Multiple sequence alignment - TraesCS1D01G064000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G064000 chr1D 100.000 3423 0 0 1 3423 44643879 44640457 0.000000e+00 6322.0
1 TraesCS1D01G064000 chr1A 90.484 1156 60 17 1619 2747 44407382 44406250 0.000000e+00 1480.0
2 TraesCS1D01G064000 chr1A 87.653 899 68 22 455 1321 44408488 44407601 0.000000e+00 1005.0
3 TraesCS1D01G064000 chr1A 82.391 460 35 24 20 454 44408964 44408526 3.250000e-95 359.0
4 TraesCS1D01G064000 chr1A 87.111 225 24 2 2950 3171 44406513 44406291 2.040000e-62 250.0
5 TraesCS1D01G064000 chr1A 92.683 164 10 2 2753 2916 44406186 44406025 5.710000e-58 235.0
6 TraesCS1D01G064000 chr1A 91.200 125 11 0 1621 1745 33807019 33807143 1.630000e-38 171.0
7 TraesCS1D01G064000 chr1B 89.298 1140 86 25 474 1588 63961077 63959949 0.000000e+00 1397.0
8 TraesCS1D01G064000 chr1B 89.727 915 43 27 1986 2871 63959463 63958571 0.000000e+00 1122.0
9 TraesCS1D01G064000 chr1B 94.150 359 16 3 1586 1941 63959821 63959465 3.000000e-150 542.0
10 TraesCS1D01G064000 chr1B 87.500 240 21 6 2950 3184 63958956 63958721 5.630000e-68 268.0
11 TraesCS1D01G064000 chr1B 96.970 33 1 0 2884 2916 63958572 63958540 4.770000e-04 56.5
12 TraesCS1D01G064000 chr3B 89.086 1017 72 16 1923 2914 391873778 391872776 0.000000e+00 1227.0
13 TraesCS1D01G064000 chr3B 86.667 240 24 4 2947 3180 391873216 391872979 3.390000e-65 259.0
14 TraesCS1D01G064000 chr3A 88.954 1023 67 18 1923 2914 391489859 391490866 0.000000e+00 1221.0
15 TraesCS1D01G064000 chr3A 86.864 236 25 2 2950 3180 391490429 391490663 3.390000e-65 259.0
16 TraesCS1D01G064000 chr3A 90.400 125 12 0 1621 1745 569854795 569854671 7.600000e-37 165.0
17 TraesCS1D01G064000 chr3D 88.932 1021 70 13 1923 2914 297466412 297465406 0.000000e+00 1219.0
18 TraesCS1D01G064000 chr3D 87.288 236 24 2 2950 3180 297465843 297465609 7.280000e-67 265.0
19 TraesCS1D01G064000 chr2A 92.913 127 9 0 1621 1747 728719008 728719134 5.830000e-43 185.0
20 TraesCS1D01G064000 chr6B 92.126 127 10 0 1621 1747 506170246 506170372 2.710000e-41 180.0
21 TraesCS1D01G064000 chr4A 92.126 127 10 0 1621 1747 735512138 735512264 2.710000e-41 180.0
22 TraesCS1D01G064000 chr7A 91.200 125 11 0 1621 1745 718415660 718415784 1.630000e-38 171.0
23 TraesCS1D01G064000 chr2B 90.551 127 12 0 1621 1747 19185441 19185315 5.870000e-38 169.0
24 TraesCS1D01G064000 chr2D 100.000 28 0 0 1187 1214 548509886 548509913 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G064000 chr1D 44640457 44643879 3422 True 6322.0 6322 100.0000 1 3423 1 chr1D.!!$R1 3422
1 TraesCS1D01G064000 chr1A 44406025 44408964 2939 True 665.8 1480 88.0644 20 3171 5 chr1A.!!$R1 3151
2 TraesCS1D01G064000 chr1B 63958540 63961077 2537 True 677.1 1397 91.5290 474 3184 5 chr1B.!!$R1 2710
3 TraesCS1D01G064000 chr3B 391872776 391873778 1002 True 743.0 1227 87.8765 1923 3180 2 chr3B.!!$R1 1257
4 TraesCS1D01G064000 chr3A 391489859 391490866 1007 False 740.0 1221 87.9090 1923 3180 2 chr3A.!!$F1 1257
5 TraesCS1D01G064000 chr3D 297465406 297466412 1006 True 742.0 1219 88.1100 1923 3180 2 chr3D.!!$R1 1257

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
880 965 0.032017 TAGAAGCACTCCCTCCCTCC 60.032 60.0 0.0 0.0 0.0 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2701 3193 0.112995 ACCAGCAAGATGGGAGCAAA 59.887 50.0 9.4 0.0 45.25 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.428413 AACCAGGCGTTATAACCAAGT 57.572 42.857 10.01 0.00 30.96 3.16
22 23 4.556592 AACCAGGCGTTATAACCAAGTA 57.443 40.909 10.01 0.00 30.96 2.24
23 24 4.765813 ACCAGGCGTTATAACCAAGTAT 57.234 40.909 10.01 0.00 0.00 2.12
24 25 5.874897 ACCAGGCGTTATAACCAAGTATA 57.125 39.130 10.01 0.00 0.00 1.47
25 26 6.237887 ACCAGGCGTTATAACCAAGTATAA 57.762 37.500 10.01 0.00 0.00 0.98
26 27 6.051074 ACCAGGCGTTATAACCAAGTATAAC 58.949 40.000 10.01 5.42 40.94 1.89
27 28 5.467735 CCAGGCGTTATAACCAAGTATAACC 59.532 44.000 10.01 0.00 41.14 2.85
28 29 5.176223 CAGGCGTTATAACCAAGTATAACCG 59.824 44.000 10.01 0.00 41.14 4.44
36 37 2.235898 ACCAAGTATAACCGGGCGTTAA 59.764 45.455 6.32 0.00 40.32 2.01
47 48 1.400500 CGGGCGTTAACATCACCAAAC 60.400 52.381 6.39 0.00 0.00 2.93
51 52 3.243267 GGCGTTAACATCACCAAACAACT 60.243 43.478 6.39 0.00 0.00 3.16
72 73 1.401931 CCGAGAAGCCACATTTTGCTG 60.402 52.381 0.00 0.00 38.00 4.41
101 102 9.519191 TTCCATTATCATAATCACCAACATAGG 57.481 33.333 0.00 0.00 0.00 2.57
106 107 5.704354 TCATAATCACCAACATAGGCCAAT 58.296 37.500 5.01 0.00 0.00 3.16
125 126 4.497340 CCAATACATACAACCATCAACCGC 60.497 45.833 0.00 0.00 0.00 5.68
139 140 3.514362 CCGCCAATACAACCGGGC 61.514 66.667 6.32 0.00 42.98 6.13
141 142 4.187810 GCCAATACAACCGGGCGC 62.188 66.667 6.32 0.00 36.58 6.53
153 162 1.522806 CGGGCGCTGCTAACCATTA 60.523 57.895 7.64 0.00 0.00 1.90
154 163 0.884704 CGGGCGCTGCTAACCATTAT 60.885 55.000 7.64 0.00 0.00 1.28
165 174 6.016777 GCTGCTAACCATTATCATGCTAACTT 60.017 38.462 0.00 0.00 0.00 2.66
166 175 7.173218 GCTGCTAACCATTATCATGCTAACTTA 59.827 37.037 0.00 0.00 0.00 2.24
167 176 8.378172 TGCTAACCATTATCATGCTAACTTAC 57.622 34.615 0.00 0.00 0.00 2.34
184 193 4.620982 ACTTACAAGCAAAATGTGGCTTC 58.379 39.130 0.00 0.00 46.82 3.86
186 195 3.756933 ACAAGCAAAATGTGGCTTCAT 57.243 38.095 0.00 0.00 46.82 2.57
187 196 3.656559 ACAAGCAAAATGTGGCTTCATC 58.343 40.909 0.00 0.00 46.82 2.92
188 197 3.322828 ACAAGCAAAATGTGGCTTCATCT 59.677 39.130 0.00 0.00 46.82 2.90
190 199 4.184079 AGCAAAATGTGGCTTCATCTTC 57.816 40.909 0.00 0.00 36.92 2.87
191 200 3.830755 AGCAAAATGTGGCTTCATCTTCT 59.169 39.130 0.00 0.00 36.92 2.85
192 201 3.924686 GCAAAATGTGGCTTCATCTTCTG 59.075 43.478 0.00 0.00 0.00 3.02
193 202 4.321452 GCAAAATGTGGCTTCATCTTCTGA 60.321 41.667 0.00 0.00 0.00 3.27
194 203 5.775686 CAAAATGTGGCTTCATCTTCTGAA 58.224 37.500 0.00 0.00 41.61 3.02
195 204 6.395629 CAAAATGTGGCTTCATCTTCTGAAT 58.604 36.000 0.00 0.00 42.87 2.57
196 205 7.541162 CAAAATGTGGCTTCATCTTCTGAATA 58.459 34.615 0.00 0.00 42.87 1.75
197 206 7.707624 AAATGTGGCTTCATCTTCTGAATAA 57.292 32.000 0.00 0.00 42.87 1.40
225 234 9.511272 TTTGGAAGACTTAAGGTTAGGTTAATC 57.489 33.333 7.53 0.00 0.00 1.75
235 247 5.278061 AGGTTAGGTTAATCTGGCTACTGA 58.722 41.667 0.00 0.00 0.00 3.41
240 252 5.983540 AGGTTAATCTGGCTACTGAAGAAG 58.016 41.667 0.00 0.00 0.00 2.85
263 275 4.084013 GGCTCGTTTTCTTCAAATCTCGAA 60.084 41.667 0.00 0.00 0.00 3.71
266 278 6.031833 GCTCGTTTTCTTCAAATCTCGAATTG 59.968 38.462 0.00 0.00 0.00 2.32
274 286 9.658799 TTCTTCAAATCTCGAATTGAGTAAGAT 57.341 29.630 7.68 0.00 45.46 2.40
284 296 8.912787 TCGAATTGAGTAAGATTAGTGAGTTC 57.087 34.615 0.00 0.00 0.00 3.01
322 334 3.804873 GCTATGTAAACCTAGAGTGCAGC 59.195 47.826 0.00 0.00 0.00 5.25
331 343 2.625314 CCTAGAGTGCAGCAGCTATGTA 59.375 50.000 1.76 0.00 42.74 2.29
332 344 3.068732 CCTAGAGTGCAGCAGCTATGTAA 59.931 47.826 1.76 0.00 42.74 2.41
333 345 3.834489 AGAGTGCAGCAGCTATGTAAT 57.166 42.857 1.76 0.00 42.74 1.89
334 346 3.464907 AGAGTGCAGCAGCTATGTAATG 58.535 45.455 1.76 0.00 42.74 1.90
335 347 1.945394 AGTGCAGCAGCTATGTAATGC 59.055 47.619 1.76 0.00 42.74 3.56
393 414 8.421002 GGATACAATGCTAAATGGGTGTTAAAT 58.579 33.333 0.00 0.00 0.00 1.40
440 461 7.830697 ACAATCATGTCATCAAAACTAGGATCA 59.169 33.333 0.00 0.00 33.41 2.92
460 523 8.717717 AGGATCATCCTTGTAGTTTTATCATGA 58.282 33.333 0.00 0.00 46.91 3.07
488 551 0.179121 TAACATGTGGGTAGCGAGCG 60.179 55.000 0.00 0.00 0.00 5.03
503 566 0.239347 GAGCGCATAATGCATCCCAC 59.761 55.000 11.47 0.00 45.36 4.61
505 568 1.575922 CGCATAATGCATCCCACCG 59.424 57.895 0.00 0.00 45.36 4.94
521 584 2.278404 CGGGAATGGCATTGGGGA 59.722 61.111 19.07 0.00 0.00 4.81
529 592 2.316586 GGCATTGGGGAGGAAGGGA 61.317 63.158 0.00 0.00 0.00 4.20
604 672 4.155733 CCCCGGCGTAGATGTGCA 62.156 66.667 6.01 0.00 0.00 4.57
673 744 4.766970 CTCGATGATGTGGAGCCC 57.233 61.111 0.00 0.00 0.00 5.19
