCCGTATGTAGTCACTTAGTAGA 59.243 44.000 0.00 0.00 0.00 2.59
2639 2709 6.259608 GCTCCGTATGTAGTCACTTAGTAGAA 59.740 42.308 0.00 0.00 0.00 2.10
2640 2710 7.041235 GCTCCGTATGTAGTCACTTAGTAGAAT 60.041 40.741 0.00 0.00 0.00 2.40
2641 2711 8.375608 TCCGTATGTAGTCACTTAGTAGAATC 57.624 38.462 0.00 0.00 0.00 2.52
2674 2744 4.102681 ACTTATATTTGGGAACGGAGGGAG 59.897 45.833 0.00 0.00 0.00 4.30
2678 2748 0.178926 TTGGGAACGGAGGGAGTACA 60.179 55.000 0.00 0.00 0.00 2.90
2681 2751 2.292389 TGGGAACGGAGGGAGTACATTA 60.292 50.000 0.00 0.00 0.00 1.90
2682 2752 2.970640 GGGAACGGAGGGAGTACATTAT 59.029 50.000 0.00 0.00 0.00 1.28
2683 2753 3.244112 GGGAACGGAGGGAGTACATTATG 60.244 52.174 0.00 0.00 0.00 1.90
2684 2754 3.244112 GGAACGGAGGGAGTACATTATGG 60.244 52.174 0.00 0.00 0.00 2.74
2686 2756 2.963782 ACGGAGGGAGTACATTATGGTC 59.036 50.000 0.00 0.00 0.00 4.02
2689 2759 3.256136 GGAGGGAGTACATTATGGTCGAG 59.744 52.174 0.00 0.00 0.00 4.04
2729 2893 0.379669 GTGCTTGCTCCATCCATTCG 59.620 55.000 0.00 0.00 0.00 3.34
2732 2896 1.742761 CTTGCTCCATCCATTCGTGT 58.257 50.000 0.00 0.00 0.00 4.49
2738 2902 0.179156 CCATCCATTCGTGTGCTTGC 60.179 55.000 0.00 0.00 0.00 4.01
2749 2913 0.111061 TGTGCTTGCTCCATCCAGTT 59.889 50.000 0.00 0.00 0.00 3.16
2867 3031 4.018597 AGCATCTTCCACTTCTTCCTCAAT 60.019 41.667 0.00 0.00 0.00 2.57
2873 3037 2.440409 CACTTCTTCCTCAATGTGGGG 58.560 52.381 1.16 0.00 40.17 4.96
2978 3142 2.475466 GGCCGTCGTCATCCTCGTA 61.475 63.158 0.00 0.00 0.00 3.43
3002 3166 1.320344 CCGTCTTCATCCCGGACTCA 61.320 60.000 0.73 0.00 44.41 3.41
3143 3307 2.359478 GGCCGACACAAATCCGGT 60.359 61.111 0.00 0.00 44.63 5.28
3149 3313 0.309612 GACACAAATCCGGTGCGTTT 59.690 50.000 0.00 0.00 39.87 3.60
3422 3586 2.656646 CTGCTCGTGTGCCTGGTA 59.343 61.111 0.00 0.00 0.00 3.25
3674 3838 1.078143 GTCCTTCCTCGCCATGCTT 60.078 57.895 0.00 0.00 0.00 3.91
3866 4030 1.901464 GCCCACACCCGACAAACAT 60.901 57.895 0.00 0.00 0.00 2.71
3869 4033 1.285641 CACACCCGACAAACATGCC 59.714 57.895 0.00 0.00 0.00 4.40
3896 4060 2.096013 GTCGCTTGAAATGTAAGAGGCC 59.904 50.000 0.00 0.00 0.00 5.19
3897 4061 2.027192 TCGCTTGAAATGTAAGAGGCCT 60.027 45.455 3.86 3.86 0.00 5.19
3900 4064 3.119352 GCTTGAAATGTAAGAGGCCTTGG 60.119 47.826 6.77 0.00 33.94 3.61
3920 4094 0.307760 CGTGGTTTGACTTGTCCAGC 59.692 55.000 0.00 0.00 0.00 4.85
3935 4109 7.490000 ACTTGTCCAGCTGTAATATACTGTAC 58.510 38.462 13.81 0.00 0.00 2.90
3940 4114 6.610020 TCCAGCTGTAATATACTGTACCAACT 59.390 38.462 13.81 0.00 0.00 3.16
3941 4115 7.125204 TCCAGCTGTAATATACTGTACCAACTT 59.875 37.037 13.81 0.00 0.00 2.66
3942 4116 7.769044 CCAGCTGTAATATACTGTACCAACTTT 59.231 37.037 13.81 0.00 0.00 2.66
3943 4117 9.162764 CAGCTGTAATATACTGTACCAACTTTT 57.837 33.333 5.25 0.00 0.00 2.27
3944 4118 9.734984 AGCTGTAATATACTGTACCAACTTTTT 57.265 29.630 0.00 0.00 0.00 1.94
3967 4141 3.935818 TTGAGGGAGTAACAACACCAA 57.064 42.857 0.00 0.00 0.00 3.67
4000 4174 4.755266 AGACTTCCACAACAAGTAGTGT 57.245 40.909 0.00 0.00 44.64 3.55
4004 4178 2.285083 TCCACAACAAGTAGTGTGTGC 58.715 47.619 3.38 0.00 40.60 4.57
4005 4179 1.003972 CCACAACAAGTAGTGTGTGCG 60.004 52.381 3.38 0.00 40.60 5.34
4009 4183 3.933955 ACAACAAGTAGTGTGTGCGTTTA 59.066 39.130 0.00 0.00 40.60 2.01
4012 4186 5.338614 ACAAGTAGTGTGTGCGTTTATTC 57.661 39.130 0.00 0.00 39.72 1.75
4013 4187 4.812091 ACAAGTAGTGTGTGCGTTTATTCA 59.188 37.500 0.00 0.00 39.72 2.57
4014 4188 5.294799 ACAAGTAGTGTGTGCGTTTATTCAA 59.705 36.000 0.00 0.00 39.72 2.69
4015 4189 5.591643 AGTAGTGTGTGCGTTTATTCAAG 57.408 39.130 0.00 0.00 0.00 3.02
4018 4192 3.498397 AGTGTGTGCGTTTATTCAAGGAG 59.502 43.478 0.00 0.00 0.00 3.69
4027 4201 7.270579 GTGCGTTTATTCAAGGAGAAAATGTAC 59.729 37.037 0.00 0.00 40.22 2.90
4028 4202 6.464834 GCGTTTATTCAAGGAGAAAATGTACG 59.535 38.462 0.00 0.00 40.22 3.67
4031 4205 8.938906 GTTTATTCAAGGAGAAAATGTACGGTA 58.061 33.333 0.00 0.00 40.22 4.02
4032 4206 8.712285 TTATTCAAGGAGAAAATGTACGGTAG 57.288 34.615 0.00 0.00 40.22 3.18
4033 4207 4.501071 TCAAGGAGAAAATGTACGGTAGC 58.499 43.478 0.00 0.00 0.00 3.58
4034 4208 4.020928 TCAAGGAGAAAATGTACGGTAGCA 60.021 41.667 0.00 0.00 0.00 3.49
4035 4209 4.755266 AGGAGAAAATGTACGGTAGCAT 57.245 40.909 0.00 0.00 0.00 3.79
4036 4210 4.694339 AGGAGAAAATGTACGGTAGCATC 58.306 43.478 0.00 0.00 0.00 3.91
4037 4211 4.161565 AGGAGAAAATGTACGGTAGCATCA 59.838 41.667 0.00 0.00 0.00 3.07
4038 4212 4.873827 GGAGAAAATGTACGGTAGCATCAA 59.126 41.667 0.00 0.00 0.00 2.57
4062 4236 0.527565 CAAAGGTTGATGGCCCTTCG 59.472 55.000 0.00 0.00 40.17 3.79
