Multiple sequence alignment - TraesCS1D01G058300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G058300 chr1D 100.000 4572 0 0 351 4922 38549079 38553650 0.000000e+00 8444
1 TraesCS1D01G058300 chr1D 87.735 2397 137 54 2216 4535 236805536 236807852 0.000000e+00 2652
2 TraesCS1D01G058300 chr1D 85.559 644 69 13 1512 2149 236804911 236805536 0.000000e+00 652
3 TraesCS1D01G058300 chr1D 84.000 475 42 21 797 1246 236803050 236803515 4.550000e-115 425
4 TraesCS1D01G058300 chr1D 97.436 156 3 1 4768 4922 208111452 208111607 1.050000e-66 265
5 TraesCS1D01G058300 chr1D 76.845 393 24 27 406 767 236802589 236802945 5.100000e-35 159
6 TraesCS1D01G058300 chr1D 100.000 74 0 0 1 74 38548729 38548802 2.390000e-28 137
7 TraesCS1D01G058300 chr1B 92.126 3086 133 53 1258 4285 58322107 58325140 0.000000e+00 4252
8 TraesCS1D01G058300 chr1B 87.777 2389 151 61 2216 4535 342115892 342118208 0.000000e+00 2663
9 TraesCS1D01G058300 chr1B 88.445 926 40 31 351 1246 58321127 58322015 0.000000e+00 1055
10 TraesCS1D01G058300 chr1B 88.180 643 55 12 1507 2149 342115271 342115892 0.000000e+00 747
11 TraesCS1D01G058300 chr1B 84.167 480 26 25 806 1246 342114118 342114586 2.120000e-113 420
12 TraesCS1D01G058300 chr1B 84.701 268 16 8 1308 1566 342114934 342115185 1.370000e-60 244
13 TraesCS1D01G058300 chr1A 92.175 3016 131 27 1329 4300 37478950 37481904 0.000000e+00 4165
14 TraesCS1D01G058300 chr1A 89.742 2057 126 41 2216 4232 308814593 308812582 0.000000e+00 2551
15 TraesCS1D01G058300 chr1A 82.842 915 34 42 368 1245 37477972 37478800 0.000000e+00 706
16 TraesCS1D01G058300 chr1A 86.957 644 61 11 1507 2149 308815214 308814593 0.000000e+00 702
17 TraesCS1D01G058300 chr1A 95.522 335 15 0 4434 4768 37499078 37499412 2.020000e-148 536
18 TraesCS1D01G058300 chr1A 86.040 351 24 13 912 1244 308816165 308815822 2.180000e-93 353
19 TraesCS1D01G058300 chr1A 84.513 226 11 7 1350 1566 308815502 308815292 8.350000e-48 202
20 TraesCS1D01G058300 chr1A 98.182 110 2 0 4286 4395 37489611 37489720 5.030000e-45 193
21 TraesCS1D01G058300 chr1A 94.366 71 3 1 4231 4301 308812543 308812474 1.870000e-19 108
22 TraesCS1D01G058300 chr7A 84.844 1511 200 22 2408 3909 80853680 80852190 0.000000e+00 1495
23 TraesCS1D01G058300 chr7A 83.448 145 16 4 1098 1235 80854273 80854130 1.440000e-25 128
24 TraesCS1D01G058300 chr7B 84.350 1508 213 16 2408 3909 23442137 23440647 0.000000e+00 1456
25 TraesCS1D01G058300 chr7B 78.319 226 31 12 1025 1238 23442823 23442604 4.000000e-26 130
26 TraesCS1D01G058300 chr7D 83.786 1511 216 20 2408 3909 76733267 76731777 0.000000e+00 1406
27 TraesCS1D01G058300 chr7D 94.643 168 4 3 4759 4922 621851437 621851603 6.320000e-64 255
28 TraesCS1D01G058300 chr7D 93.197 147 10 0 4773 4919 543333856 543334002 2.980000e-52 217
29 TraesCS1D01G058300 chr7D 79.295 227 29 12 1025 1238 76733927 76733706 5.140000e-30 143