680 751 3.628646 GATGTGGAGCCCGGTTGCT 62.629 63.158 4.74 4.74 46.37 3.91
722 799 0.620700 GTAGCTGGGGAAGGAAGGGA 60.621 60.000 0.00 0.00 0.00 4.20
747 824 0.461548 TTGGCAGTAGATCTGGAGCG 59.538 55.000 5.18 0.00 43.78 5.03
807 892 1.228521 TGGTGGGTGATTGTGGCTG 60.229 57.895 0.00 0.00 0.00 4.85
875 960 2.698855 TTGCATAGAAGCACTCCCTC 57.301 50.000 0.00 0.00 45.61 4.30
877 962 0.107643 GCATAGAAGCACTCCCTCCC 59.892 60.000 0.00 0.00 0.00 4.30
879 964 1.691434 CATAGAAGCACTCCCTCCCTC 59.309 57.143 0.00 0.00 0.00 4.30
880 965 0.032017 TAGAAGCACTCCCTCCCTCC 60.032 60.000 0.00 0.00 0.00 4.30
881 966 2.285743 AAGCACTCCCTCCCTCCC 60.286 66.667 0.00 0.00 0.00 4.30
883 968 2.766229 GCACTCCCTCCCTCCCTC 60.766 72.222 0.00 0.00 0.00 4.30
884 969 2.780693 CACTCCCTCCCTCCCTCA 59.219 66.667 0.00 0.00 0.00 3.86
885 970 1.316266 CACTCCCTCCCTCCCTCAT 59.684 63.158 0.00 0.00 0.00 2.90
887 972 0.423544 ACTCCCTCCCTCCCTCATTT 59.576 55.000 0.00 0.00 0.00 2.32
889 974 0.725133 TCCCTCCCTCCCTCATTTCT 59.275 55.000 0.00 0.00 0.00 2.52
890 975 0.842635 CCCTCCCTCCCTCATTTCTG 59.157 60.000 0.00 0.00 0.00 3.02
894 979 3.107601 CTCCCTCCCTCATTTCTGTACA 58.892 50.000 0.00 0.00 0.00 2.90
898 983 4.901849 CCCTCCCTCATTTCTGTACAGATA 59.098 45.833 25.68 21.04 37.29 1.98
928 1013 3.837213 CAATCTGTGCCGTTCATCTTT 57.163 42.857 0.00 0.00 0.00 2.52
934 1019 3.013921 TGTGCCGTTCATCTTTAATCCC 58.986 45.455 0.00 0.00 0.00 3.85
1157 1250 1.228552 GGTGCTTCTTCTTGCCCCA 60.229 57.895 0.00 0.00 0.00 4.96
1219 1314 0.040603 GTTGTGTGCTCTCTTGCAGC 60.041 55.000 0.00 0.00 44.20 5.25
1349 1447 0.319900 CCCTCGGCTATGGATGAACG 60.320 60.000 0.00 0.00 0.00 3.95
1353 1451 1.202486 TCGGCTATGGATGAACGGAAC 60.202 52.381 0.00 0.00 0.00 3.62
1354 1452 1.202533 CGGCTATGGATGAACGGAACT 60.203 52.381 0.00 0.00 0.00 3.01
1355 1453 2.213499 GGCTATGGATGAACGGAACTG 58.787 52.381 0.00 0.00 0.00 3.16
1383 1650 0.598419 GTTGCCTGCCTTTTGTGCTC 60.598 55.000 0.00 0.00 0.00 4.26
1385 1652 2.256461 CCTGCCTTTTGTGCTCGC 59.744 61.111 0.00 0.00 0.00 5.03
1389 1664 2.252260 CCTTTTGTGCTCGCGGTG 59.748 61.111 6.13 0.07 0.00 4.94
1390 1665 2.542907 CCTTTTGTGCTCGCGGTGT 61.543 57.895 6.13 0.00 0.00 4.16
1410 1685 6.588373 CGGTGTTTAGGTTAATGAAAATTGGG 59.412 38.462 0.00 0.00 0.00 4.12
1415 1690 5.598416 AGGTTAATGAAAATTGGGCTAGC 57.402 39.130 6.04 6.04 0.00 3.42
1419 1694 7.565029 AGGTTAATGAAAATTGGGCTAGCTAAT 59.435 33.333 15.72 12.66 0.00 1.73
1449 1724 2.159934 GCGATTCTGCAAATGTTTGTGC 60.160 45.455 7.26 0.00 40.24 4.57
1502 1777 6.095440 GCTGCTTCAAATATCTACTTTGGGAA 59.905 38.462 0.00 0.00 34.95 3.97
1532 1807 7.779326 GGGAGTAGTTAACTGATTACTAGGACT 59.221 40.741 18.56 9.01 39.07 3.85
1533 1808 8.839343 GGAGTAGTTAACTGATTACTAGGACTC 58.161 40.741 18.56 16.40 39.07 3.36
1596 2002 2.540265 ACACAGAGAAGCTTGTGAGG 57.460 50.000 20.35 4.11 36.28 3.86
1645 2051 0.392998 ATGCACCGGTTCAGATCACC 60.393 55.000 13.53 0.00 0.00 4.02
1654 2060 4.503910 CGGTTCAGATCACCTGTTGAATA 58.496 43.478 0.00 0.00 43.38 1.75
1750 2156 7.387948 TCTTTCAGTCTTGTACTTTTAGGCATC 59.612 37.037 0.00 0.00 35.76 3.91
1753 2159 6.874134 TCAGTCTTGTACTTTTAGGCATCTTC 59.126 38.462 0.00 0.00 35.76 2.87
1771 2177 0.395586 TCATTATGCAGCCCCCACAC 60.396 55.000 0.00 0.00 0.00 3.82
1839 2248 3.586470 TTGAACTGGGTAGGCTGAAAA 57.414 42.857 0.00 0.00 0.00 2.29
1943 2395 9.850628 CACTTTGAAATTGAATCATCATACTGT 57.149 29.630 0.00 0.00 34.96 3.55
1982 2434 8.081633 TGTCTAGAATGGCTTTAAAACAACATG 58.918 33.333 0.00 0.00 0.00 3.21
2147 2599 7.305993 CGTTTTTCTTCAGGTAAATTGTTCAGC 60.306 37.037 0.00 0.00 0.00 4.26
2434 2889 4.217118 ACTGAAGACTGATTTGGAATGTGC 59.783 41.667 0.00 0.00 0.00 4.57
2451 2911 3.728474 CGAAGCCAGGCATGCTAG 58.272 61.111 18.92 10.24 38.34 3.42
2511 2987 6.757010 ACCTTGTAGACTGCTTATATTGAACG 59.243 38.462 0.00 0.00 0.00 3.95
2512 2988 6.978659 CCTTGTAGACTGCTTATATTGAACGA 59.021 38.462 0.00 0.00 0.00 3.85
2585 3067 5.290400 CACTCAATAGTATCACAGTGCACAG 59.710 44.000 21.04 14.44 33.48 3.66
2668 3150 2.427506 CTGGAAGTTCCTGGCACTAAC 58.572 52.381 22.41 0.00 37.46 2.34
2707 3199 9.265901 ACACTATATACACATCATTCTTTGCTC 57.734 33.333 0.00 0.00 0.00 4.26
2708 3200 8.715998 CACTATATACACATCATTCTTTGCTCC 58.284 37.037 0.00 0.00 0.00 4.70
2709 3201 7.880195 ACTATATACACATCATTCTTTGCTCCC 59.120 37.037 0.00 0.00 0.00 4.30
2710 3202 3.159213 ACACATCATTCTTTGCTCCCA 57.841 42.857 0.00 0.00 0.00 4.37
2711 3203 3.705051 ACACATCATTCTTTGCTCCCAT 58.295 40.909 0.00 0.00 0.00 4.00
2712 3204 3.698040 ACACATCATTCTTTGCTCCCATC 59.302 43.478 0.00 0.00 0.00 3.51
2713 3205 3.952323 CACATCATTCTTTGCTCCCATCT 59.048 43.478 0.00 0.00 0.00 2.90
2714 3206 4.401519 CACATCATTCTTTGCTCCCATCTT 59.598 41.667 0.00 0.00 0.00 2.40
2715 3207 4.401519 ACATCATTCTTTGCTCCCATCTTG 59.598 41.667 0.00 0.00 0.00 3.02
2716 3208 2.756760 TCATTCTTTGCTCCCATCTTGC 59.243 45.455 0.00 0.00 0.00 4.01
2719 3211 0.815734 CTTTGCTCCCATCTTGCTGG 59.184 55.000 0.00 0.00 35.95 4.85
2721 3213 0.112995 TTGCTCCCATCTTGCTGGTT 59.887 50.000 0.00 0.00 34.23 3.67
2744 3236 4.849813 TCTTGATTGTCTGGGACATCAT 57.150 40.909 1.10 0.00 42.40 2.45
2874 3448 2.407090 CTTCAAGTGCGATGTCTGTCA 58.593 47.619 0.00 0.00 0.00 3.58
2916 3490 0.040351 TGCTACCTCTGCTGGAGACT 59.960 55.000 8.46 0.00 44.45 3.24
2917 3491 0.459489 GCTACCTCTGCTGGAGACTG 59.541 60.000 8.46 0.00 44.45 3.51
2932 3506 6.624352 TGGAGACTGCTTATATTTCAATGC 57.376 37.500 0.00 0.00 0.00 3.56
2933 3507 6.121590 TGGAGACTGCTTATATTTCAATGCA 58.878 36.000 0.00 0.00 0.00 3.96
2934 3508 6.038603 TGGAGACTGCTTATATTTCAATGCAC 59.961 38.462 0.00 0.00 0.00 4.57
2935 3509 6.038603 GGAGACTGCTTATATTTCAATGCACA 59.961 38.462 0.00 0.00 0.00 4.57
2936 3510 7.395190 AGACTGCTTATATTTCAATGCACAA 57.605 32.000 0.00 0.00 0.00 3.33
2937 3511 7.829725 AGACTGCTTATATTTCAATGCACAAA 58.170 30.769 0.00 0.00 0.00 2.83
2938 3512 8.472413 AGACTGCTTATATTTCAATGCACAAAT 58.528 29.630 0.00 0.00 0.00 2.32
2939 3513 9.734620 GACTGCTTATATTTCAATGCACAAATA 57.265 29.630 8.87 8.87 0.00 1.40
2940 3514 9.520204 ACTGCTTATATTTCAATGCACAAATAC 57.480 29.630 8.69 0.53 29.36 1.89
2941 3515 9.740239 CTGCTTATATTTCAATGCACAAATACT 57.260 29.630 8.69 3.78 29.36 2.12
2948 3522 8.970691 ATTTCAATGCACAAATACTTGTAGAC 57.029 30.769 0.00 0.00 44.15 2.59
2949 3523 7.744087 TTCAATGCACAAATACTTGTAGACT 57.256 32.000 0.00 0.00 44.15 3.24
2950 3524 7.132694 TCAATGCACAAATACTTGTAGACTG 57.867 36.000 0.00 0.00 44.15 3.51
2951 3525 6.934083 TCAATGCACAAATACTTGTAGACTGA 59.066 34.615 0.00 0.00 44.15 3.41
2952 3526 7.607607 TCAATGCACAAATACTTGTAGACTGAT 59.392 33.333 0.00 0.00 44.15 2.90
2953 3527 7.928307 ATGCACAAATACTTGTAGACTGATT 57.072 32.000 0.00 0.00 44.15 2.57
2954 3528 9.448438 AATGCACAAATACTTGTAGACTGATTA 57.552 29.630 0.00 0.00 44.15 1.75
2955 3529 9.618890 ATGCACAAATACTTGTAGACTGATTAT 57.381 29.630 0.00 0.00 44.15 1.28
2956 3530 9.448438 TGCACAAATACTTGTAGACTGATTATT 57.552 29.630 0.00 0.00 44.15 1.40
2965 3539 9.003658 ACTTGTAGACTGATTATTTGAACCTTG 57.996 33.333 0.00 0.00 0.00 3.61
2966 3540 8.918202 TTGTAGACTGATTATTTGAACCTTGT 57.082 30.769 0.00 0.00 0.00 3.16
2968 3542 9.653287 TGTAGACTGATTATTTGAACCTTGTAG 57.347 33.333 0.00 0.00 0.00 2.74
2969 3543 9.871238 GTAGACTGATTATTTGAACCTTGTAGA 57.129 33.333 0.00 0.00 0.00 2.59
2970 3544 8.779354 AGACTGATTATTTGAACCTTGTAGAC 57.221 34.615 0.00 0.00 0.00 2.59
2971 3545 8.598041 AGACTGATTATTTGAACCTTGTAGACT 58.402 33.333 0.00 0.00 0.00 3.24
2972 3546 8.553459 ACTGATTATTTGAACCTTGTAGACTG 57.447 34.615 0.00 0.00 0.00 3.51
2973 3547 7.119846 ACTGATTATTTGAACCTTGTAGACTGC 59.880 37.037 0.00 0.00 0.00 4.40
2974 3548 7.168219 TGATTATTTGAACCTTGTAGACTGCT 58.832 34.615 0.00 0.00 0.00 4.24
2975 3549 7.665559 TGATTATTTGAACCTTGTAGACTGCTT 59.334 33.333 0.00 0.00 0.00 3.91
2976 3550 9.162764 GATTATTTGAACCTTGTAGACTGCTTA 57.837 33.333 0.00 0.00 0.00 3.09
2977 3551 9.686683 ATTATTTGAACCTTGTAGACTGCTTAT 57.313 29.630 0.00 0.00 0.00 1.73