4068 4242 1.611491 GTTGATGGCCCTTCGTTTTCA 59.389 47.619 0.00 0.00 0.00 2.69
4083 4257 4.138817 CGTTTTCACGTGGTCTATTTTCG 58.861 43.478 17.00 5.21 41.84 3.46
4085 4259 4.977741 TTTCACGTGGTCTATTTTCGAC 57.022 40.909 17.00 0.00 0.00 4.20
4088 4262 4.370049 TCACGTGGTCTATTTTCGACAAA 58.630 39.130 17.00 0.00 33.11 2.83
4089 4263 4.446385 TCACGTGGTCTATTTTCGACAAAG 59.554 41.667 17.00 0.00 33.11 2.77
4090 4264 3.744426 ACGTGGTCTATTTTCGACAAAGG 59.256 43.478 0.00 0.00 33.11 3.11
4092 4266 4.449743 CGTGGTCTATTTTCGACAAAGGAA 59.550 41.667 0.00 0.00 33.11 3.36
4095 4270 7.461918 GTGGTCTATTTTCGACAAAGGAATAC 58.538 38.462 0.00 0.00 33.11 1.89
4101 4276 5.389859 TTTCGACAAAGGAATACGGTAGA 57.610 39.130 0.00 0.00 0.00 2.59
4108 4283 4.820894 AAGGAATACGGTAGAAGCTGTT 57.179 40.909 0.00 0.00 0.00 3.16
4111 4286 5.658468 AGGAATACGGTAGAAGCTGTTAAC 58.342 41.667 0.00 0.00 0.00 2.01
4114 4289 3.314541 ACGGTAGAAGCTGTTAACCAG 57.685 47.619 2.48 2.16 44.53 4.00
4133 4331 9.925545 TTAACCAGAGGTGTACTTATCATAGTA 57.074 33.333 0.00 0.00 35.34 1.82
4153 4358 6.222038 AGTATAGTGACAGTATTGGTGTGG 57.778 41.667 8.09 0.00 0.00 4.17
4161 4366 4.131596 ACAGTATTGGTGTGGTACAACAC 58.868 43.478 23.16 23.16 46.88 3.32
4174 4380 6.259167 TGTGGTACAACACTTTGAAGATGTAC 59.741 38.462 19.06 19.06 44.16 2.90
4215 4423 3.500448 TTTCACTTGTGCCTCATGGTA 57.500 42.857 0.00 0.00 35.27 3.25
4223 4431 2.890311 TGTGCCTCATGGTAAAGTTTGG 59.110 45.455 0.00 0.00 35.27 3.28
4258 4466 4.082026 GCATGCTGAGTTTGTTTTATCCCT 60.082 41.667 11.37 0.00 0.00 4.20
4278 4497 3.119173 CCTTGCTGTTTCTTTTGTGGACA 60.119 43.478 0.00 0.00 0.00 4.02
4281 4500 3.119531 TGCTGTTTCTTTTGTGGACACAG 60.120 43.478 5.21 0.00 42.94 3.66
4296 4515 3.254166 GGACACAGTTGCACATTCTCATT 59.746 43.478 0.00 0.00 0.00 2.57
4309 4528 6.463614 GCACATTCTCATTCTACCCAGTAGAT 60.464 42.308 5.36 0.00 43.45 1.98
4320 4571 8.651589 TTCTACCCAGTAGATTATCATAGGTG 57.348 38.462 5.36 0.00 43.45 4.00
4335 4586 7.881775 ATCATAGGTGGTGGATAAAAGAAAC 57.118 36.000 0.00 0.00 0.00 2.78
4340 4596 5.012354 AGGTGGTGGATAAAAGAAACGTCTA 59.988 40.000 0.00 0.00 32.16 2.59
4343 4599 5.353123 TGGTGGATAAAAGAAACGTCTATGC 59.647 40.000 0.00 0.00 32.16 3.14
4354 4610 5.185249 AGAAACGTCTATGCCAAAGTCTCTA 59.815 40.000 0.00 0.00 29.93 2.43
4362 4618 3.273434 TGCCAAAGTCTCTATCACATGC 58.727 45.455 0.00 0.00 0.00 4.06
4365 4621 5.118990 GCCAAAGTCTCTATCACATGCTAA 58.881 41.667 0.00 0.00 0.00 3.09
4372 4628 8.023021 AGTCTCTATCACATGCTAAACCATTA 57.977 34.615 0.00 0.00 0.00 1.90
4373 4629 8.486210 AGTCTCTATCACATGCTAAACCATTAA 58.514 33.333 0.00 0.00 0.00 1.40
4376 4632 9.888878 CTCTATCACATGCTAAACCATTAAATG 57.111 33.333 0.00 0.00 0.00 2.32
4383 4639 7.331687 ACATGCTAAACCATTAAATGAAGTTGC 59.668 33.333 0.00 0.00 0.00 4.17
4387 4643 8.435430 GCTAAACCATTAAATGAAGTTGCTTTC 58.565 33.333 0.00 0.00 0.00 2.62
4429 4685 0.884704 GGGTTTGAGCGTGCTTCTCA 60.885 55.000 0.00 0.20 38.67 3.27
4430 4686 0.235926 GGTTTGAGCGTGCTTCTCAC 59.764 55.000 0.00 0.00 39.99 3.51
4445 4701 1.197036 TCTCACTCTCGTGTGTTAGCG 59.803 52.381 0.00 0.00 41.89 4.26
4454 4710 1.006832 GTGTGTTAGCGGCCTATGTG 58.993 55.000 0.00 0.00 0.00 3.21
4455 4711 0.742990 TGTGTTAGCGGCCTATGTGC 60.743 55.000 0.00 0.00 0.00 4.57
4461 8518 2.045438 CGGCCTATGTGCAACCCA 60.045 61.111 0.00 0.00 34.36 4.51
4466 8523 2.488891 GGCCTATGTGCAACCCATATCA 60.489 50.000 0.00 0.00 34.36 2.15
4479 8536 8.872134 TGCAACCCATATCATTTTTCATATCAT 58.128 29.630 0.00 0.00 0.00 2.45
4516 8573 2.028020 GGACCTCCTAATTCCCGCATAG 60.028 54.545 0.00 0.00 0.00 2.23
4518 8575 2.900546 ACCTCCTAATTCCCGCATAGAG 59.099 50.000 0.00 0.00 0.00 2.43
4539 8596 0.464373 GATGGAGGCCGAGCAAATGA 60.464 55.000 0.00 0.00 0.00 2.57
4540 8597 0.034186 ATGGAGGCCGAGCAAATGAA 60.034 50.000 0.00 0.00 0.00 2.57
4551 8608 0.176449 GCAAATGAACAGGGGATGCC 59.824 55.000 0.00 0.00 0.00 4.40
4552 8609 1.856629 CAAATGAACAGGGGATGCCT 58.143 50.000 2.19 0.00 0.00 4.75
4557 8614 0.257039 GAACAGGGGATGCCTGATGT 59.743 55.000 2.19 3.32 38.52 3.06
4611 8668 4.486887 CCGGTTCGGGGTTCTTTT 57.513 55.556 0.00 0.00 44.15 2.27
4612 8669 2.723231 CCGGTTCGGGGTTCTTTTT 58.277 52.632 0.00 0.00 44.15 1.94
4653 8710 8.389779 TCCTTTTTCTGTTTTTGCTTTTCTTT 57.610 26.923 0.00 0.00 0.00 2.52
4678 8735 8.568732 TTTTAGCGAAAACTTGAAATTCGAAT 57.431 26.923 4.39 4.39 46.50 3.34
4679 8736 7.547285 TTAGCGAAAACTTGAAATTCGAATG 57.453 32.000 12.25 0.84 46.50 2.67
4696 8753 9.601971 AATTCGAATGATTTGCAAGAAAAATTG 57.398 25.926 12.25 0.00 0.00 2.32