30 TraesCS1D01G058300 chr5D 92.050 239 19 0 4530 4768 414057331 414057093 2.190000e-88 337
31 TraesCS1D01G058300 chr5D 92.667 150 11 0 4773 4922 495168166 495168017 2.980000e-52 217
32 TraesCS1D01G058300 chr5D 90.566 159 15 0 4761 4919 286181288 286181446 1.390000e-50 211
33 TraesCS1D01G058300 chr6D 86.192 239 32 1 4530 4768 339399526 339399763 1.760000e-64 257
34 TraesCS1D01G058300 chr6D 91.837 147 12 0 4775 4921 9538268 9538414 6.460000e-49 206
35 TraesCS1D01G058300 chr3D 93.333 150 10 0 4773 4922 62349983 62349834 6.410000e-54 222
36 TraesCS1D01G058300 chr4B 92.568 148 8 3 4775 4920 671731340 671731486 4.990000e-50 209
37 TraesCS1D01G058300 chr6B 89.933 149 14 1 4775 4922 17491553 17491701 1.810000e-44 191


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G058300 chr1D 38548729 38553650 4921 False 4290.5 8444 100.00000 1 4922 2 chr1D.!!$F2 4921
1 TraesCS1D01G058300 chr1D 236802589 236807852 5263 False 972.0 2652 83.53475 406 4535 4 chr1D.!!$F3 4129
2 TraesCS1D01G058300 chr1B 58321127 58325140 4013 False 2653.5 4252 90.28550 351 4285 2 chr1B.!!$F1 3934
3 TraesCS1D01G058300 chr1B 342114118 342118208 4090 False 1018.5 2663 86.20625 806 4535 4 chr1B.!!$F2 3729
4 TraesCS1D01G058300 chr1A 37477972 37481904 3932 False 2435.5 4165 87.50850 368 4300 2 chr1A.!!$F3 3932
5 TraesCS1D01G058300 chr1A 308812474 308816165 3691 True 783.2 2551 88.32360 912 4301 5 chr1A.!!$R1 3389
6 TraesCS1D01G058300 chr7A 80852190 80854273 2083 True 811.5 1495 84.14600 1098 3909 2 chr7A.!!$R1 2811
7 TraesCS1D01G058300 chr7B 23440647 23442823 2176 True 793.0 1456 81.33450 1025 3909 2 chr7B.!!$R1 2884
8 TraesCS1D01G058300 chr7D 76731777 76733927 2150 True 774.5 1406 81.54050 1025 3909 2 chr7D.!!$R1 2884

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
885 1057 0.108756 GCGGCCGTATAAGGATCTCC 60.109 60.0 28.70 0.08 0.00 3.71 F
1246 1496 1.145900 TCCCCCTCCTCCAATTTGCA 61.146 55.0 0.00 0.00 0.00 4.08 F
1926 3727 0.317436 CAGCTCCATCTAGTCGACGC 60.317 60.0 10.46 4.76 0.00 5.19 F
3288 5150 0.386113 GGCCTCTCACGGAGATGTAC 59.614 60.0 0.00 0.00 44.45 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1926 3727 0.742281 CTCATGAGCAAGGGTCACCG 60.742 60.000 10.38 0.0 42.86 4.94 R
3135 4997 0.819582 ATTTTCCCATCTTGCCAGCG 59.180 50.000 0.00 0.0 0.00 5.18 R
3507 5369 1.228154 ACGGTCTTCCTTGTTGGCC 60.228 57.895 0.00 0.0 35.26 5.36 R
4733 6705 0.035056 GGATATGGCCGATCCCAAGG 60.035 60.000 21.10 0.0 38.61 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.310538 AGGAGGACAAAGCTTTTGTGG 58.689 47.619 9.53 0.33 31.96 4.17
21 22 2.091885 AGGAGGACAAAGCTTTTGTGGA 60.092 45.455 9.53 0.00 31.96 4.02
22 23 2.893489 GGAGGACAAAGCTTTTGTGGAT 59.107 45.455 9.53 0.31 31.96 3.41
23 24 3.057245 GGAGGACAAAGCTTTTGTGGATC 60.057 47.826 9.53 8.37 31.96 3.36
24 25 3.823304 GAGGACAAAGCTTTTGTGGATCT 59.177 43.478 9.53 6.22 31.96 2.75