2980 3554 9.686683 ATTTGAACCTTGTAGACTGCTTATATT 57.313 29.630 0.00 0.00 0.00 1.28
2981 3555 8.492673 TTGAACCTTGTAGACTGCTTATATTG 57.507 34.615 0.00 0.00 0.00 1.90
2982 3556 7.847096 TGAACCTTGTAGACTGCTTATATTGA 58.153 34.615 0.00 0.00 0.00 2.57
2983 3557 8.318412 TGAACCTTGTAGACTGCTTATATTGAA 58.682 33.333 0.00 0.00 0.00 2.69
2984 3558 8.494016 AACCTTGTAGACTGCTTATATTGAAC 57.506 34.615 0.00 0.00 0.00 3.18
2985 3559 7.620880 ACCTTGTAGACTGCTTATATTGAACA 58.379 34.615 0.00 0.00 0.00 3.18
2986 3560 8.267894 ACCTTGTAGACTGCTTATATTGAACAT 58.732 33.333 0.00 0.00 0.00 2.71
2987 3561 9.113838 CCTTGTAGACTGCTTATATTGAACATT 57.886 33.333 0.00 0.00 0.00 2.71
2995 3569 9.520204 ACTGCTTATATTGAACATTATTTGTGC 57.480 29.630 0.00 0.00 38.99 4.57
2996 3570 9.518906 CTGCTTATATTGAACATTATTTGTGCA 57.481 29.630 0.00 0.00 42.48 4.57
3006 3580 8.871862 TGAACATTATTTGTGCATTCAAATAGC 58.128 29.630 17.16 9.86 45.05 2.97
3007 3581 9.090692 GAACATTATTTGTGCATTCAAATAGCT 57.909 29.630 17.16 9.95 45.05 3.32
3008 3582 9.439500 AACATTATTTGTGCATTCAAATAGCTT 57.561 25.926 17.16 10.31 45.05 3.74
3012 3586 9.787532 TTATTTGTGCATTCAAATAGCTTACTC 57.212 29.630 17.16 0.00 45.05 2.59
3013 3587 6.816134 TTGTGCATTCAAATAGCTTACTCA 57.184 33.333 0.00 0.00 0.00 3.41
3014 3588 6.426980 TGTGCATTCAAATAGCTTACTCAG 57.573 37.500 0.00 0.00 0.00 3.35
3015 3589 5.939883 TGTGCATTCAAATAGCTTACTCAGT 59.060 36.000 0.00 0.00 0.00 3.41
3016 3590 6.430925 TGTGCATTCAAATAGCTTACTCAGTT 59.569 34.615 0.00 0.00 0.00 3.16
3017 3591 6.963805 GTGCATTCAAATAGCTTACTCAGTTC 59.036 38.462 0.00 0.00 0.00 3.01
3018 3592 6.654582 TGCATTCAAATAGCTTACTCAGTTCA 59.345 34.615 0.00 0.00 0.00 3.18
3019 3593 7.337689 TGCATTCAAATAGCTTACTCAGTTCAT 59.662 33.333 0.00 0.00 0.00 2.57
3020 3594 8.830580 GCATTCAAATAGCTTACTCAGTTCATA 58.169 33.333 0.00 0.00 0.00 2.15
3023 3597 9.944376 TTCAAATAGCTTACTCAGTTCATAACT 57.056 29.630 0.00 0.00 44.06 2.24
3039 3613 9.319143 AGTTCATAACTGAGTTTATATGCACTC 57.681 33.333 1.97 8.52 41.01 3.51
3040 3614 9.098355 GTTCATAACTGAGTTTATATGCACTCA 57.902 33.333 1.97 14.77 45.77 3.41
3041 3615 9.665719 TTCATAACTGAGTTTATATGCACTCAA 57.334 29.630 1.97 6.09 46.86 3.02
3042 3616 9.665719 TCATAACTGAGTTTATATGCACTCAAA 57.334 29.630 1.97 8.21 46.86 2.69
3045 3619 7.325660 ACTGAGTTTATATGCACTCAAATGG 57.674 36.000 15.81 9.39 46.86 3.16
3046 3620 6.886459 ACTGAGTTTATATGCACTCAAATGGT 59.114 34.615 15.81 9.85 46.86 3.55
3047 3621 8.046708 ACTGAGTTTATATGCACTCAAATGGTA 58.953 33.333 15.81 0.00 46.86 3.25
3048 3622 8.978874 TGAGTTTATATGCACTCAAATGGTAT 57.021 30.769 13.70 0.00 45.14 2.73
3049 3623 9.056005 TGAGTTTATATGCACTCAAATGGTATC 57.944 33.333 13.70 0.00 45.14 2.24
3050 3624 8.978874 AGTTTATATGCACTCAAATGGTATCA 57.021 30.769 0.00 0.00 0.00 2.15
3051 3625 8.840321 AGTTTATATGCACTCAAATGGTATCAC 58.160 33.333 0.00 0.00 0.00 3.06
3052 3626 8.620416 GTTTATATGCACTCAAATGGTATCACA 58.380 33.333 0.00 0.00 0.00 3.58
3053 3627 6.872628 ATATGCACTCAAATGGTATCACAG 57.127 37.500 0.00 0.00 0.00 3.66
3054 3628 4.019792 TGCACTCAAATGGTATCACAGT 57.980 40.909 0.00 0.00 0.00 3.55
3055 3629 4.397420 TGCACTCAAATGGTATCACAGTT 58.603 39.130 0.00 0.00 0.00 3.16
3056 3630 4.455533 TGCACTCAAATGGTATCACAGTTC 59.544 41.667 0.00 0.00 0.00 3.01
3057 3631 4.455533 GCACTCAAATGGTATCACAGTTCA 59.544 41.667 0.00 0.00 0.00 3.18
3058 3632 5.617751 GCACTCAAATGGTATCACAGTTCAC 60.618 44.000 0.00 0.00 0.00 3.18
3059 3633 5.469760 CACTCAAATGGTATCACAGTTCACA 59.530 40.000 0.00 0.00 0.00 3.58
3060 3634 6.017192 CACTCAAATGGTATCACAGTTCACAA 60.017 38.462 0.00 0.00 0.00 3.33
3061 3635 6.716628 ACTCAAATGGTATCACAGTTCACAAT 59.283 34.615 0.00 0.00 0.00 2.71
3062 3636 7.882791 ACTCAAATGGTATCACAGTTCACAATA 59.117 33.333 0.00 0.00 0.00 1.90
3063 3637 8.267620 TCAAATGGTATCACAGTTCACAATAG 57.732 34.615 0.00 0.00 0.00 1.73
3064 3638 6.683974 AATGGTATCACAGTTCACAATAGC 57.316 37.500 0.00 0.00 0.00 2.97
3065 3639 5.159273 TGGTATCACAGTTCACAATAGCA 57.841 39.130 0.00 0.00 0.00 3.49
3066 3640 5.178061 TGGTATCACAGTTCACAATAGCAG 58.822 41.667 0.00 0.00 0.00 4.24
3067 3641 5.046663 TGGTATCACAGTTCACAATAGCAGA 60.047 40.000 0.00 0.00 0.00 4.26
3068 3642 6.051717 GGTATCACAGTTCACAATAGCAGAT 58.948 40.000 0.00 0.00 0.00 2.90
3069 3643 6.540189 GGTATCACAGTTCACAATAGCAGATT 59.460 38.462 0.00 0.00 0.00 2.40
3070 3644 7.710907 GGTATCACAGTTCACAATAGCAGATTA 59.289 37.037 0.00 0.00 0.00 1.75
3071 3645 9.265901 GTATCACAGTTCACAATAGCAGATTAT 57.734 33.333 0.00 0.00 0.00 1.28
3072 3646 7.776933 TCACAGTTCACAATAGCAGATTATC 57.223 36.000 0.00 0.00 0.00 1.75
3073 3647 7.559486 TCACAGTTCACAATAGCAGATTATCT 58.441 34.615 0.00 0.00 0.00 1.98
3074 3648 8.043113 TCACAGTTCACAATAGCAGATTATCTT 58.957 33.333 0.00 0.00 0.00 2.40
3075 3649 9.317936 CACAGTTCACAATAGCAGATTATCTTA 57.682 33.333 0.00 0.00 0.00 2.10
3132 3706 9.807649 AAAATGATATATTGTTGCTGGAAGTTC 57.192 29.630 0.00 0.00 35.30 3.01
3133 3707 8.757982 AATGATATATTGTTGCTGGAAGTTCT 57.242 30.769 2.25 0.00 35.30 3.01
3134 3708 8.757982 ATGATATATTGTTGCTGGAAGTTCTT 57.242 30.769 2.25 0.00 35.30 2.52
3135 3709 8.213518 TGATATATTGTTGCTGGAAGTTCTTC 57.786 34.615 2.25 4.19 35.30 2.87
3136 3710 3.904136 ATTGTTGCTGGAAGTTCTTCG 57.096 42.857 2.25 0.00 35.30 3.79
3137 3711 2.613026 TGTTGCTGGAAGTTCTTCGA 57.387 45.000 2.25 2.41 35.30 3.71
3138 3712 3.126001 TGTTGCTGGAAGTTCTTCGAT 57.874 42.857 2.25 0.00 35.30 3.59
3139 3713 3.476552 TGTTGCTGGAAGTTCTTCGATT 58.523 40.909 2.25 0.00 35.30 3.34
3140 3714 3.882888 TGTTGCTGGAAGTTCTTCGATTT 59.117 39.130 2.25 0.00 35.30 2.17
3141 3715 5.060506 TGTTGCTGGAAGTTCTTCGATTTA 58.939 37.500 2.25 0.00 35.30 1.40
3142 3716 5.179368 TGTTGCTGGAAGTTCTTCGATTTAG 59.821 40.000 2.25 0.00 35.30 1.85
3143 3717 4.894784 TGCTGGAAGTTCTTCGATTTAGT 58.105 39.130 2.25 0.00 35.30 2.24
3144 3718 5.305585 TGCTGGAAGTTCTTCGATTTAGTT 58.694 37.500 2.25 0.00 35.30 2.24
3145 3719 5.179368 TGCTGGAAGTTCTTCGATTTAGTTG 59.821 40.000 2.25 0.00 35.30 3.16
3146 3720 5.179555 GCTGGAAGTTCTTCGATTTAGTTGT 59.820 40.000 2.25 0.00 35.30 3.32
3147 3721 6.367969 GCTGGAAGTTCTTCGATTTAGTTGTA 59.632 38.462 2.25 0.00 35.30 2.41
3148 3722 7.064728 GCTGGAAGTTCTTCGATTTAGTTGTAT 59.935 37.037 2.25 0.00 35.30 2.29
3149 3723 8.251750 TGGAAGTTCTTCGATTTAGTTGTATG 57.748 34.615 2.25 0.00 0.00 2.39
3150 3724 8.092068 TGGAAGTTCTTCGATTTAGTTGTATGA 58.908 33.333 2.25 0.00 0.00 2.15
3151 3725 9.099454 GGAAGTTCTTCGATTTAGTTGTATGAT 57.901 33.333 2.25 0.00 0.00 2.45
3177 3751 8.969260 ATTCACACTGTATACACATCAATCAT 57.031 30.769 0.08 0.00 33.14 2.45
3178 3752 8.791327 TTCACACTGTATACACATCAATCATT 57.209 30.769 0.08 0.00 33.14 2.57
3179 3753 8.791327 TCACACTGTATACACATCAATCATTT 57.209 30.769 0.08 0.00 33.14 2.32
3180 3754 9.230122 TCACACTGTATACACATCAATCATTTT 57.770 29.630 0.08 0.00 33.14 1.82
3181 3755 9.844790 CACACTGTATACACATCAATCATTTTT 57.155 29.630 0.08 0.00 33.14 1.94
3200 3774 5.514274 TTTTTGTCTGGGACATCACTTTC 57.486 39.130 1.10 0.00 42.40 2.62
3201 3775 2.859165 TGTCTGGGACATCACTTTCC 57.141 50.000 0.00 0.00 37.67 3.13
3202 3776 1.001974 TGTCTGGGACATCACTTTCCG 59.998 52.381 0.00 0.00 37.67 4.30
3203 3777 1.002087 GTCTGGGACATCACTTTCCGT 59.998 52.381 0.00 0.00 38.20 4.69
3204 3778 1.275291 TCTGGGACATCACTTTCCGTC 59.725 52.381 0.00 0.00 38.20 4.79
3205 3779 0.323629 TGGGACATCACTTTCCGTCC 59.676 55.000 0.00 0.00 45.95 4.79
3206 3780 0.613777 GGGACATCACTTTCCGTCCT 59.386 55.000 7.32 0.00 45.94 3.85
3207 3781 1.405661 GGGACATCACTTTCCGTCCTC 60.406 57.143 7.32 0.00 45.94 3.71
3208 3782 1.275291 GGACATCACTTTCCGTCCTCA 59.725 52.381 0.00 0.00 43.79 3.86
3209 3783 2.093447 GGACATCACTTTCCGTCCTCAT 60.093 50.000 0.00 0.00 43.79 2.90
3210 3784 3.190874 GACATCACTTTCCGTCCTCATC 58.809 50.000 0.00 0.00 0.00 2.92
3211 3785 2.834549 ACATCACTTTCCGTCCTCATCT 59.165 45.455 0.00 0.00 0.00 2.90