4709 8766 8.684520 TGCAAGAAAAATTGAAACAATTCCAAT 58.315 25.926 9.60 0.00 34.49 3.16
4764 8821 9.740239 ATATCCATGAATTCTGAAAATTGTTCG 57.260 29.630 7.05 0.00 0.00 3.95
4765 8822 5.863397 TCCATGAATTCTGAAAATTGTTCGC 59.137 36.000 7.05 0.00 0.00 4.70
4766 8823 5.634439 CCATGAATTCTGAAAATTGTTCGCA 59.366 36.000 7.05 0.00 0.00 5.10
4767 8824 6.145858 CCATGAATTCTGAAAATTGTTCGCAA 59.854 34.615 7.05 0.00 41.87 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 50 6.688578 TGGTCCGAAGAGAGTAATATATTGC 58.311 40.000 8.28 6.83 0.00 3.56
110 115 9.862149 ACGGAGGGAGTATTTTATTGATTAAAT 57.138 29.630 0.00 0.00 30.03 1.40
111 116 9.333724 GACGGAGGGAGTATTTTATTGATTAAA 57.666 33.333 0.00 0.00 0.00 1.52
112 117 7.935210 GGACGGAGGGAGTATTTTATTGATTAA 59.065 37.037 0.00 0.00 0.00 1.40
113 118 7.447594 GGACGGAGGGAGTATTTTATTGATTA 58.552 38.462 0.00 0.00 0.00 1.75
114 119 6.296803 GGACGGAGGGAGTATTTTATTGATT 58.703 40.000 0.00 0.00 0.00 2.57
115 120 5.510861 CGGACGGAGGGAGTATTTTATTGAT 60.511 44.000 0.00 0.00 0.00 2.57
116 121 4.202182 CGGACGGAGGGAGTATTTTATTGA 60.202 45.833 0.00 0.00 0.00 2.57
117 122 4.056050 CGGACGGAGGGAGTATTTTATTG 58.944 47.826 0.00 0.00 0.00 1.90
118 123 3.962718 TCGGACGGAGGGAGTATTTTATT 59.037 43.478 0.00 0.00 0.00 1.40
119 124 3.569491 TCGGACGGAGGGAGTATTTTAT 58.431 45.455 0.00 0.00 0.00 1.40
120 125 3.017048 TCGGACGGAGGGAGTATTTTA 57.983 47.619 0.00 0.00 0.00 1.52
121 126 1.856629 TCGGACGGAGGGAGTATTTT 58.143 50.000 0.00 0.00 0.00 1.82
122 127 1.856629 TTCGGACGGAGGGAGTATTT 58.143 50.000 0.00 0.00 0.00 1.40
123 128 1.856629 TTTCGGACGGAGGGAGTATT 58.143 50.000 0.00 0.00 0.00 1.89
124 129 1.856629 TTTTCGGACGGAGGGAGTAT 58.143 50.000 0.00 0.00 0.00 2.12
125 130 1.547372 CTTTTTCGGACGGAGGGAGTA 59.453 52.381 0.00 0.00 0.00 2.59
126 131 0.320697 CTTTTTCGGACGGAGGGAGT 59.679 55.000 0.00 0.00 0.00 3.85
127 132 1.019805 GCTTTTTCGGACGGAGGGAG 61.020 60.000 0.00 0.00 0.00 4.30
128 133 1.004200 GCTTTTTCGGACGGAGGGA 60.004 57.895 0.00 0.00 0.00 4.20
129 134 0.605589 AAGCTTTTTCGGACGGAGGG 60.606 55.000 0.00 0.00 0.00 4.30
130 135 0.517316 CAAGCTTTTTCGGACGGAGG 59.483 55.000 0.00 0.00 0.00 4.30
131 136 1.194772 GACAAGCTTTTTCGGACGGAG 59.805 52.381 0.00 0.00 0.00 4.63
132 137 1.202604 AGACAAGCTTTTTCGGACGGA 60.203 47.619 0.00 0.00 0.00 4.69
133 138 1.226746 AGACAAGCTTTTTCGGACGG 58.773 50.000 0.00 0.00 0.00 4.79
134 139 3.927142 AGATAGACAAGCTTTTTCGGACG 59.073 43.478 0.00 0.00 0.00 4.79
135 140 5.408604 TCAAGATAGACAAGCTTTTTCGGAC 59.591 40.000 0.00 0.00 0.00 4.79
136 141 5.547465 TCAAGATAGACAAGCTTTTTCGGA 58.453 37.500 0.00 0.00 0.00 4.55
137 142 5.862924 TCAAGATAGACAAGCTTTTTCGG 57.137 39.130 0.00 0.00 0.00 4.30
138 143 5.736358 GCATCAAGATAGACAAGCTTTTTCG 59.264 40.000 0.00 0.00 0.00 3.46
139 144 6.850555 AGCATCAAGATAGACAAGCTTTTTC 58.149 36.000 0.00 0.00 0.00 2.29
140 145 6.830873 AGCATCAAGATAGACAAGCTTTTT 57.169 33.333 0.00 0.00 0.00 1.94
141 146 7.928307 TTAGCATCAAGATAGACAAGCTTTT 57.072 32.000 0.00 0.00 32.70 2.27
142 147 7.928307 TTTAGCATCAAGATAGACAAGCTTT 57.072 32.000 0.00 0.00 32.70 3.51
143 148 9.050601 GTATTTAGCATCAAGATAGACAAGCTT 57.949 33.333 0.00 0.00 32.70 3.74
144 149 8.206867 TGTATTTAGCATCAAGATAGACAAGCT 58.793 33.333 0.00 0.00 35.06 3.74
145 150 8.370493 TGTATTTAGCATCAAGATAGACAAGC 57.630 34.615 0.00 0.00 0.00 4.01
147 152 9.494271 GGATGTATTTAGCATCAAGATAGACAA 57.506 33.333 7.46 0.00 43.17 3.18
148 153 8.650490 TGGATGTATTTAGCATCAAGATAGACA 58.350 33.333 7.46 0.00 43.17 3.41
149 154 9.664332 ATGGATGTATTTAGCATCAAGATAGAC 57.336 33.333 7.46 0.00 43.17 2.59
153 158 9.358406 TCAAATGGATGTATTTAGCATCAAGAT 57.642 29.630 7.46 0.00 43.17 2.40
154 159 8.750515 TCAAATGGATGTATTTAGCATCAAGA 57.249 30.769 7.46 0.00 43.17 3.02
155 160 8.080417 CCTCAAATGGATGTATTTAGCATCAAG 58.920 37.037 7.46 0.00 43.17 3.02
156 161 7.014518 CCCTCAAATGGATGTATTTAGCATCAA 59.985 37.037 7.46 0.00 43.17 2.57
157 162 6.491062 CCCTCAAATGGATGTATTTAGCATCA 59.509 38.462 7.46 0.00 43.17 3.07
158 163 6.716628 TCCCTCAAATGGATGTATTTAGCATC 59.283 38.462 0.00 0.00 41.30 3.91
159 164 6.491403 GTCCCTCAAATGGATGTATTTAGCAT 59.509 38.462 0.00 0.00 33.65 3.79
160 165 5.827797 GTCCCTCAAATGGATGTATTTAGCA 59.172 40.000 0.00 0.00 33.65 3.49
161 166 5.827797 TGTCCCTCAAATGGATGTATTTAGC 59.172 40.000 0.00 0.00 33.65 3.09
162 167 7.469181 GCTTGTCCCTCAAATGGATGTATTTAG 60.469 40.741 0.00 0.00 35.48 1.85
163 168 6.321181 GCTTGTCCCTCAAATGGATGTATTTA 59.679 38.462 0.00 0.00 35.48 1.40