3212 3786 3.118956 ACATCACTTTCCGTCCTCATCTC 60.119 47.826 0.00 0.00 0.00 2.75
3213 3787 2.808919 TCACTTTCCGTCCTCATCTCT 58.191 47.619 0.00 0.00 0.00 3.10
3214 3788 3.165875 TCACTTTCCGTCCTCATCTCTT 58.834 45.455 0.00 0.00 0.00 2.85
3215 3789 3.578716 TCACTTTCCGTCCTCATCTCTTT 59.421 43.478 0.00 0.00 0.00 2.52
3216 3790 3.929610 CACTTTCCGTCCTCATCTCTTTC 59.070 47.826 0.00 0.00 0.00 2.62
3217 3791 3.835395 ACTTTCCGTCCTCATCTCTTTCT 59.165 43.478 0.00 0.00 0.00 2.52
3218 3792 4.081917 ACTTTCCGTCCTCATCTCTTTCTC 60.082 45.833 0.00 0.00 0.00 2.87
3219 3793 3.374042 TCCGTCCTCATCTCTTTCTCT 57.626 47.619 0.00 0.00 0.00 3.10
3220 3794 3.702792 TCCGTCCTCATCTCTTTCTCTT 58.297 45.455 0.00 0.00 0.00 2.85
3221 3795 3.445450 TCCGTCCTCATCTCTTTCTCTTG 59.555 47.826 0.00 0.00 0.00 3.02
3222 3796 3.194542 CCGTCCTCATCTCTTTCTCTTGT 59.805 47.826 0.00 0.00 0.00 3.16
3223 3797 4.322349 CCGTCCTCATCTCTTTCTCTTGTT 60.322 45.833 0.00 0.00 0.00 2.83
3224 3798 4.862018 CGTCCTCATCTCTTTCTCTTGTTC 59.138 45.833 0.00 0.00 0.00 3.18
3225 3799 5.336372 CGTCCTCATCTCTTTCTCTTGTTCT 60.336 44.000 0.00 0.00 0.00 3.01
3226 3800 6.463360 GTCCTCATCTCTTTCTCTTGTTCTT 58.537 40.000 0.00 0.00 0.00 2.52
3227 3801 6.589907 GTCCTCATCTCTTTCTCTTGTTCTTC 59.410 42.308 0.00 0.00 0.00 2.87
3228 3802 5.874261 CCTCATCTCTTTCTCTTGTTCTTCC 59.126 44.000 0.00 0.00 0.00 3.46
3229 3803 6.295802 CCTCATCTCTTTCTCTTGTTCTTCCT 60.296 42.308 0.00 0.00 0.00 3.36
3230 3804 6.696411 TCATCTCTTTCTCTTGTTCTTCCTC 58.304 40.000 0.00 0.00 0.00 3.71
3231 3805 5.127693 TCTCTTTCTCTTGTTCTTCCTCG 57.872 43.478 0.00 0.00 0.00 4.63
3232 3806 3.654414 TCTTTCTCTTGTTCTTCCTCGC 58.346 45.455 0.00 0.00 0.00 5.03
3233 3807 3.322254 TCTTTCTCTTGTTCTTCCTCGCT 59.678 43.478 0.00 0.00 0.00 4.93
3234 3808 3.305398 TTCTCTTGTTCTTCCTCGCTC 57.695 47.619 0.00 0.00 0.00 5.03
3235 3809 1.546476 TCTCTTGTTCTTCCTCGCTCC 59.454 52.381 0.00 0.00 0.00 4.70
3236 3810 1.548269 CTCTTGTTCTTCCTCGCTCCT 59.452 52.381 0.00 0.00 0.00 3.69
3237 3811 1.971357 TCTTGTTCTTCCTCGCTCCTT 59.029 47.619 0.00 0.00 0.00 3.36
3238 3812 3.162666 TCTTGTTCTTCCTCGCTCCTTA 58.837 45.455 0.00 0.00 0.00 2.69
3239 3813 3.193691 TCTTGTTCTTCCTCGCTCCTTAG 59.806 47.826 0.00 0.00 0.00 2.18
3240 3814 1.825474 TGTTCTTCCTCGCTCCTTAGG 59.175 52.381 0.00 0.00 0.00 2.69
3241 3815 0.824759 TTCTTCCTCGCTCCTTAGGC 59.175 55.000 0.00 0.00 32.55 3.93
3242 3816 0.324368 TCTTCCTCGCTCCTTAGGCA 60.324 55.000 0.00 0.00 32.55 4.75
3243 3817 0.755686 CTTCCTCGCTCCTTAGGCAT 59.244 55.000 0.00 0.00 32.55 4.40
3244 3818 1.964223 CTTCCTCGCTCCTTAGGCATA 59.036 52.381 0.00 0.00 32.55 3.14
3245 3819 1.621992 TCCTCGCTCCTTAGGCATAG 58.378 55.000 0.00 0.00 32.55 2.23
3246 3820 1.145119 TCCTCGCTCCTTAGGCATAGA 59.855 52.381 0.00 0.00 32.55 1.98
3247 3821 1.964223 CCTCGCTCCTTAGGCATAGAA 59.036 52.381 0.00 0.00 0.00 2.10
3248 3822 2.365617 CCTCGCTCCTTAGGCATAGAAA 59.634 50.000 0.00 0.00 0.00 2.52
3249 3823 3.007398 CCTCGCTCCTTAGGCATAGAAAT 59.993 47.826 0.00 0.00 0.00 2.17
3250 3824 4.220821 CCTCGCTCCTTAGGCATAGAAATA 59.779 45.833 0.00 0.00 0.00 1.40
3251 3825 5.279506 CCTCGCTCCTTAGGCATAGAAATAA 60.280 44.000 0.00 0.00 0.00 1.40
3252 3826 6.360370 TCGCTCCTTAGGCATAGAAATAAT 57.640 37.500 0.00 0.00 0.00 1.28
3253 3827 7.363880 CCTCGCTCCTTAGGCATAGAAATAATA 60.364 40.741 0.00 0.00 0.00 0.98
3254 3828 8.079211 TCGCTCCTTAGGCATAGAAATAATAT 57.921 34.615 0.00 0.00 0.00 1.28
3255 3829 7.981789 TCGCTCCTTAGGCATAGAAATAATATG 59.018 37.037 0.00 0.00 34.40 1.78
3285 3859 9.533253 CCATTAGGCTTTATTTTAGGACAAATG 57.467 33.333 0.00 0.00 0.00 2.32
3288 3862 9.747898 TTAGGCTTTATTTTAGGACAAATGAGA 57.252 29.630 0.00 0.00 0.00 3.27
3289 3863 8.650143 AGGCTTTATTTTAGGACAAATGAGAA 57.350 30.769 0.00 0.00 0.00 2.87
3290 3864 9.259832 AGGCTTTATTTTAGGACAAATGAGAAT 57.740 29.630 0.00 0.00 0.00 2.40
3291 3865 9.305925 GGCTTTATTTTAGGACAAATGAGAATG 57.694 33.333 0.00 0.00 0.00 2.67
3295 3869 5.545658 TTTAGGACAAATGAGAATGACGC 57.454 39.130 0.00 0.00 0.00 5.19
3296 3870 3.340814 AGGACAAATGAGAATGACGCT 57.659 42.857 0.00 0.00 0.00 5.07
3297 3871 3.005554 AGGACAAATGAGAATGACGCTG 58.994 45.455 0.00 0.00 0.00 5.18
3298 3872 3.002791 GGACAAATGAGAATGACGCTGA 58.997 45.455 0.00 0.00 0.00 4.26
3299 3873 3.624861 GGACAAATGAGAATGACGCTGAT 59.375 43.478 0.00 0.00 0.00 2.90
3300 3874 4.811024 GGACAAATGAGAATGACGCTGATA 59.189 41.667 0.00 0.00 0.00 2.15
3301 3875 5.294306 GGACAAATGAGAATGACGCTGATAA 59.706 40.000 0.00 0.00 0.00 1.75
3302 3876 6.017605 GGACAAATGAGAATGACGCTGATAAT 60.018 38.462 0.00 0.00 0.00 1.28
3303 3877 7.325660 ACAAATGAGAATGACGCTGATAATT 57.674 32.000 0.00 0.00 0.00 1.40
3304 3878 8.437360 ACAAATGAGAATGACGCTGATAATTA 57.563 30.769 0.00 0.00 0.00 1.40
3305 3879 9.060347 ACAAATGAGAATGACGCTGATAATTAT 57.940 29.630 0.00 0.00 0.00 1.28
3306 3880 9.888878 CAAATGAGAATGACGCTGATAATTATT 57.111 29.630 0.00 0.00 0.00 1.40
3310 3884 9.764363 TGAGAATGACGCTGATAATTATTTAGT 57.236 29.630 0.00 0.00 0.00 2.24
3315 3889 8.942338 TGACGCTGATAATTATTTAGTTGTCT 57.058 30.769 21.48 0.00 0.00 3.41
3316 3890 9.031360 TGACGCTGATAATTATTTAGTTGTCTC 57.969 33.333 21.48 5.03 0.00 3.36
3317 3891 8.942338 ACGCTGATAATTATTTAGTTGTCTCA 57.058 30.769 0.00 0.00 0.00 3.27
3318 3892 8.818057 ACGCTGATAATTATTTAGTTGTCTCAC 58.182 33.333 0.00 0.00 0.00 3.51
3319 3893 8.817100 CGCTGATAATTATTTAGTTGTCTCACA 58.183 33.333 0.00 0.00 0.00 3.58
3357 3931 5.405331 ACGAAAGTAGACAAAAGCTTCAC 57.595 39.130 0.00 0.00 46.88 3.18
3358 3932 4.873827 ACGAAAGTAGACAAAAGCTTCACA 59.126 37.500 0.00 0.00 46.88 3.58
3359 3933 5.527582 ACGAAAGTAGACAAAAGCTTCACAT 59.472 36.000 0.00 0.00 46.88 3.21
3360 3934 6.074005 CGAAAGTAGACAAAAGCTTCACATC 58.926 40.000 0.00 0.00 0.00 3.06
3361 3935 6.073548 CGAAAGTAGACAAAAGCTTCACATCT 60.074 38.462 0.00 3.63 0.00 2.90
3362 3936 6.551385 AAGTAGACAAAAGCTTCACATCTG 57.449 37.500 0.00 0.00 0.00 2.90
3363 3937 5.858381 AGTAGACAAAAGCTTCACATCTGA 58.142 37.500 0.00 0.00 0.00 3.27
3364 3938 5.698545 AGTAGACAAAAGCTTCACATCTGAC 59.301 40.000 0.00 1.69 0.00 3.51
3365 3939 4.454678 AGACAAAAGCTTCACATCTGACA 58.545 39.130 0.00 0.00 0.00 3.58
3366 3940 4.274459 AGACAAAAGCTTCACATCTGACAC 59.726 41.667 0.00 0.00 0.00 3.67
3367 3941 3.947196 ACAAAAGCTTCACATCTGACACA 59.053 39.130 0.00 0.00 0.00 3.72
3368 3942 4.398988 ACAAAAGCTTCACATCTGACACAA 59.601 37.500 0.00 0.00 0.00 3.33
3369 3943 4.825546 AAAGCTTCACATCTGACACAAG 57.174 40.909 0.00 0.00 0.00 3.16
3370 3944 3.482156 AGCTTCACATCTGACACAAGT 57.518 42.857 0.00 0.00 0.00 3.16
3371 3945 4.607293 AGCTTCACATCTGACACAAGTA 57.393 40.909 0.00 0.00 0.00 2.24
3372 3946 5.157940 AGCTTCACATCTGACACAAGTAT 57.842 39.130 0.00 0.00 0.00 2.12
3373 3947 6.286240 AGCTTCACATCTGACACAAGTATA 57.714 37.500 0.00 0.00 0.00 1.47
3374 3948 6.882656 AGCTTCACATCTGACACAAGTATAT 58.117 36.000 0.00 0.00 0.00 0.86
3375 3949 8.011844 AGCTTCACATCTGACACAAGTATATA 57.988 34.615 0.00 0.00 0.00 0.86
3376 3950 7.923344 AGCTTCACATCTGACACAAGTATATAC 59.077 37.037 4.60 4.60 0.00 1.47
3377 3951 7.923344 GCTTCACATCTGACACAAGTATATACT 59.077 37.037 9.71 9.71 38.39 2.12
3378 3952 9.809096 CTTCACATCTGACACAAGTATATACTT 57.191 33.333 20.27 20.27 46.76 2.24
3401 3975 9.924650 ACTTAATAAGCAGTTATTATCCTACCG 57.075 33.333 0.00 0.00 39.68 4.02
3404 3978 7.778185 ATAAGCAGTTATTATCCTACCGAGT 57.222 36.000 0.00 0.00 0.00 4.18
3405 3979 6.481434 AAGCAGTTATTATCCTACCGAGTT 57.519 37.500 0.00 0.00 0.00 3.01
3406 3980 5.844004 AGCAGTTATTATCCTACCGAGTTG 58.156 41.667 0.00 0.00 0.00 3.16
3407 3981 4.448060 GCAGTTATTATCCTACCGAGTTGC 59.552 45.833 0.00 0.00 0.00 4.17
3408 3982 5.597806 CAGTTATTATCCTACCGAGTTGCA 58.402 41.667 0.00 0.00 0.00 4.08
3409 3983 5.462398 CAGTTATTATCCTACCGAGTTGCAC 59.538 44.000 0.00 0.00 0.00 4.57
3410 3984 5.363005 AGTTATTATCCTACCGAGTTGCACT 59.637 40.000 0.00 0.00 0.00 4.40
3411 3985 6.548622 AGTTATTATCCTACCGAGTTGCACTA 59.451 38.462 0.00 0.00 0.00 2.74
3412 3986 4.644103 TTATCCTACCGAGTTGCACTAC 57.356 45.455 0.00 0.00 0.00 2.73
3413 3987 2.211250 TCCTACCGAGTTGCACTACT 57.789 50.000 0.00 0.00 0.00 2.57
3414 3988 3.354948 TCCTACCGAGTTGCACTACTA 57.645 47.619 0.00 0.00 0.00 1.82
3415 3989 3.894759 TCCTACCGAGTTGCACTACTAT 58.105 45.455 0.00 0.00 0.00 2.12
3416 3990 4.275810 TCCTACCGAGTTGCACTACTATT 58.724 43.478 0.00 0.00 0.00 1.73
3417 3991 5.439721 TCCTACCGAGTTGCACTACTATTA 58.560 41.667 0.00 0.00 0.00 0.98
3418 3992 5.887598 TCCTACCGAGTTGCACTACTATTAA 59.112 40.000 0.00 0.00 0.00 1.40
3419 3993 6.548622 TCCTACCGAGTTGCACTACTATTAAT 59.451 38.462 0.00 0.00 0.00 1.40
3420 3994 6.641314 CCTACCGAGTTGCACTACTATTAATG 59.359 42.308 0.00 0.00 0.00 1.90
3421 3995 5.974108 ACCGAGTTGCACTACTATTAATGT 58.026 37.500 0.00 0.00 0.00 2.71
3422 3996 6.403878 ACCGAGTTGCACTACTATTAATGTT 58.596 36.000 0.00 0.00 0.00 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.428413 ACTTGGTTATAACGCCTGGTT 57.572 42.857 9.46 0.00 42.75 3.67
2 3 4.765813 ATACTTGGTTATAACGCCTGGT 57.234 40.909 9.46 6.56 0.00 4.00
3 4 5.467735 GGTTATACTTGGTTATAACGCCTGG 59.532 44.000 9.46 0.00 39.05 4.45
4 5 5.176223 CGGTTATACTTGGTTATAACGCCTG 59.824 44.000 9.46 2.94 39.05 4.85
6 7 4.448732 CCGGTTATACTTGGTTATAACGCC 59.551 45.833 9.46 0.00 39.05 5.68
7 8 4.448732 CCCGGTTATACTTGGTTATAACGC 59.551 45.833 9.46 3.72 39.05 4.84
8 9 4.448732 GCCCGGTTATACTTGGTTATAACG 59.551 45.833 9.46 0.00 39.05 3.18
9 10 4.448732 CGCCCGGTTATACTTGGTTATAAC 59.551 45.833 7.09 7.09 38.03 1.89
10 11 4.100808 ACGCCCGGTTATACTTGGTTATAA 59.899 41.667 0.00 0.00 0.00 0.98
11 12 3.640967 ACGCCCGGTTATACTTGGTTATA 59.359 43.478 0.00 0.00 0.00 0.98
12 13 2.435437 ACGCCCGGTTATACTTGGTTAT 59.565 45.455 0.00 0.00 0.00 1.89
13 14 1.830477 ACGCCCGGTTATACTTGGTTA 59.170 47.619 0.00 0.00 0.00 2.85
14 15 0.614812 ACGCCCGGTTATACTTGGTT 59.385 50.000 0.00 0.00 0.00 3.67
15 16 0.614812 AACGCCCGGTTATACTTGGT 59.385 50.000 0.00 0.00 37.00 3.67
16 17 2.600470 TAACGCCCGGTTATACTTGG 57.400 50.000 0.00 0.00 40.09 3.61
17 18 3.260740 TGTTAACGCCCGGTTATACTTG 58.739 45.455 0.00 0.00 40.64 3.16
18 19 3.608316 TGTTAACGCCCGGTTATACTT 57.392 42.857 0.00 0.00 40.64 2.24
19 20 3.132646 TGATGTTAACGCCCGGTTATACT 59.867 43.478 0.00 0.00 40.64 2.12
20 21 3.245990 GTGATGTTAACGCCCGGTTATAC 59.754 47.826 0.00 0.00 40.64 1.47
21 22 3.456280 GTGATGTTAACGCCCGGTTATA 58.544 45.455 0.00 0.00 40.64 0.98
22 23 2.282407 GTGATGTTAACGCCCGGTTAT 58.718 47.619 0.00 0.00 40.64 1.89
23 24 1.675415 GGTGATGTTAACGCCCGGTTA 60.675 52.381 0.00 0.00 40.09 2.85
24 25 0.956902 GGTGATGTTAACGCCCGGTT 60.957 55.000 0.00 0.00 42.75 4.44
25 26 1.376295 GGTGATGTTAACGCCCGGT 60.376 57.895 0.00 0.00 32.47 5.28
26 27 0.956410 TTGGTGATGTTAACGCCCGG 60.956 55.000 0.00 0.00 37.14 5.73
27 28 0.875728 TTTGGTGATGTTAACGCCCG 59.124 50.000 0.26 0.00 37.14 6.13
28 29 1.609555 TGTTTGGTGATGTTAACGCCC 59.390 47.619 0.26 0.00 37.14 6.13
36 37 2.104111 TCTCGGAGTTGTTTGGTGATGT 59.896 45.455 4.69 0.00 0.00 3.06
47 48 1.813513 AATGTGGCTTCTCGGAGTTG 58.186 50.000 4.69 0.64 0.00 3.16
51 52 0.881118 GCAAAATGTGGCTTCTCGGA 59.119 50.000 0.00 0.00 0.00 4.55
87 88 4.865905 TGTATTGGCCTATGTTGGTGATT 58.134 39.130 10.19 0.00 0.00 2.57
101 102 4.497340 CGGTTGATGGTTGTATGTATTGGC 60.497 45.833 0.00 0.00 0.00 4.52
106 107 2.027100 TGGCGGTTGATGGTTGTATGTA 60.027 45.455 0.00 0.00 0.00 2.29
125 126 2.437716 AGCGCCCGGTTGTATTGG 60.438 61.111 2.29 0.00 0.00 3.16
139 140 2.810274 AGCATGATAATGGTTAGCAGCG 59.190 45.455 0.00 0.00 34.70 5.18
141 142 7.502120 AAGTTAGCATGATAATGGTTAGCAG 57.498 36.000 6.70 0.00 34.70 4.24
149 158 9.571810 TTTTGCTTGTAAGTTAGCATGATAATG 57.428 29.630 6.70 0.00 45.92 1.90
153 162 7.543172 CACATTTTGCTTGTAAGTTAGCATGAT 59.457 33.333 0.00 0.00 45.92 2.45
154 163 6.862608 CACATTTTGCTTGTAAGTTAGCATGA 59.137 34.615 0.00 0.00 45.92 3.07
183 192 9.745018 AGTCTTCCAAAATTATTCAGAAGATGA 57.255 29.630 13.51 0.00 38.15 2.92
195 204 9.871175 AACCTAACCTTAAGTCTTCCAAAATTA 57.129 29.630 0.97 0.00 0.00 1.40
196 205 8.777578 AACCTAACCTTAAGTCTTCCAAAATT 57.222 30.769 0.97 0.00 0.00 1.82
197 206 9.871175 TTAACCTAACCTTAAGTCTTCCAAAAT 57.129 29.630 0.97 0.00 0.00 1.82
208 217 7.711339 CAGTAGCCAGATTAACCTAACCTTAAG 59.289 40.741 0.00 0.00 0.00 1.85
211 220 5.724854 TCAGTAGCCAGATTAACCTAACCTT 59.275 40.000 0.00 0.00 0.00 3.50
214 223 6.875076 TCTTCAGTAGCCAGATTAACCTAAC 58.125 40.000 0.00 0.00 0.00 2.34
218 227 5.119694 CCTTCTTCAGTAGCCAGATTAACC 58.880 45.833 0.00 0.00 0.00 2.85
219 228 4.572795 GCCTTCTTCAGTAGCCAGATTAAC 59.427 45.833 0.00 0.00 0.00 2.01
225 234 1.470632 CGAGCCTTCTTCAGTAGCCAG 60.471 57.143 0.00 0.00 0.00 4.85
235 247 5.532779 AGATTTGAAGAAAACGAGCCTTCTT 59.467 36.000 0.00 0.00 43.03 2.52
240 252 3.432252 TCGAGATTTGAAGAAAACGAGCC 59.568 43.478 0.00 0.00 0.00 4.70
263 275 7.436673 GCATCGAACTCACTAATCTTACTCAAT 59.563 37.037 0.00 0.00 0.00 2.57
266 278 6.266323 TGCATCGAACTCACTAATCTTACTC 58.734 40.000 0.00 0.00 0.00 2.59
274 286 6.148645 TGCTTATTTTGCATCGAACTCACTAA 59.851 34.615 0.00 0.00 35.31 2.24
284 296 4.852138 ACATAGCTGCTTATTTTGCATCG 58.148 39.130 7.79 0.00 39.86 3.84
322 334 2.947652 AGCCTGTTGCATTACATAGCTG 59.052 45.455 12.82 0.00 44.83 4.24
331 343 2.168106 TGTTGAAACAGCCTGTTGCATT 59.832 40.909 18.83 0.00 44.75 3.56
332 344 1.755959 TGTTGAAACAGCCTGTTGCAT 59.244 42.857 18.83 0.00 44.75 3.96
333 345 1.180907 TGTTGAAACAGCCTGTTGCA 58.819 45.000 14.42 14.42 43.79 4.08
357 369 4.255510 AGCATTGTATCCATGGGAACTT 57.744 40.909 13.02 0.35 34.34 2.66
359 371 6.449698 CATTTAGCATTGTATCCATGGGAAC 58.550 40.000 13.02 11.02 34.34 3.62
362 374 4.221262 CCCATTTAGCATTGTATCCATGGG 59.779 45.833 13.02 0.00 42.83 4.00
412 433 8.408043 TCCTAGTTTTGATGACATGATTGTTT 57.592 30.769 0.00 0.00 35.79 2.83
440 461 9.857656 ACATGATCATGATAAAACTACAAGGAT 57.142 29.630 36.37 9.76 41.20 3.24
488 551 1.959085 CCGGTGGGATGCATTATGC 59.041 57.895 10.65 10.65 38.86 3.14
503 566 2.839162 CCCCAATGCCATTCCCGG 60.839 66.667 0.00 0.00 0.00 5.73
505 568 1.458209 CCTCCCCAATGCCATTCCC 60.458 63.158 0.00 0.00 0.00 3.97
521 584 1.298014 CTCGCTGCTTTCCCTTCCT 59.702 57.895 0.00 0.00 0.00 3.36
592 660 1.884926 GCCTCCTGCACATCTACGC 60.885 63.158 0.00 0.00 40.77 4.42
696 767 3.618855 TTCCCCAGCTACTCCCGCT 62.619 63.158 0.00 0.00 38.49 5.52
722 799 1.519455 GATCTACTGCCAAGCGCGT 60.519 57.895 8.43 0.00 42.08 6.01
807 892 3.839432 CGCCGTCCTCCTCCTTCC 61.839 72.222 0.00 0.00 0.00 3.46
839 924 2.631062 TGCAAAGAAGTCCCTCGTCTTA 59.369 45.455 0.00 0.00 42.28 2.10
852 937 3.009473 AGGGAGTGCTTCTATGCAAAGAA 59.991 43.478 0.71 0.00 45.12 2.52
869 954 1.135960 GAAATGAGGGAGGGAGGGAG 58.864 60.000 0.00 0.00 0.00 4.30
875 960 3.107601 TCTGTACAGAAATGAGGGAGGG 58.892 50.000 23.24 0.00 33.91 4.30
877 962 5.363868 TGGTATCTGTACAGAAATGAGGGAG 59.636 44.000 28.43 0.00 41.36 4.30
879 964 5.605534 CTGGTATCTGTACAGAAATGAGGG 58.394 45.833 28.43 12.11 41.36 4.30
880 965 5.053145 GCTGGTATCTGTACAGAAATGAGG 58.947 45.833 28.43 17.10 41.36 3.86
881 966 5.521735 GTGCTGGTATCTGTACAGAAATGAG 59.478 44.000 28.43 20.86 41.36 2.90
883 968 5.292834 CAGTGCTGGTATCTGTACAGAAATG 59.707 44.000 28.43 15.61 41.36 2.32
884 969 5.423015 CAGTGCTGGTATCTGTACAGAAAT 58.577 41.667 28.43 16.10 41.36 2.17
885 970 4.820897 CAGTGCTGGTATCTGTACAGAAA 58.179 43.478 28.43 13.76 41.36 2.52
887 972 2.166459 GCAGTGCTGGTATCTGTACAGA 59.834 50.000 27.07 27.07 42.37 3.41
889 974 1.899142 TGCAGTGCTGGTATCTGTACA 59.101 47.619 17.60 0.00 32.25 2.90
890 975 2.672961 TGCAGTGCTGGTATCTGTAC 57.327 50.000 17.60 0.00 0.00 2.90
894 979 2.238144 ACAGATTGCAGTGCTGGTATCT 59.762 45.455 17.60 14.90 34.05 1.98
898 983 2.637521 CACAGATTGCAGTGCTGGT 58.362 52.632 17.60 1.64 34.05 4.00
919 1004 3.626217 GGACCGTGGGATTAAAGATGAAC 59.374 47.826 0.00 0.00 0.00 3.18
928 1013 0.539986 GAAGCTGGACCGTGGGATTA 59.460 55.000 0.00 0.00 0.00 1.75