164 169 5.127682 GCTTGTCCCTCAAATGGATGTATTT 59.872 40.000 0.00 0.00 35.48 1.40
165 170 4.646492 GCTTGTCCCTCAAATGGATGTATT 59.354 41.667 0.00 0.00 35.48 1.89
166 171 4.079558 AGCTTGTCCCTCAAATGGATGTAT 60.080 41.667 0.00 0.00 35.48 2.29
167 172 3.266772 AGCTTGTCCCTCAAATGGATGTA 59.733 43.478 0.00 0.00 35.48 2.29
168 173 2.042162 AGCTTGTCCCTCAAATGGATGT 59.958 45.455 0.00 0.00 35.48 3.06
169 174 2.731572 AGCTTGTCCCTCAAATGGATG 58.268 47.619 0.00 0.00 35.48 3.51
170 175 4.803329 ATAGCTTGTCCCTCAAATGGAT 57.197 40.909 0.00 0.00 35.48 3.41
171 176 4.591321 AATAGCTTGTCCCTCAAATGGA 57.409 40.909 0.00 0.00 35.48 3.41
172 177 4.201950 CGAAATAGCTTGTCCCTCAAATGG 60.202 45.833 0.00 0.00 35.48 3.16
173 178 4.201950 CCGAAATAGCTTGTCCCTCAAATG 60.202 45.833 0.00 0.00 35.48 2.32
174 179 3.947834 CCGAAATAGCTTGTCCCTCAAAT 59.052 43.478 0.00 0.00 35.48 2.32
175 180 3.008594 TCCGAAATAGCTTGTCCCTCAAA 59.991 43.478 0.00 0.00 35.48 2.69
176 181 2.569853 TCCGAAATAGCTTGTCCCTCAA 59.430 45.455 0.00 0.00 34.61 3.02
177 182 2.093658 GTCCGAAATAGCTTGTCCCTCA 60.094 50.000 0.00 0.00 0.00 3.86
178 183 2.552031 GTCCGAAATAGCTTGTCCCTC 58.448 52.381 0.00 0.00 0.00 4.30
179 184 1.134788 CGTCCGAAATAGCTTGTCCCT 60.135 52.381 0.00 0.00 0.00 4.20
180 185 1.287425 CGTCCGAAATAGCTTGTCCC 58.713 55.000 0.00 0.00 0.00 4.46
181 186 1.134907 TCCGTCCGAAATAGCTTGTCC 60.135 52.381 0.00 0.00 0.00 4.02
182 187 2.159282 TCTCCGTCCGAAATAGCTTGTC 60.159 50.000 0.00 0.00 0.00 3.18
183 188 1.822990 TCTCCGTCCGAAATAGCTTGT 59.177 47.619 0.00 0.00 0.00 3.16
184 189 2.099263 TCTCTCCGTCCGAAATAGCTTG 59.901 50.000 0.00 0.00 0.00 4.01
185 190 2.359531 CTCTCTCCGTCCGAAATAGCTT 59.640 50.000 0.00 0.00 0.00 3.74
186 191 1.950909 CTCTCTCCGTCCGAAATAGCT 59.049 52.381 0.00 0.00 0.00 3.32
187 192 1.677052 ACTCTCTCCGTCCGAAATAGC 59.323 52.381 0.00 0.00 0.00 2.97
188 193 5.933463 ACTATACTCTCTCCGTCCGAAATAG 59.067 44.000 0.00 0.00 0.00 1.73
189 194 5.862845 ACTATACTCTCTCCGTCCGAAATA 58.137 41.667 0.00 0.00 0.00 1.40
190 195 4.716794 ACTATACTCTCTCCGTCCGAAAT 58.283 43.478 0.00 0.00 0.00 2.17
191 196 4.148128 ACTATACTCTCTCCGTCCGAAA 57.852 45.455 0.00 0.00 0.00 3.46
192 197 3.834489 ACTATACTCTCTCCGTCCGAA 57.166 47.619 0.00 0.00 0.00 4.30
193 198 3.834489 AACTATACTCTCTCCGTCCGA 57.166 47.619 0.00 0.00 0.00 4.55
194 199 7.846644 ATTATAACTATACTCTCTCCGTCCG 57.153 40.000 0.00 0.00 0.00 4.79
211 216 8.948145 TAGGCGACTCAGAGAATCTATTATAAC 58.052 37.037 3.79 0.00 43.92 1.89
212 217 8.948145 GTAGGCGACTCAGAGAATCTATTATAA 58.052 37.037 3.79 0.00 43.92 0.98
213 218 7.278203 CGTAGGCGACTCAGAGAATCTATTATA 59.722 40.741 3.79 0.00 43.92 0.98
214 219 6.092944 CGTAGGCGACTCAGAGAATCTATTAT 59.907 42.308 3.79 0.00 43.92 1.28
215 220 5.408909 CGTAGGCGACTCAGAGAATCTATTA 59.591 44.000 3.79 0.00 43.92 0.98
216 221 4.214545 CGTAGGCGACTCAGAGAATCTATT 59.785 45.833 3.79 0.00 43.92 1.73
217 222 3.749088 CGTAGGCGACTCAGAGAATCTAT 59.251 47.826 3.79 0.00 43.92 1.98
218 223 3.132160 CGTAGGCGACTCAGAGAATCTA 58.868 50.000 3.79 0.00 43.92 1.98
219 224 1.944024 CGTAGGCGACTCAGAGAATCT 59.056 52.381 3.79 0.00 46.12 2.40
220 225 1.941294 TCGTAGGCGACTCAGAGAATC 59.059 52.381 3.79 0.00 42.81 2.52
236 241 1.399440 GCCACGACACAGTATCTCGTA 59.601 52.381 0.00 0.00 38.57 3.43
295 300 3.963665 TCTCAAAATGTTTTGTCGGCTG 58.036 40.909 15.51 0.00 45.77 4.85
310 320 9.474920 GTTTGTGGTGATTTTATCAATCTCAAA 57.525 29.630 12.30 12.30 41.69 2.69
322 332 5.334879 GCTATGAGACGTTTGTGGTGATTTT 60.335 40.000 0.00 0.00 0.00 1.82
325 335 3.055819 AGCTATGAGACGTTTGTGGTGAT 60.056 43.478 0.00 0.00 0.00 3.06
345 355 0.824759 AGACATTCCCGTCCACTAGC 59.175 55.000 0.00 0.00 36.52 3.42
347 357 2.816411 AGAAGACATTCCCGTCCACTA 58.184 47.619 0.00 0.00 36.52 2.74
353 363 3.071023 TCAGTGAAAGAAGACATTCCCGT 59.929 43.478 0.00 0.00 35.94 5.28
357 367 5.907197 TCGTTCAGTGAAAGAAGACATTC 57.093 39.130 17.63 0.00 35.52 2.67
359 369 5.116180 TGTTCGTTCAGTGAAAGAAGACAT 58.884 37.500 27.57 0.00 39.71 3.06
365 375 5.356426 TCAAGATGTTCGTTCAGTGAAAGA 58.644 37.500 16.26 16.26 0.00 2.52
369 379 4.584327 TCTCAAGATGTTCGTTCAGTGA 57.416 40.909 0.00 0.00 0.00 3.41
372 382 4.377841 GCCTTTCTCAAGATGTTCGTTCAG 60.378 45.833 0.00 0.00 30.57 3.02
407 417 1.317613 TTGGCTGTCGCATGTTTCTT 58.682 45.000 0.00 0.00 38.10 2.52
410 420 0.961019 ACATTGGCTGTCGCATGTTT 59.039 45.000 0.00 0.00 38.10 2.83
412 422 2.174334 GACATTGGCTGTCGCATGT 58.826 52.632 0.00 0.00 44.58 3.21
420 430 4.573900 AGTCTTAGACTTGACATTGGCTG 58.426 43.478 9.37 0.00 40.28 4.85