1157 1250 2.066999 GGGGGAGCTGAATCCGACT 61.067 63.158 0.00 0.00 40.56 4.18
1181 1274 3.343941 ACCAACCTTATTAGCTCGCAA 57.656 42.857 0.00 0.00 0.00 4.85
1182 1275 3.006940 CAACCAACCTTATTAGCTCGCA 58.993 45.455 0.00 0.00 0.00 5.10
1183 1276 3.007635 ACAACCAACCTTATTAGCTCGC 58.992 45.455 0.00 0.00 0.00 5.03
1324 1422 2.925170 CATAGCCGAGGGAGGGGG 60.925 72.222 0.00 0.00 0.00 5.40
1325 1423 2.755439 ATCCATAGCCGAGGGAGGGG 62.755 65.000 0.00 0.00 42.54 4.79
1327 1425 0.542938 TCATCCATAGCCGAGGGAGG 60.543 60.000 0.00 0.00 42.54 4.30
1328 1426 1.001406 GTTCATCCATAGCCGAGGGAG 59.999 57.143 0.00 0.00 42.54 4.30
1329 1427 1.048601 GTTCATCCATAGCCGAGGGA 58.951 55.000 0.00 0.00 43.68 4.20
1333 1431 1.116308 TTCCGTTCATCCATAGCCGA 58.884 50.000 0.00 0.00 0.00 5.54
1349 1447 0.869880 GCAACACGCAAACCAGTTCC 60.870 55.000 0.00 0.00 41.79 3.62
1353 1451 1.299316 CAGGCAACACGCAAACCAG 60.299 57.895 0.00 0.00 45.17 4.00
1354 1452 2.804167 CAGGCAACACGCAAACCA 59.196 55.556 0.00 0.00 45.17 3.67
1355 1453 2.658268 GCAGGCAACACGCAAACC 60.658 61.111 0.00 0.00 45.17 3.27
1383 1650 4.407496 TTTCATTAACCTAAACACCGCG 57.593 40.909 0.00 0.00 0.00 6.46
1385 1652 6.588373 CCCAATTTTCATTAACCTAAACACCG 59.412 38.462 0.00 0.00 0.00 4.94
1389 1664 7.491372 GCTAGCCCAATTTTCATTAACCTAAAC 59.509 37.037 2.29 0.00 0.00 2.01
1390 1665 7.398904 AGCTAGCCCAATTTTCATTAACCTAAA 59.601 33.333 12.13 0.00 0.00 1.85
1415 1690 3.604772 GCAGAATCGCTTGCCGTAATTAG 60.605 47.826 0.00 0.00 38.35 1.73
1419 1694 0.672091 TGCAGAATCGCTTGCCGTAA 60.672 50.000 0.00 0.00 38.35 3.18
1422 1697 0.179156 ATTTGCAGAATCGCTTGCCG 60.179 50.000 0.00 0.00 38.61 5.69
1449 1724 7.879070 AGTATAGTTCATATTGCTGCCAAATG 58.121 34.615 0.00 0.00 34.05 2.32
1496 1771 2.735259 AACTACTCCCTCCTTCCCAA 57.265 50.000 0.00 0.00 0.00 4.12
1497 1772 3.078612 AGTTAACTACTCCCTCCTTCCCA 59.921 47.826 6.26 0.00 28.23 4.37
1502 1777 6.743788 AGTAATCAGTTAACTACTCCCTCCT 58.256 40.000 8.04 0.00 33.85 3.69
1563 1839 7.824289 AGCTTCTCTGTGTTATTAAGCAATACA 59.176 33.333 0.00 3.30 41.31 2.29
1564 1840 8.202745 AGCTTCTCTGTGTTATTAAGCAATAC 57.797 34.615 0.00 0.00 41.31 1.89
1572 1848 6.166279 CCTCACAAGCTTCTCTGTGTTATTA 58.834 40.000 14.32 0.00 34.27 0.98
1596 2002 6.322491 GCAAACCACACCTCATTCTAATAAC 58.678 40.000 0.00 0.00 0.00 1.89
1645 2051 2.967459 TGCACAAGCGTATTCAACAG 57.033 45.000 0.00 0.00 46.23 3.16
1654 2060 1.676014 GGACTAGGATTGCACAAGCGT 60.676 52.381 0.00 0.00 46.23 5.07
1702 2108 5.581085 AGAACGCAAAAGGTACATCATCTAC 59.419 40.000 0.00 0.00 0.00 2.59
1750 2156 1.035139 GTGGGGGCTGCATAATGAAG 58.965 55.000 0.50 0.00 0.00 3.02
1753 2159 0.683828 TGTGTGGGGGCTGCATAATG 60.684 55.000 0.50 0.00 0.00 1.90
1771 2177 3.113322 GCACATTGCTGCATGAGTATTG 58.887 45.455 1.84 0.88 40.96 1.90
1943 2395 6.414732 CCATTCTAGACAACAGGTTAATCCA 58.585 40.000 0.00 0.00 39.02 3.41
1982 2434 7.320443 TCCTGCAATATCACATAAGAAACAC 57.680 36.000 0.00 0.00 0.00 3.32
2165 2619 2.795231 AGCTGCTGGATGTACAATGT 57.205 45.000 0.00 0.00 0.00 2.71
2434 2889 1.890979 CCTAGCATGCCTGGCTTCG 60.891 63.158 21.03 9.12 42.62 3.79
2451 2911 6.635030 ATGTTGTCAAAACTAGAGGAAACC 57.365 37.500 0.00 0.00 0.00 3.27
2483 2959 7.272978 TCAATATAAGCAGTCTACAAGGTTCC 58.727 38.462 0.00 0.00 0.00 3.62
2551 3032 6.703607 GTGATACTATTGAGTGCATGTAAGCT 59.296 38.462 0.00 0.00 36.28 3.74
2553 3034 7.708322 ACTGTGATACTATTGAGTGCATGTAAG 59.292 37.037 0.00 0.00 36.28 2.34
2557 3038 6.283161 CACTGTGATACTATTGAGTGCATG 57.717 41.667 0.32 0.00 36.28 4.06
2643 3125 0.538287 GCCAGGAACTTCCAGCAACT 60.538 55.000 10.57 0.00 39.61 3.16
2698 3190 2.165167 CAGCAAGATGGGAGCAAAGAA 58.835 47.619 0.00 0.00 0.00 2.52
2701 3193 0.112995 ACCAGCAAGATGGGAGCAAA 59.887 50.000 9.40 0.00 45.25 3.68
2703 3195 0.991146 TAACCAGCAAGATGGGAGCA 59.009 50.000 9.40 0.00 45.25 4.26
2704 3196 2.158696 AGATAACCAGCAAGATGGGAGC 60.159 50.000 9.40 0.00 45.25 4.70
2707 3199 3.889815 TCAAGATAACCAGCAAGATGGG 58.110 45.455 9.40 0.00 45.25 4.00
2708 3200 5.359009 ACAATCAAGATAACCAGCAAGATGG 59.641 40.000 2.25 2.25 46.47 3.51
2709 3201 6.318144 AGACAATCAAGATAACCAGCAAGATG 59.682 38.462 0.00 0.00 0.00 2.90
2710 3202 6.318144 CAGACAATCAAGATAACCAGCAAGAT 59.682 38.462 0.00 0.00 0.00 2.40
2711 3203 5.645067 CAGACAATCAAGATAACCAGCAAGA 59.355 40.000 0.00 0.00 0.00 3.02
2712 3204 5.163683 CCAGACAATCAAGATAACCAGCAAG 60.164 44.000 0.00 0.00 0.00 4.01
2713 3205 4.701651 CCAGACAATCAAGATAACCAGCAA 59.298 41.667 0.00 0.00 0.00 3.91
2714 3206 4.264253 CCAGACAATCAAGATAACCAGCA 58.736 43.478 0.00 0.00 0.00 4.41
2715 3207 3.629398 CCCAGACAATCAAGATAACCAGC 59.371 47.826 0.00 0.00 0.00 4.85
2716 3208 4.878397 GTCCCAGACAATCAAGATAACCAG 59.122 45.833 0.00 0.00 32.09 4.00
2719 3211 6.115446 TGATGTCCCAGACAATCAAGATAAC 58.885 40.000 0.91 0.00 45.96 1.89
2721 3213 5.955961 TGATGTCCCAGACAATCAAGATA 57.044 39.130 0.91 0.00 45.96 1.98
2750 3324 7.867403 GGAAGAACAAGAGATAGAGATGATGAC 59.133 40.741 0.00 0.00 0.00 3.06
2751 3325 7.784073 AGGAAGAACAAGAGATAGAGATGATGA 59.216 37.037 0.00 0.00 0.00 2.92
2752 3326 7.954835 AGGAAGAACAAGAGATAGAGATGATG 58.045 38.462 0.00 0.00 0.00 3.07
2753 3327 7.233348 GGAGGAAGAACAAGAGATAGAGATGAT 59.767 40.741 0.00 0.00 0.00 2.45
2754 3328 6.549364 GGAGGAAGAACAAGAGATAGAGATGA 59.451 42.308 0.00 0.00 0.00 2.92
2755 3329 6.550854 AGGAGGAAGAACAAGAGATAGAGATG 59.449 42.308 0.00 0.00 0.00 2.90
2756 3330 6.682537 AGGAGGAAGAACAAGAGATAGAGAT 58.317 40.000 0.00 0.00 0.00 2.75
2757 3331 6.086011 AGGAGGAAGAACAAGAGATAGAGA 57.914 41.667 0.00 0.00 0.00 3.10
2758 3332 6.406849 CCAAGGAGGAAGAACAAGAGATAGAG 60.407 46.154 0.00 0.00 41.22 2.43
2759 3333 5.423610 CCAAGGAGGAAGAACAAGAGATAGA 59.576 44.000 0.00 0.00 41.22 1.98
2760 3334 5.669477 CCAAGGAGGAAGAACAAGAGATAG 58.331 45.833 0.00 0.00 41.22 2.08
2761 3335 4.080863 GCCAAGGAGGAAGAACAAGAGATA 60.081 45.833 0.00 0.00 41.22 1.98
2762 3336 3.308046 GCCAAGGAGGAAGAACAAGAGAT 60.308 47.826 0.00 0.00 41.22 2.75
2879 3453 2.021355 CAGAGGTGCTCATGAGGAAC 57.979 55.000 23.59 23.59 36.66 3.62
2923 3497 8.796475 AGTCTACAAGTATTTGTGCATTGAAAT 58.204 29.630 13.41 4.25 46.63 2.17
2924 3498 8.075574 CAGTCTACAAGTATTTGTGCATTGAAA 58.924 33.333 13.41 0.00 46.63 2.69
2925 3499 7.443879 TCAGTCTACAAGTATTTGTGCATTGAA 59.556 33.333 13.41 0.00 46.63 2.69
2926 3500 6.934083 TCAGTCTACAAGTATTTGTGCATTGA 59.066 34.615 13.41 8.87 46.63 2.57
2927 3501 7.132694 TCAGTCTACAAGTATTTGTGCATTG 57.867 36.000 13.41 6.98 46.63 2.82
2928 3502 7.928307 ATCAGTCTACAAGTATTTGTGCATT 57.072 32.000 13.41 0.00 46.63 3.56
2929 3503 7.928307 AATCAGTCTACAAGTATTTGTGCAT 57.072 32.000 13.41 0.00 46.63 3.96
2930 3504 9.448438 AATAATCAGTCTACAAGTATTTGTGCA 57.552 29.630 13.41 0.00 46.63 4.57
2939 3513 9.003658 CAAGGTTCAAATAATCAGTCTACAAGT 57.996 33.333 0.00 0.00 0.00 3.16
2940 3514 9.003658 ACAAGGTTCAAATAATCAGTCTACAAG 57.996 33.333 0.00 0.00 0.00 3.16
2941 3515 8.918202 ACAAGGTTCAAATAATCAGTCTACAA 57.082 30.769 0.00 0.00 0.00 2.41
2942 3516 9.653287 CTACAAGGTTCAAATAATCAGTCTACA 57.347 33.333 0.00 0.00 0.00 2.74
2943 3517 9.871238 TCTACAAGGTTCAAATAATCAGTCTAC 57.129 33.333 0.00 0.00 0.00 2.59
2944 3518 9.871238 GTCTACAAGGTTCAAATAATCAGTCTA 57.129 33.333 0.00 0.00 0.00 2.59
2945 3519 8.598041 AGTCTACAAGGTTCAAATAATCAGTCT 58.402 33.333 0.00 0.00 0.00 3.24
2946 3520 8.660373 CAGTCTACAAGGTTCAAATAATCAGTC 58.340 37.037 0.00 0.00 0.00 3.51
2947 3521 7.119846 GCAGTCTACAAGGTTCAAATAATCAGT 59.880 37.037 0.00 0.00 0.00 3.41
2948 3522 7.335422 AGCAGTCTACAAGGTTCAAATAATCAG 59.665 37.037 0.00 0.00 0.00 2.90
2949 3523 7.168219 AGCAGTCTACAAGGTTCAAATAATCA 58.832 34.615 0.00 0.00 0.00 2.57
2950 3524 7.617041 AGCAGTCTACAAGGTTCAAATAATC 57.383 36.000 0.00 0.00 0.00 1.75
2951 3525 9.686683 ATAAGCAGTCTACAAGGTTCAAATAAT 57.313 29.630 0.00 0.00 0.00 1.28
2954 3528 9.686683 AATATAAGCAGTCTACAAGGTTCAAAT 57.313 29.630 0.00 0.00 0.00 2.32