438 448 0.538287 GCCCAGCAAGGTTGAAGTCT 60.538 55.000 0.00 0.00 34.66 3.24
449 459 2.203480 GTGGAACCAGCCCAGCAA 60.203 61.111 0.00 0.00 33.75 3.91
461 471 3.917629 TGGTTAGGTTCCTTATGGTGGAA 59.082 43.478 0.00 0.00 40.85 3.53
469 479 2.433239 GCTCGGATGGTTAGGTTCCTTA 59.567 50.000 0.00 0.00 0.00 2.69
475 485 1.030457 CGTAGCTCGGATGGTTAGGT 58.970 55.000 0.00 0.00 35.71 3.08
476 486 3.867723 CGTAGCTCGGATGGTTAGG 57.132 57.895 0.00 0.00 35.71 2.69
493 503 2.735762 GCTAGTAAGGGTGAACTGAGCG 60.736 54.545 0.00 0.00 0.00 5.03
664 679 5.994887 AAAACTGCGTTGTCAATGTAGTA 57.005 34.783 23.58 2.20 41.58 1.82
665 680 4.893424 AAAACTGCGTTGTCAATGTAGT 57.107 36.364 19.35 19.35 43.80 2.73
666 681 5.845953 CAGTAAAACTGCGTTGTCAATGTAG 59.154 40.000 18.20 18.20 39.62 2.74
955 979 3.619038 GGTTTGACTAAGAGGCGATTCTG 59.381 47.826 0.00 0.00 0.00 3.02
992 1016 1.496429 CCCCTCCTGGCATATTCAACT 59.504 52.381 0.00 0.00 0.00 3.16
1083 1116 1.196766 TGAGGCAGCTCATCACCACT 61.197 55.000 0.00 0.00 29.45 4.00
1163 1196 3.862267 CAGAGCAGAGGAAGTTTATCACG 59.138 47.826 0.00 0.00 0.00 4.35
1165 1198 3.517100 AGCAGAGCAGAGGAAGTTTATCA 59.483 43.478 0.00 0.00 0.00 2.15
1169 1202 1.271271 CCAGCAGAGCAGAGGAAGTTT 60.271 52.381 0.00 0.00 0.00 2.66
1176 1209 2.233431 AGAACTAACCAGCAGAGCAGAG 59.767 50.000 0.00 0.00 0.00 3.35
1186 1219 4.693095 GCAAGAAGAGGAAGAACTAACCAG 59.307 45.833 0.00 0.00 0.00 4.00
1207 1240 0.454600 CCTTACTAAGCGTCTCGGCA 59.545 55.000 0.00 0.00 34.64 5.69
1258 1291 2.031333 CCGAGGGAGTAACATACTACGC 60.031 54.545 0.00 0.00 40.68 4.42
1308 1341 9.241317 CCGTAAAGAAATATAAGAGCGTTTAGA 57.759 33.333 0.00 0.00 0.00 2.10
1309 1342 9.241317 TCCGTAAAGAAATATAAGAGCGTTTAG 57.759 33.333 0.00 0.00 0.00 1.85
1310 1343 9.241317 CTCCGTAAAGAAATATAAGAGCGTTTA 57.759 33.333 0.00 0.00 0.00 2.01
1311 1344 7.224167 CCTCCGTAAAGAAATATAAGAGCGTTT 59.776 37.037 0.00 0.00 0.00 3.60
1312 1345 6.700520 CCTCCGTAAAGAAATATAAGAGCGTT 59.299 38.462 0.00 0.00 0.00 4.84
1313 1346 6.214399 CCTCCGTAAAGAAATATAAGAGCGT 58.786 40.000 0.00 0.00 0.00 5.07
1336 1369 5.887035 ACTACAGTACTTGTCAGATACTCCC 59.113 44.000 0.00 0.00 41.29 4.30
1386 1426 0.539986 GGCCGGATTCACAGGAGTTA 59.460 55.000 5.05 0.00 35.91 2.24
1387 1427 1.299976 GGCCGGATTCACAGGAGTT 59.700 57.895 5.05 0.00 35.91 3.01
1388 1428 1.488705 TTGGCCGGATTCACAGGAGT 61.489 55.000 5.05 0.00 35.91 3.85
1595 1643 9.170734 CACAATCAAGTACAGTACTAGGTACTA 57.829 37.037 20.47 10.72 46.08 1.82
1597 1645 8.048534 TCACAATCAAGTACAGTACTAGGTAC 57.951 38.462 13.87 13.18 38.26 3.34
1598 1646 7.886970 ACTCACAATCAAGTACAGTACTAGGTA 59.113 37.037 13.87 0.77 38.26 3.08
1599 1647 6.720288 ACTCACAATCAAGTACAGTACTAGGT 59.280 38.462 13.87 5.46 38.26 3.08
1600 1648 7.094334 TGACTCACAATCAAGTACAGTACTAGG 60.094 40.741 13.87 9.43 38.26 3.02
1792 1844 4.065088 TGTAACTTGACAGGACAAGATGC 58.935 43.478 16.23 9.75 46.85 3.91
1793 1845 6.260936 AGTTTGTAACTTGACAGGACAAGATG 59.739 38.462 16.23 0.00 46.85 2.90
1804 1856 7.855904 CACCAATAGTTCAGTTTGTAACTTGAC 59.144 37.037 0.00 0.00 40.46 3.18
1806 1858 7.925993 TCACCAATAGTTCAGTTTGTAACTTG 58.074 34.615 0.00 0.00 40.46 3.16
1845 1897 5.823209 TCATCAATCAATGTCCACACATC 57.177 39.130 0.00 0.00 42.89 3.06
1867 1919 4.408182 AACTACGCAATAGCTCCATCTT 57.592 40.909 0.00 0.00 39.10 2.40
1903 1959 5.663456 ACCTCGTGAGTAACTTGTTGTTAA 58.337 37.500 0.00 0.00 42.12 2.01
1905 1961 4.133013 ACCTCGTGAGTAACTTGTTGTT 57.867 40.909 0.00 0.00 42.31 2.83
1906 1962 3.814005 ACCTCGTGAGTAACTTGTTGT 57.186 42.857 0.00 0.00 0.00 3.32
1923 1980 7.865530 ACCCACCTGAAATTAAATTTTACCT 57.134 32.000 0.00 0.00 31.47 3.08
1968 2026 2.602676 CCGGGAAGAAGGCCTCCAA 61.603 63.158 5.23 0.00 0.00 3.53
2108 2166 1.658114 CACCTTCCTCGTGACGTGA 59.342 57.895 8.77 2.24 32.77 4.35
2166 2224 2.016393 TTGAGGATGGCGCCGACTAG 62.016 60.000 23.90 0.00 0.00 2.57
2168 2226 3.390521 TTGAGGATGGCGCCGACT 61.391 61.111 23.90 19.48 0.00 4.18
2219 2277 4.161295 CCGAGGAAGATGCGGCCA 62.161 66.667 2.24 0.00 38.46 5.36
2289 2348 0.830648 TGTTATGAAGGCGGAGGGAG 59.169 55.000 0.00 0.00 0.00 4.30
2309 2376 8.346300 TGACTTTTAGAAAAATTATGTGCACGA 58.654 29.630 13.13 0.00 0.00 4.35
2327 2394 9.628746 GTTAAAGTTTGTGAGGTTTGACTTTTA 57.371 29.630 0.00 0.00 38.09 1.52
2500 2570 7.177041 GGAACGGAGGAAGTAGTTCATATAGAT 59.823 40.741 12.31 0.00 43.24 1.98
2501 2571 6.489361 GGAACGGAGGAAGTAGTTCATATAGA 59.511 42.308 12.31 0.00 43.24 1.98
2502 2572 6.490721 AGGAACGGAGGAAGTAGTTCATATAG 59.509 42.308 12.31 3.08 43.24 1.31
2503 2573 6.371278 AGGAACGGAGGAAGTAGTTCATATA 58.629 40.000 12.31 0.00 43.24 0.86
2504 2574 5.209659 AGGAACGGAGGAAGTAGTTCATAT 58.790 41.667 12.31 0.00 43.24 1.78
2505 2575 4.607239 AGGAACGGAGGAAGTAGTTCATA 58.393 43.478 12.31 0.00 43.24 2.15
2506 2576 3.442076 AGGAACGGAGGAAGTAGTTCAT 58.558 45.455 12.31 4.79 43.24 2.57
2507 2577 2.885616 AGGAACGGAGGAAGTAGTTCA 58.114 47.619 12.31 0.00 43.24 3.18
2508 2578 5.397142 TTTAGGAACGGAGGAAGTAGTTC 57.603 43.478 1.31 1.31 41.40 3.01
2515 2585 7.909485 AGACTTATATTTAGGAACGGAGGAA 57.091 36.000 0.00 0.00 0.00 3.36
2517 2587 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
2549 2619 9.566530 CATCCGTATGTTGTATTTCATTTGAAA 57.433 29.630 8.09 8.09 46.60 2.69
2550 2620 8.735315 ACATCCGTATGTTGTATTTCATTTGAA 58.265 29.630 0.00 0.00 44.07 2.69
2551 2621 8.275015 ACATCCGTATGTTGTATTTCATTTGA 57.725 30.769 0.00 0.00 44.07 2.69
2569 2639 9.261180 CTCTCAAATATGTTTACATACATCCGT 57.739 33.333 4.79 0.00 41.15 4.69
2570 2640 9.261180 ACTCTCAAATATGTTTACATACATCCG 57.739 33.333 4.79 0.00 41.15 4.18
2589 2659 8.239314 GCAAAATGAATGAATCTACACTCTCAA 58.761 33.333 0.00 0.00 0.00 3.02
2590 2660 7.609146 AGCAAAATGAATGAATCTACACTCTCA 59.391 33.333 0.00 0.00 0.00 3.27
2591 2661 7.983307 AGCAAAATGAATGAATCTACACTCTC 58.017 34.615 0.00 0.00 0.00 3.20
2592 2662 7.066766 GGAGCAAAATGAATGAATCTACACTCT 59.933 37.037 0.00 0.00 0.00 3.24
2593 2663 7.192232 GGAGCAAAATGAATGAATCTACACTC 58.808 38.462 0.00 0.00 0.00 3.51
2594 2664 6.183360 CGGAGCAAAATGAATGAATCTACACT 60.183 38.462 0.00 0.00 0.00 3.55
2595 2665 5.967674 CGGAGCAAAATGAATGAATCTACAC 59.032 40.000 0.00 0.00 0.00 2.90
2596 2666 5.647658 ACGGAGCAAAATGAATGAATCTACA 59.352 36.000 0.00 0.00 0.00 2.74
2597 2667 6.124088 ACGGAGCAAAATGAATGAATCTAC 57.876 37.500 0.00 0.00 0.00 2.59
2598 2668 7.498900 ACATACGGAGCAAAATGAATGAATCTA 59.501 33.333 0.00 0.00 0.00 1.98
2599 2669 6.319658 ACATACGGAGCAAAATGAATGAATCT 59.680 34.615 0.00 0.00 0.00 2.40
2600 2670 6.498304 ACATACGGAGCAAAATGAATGAATC 58.502 36.000 0.00 0.00 0.00 2.52
2601 2671 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
2602 2672 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
2603 2673 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
2604 2674 6.037062 TGACTACATACGGAGCAAAATGAATG 59.963 38.462 0.00 0.00 0.00 2.67
2605 2675 6.037172 GTGACTACATACGGAGCAAAATGAAT 59.963 38.462 0.00 0.00 0.00 2.57
2606 2676 5.350365 GTGACTACATACGGAGCAAAATGAA 59.650 40.000 0.00 0.00 0.00 2.57
2607 2677 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
2608 2678 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
2609 2679 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
2610 2680 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
2611 2681 4.530710 AAGTGACTACATACGGAGCAAA 57.469 40.909 0.00 0.00 0.00 3.68
2612 2682 4.703575 ACTAAGTGACTACATACGGAGCAA 59.296 41.667 0.00 0.00 0.00 3.91
2613 2683 4.267536 ACTAAGTGACTACATACGGAGCA 58.732 43.478 0.00 0.00 0.00 4.26
2614 2684 4.897025 ACTAAGTGACTACATACGGAGC 57.103 45.455 0.00 0.00 0.00 4.70
2615 2685 7.783090 TTCTACTAAGTGACTACATACGGAG 57.217 40.000 0.00 0.00 0.00 4.63
2616 2686 8.209584 AGATTCTACTAAGTGACTACATACGGA 58.790 37.037 0.00 0.00 0.00 4.69
2617 2687 8.380743 AGATTCTACTAAGTGACTACATACGG 57.619 38.462 0.00 0.00 0.00 4.02
2618 2688 9.263538 AGAGATTCTACTAAGTGACTACATACG 57.736 37.037 0.00 0.00 0.00 3.06
2641 2711 9.250624 CGTTCCCAAATATAAGTCTTTCTAGAG 57.749 37.037 0.00 0.00 0.00 2.43
2646 2716 6.260271 CCTCCGTTCCCAAATATAAGTCTTTC 59.740 42.308 0.00 0.00 0.00 2.62
2648 2718 5.397559 CCCTCCGTTCCCAAATATAAGTCTT 60.398 44.000 0.00 0.00 0.00 3.01
2649 2719 4.102681 CCCTCCGTTCCCAAATATAAGTCT 59.897 45.833 0.00 0.00 0.00 3.24
2650 2720 4.102054 TCCCTCCGTTCCCAAATATAAGTC 59.898 45.833 0.00 0.00 0.00 3.01
2651 2721 4.042174 TCCCTCCGTTCCCAAATATAAGT 58.958 43.478 0.00 0.00 0.00 2.24
2661 2731 1.201424 AATGTACTCCCTCCGTTCCC 58.799 55.000 0.00 0.00 0.00 3.97
2662 2732 3.244112 CCATAATGTACTCCCTCCGTTCC 60.244 52.174 0.00 0.00 0.00 3.62
2663 2733 3.387050 ACCATAATGTACTCCCTCCGTTC 59.613 47.826 0.00 0.00 0.00 3.95
2664 2734 3.381335 ACCATAATGTACTCCCTCCGTT 58.619 45.455 0.00 0.00 0.00 4.44
2666 2736 2.030185 CGACCATAATGTACTCCCTCCG 60.030 54.545 0.00 0.00 0.00 4.63
2674 2744 2.299297 CCTCCCCTCGACCATAATGTAC 59.701 54.545 0.00 0.00 0.00 2.90
2678 2748 0.566176 TCCCTCCCCTCGACCATAAT 59.434 55.000 0.00 0.00 0.00 1.28
2681 2751 1.294426 TACTCCCTCCCCTCGACCAT 61.294 60.000 0.00 0.00 0.00 3.55