2955 3529 8.946085 CAATATAAGCAGTCTACAAGGTTCAAA 58.054 33.333 0.00 0.00 0.00 2.69
2956 3530 8.318412 TCAATATAAGCAGTCTACAAGGTTCAA 58.682 33.333 0.00 0.00 0.00 2.69
2957 3531 7.847096 TCAATATAAGCAGTCTACAAGGTTCA 58.153 34.615 0.00 0.00 0.00 3.18
2958 3532 8.604890 GTTCAATATAAGCAGTCTACAAGGTTC 58.395 37.037 0.00 0.00 0.00 3.62
2959 3533 8.100791 TGTTCAATATAAGCAGTCTACAAGGTT 58.899 33.333 0.00 0.00 0.00 3.50
2960 3534 7.620880 TGTTCAATATAAGCAGTCTACAAGGT 58.379 34.615 0.00 0.00 0.00 3.50
2961 3535 8.668510 ATGTTCAATATAAGCAGTCTACAAGG 57.331 34.615 0.00 0.00 0.00 3.61
2969 3543 9.520204 GCACAAATAATGTTCAATATAAGCAGT 57.480 29.630 0.00 0.00 41.46 4.40
2970 3544 9.518906 TGCACAAATAATGTTCAATATAAGCAG 57.481 29.630 0.00 0.00 41.46 4.24
2980 3554 8.871862 GCTATTTGAATGCACAAATAATGTTCA 58.128 29.630 18.03 6.70 45.62 3.18
2981 3555 9.090692 AGCTATTTGAATGCACAAATAATGTTC 57.909 29.630 18.03 4.49 45.62 3.18
2982 3556 9.439500 AAGCTATTTGAATGCACAAATAATGTT 57.561 25.926 18.03 11.43 45.62 2.71
2986 3560 9.787532 GAGTAAGCTATTTGAATGCACAAATAA 57.212 29.630 18.03 6.11 45.62 1.40
2987 3561 8.955388 TGAGTAAGCTATTTGAATGCACAAATA 58.045 29.630 17.02 17.02 44.97 1.40
2989 3563 7.040478 ACTGAGTAAGCTATTTGAATGCACAAA 60.040 33.333 5.09 5.09 42.58 2.83
2990 3564 6.430925 ACTGAGTAAGCTATTTGAATGCACAA 59.569 34.615 0.00 0.00 0.00 3.33
2991 3565 5.939883 ACTGAGTAAGCTATTTGAATGCACA 59.060 36.000 0.00 0.00 0.00 4.57
2992 3566 6.428385 ACTGAGTAAGCTATTTGAATGCAC 57.572 37.500 0.00 0.00 0.00 4.57
2993 3567 6.654582 TGAACTGAGTAAGCTATTTGAATGCA 59.345 34.615 0.00 0.00 0.00 3.96
2994 3568 7.076842 TGAACTGAGTAAGCTATTTGAATGC 57.923 36.000 0.00 0.00 0.00 3.56
2997 3571 9.944376 AGTTATGAACTGAGTAAGCTATTTGAA 57.056 29.630 0.00 0.00 41.01 2.69
3013 3587 9.319143 GAGTGCATATAAACTCAGTTATGAACT 57.681 33.333 11.02 11.02 42.01 3.01
3014 3588 9.098355 TGAGTGCATATAAACTCAGTTATGAAC 57.902 33.333 13.17 2.95 45.97 3.18
3024 3598 9.056005 TGATACCATTTGAGTGCATATAAACTC 57.944 33.333 9.15 9.15 42.61 3.01
3025 3599 8.840321 GTGATACCATTTGAGTGCATATAAACT 58.160 33.333 0.00 0.00 0.00 2.66
3026 3600 8.620416 TGTGATACCATTTGAGTGCATATAAAC 58.380 33.333 0.00 0.00 0.00 2.01
3027 3601 8.744568 TGTGATACCATTTGAGTGCATATAAA 57.255 30.769 0.00 0.00 0.00 1.40
3028 3602 7.992608 ACTGTGATACCATTTGAGTGCATATAA 59.007 33.333 0.00 0.00 0.00 0.98
3029 3603 7.508687 ACTGTGATACCATTTGAGTGCATATA 58.491 34.615 0.00 0.00 0.00 0.86
3030 3604 6.359804 ACTGTGATACCATTTGAGTGCATAT 58.640 36.000 0.00 0.00 0.00 1.78
3031 3605 5.744171 ACTGTGATACCATTTGAGTGCATA 58.256 37.500 0.00 0.00 0.00 3.14
3032 3606 4.592942 ACTGTGATACCATTTGAGTGCAT 58.407 39.130 0.00 0.00 0.00 3.96
3033 3607 4.019792 ACTGTGATACCATTTGAGTGCA 57.980 40.909 0.00 0.00 0.00 4.57
3034 3608 4.455533 TGAACTGTGATACCATTTGAGTGC 59.544 41.667 0.00 0.00 0.00 4.40
3035 3609 5.469760 TGTGAACTGTGATACCATTTGAGTG 59.530 40.000 0.00 0.00 0.00 3.51
3036 3610 5.620206 TGTGAACTGTGATACCATTTGAGT 58.380 37.500 0.00 0.00 0.00 3.41
3037 3611 6.558771 TTGTGAACTGTGATACCATTTGAG 57.441 37.500 0.00 0.00 0.00 3.02
3038 3612 7.148255 GCTATTGTGAACTGTGATACCATTTGA 60.148 37.037 0.00 0.00 0.00 2.69
3039 3613 6.968904 GCTATTGTGAACTGTGATACCATTTG 59.031 38.462 0.00 0.00 0.00 2.32
3040 3614 6.658816 TGCTATTGTGAACTGTGATACCATTT 59.341 34.615 0.00 0.00 0.00 2.32
3041 3615 6.179756 TGCTATTGTGAACTGTGATACCATT 58.820 36.000 0.00 0.00 0.00 3.16
3042 3616 5.744171 TGCTATTGTGAACTGTGATACCAT 58.256 37.500 0.00 0.00 0.00 3.55
3043 3617 5.046663 TCTGCTATTGTGAACTGTGATACCA 60.047 40.000 0.00 0.00 0.00 3.25
3044 3618 5.419542 TCTGCTATTGTGAACTGTGATACC 58.580 41.667 0.00 0.00 0.00 2.73
3045 3619 7.545362 AATCTGCTATTGTGAACTGTGATAC 57.455 36.000 0.00 0.00 0.00 2.24
3046 3620 9.481340 GATAATCTGCTATTGTGAACTGTGATA 57.519 33.333 0.00 0.00 0.00 2.15
3047 3621 8.209584 AGATAATCTGCTATTGTGAACTGTGAT 58.790 33.333 0.00 0.00 0.00 3.06
3048 3622 7.559486 AGATAATCTGCTATTGTGAACTGTGA 58.441 34.615 0.00 0.00 0.00 3.58
3049 3623 7.783090 AGATAATCTGCTATTGTGAACTGTG 57.217 36.000 0.00 0.00 0.00 3.66
3106 3680 9.807649 GAACTTCCAGCAACAATATATCATTTT 57.192 29.630 0.00 0.00 0.00 1.82
3107 3681 9.193806 AGAACTTCCAGCAACAATATATCATTT 57.806 29.630 0.00 0.00 0.00 2.32
3108 3682 8.757982 AGAACTTCCAGCAACAATATATCATT 57.242 30.769 0.00 0.00 0.00 2.57
3109 3683 8.757982 AAGAACTTCCAGCAACAATATATCAT 57.242 30.769 0.00 0.00 0.00 2.45
3110 3684 7.011389 CGAAGAACTTCCAGCAACAATATATCA 59.989 37.037 8.66 0.00 36.27 2.15
3111 3685 7.224753 TCGAAGAACTTCCAGCAACAATATATC 59.775 37.037 8.66 0.00 36.27 1.63
3112 3686 7.047891 TCGAAGAACTTCCAGCAACAATATAT 58.952 34.615 8.66 0.00 36.27 0.86
3113 3687 6.403049 TCGAAGAACTTCCAGCAACAATATA 58.597 36.000 8.66 0.00 36.27 0.86
3114 3688 5.245531 TCGAAGAACTTCCAGCAACAATAT 58.754 37.500 8.66 0.00 36.27 1.28
3115 3689 4.637276 TCGAAGAACTTCCAGCAACAATA 58.363 39.130 8.66 0.00 36.27 1.90
3116 3690 3.476552 TCGAAGAACTTCCAGCAACAAT 58.523 40.909 8.66 0.00 36.27 2.71
3117 3691 2.912771 TCGAAGAACTTCCAGCAACAA 58.087 42.857 8.66 0.00 36.27 2.83
3118 3692 2.613026 TCGAAGAACTTCCAGCAACA 57.387 45.000 8.66 0.00 36.27 3.33
3119 3693 4.489679 AAATCGAAGAACTTCCAGCAAC 57.510 40.909 8.66 0.00 43.58 4.17
3120 3694 5.305585 ACTAAATCGAAGAACTTCCAGCAA 58.694 37.500 8.66 0.00 43.58 3.91
3121 3695 4.894784 ACTAAATCGAAGAACTTCCAGCA 58.105 39.130 8.66 0.00 43.58 4.41
3122 3696 5.179555 ACAACTAAATCGAAGAACTTCCAGC 59.820 40.000 8.66 0.00 43.58 4.85
3123 3697 6.787085 ACAACTAAATCGAAGAACTTCCAG 57.213 37.500 8.66 0.00 43.58 3.86
3124 3698 8.092068 TCATACAACTAAATCGAAGAACTTCCA 58.908 33.333 8.66 0.00 43.58 3.53
3125 3699 8.475331 TCATACAACTAAATCGAAGAACTTCC 57.525 34.615 8.66 0.00 43.58 3.46
3152 3726 8.969260 ATGATTGATGTGTATACAGTGTGAAT 57.031 30.769 5.62 1.51 40.79 2.57
3153 3727 8.791327 AATGATTGATGTGTATACAGTGTGAA 57.209 30.769 5.62 0.00 40.79 3.18
3154 3728 8.791327 AAATGATTGATGTGTATACAGTGTGA 57.209 30.769 5.62 0.00 40.79 3.58
3155 3729 9.844790 AAAAATGATTGATGTGTATACAGTGTG 57.155 29.630 5.62 0.00 40.79 3.82
3178 3752 4.340950 GGAAAGTGATGTCCCAGACAAAAA 59.659 41.667 0.91 0.00 45.96 1.94
3179 3753 3.888930 GGAAAGTGATGTCCCAGACAAAA 59.111 43.478 0.91 0.00 45.96 2.44
3180 3754 3.486383 GGAAAGTGATGTCCCAGACAAA 58.514 45.455 0.91 0.00 45.96 2.83
3181 3755 2.549992 CGGAAAGTGATGTCCCAGACAA 60.550 50.000 0.91 0.00 45.96 3.18
3182 3756 1.001974 CGGAAAGTGATGTCCCAGACA 59.998 52.381 0.00 0.00 46.90 3.41
3183 3757 1.002087 ACGGAAAGTGATGTCCCAGAC 59.998 52.381 0.00 0.00 0.00 3.51
3184 3758 1.275291 GACGGAAAGTGATGTCCCAGA 59.725 52.381 0.00 0.00 0.00 3.86
3185 3759 1.676014 GGACGGAAAGTGATGTCCCAG 60.676 57.143 0.00 0.00 44.06 4.45
3186 3760 0.323629 GGACGGAAAGTGATGTCCCA 59.676 55.000 0.00 0.00 44.06 4.37
3187 3761 3.154589 GGACGGAAAGTGATGTCCC 57.845 57.895 0.00 0.00 44.06 4.46
3189 3763 2.743636 TGAGGACGGAAAGTGATGTC 57.256 50.000 0.00 0.00 0.00 3.06
3190 3764 2.834549 AGATGAGGACGGAAAGTGATGT 59.165 45.455 0.00 0.00 0.00 3.06
3191 3765 3.131933 AGAGATGAGGACGGAAAGTGATG 59.868 47.826 0.00 0.00 0.00 3.07
3192 3766 3.370104 AGAGATGAGGACGGAAAGTGAT 58.630 45.455 0.00 0.00 0.00 3.06
3193 3767 2.808919 AGAGATGAGGACGGAAAGTGA 58.191 47.619 0.00 0.00 0.00 3.41
3194 3768 3.601443 AAGAGATGAGGACGGAAAGTG 57.399 47.619 0.00 0.00 0.00 3.16
3195 3769 3.835395 AGAAAGAGATGAGGACGGAAAGT 59.165 43.478 0.00 0.00 0.00 2.66
3196 3770 4.159506 AGAGAAAGAGATGAGGACGGAAAG 59.840 45.833 0.00 0.00 0.00 2.62
3197 3771 4.090090 AGAGAAAGAGATGAGGACGGAAA 58.910 43.478 0.00 0.00 0.00 3.13
3198 3772 3.702792 AGAGAAAGAGATGAGGACGGAA 58.297 45.455 0.00 0.00 0.00 4.30
3199 3773 3.374042 AGAGAAAGAGATGAGGACGGA 57.626 47.619 0.00 0.00 0.00 4.69
3200 3774 3.194542 ACAAGAGAAAGAGATGAGGACGG 59.805 47.826 0.00 0.00 0.00 4.79
3201 3775 4.448537 ACAAGAGAAAGAGATGAGGACG 57.551 45.455 0.00 0.00 0.00 4.79