2682 2752 1.932231 TACTCCCTCCCCTCGACCA 60.932 63.158 0.00 0.00 0.00 4.02
2683 2753 1.455402 GTACTCCCTCCCCTCGACC 60.455 68.421 0.00 0.00 0.00 4.79
2684 2754 1.455402 GGTACTCCCTCCCCTCGAC 60.455 68.421 0.00 0.00 0.00 4.20
2686 2756 1.757340 GTGGTACTCCCTCCCCTCG 60.757 68.421 0.00 0.00 0.00 4.63
2689 2759 1.382833 GAGGTGGTACTCCCTCCCC 60.383 68.421 16.19 0.00 46.41 4.81
2729 2893 0.607489 ACTGGATGGAGCAAGCACAC 60.607 55.000 0.00 0.00 0.00 3.82
2732 2896 0.401356 TGAACTGGATGGAGCAAGCA 59.599 50.000 0.00 0.00 0.00 3.91
2738 2902 3.801698 ACGATTGATGAACTGGATGGAG 58.198 45.455 0.00 0.00 0.00 3.86
2768 2932 3.250762 CGGACTGCAAAAATCTCACAAGA 59.749 43.478 0.00 0.00 35.54 3.02
2769 2933 3.558505 CGGACTGCAAAAATCTCACAAG 58.441 45.455 0.00 0.00 0.00 3.16
2867 3031 2.033448 GCCACGAACATCCCCACA 59.967 61.111 0.00 0.00 0.00 4.17
2903 3067 1.228831 CCCTGGGATTGTGTTGGCA 60.229 57.895 7.01 0.00 0.00 4.92
2978 3142 2.427245 CGGGATGAAGACGGCTCCT 61.427 63.158 0.00 0.00 0.00 3.69
2981 3145 2.363795 TCCGGGATGAAGACGGCT 60.364 61.111 0.00 0.00 46.78 5.52
3002 3166 1.525995 CAACACGAGGCTGTTGGGT 60.526 57.895 9.54 0.00 44.97 4.51
3083 3247 1.170290 TGTCCTTGAGCTCGACGTCA 61.170 55.000 17.16 2.65 0.00 4.35
3137 3301 2.807895 CGTCGAAACGCACCGGAT 60.808 61.111 9.46 0.00 42.82 4.18
3422 3586 0.747255 CGAAGATCCACGTCATCCCT 59.253 55.000 0.00 0.00 0.00 4.20
3507 3671 1.227823 CCACGAAGAGGCACACCAA 60.228 57.895 0.00 0.00 39.06 3.67
3527 3691 2.669133 CCAGGAGATGCCGAACCCA 61.669 63.158 0.00 0.00 43.43 4.51
3674 3838 2.086869 GAGCCATACTTGAAGCTGCAA 58.913 47.619 7.01 7.01 35.23 4.08
3845 4009 3.700831 TTTGTCGGGTGTGGGCGTT 62.701 57.895 0.00 0.00 0.00 4.84
3852 4016 2.258013 CGGCATGTTTGTCGGGTGT 61.258 57.895 0.00 0.00 46.99 4.16
3896 4060 0.738389 ACAAGTCAAACCACGCCAAG 59.262 50.000 0.00 0.00 0.00 3.61
3897 4061 0.736053 GACAAGTCAAACCACGCCAA 59.264 50.000 0.00 0.00 0.00 4.52
3900 4064 0.307760 CTGGACAAGTCAAACCACGC 59.692 55.000 2.29 0.00 0.00 5.34
3944 4118 4.601084 TGGTGTTGTTACTCCCTCAAAAA 58.399 39.130 0.00 0.00 37.16 1.94
3945 4119 4.237976 TGGTGTTGTTACTCCCTCAAAA 57.762 40.909 0.00 0.00 37.16 2.44
3946 4120 3.935818 TGGTGTTGTTACTCCCTCAAA 57.064 42.857 0.00 0.00 37.16 2.69
3947 4121 3.201266 AGTTGGTGTTGTTACTCCCTCAA 59.799 43.478 0.00 0.00 37.16 3.02
3948 4122 2.775384 AGTTGGTGTTGTTACTCCCTCA 59.225 45.455 0.00 0.00 37.16 3.86
3949 4123 3.071167 AGAGTTGGTGTTGTTACTCCCTC 59.929 47.826 0.00 0.00 38.17 4.30
3950 4124 3.046374 AGAGTTGGTGTTGTTACTCCCT 58.954 45.455 0.00 0.00 38.17 4.20
3951 4125 3.139077 CAGAGTTGGTGTTGTTACTCCC 58.861 50.000 0.00 0.00 38.17 4.30
3952 4126 3.139077 CCAGAGTTGGTGTTGTTACTCC 58.861 50.000 0.00 0.00 39.79 3.85
3967 4141 4.737578 TGTGGAAGTCTAGTAACCAGAGT 58.262 43.478 0.00 0.00 0.00 3.24
3979 4153 4.081087 ACACACTACTTGTTGTGGAAGTCT 60.081 41.667 16.72 0.00 35.67 3.24
3980 4154 4.034048 CACACACTACTTGTTGTGGAAGTC 59.966 45.833 16.72 0.00 35.67 3.01
4000 4174 5.759506 TTTTCTCCTTGAATAAACGCACA 57.240 34.783 0.00 0.00 34.24 4.57
4004 4178 6.959311 CCGTACATTTTCTCCTTGAATAAACG 59.041 38.462 0.00 0.00 34.24 3.60
4005 4179 7.813645 ACCGTACATTTTCTCCTTGAATAAAC 58.186 34.615 0.00 0.00 34.24 2.01
4009 4183 5.585047 GCTACCGTACATTTTCTCCTTGAAT 59.415 40.000 0.00 0.00 34.24 2.57
4012 4186 4.250464 TGCTACCGTACATTTTCTCCTTG 58.750 43.478 0.00 0.00 0.00 3.61
4013 4187 4.546829 TGCTACCGTACATTTTCTCCTT 57.453 40.909 0.00 0.00 0.00 3.36
4014 4188 4.161565 TGATGCTACCGTACATTTTCTCCT 59.838 41.667 0.00 0.00 0.00 3.69
4015 4189 4.439057 TGATGCTACCGTACATTTTCTCC 58.561 43.478 0.00 0.00 0.00 3.71
4018 4192 6.551736 ACAATTGATGCTACCGTACATTTTC 58.448 36.000 13.59 0.00 0.00 2.29
4027 4201 3.440173 ACCTTTGACAATTGATGCTACCG 59.560 43.478 13.59 0.00 0.00 4.02
4028 4202 5.048083 TCAACCTTTGACAATTGATGCTACC 60.048 40.000 13.59 0.00 34.08 3.18
4031 4205 5.475719 CATCAACCTTTGACAATTGATGCT 58.524 37.500 21.34 1.32 46.68 3.79
4032 4206 5.773239 CATCAACCTTTGACAATTGATGC 57.227 39.130 21.34 1.65 46.68 3.91
4034 4208 4.322953 GGCCATCAACCTTTGACAATTGAT 60.323 41.667 13.59 8.91 43.48 2.57
4035 4209 3.006752 GGCCATCAACCTTTGACAATTGA 59.993 43.478 13.59 5.42 43.48 2.57
4036 4210 3.328505 GGCCATCAACCTTTGACAATTG 58.671 45.455 3.24 3.24 43.48 2.32
4037 4211 2.302733 GGGCCATCAACCTTTGACAATT 59.697 45.455 4.39 0.00 43.48 2.32
4038 4212 1.901833 GGGCCATCAACCTTTGACAAT 59.098 47.619 4.39 0.00 43.48 2.71
4062 4236 5.135330 GTCGAAAATAGACCACGTGAAAAC 58.865 41.667 19.30 5.17 32.78 2.43
4068 4242 3.744426 CCTTTGTCGAAAATAGACCACGT 59.256 43.478 0.00 0.00 37.80 4.49
4083 4257 4.567159 CAGCTTCTACCGTATTCCTTTGTC 59.433 45.833 0.00 0.00 0.00 3.18
4085 4259 4.504858 ACAGCTTCTACCGTATTCCTTTG 58.495 43.478 0.00 0.00 0.00 2.77
4088 4262 5.394993 GGTTAACAGCTTCTACCGTATTCCT 60.395 44.000 8.10 0.00 0.00 3.36
4089 4263 4.807834 GGTTAACAGCTTCTACCGTATTCC 59.192 45.833 8.10 0.00 0.00 3.01
4090 4264 5.413499 TGGTTAACAGCTTCTACCGTATTC 58.587 41.667 8.10 0.00 0.00 1.75
4092 4266 5.007385 CTGGTTAACAGCTTCTACCGTAT 57.993 43.478 8.10 0.00 40.97 3.06
4111 4286 9.742144 ACTATACTATGATAAGTACACCTCTGG 57.258 37.037 0.00 0.00 34.87 3.86
4133 4331 5.482526 TGTACCACACCAATACTGTCACTAT 59.517 40.000 0.00 0.00 0.00 2.12
4188 4394 6.238566 CCATGAGGCACAAGTGAAATAGTATG 60.239 42.308 4.04 0.00 0.00 2.39
4191 4397 4.012374 CCATGAGGCACAAGTGAAATAGT 58.988 43.478 4.04 0.00 0.00 2.12
4192 4398 4.012374 ACCATGAGGCACAAGTGAAATAG 58.988 43.478 4.04 0.00 39.06 1.73
4193 4399 4.032960 ACCATGAGGCACAAGTGAAATA 57.967 40.909 4.04 0.00 39.06 1.40
4194 4400 2.880443 ACCATGAGGCACAAGTGAAAT 58.120 42.857 4.04 0.00 39.06 2.17
4199 4407 3.508845 ACTTTACCATGAGGCACAAGT 57.491 42.857 0.00 0.00 39.06 3.16
4215 4423 6.553524 CATGCACATTTGTTTTCCAAACTTT 58.446 32.000 0.00 0.00 45.43 2.66
4223 4431 4.053295 ACTCAGCATGCACATTTGTTTTC 58.947 39.130 21.98 0.00 34.76 2.29
4258 4466 3.256879 TGTGTCCACAAAAGAAACAGCAA 59.743 39.130 0.00 0.00 38.56 3.91
4278 4497 4.697352 GGTAGAATGAGAATGTGCAACTGT 59.303 41.667 0.00 0.00 38.04 3.55
4281 4500 4.009675 TGGGTAGAATGAGAATGTGCAAC 58.990 43.478 0.00 0.00 37.35 4.17
4309 4528 9.403583 GTTTCTTTTATCCACCACCTATGATAA 57.596 33.333 0.00 0.00 0.00 1.75
4320 4571 5.220796 GGCATAGACGTTTCTTTTATCCACC 60.221 44.000 0.00 0.00 32.75 4.61
4335 4586 4.979197 GTGATAGAGACTTTGGCATAGACG 59.021 45.833 12.05 0.00 0.00 4.18
4340 4596 3.881688 GCATGTGATAGAGACTTTGGCAT 59.118 43.478 0.00 0.00 0.00 4.40
4343 4599 6.037610 GGTTTAGCATGTGATAGAGACTTTGG 59.962 42.308 0.00 0.00 0.00 3.28
4354 4610 8.752187 ACTTCATTTAATGGTTTAGCATGTGAT 58.248 29.630 5.02 0.00 0.00 3.06
4362 4618 9.696917 AGAAAGCAACTTCATTTAATGGTTTAG 57.303 29.630 5.02 1.43 40.53 1.85
4372 4628 6.363357 GCGTGAATTAGAAAGCAACTTCATTT 59.637 34.615 0.00 0.00 0.00 2.32
4373 4629 5.858581 GCGTGAATTAGAAAGCAACTTCATT 59.141 36.000 0.00 0.00 0.00 2.57
4376 4632 4.783242 TGCGTGAATTAGAAAGCAACTTC 58.217 39.130 0.00 0.00 0.00 3.01
4383 4639 1.529826 GCGCCTGCGTGAATTAGAAAG 60.530 52.381 13.57 0.00 42.09 2.62
4430 4686 1.805945 GGCCGCTAACACACGAGAG 60.806 63.158 0.00 0.00 0.00 3.20
4445 4701 2.162681 GATATGGGTTGCACATAGGCC 58.837 52.381 0.00 0.00 34.59 5.19
4479 8536 3.248024 AGGTCCCACAATGACAAGAGTA 58.752 45.455 0.00 0.00 34.36 2.59
4480 8537 2.039084 GAGGTCCCACAATGACAAGAGT 59.961 50.000 0.00 0.00 34.36 3.24
4481 8538 2.616510 GGAGGTCCCACAATGACAAGAG 60.617 54.545 0.00 0.00 34.36 2.85
4486 8543 3.933861 ATTAGGAGGTCCCACAATGAC 57.066 47.619 0.00 0.00 37.41 3.06
4516 8573 4.959596 GCTCGGCCTCCATCGCTC 62.960 72.222 0.00 0.00 0.00 5.03
4518 8575 4.838152 TTGCTCGGCCTCCATCGC 62.838 66.667 0.00 0.00 0.00 4.58
4523 8580 0.960364 TGTTCATTTGCTCGGCCTCC 60.960 55.000 0.00 0.00 0.00 4.30
4551 8608 2.753043 GGTGGGCAGCCACATCAG 60.753 66.667 15.19 0.00 41.97 2.90
4552 8609 3.259314 AGGTGGGCAGCCACATCA 61.259 61.111 15.19 0.00 41.97 3.07
4589 8646 4.636435 AACCCCGAACCGGCAGTG 62.636 66.667 0.00 0.00 46.86 3.66
4621 8678 9.836864 AAGCAAAAACAGAAAAAGGATAGAAAT 57.163 25.926 0.00 0.00 0.00 2.17
4627 8684 8.565896 AAGAAAAGCAAAAACAGAAAAAGGAT 57.434 26.923 0.00 0.00 0.00 3.24
4653 8710 7.972623 TTCGAATTTCAAGTTTTCGCTAAAA 57.027 28.000 0.00 0.00 41.38 1.52
4742 8799 5.634439 TGCGAACAATTTTCAGAATTCATGG 59.366 36.000 8.44 0.00 0.00 3.66
4758 8815 7.593273 ACGAATATTTTTCAGAATTGCGAACAA 59.407 29.630 0.00 0.00 40.87 2.83
4759 8816 7.060518 CACGAATATTTTTCAGAATTGCGAACA 59.939 33.333 0.00 0.00 0.00 3.18
4760 8817 7.270365 TCACGAATATTTTTCAGAATTGCGAAC 59.730 33.333 0.00 0.00 0.00 3.95
4761 8818 7.301789 TCACGAATATTTTTCAGAATTGCGAA 58.698 30.769 0.00 0.00 0.00 4.70
4762 8819 6.836953 TCACGAATATTTTTCAGAATTGCGA 58.163 32.000 0.00 0.00 0.00 5.10
4763 8820 6.742718 ACTCACGAATATTTTTCAGAATTGCG 59.257 34.615 0.00 0.00 0.00 4.85
4764 8821 8.452989 AACTCACGAATATTTTTCAGAATTGC 57.547 30.769 0.00 0.00 0.00 3.56
4765 8822 9.611284 TGAACTCACGAATATTTTTCAGAATTG 57.389 29.630 0.00 0.00 0.00 2.32
4771 8828 9.796120 AGTTTTTGAACTCACGAATATTTTTCA 57.204 25.926 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.