3202 3776 6.036577 AGAACAAGAGAAAGAGATGAGGAC 57.963 41.667 0.00 0.00 0.00 3.85
3203 3777 6.295575 GGAAGAACAAGAGAAAGAGATGAGGA 60.296 42.308 0.00 0.00 0.00 3.71
3204 3778 5.874261 GGAAGAACAAGAGAAAGAGATGAGG 59.126 44.000 0.00 0.00 0.00 3.86
3205 3779 6.700352 AGGAAGAACAAGAGAAAGAGATGAG 58.300 40.000 0.00 0.00 0.00 2.90
3206 3780 6.571344 CGAGGAAGAACAAGAGAAAGAGATGA 60.571 42.308 0.00 0.00 0.00 2.92
3207 3781 5.576384 CGAGGAAGAACAAGAGAAAGAGATG 59.424 44.000 0.00 0.00 0.00 2.90
3208 3782 5.719173 CGAGGAAGAACAAGAGAAAGAGAT 58.281 41.667 0.00 0.00 0.00 2.75
3209 3783 4.559704 GCGAGGAAGAACAAGAGAAAGAGA 60.560 45.833 0.00 0.00 0.00 3.10
3210 3784 3.677596 GCGAGGAAGAACAAGAGAAAGAG 59.322 47.826 0.00 0.00 0.00 2.85
3211 3785 3.322254 AGCGAGGAAGAACAAGAGAAAGA 59.678 43.478 0.00 0.00 0.00 2.52
3212 3786 3.658709 AGCGAGGAAGAACAAGAGAAAG 58.341 45.455 0.00 0.00 0.00 2.62
3213 3787 3.555168 GGAGCGAGGAAGAACAAGAGAAA 60.555 47.826 0.00 0.00 0.00 2.52
3214 3788 2.028930 GGAGCGAGGAAGAACAAGAGAA 60.029 50.000 0.00 0.00 0.00 2.87
3215 3789 1.546476 GGAGCGAGGAAGAACAAGAGA 59.454 52.381 0.00 0.00 0.00 3.10
3216 3790 1.548269 AGGAGCGAGGAAGAACAAGAG 59.452 52.381 0.00 0.00 0.00 2.85
3217 3791 1.633774 AGGAGCGAGGAAGAACAAGA 58.366 50.000 0.00 0.00 0.00 3.02
3218 3792 2.464157 AAGGAGCGAGGAAGAACAAG 57.536 50.000 0.00 0.00 0.00 3.16
3219 3793 2.233922 CCTAAGGAGCGAGGAAGAACAA 59.766 50.000 0.00 0.00 34.46 2.83
3220 3794 1.825474 CCTAAGGAGCGAGGAAGAACA 59.175 52.381 0.00 0.00 34.46 3.18
3221 3795 1.471851 GCCTAAGGAGCGAGGAAGAAC 60.472 57.143 0.00 0.00 34.46 3.01
3222 3796 0.824759 GCCTAAGGAGCGAGGAAGAA 59.175 55.000 0.00 0.00 34.46 2.52
3223 3797 0.324368 TGCCTAAGGAGCGAGGAAGA 60.324 55.000 0.00 0.00 34.46 2.87
3224 3798 0.755686 ATGCCTAAGGAGCGAGGAAG 59.244 55.000 0.00 0.00 34.46 3.46
3225 3799 1.964223 CTATGCCTAAGGAGCGAGGAA 59.036 52.381 0.00 0.00 34.46 3.36
3226 3800 1.145119 TCTATGCCTAAGGAGCGAGGA 59.855 52.381 0.00 0.00 34.46 3.71
3227 3801 1.621992 TCTATGCCTAAGGAGCGAGG 58.378 55.000 0.00 0.00 35.78 4.63
3228 3802 3.735237 TTTCTATGCCTAAGGAGCGAG 57.265 47.619 0.00 0.00 0.00 5.03
3229 3803 5.801531 TTATTTCTATGCCTAAGGAGCGA 57.198 39.130 0.00 0.00 0.00 4.93
3230 3804 7.254590 GCATATTATTTCTATGCCTAAGGAGCG 60.255 40.741 4.36 0.00 43.61 5.03
3231 3805 7.924940 GCATATTATTTCTATGCCTAAGGAGC 58.075 38.462 4.36 0.00 43.61 4.70
3259 3833 9.533253 CATTTGTCCTAAAATAAAGCCTAATGG 57.467 33.333 0.00 0.00 0.00 3.16
3262 3836 9.747898 TCTCATTTGTCCTAAAATAAAGCCTAA 57.252 29.630 0.00 0.00 0.00 2.69
3263 3837 9.747898 TTCTCATTTGTCCTAAAATAAAGCCTA 57.252 29.630 0.00 0.00 0.00 3.93
3264 3838 8.650143 TTCTCATTTGTCCTAAAATAAAGCCT 57.350 30.769 0.00 0.00 0.00 4.58
3265 3839 9.305925 CATTCTCATTTGTCCTAAAATAAAGCC 57.694 33.333 0.00 0.00 0.00 4.35
3269 3843 8.181573 GCGTCATTCTCATTTGTCCTAAAATAA 58.818 33.333 0.00 0.00 0.00 1.40
3270 3844 7.552687 AGCGTCATTCTCATTTGTCCTAAAATA 59.447 33.333 0.00 0.00 0.00 1.40
3271 3845 6.375455 AGCGTCATTCTCATTTGTCCTAAAAT 59.625 34.615 0.00 0.00 0.00 1.82
3272 3846 5.705441 AGCGTCATTCTCATTTGTCCTAAAA 59.295 36.000 0.00 0.00 0.00 1.52
3273 3847 5.122239 CAGCGTCATTCTCATTTGTCCTAAA 59.878 40.000 0.00 0.00 0.00 1.85
3274 3848 4.631377 CAGCGTCATTCTCATTTGTCCTAA 59.369 41.667 0.00 0.00 0.00 2.69
3275 3849 4.081697 TCAGCGTCATTCTCATTTGTCCTA 60.082 41.667 0.00 0.00 0.00 2.94
3276 3850 3.005554 CAGCGTCATTCTCATTTGTCCT 58.994 45.455 0.00 0.00 0.00 3.85
3277 3851 3.002791 TCAGCGTCATTCTCATTTGTCC 58.997 45.455 0.00 0.00 0.00 4.02
3278 3852 4.871993 ATCAGCGTCATTCTCATTTGTC 57.128 40.909 0.00 0.00 0.00 3.18
3279 3853 6.932356 ATTATCAGCGTCATTCTCATTTGT 57.068 33.333 0.00 0.00 0.00 2.83
3280 3854 9.888878 AATAATTATCAGCGTCATTCTCATTTG 57.111 29.630 0.00 0.00 0.00 2.32
3284 3858 9.764363 ACTAAATAATTATCAGCGTCATTCTCA 57.236 29.630 0.00 0.00 0.00 3.27
3289 3863 9.547753 AGACAACTAAATAATTATCAGCGTCAT 57.452 29.630 19.50 10.53 0.00 3.06
3290 3864 8.942338 AGACAACTAAATAATTATCAGCGTCA 57.058 30.769 19.50 0.00 0.00 4.35
3291 3865 9.031360 TGAGACAACTAAATAATTATCAGCGTC 57.969 33.333 0.00 9.28 0.00 5.19
3292 3866 8.818057 GTGAGACAACTAAATAATTATCAGCGT 58.182 33.333 0.00 1.46 0.00 5.07
3293 3867 8.817100 TGTGAGACAACTAAATAATTATCAGCG 58.183 33.333 0.00 0.00 0.00 5.18
3320 3894 9.459640 GTCTACTTTCGTTAGACATATGCAATA 57.540 33.333 1.58 0.00 39.80 1.90
3321 3895 7.979537 TGTCTACTTTCGTTAGACATATGCAAT 59.020 33.333 1.58 0.00 43.44 3.56
3322 3896 7.317390 TGTCTACTTTCGTTAGACATATGCAA 58.683 34.615 1.58 0.00 43.44 4.08
3323 3897 6.859017 TGTCTACTTTCGTTAGACATATGCA 58.141 36.000 1.58 0.00 43.44 3.96
3324 3898 7.751047 TTGTCTACTTTCGTTAGACATATGC 57.249 36.000 11.88 0.00 46.31 3.14
3326 3900 8.870879 GCTTTTGTCTACTTTCGTTAGACATAT 58.129 33.333 11.88 0.00 46.31 1.78
3327 3901 8.086522 AGCTTTTGTCTACTTTCGTTAGACATA 58.913 33.333 11.88 5.97 46.31 2.29
3328 3902 6.929606 AGCTTTTGTCTACTTTCGTTAGACAT 59.070 34.615 11.88 0.00 46.31 3.06
3329 3903 6.278363 AGCTTTTGTCTACTTTCGTTAGACA 58.722 36.000 7.90 7.90 45.69 3.41
3330 3904 6.766452 AGCTTTTGTCTACTTTCGTTAGAC 57.234 37.500 3.08 3.08 40.29 2.59
3331 3905 6.982141 TGAAGCTTTTGTCTACTTTCGTTAGA 59.018 34.615 0.00 0.00 0.00 2.10
3332 3906 7.064064 GTGAAGCTTTTGTCTACTTTCGTTAG 58.936 38.462 0.00 0.00 0.00 2.34
3333 3907 6.535865 TGTGAAGCTTTTGTCTACTTTCGTTA 59.464 34.615 0.00 0.00 0.00 3.18
3334 3908 5.353123 TGTGAAGCTTTTGTCTACTTTCGTT 59.647 36.000 0.00 0.00 0.00 3.85
3335 3909 4.873827 TGTGAAGCTTTTGTCTACTTTCGT 59.126 37.500 0.00 0.00 0.00 3.85
3336 3910 5.403897 TGTGAAGCTTTTGTCTACTTTCG 57.596 39.130 0.00 0.00 0.00 3.46
3337 3911 7.041780 TCAGATGTGAAGCTTTTGTCTACTTTC 60.042 37.037 0.00 0.00 0.00 2.62
3338 3912 6.767902 TCAGATGTGAAGCTTTTGTCTACTTT 59.232 34.615 0.00 0.00 0.00 2.66
3339 3913 6.203723 GTCAGATGTGAAGCTTTTGTCTACTT 59.796 38.462 0.00 0.00 33.27 2.24
3340 3914 5.698545 GTCAGATGTGAAGCTTTTGTCTACT 59.301 40.000 0.00 0.00 33.27 2.57
3341 3915 5.466728 TGTCAGATGTGAAGCTTTTGTCTAC 59.533 40.000 0.00 3.55 33.27 2.59
3342 3916 5.466728 GTGTCAGATGTGAAGCTTTTGTCTA 59.533 40.000 0.00 0.00 33.27 2.59
3343 3917 4.274459 GTGTCAGATGTGAAGCTTTTGTCT 59.726 41.667 0.00 0.00 33.27 3.41
3344 3918 4.035558 TGTGTCAGATGTGAAGCTTTTGTC 59.964 41.667 0.00 0.00 33.27 3.18
3345 3919 3.947196 TGTGTCAGATGTGAAGCTTTTGT 59.053 39.130 0.00 0.00 33.27 2.83
3346 3920 4.556942 TGTGTCAGATGTGAAGCTTTTG 57.443 40.909 0.00 0.00 33.27 2.44
3347 3921 4.641989 ACTTGTGTCAGATGTGAAGCTTTT 59.358 37.500 0.00 0.00 33.27 2.27
3348 3922 4.202441 ACTTGTGTCAGATGTGAAGCTTT 58.798 39.130 0.00 0.00 33.27 3.51
3349 3923 3.813443 ACTTGTGTCAGATGTGAAGCTT 58.187 40.909 0.00 0.00 33.27 3.74
3350 3924 3.482156 ACTTGTGTCAGATGTGAAGCT 57.518 42.857 0.00 0.00 33.27 3.74
3351 3925 7.923344 AGTATATACTTGTGTCAGATGTGAAGC 59.077 37.037 9.71 0.00 30.41 3.86
3352 3926 9.809096 AAGTATATACTTGTGTCAGATGTGAAG 57.191 33.333 24.17 0.00 44.30 3.02
3375 3949 9.924650 CGGTAGGATAATAACTGCTTATTAAGT 57.075 33.333 5.38 0.00 38.01 2.24
3378 3952 9.305555 ACTCGGTAGGATAATAACTGCTTATTA 57.694 33.333 1.84 1.84 38.58 0.98
3379 3953 8.191534 ACTCGGTAGGATAATAACTGCTTATT 57.808 34.615 0.00 0.00 36.65 1.40
3380 3954 7.778185 ACTCGGTAGGATAATAACTGCTTAT 57.222 36.000 0.00 0.00 0.00 1.73
3381 3955 7.431249 CAACTCGGTAGGATAATAACTGCTTA 58.569 38.462 0.00 0.00 0.00 3.09
3382 3956 6.281405 CAACTCGGTAGGATAATAACTGCTT 58.719 40.000 0.00 0.00 0.00 3.91
3383 3957 5.739358 GCAACTCGGTAGGATAATAACTGCT 60.739 44.000 0.00 0.00 0.00 4.24
3384 3958 4.448060 GCAACTCGGTAGGATAATAACTGC 59.552 45.833 0.00 0.00 0.00 4.40
3385 3959 5.462398 GTGCAACTCGGTAGGATAATAACTG 59.538 44.000 0.00 0.00 0.00 3.16
3386 3960 5.598769 GTGCAACTCGGTAGGATAATAACT 58.401 41.667 0.00 0.00 0.00 2.24
3387 3961 5.902051 GTGCAACTCGGTAGGATAATAAC 57.098 43.478 0.00 0.00 0.00 1.89


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.