25 26 4.218312 AGGACAAAGCTTTTGTGGATCTT 58.782 39.130 9.53 0.00 31.96 2.40
26 27 4.038402 AGGACAAAGCTTTTGTGGATCTTG 59.962 41.667 9.53 0.00 31.96 3.02
27 28 4.301628 GACAAAGCTTTTGTGGATCTTGG 58.698 43.478 9.53 0.00 31.96 3.61
28 29 3.070015 ACAAAGCTTTTGTGGATCTTGGG 59.930 43.478 9.53 0.00 0.00 4.12
29 30 2.683211 AGCTTTTGTGGATCTTGGGT 57.317 45.000 0.00 0.00 0.00 4.51
30 31 2.519013 AGCTTTTGTGGATCTTGGGTC 58.481 47.619 0.00 0.00 0.00 4.46
31 32 2.158475 AGCTTTTGTGGATCTTGGGTCA 60.158 45.455 0.00 0.00 0.00 4.02
32 33 2.229784 GCTTTTGTGGATCTTGGGTCAG 59.770 50.000 0.00 0.00 0.00 3.51
33 34 1.909700 TTTGTGGATCTTGGGTCAGC 58.090 50.000 0.00 0.00 0.00 4.26
34 35 0.770499 TTGTGGATCTTGGGTCAGCA 59.230 50.000 0.00 0.00 0.00 4.41
35 36 0.994247 TGTGGATCTTGGGTCAGCAT 59.006 50.000 0.00 0.00 0.00 3.79
36 37 1.065199 TGTGGATCTTGGGTCAGCATC 60.065 52.381 0.00 0.00 0.00 3.91
37 38 1.211457 GTGGATCTTGGGTCAGCATCT 59.789 52.381 0.00 0.00 0.00 2.90
38 39 1.918262 TGGATCTTGGGTCAGCATCTT 59.082 47.619 0.00 0.00 0.00 2.40
39 40 2.309755 TGGATCTTGGGTCAGCATCTTT 59.690 45.455 0.00 0.00 0.00 2.52
40 41 2.948315 GGATCTTGGGTCAGCATCTTTC 59.052 50.000 0.00 0.00 0.00 2.62
41 42 3.371380 GGATCTTGGGTCAGCATCTTTCT 60.371 47.826 0.00 0.00 0.00 2.52
42 43 3.795688 TCTTGGGTCAGCATCTTTCTT 57.204 42.857 0.00 0.00 0.00 2.52
43 44 3.415212 TCTTGGGTCAGCATCTTTCTTG 58.585 45.455 0.00 0.00 0.00 3.02
44 45 3.072915 TCTTGGGTCAGCATCTTTCTTGA 59.927 43.478 0.00 0.00 0.00 3.02
45 46 3.726557 TGGGTCAGCATCTTTCTTGAT 57.273 42.857 0.00 0.00 0.00 2.57
46 47 3.349927 TGGGTCAGCATCTTTCTTGATG 58.650 45.455 0.00 0.00 44.72 3.07
47 48 3.245016 TGGGTCAGCATCTTTCTTGATGT 60.245 43.478 6.40 0.00 44.02 3.06
48 49 3.376546 GGGTCAGCATCTTTCTTGATGTC 59.623 47.826 6.40 0.35 44.02 3.06
49 50 4.005650 GGTCAGCATCTTTCTTGATGTCA 58.994 43.478 6.40 0.00 44.02 3.58
50 51 4.142730 GGTCAGCATCTTTCTTGATGTCAC 60.143 45.833 6.40 1.90 44.02 3.67
51 52 4.453478 GTCAGCATCTTTCTTGATGTCACA 59.547 41.667 6.40 0.00 44.02 3.58
52 53 4.453478 TCAGCATCTTTCTTGATGTCACAC 59.547 41.667 6.40 0.00 44.02 3.82
53 54 3.434641 AGCATCTTTCTTGATGTCACACG 59.565 43.478 6.40 0.00 44.02 4.49
54 55 3.187227 GCATCTTTCTTGATGTCACACGT 59.813 43.478 6.40 0.00 44.02 4.49
55 56 4.319766 GCATCTTTCTTGATGTCACACGTT 60.320 41.667 6.40 0.00 44.02 3.99
56 57 5.751680 CATCTTTCTTGATGTCACACGTTT 58.248 37.500 0.00 0.00 39.05 3.60
57 58 6.565811 GCATCTTTCTTGATGTCACACGTTTA 60.566 38.462 6.40 0.00 44.02 2.01
58 59 6.912203 TCTTTCTTGATGTCACACGTTTAA 57.088 33.333 0.00 0.00 0.00 1.52
59 60 7.310072 TCTTTCTTGATGTCACACGTTTAAA 57.690 32.000 0.00 0.00 0.00 1.52
60 61 7.925993 TCTTTCTTGATGTCACACGTTTAAAT 58.074 30.769 0.00 0.00 0.00 1.40
61 62 8.402472 TCTTTCTTGATGTCACACGTTTAAATT 58.598 29.630 0.00 0.00 0.00 1.82
62 63 7.906611 TTCTTGATGTCACACGTTTAAATTG 57.093 32.000 0.00 0.00 0.00 2.32
63 64 7.022055 TCTTGATGTCACACGTTTAAATTGT 57.978 32.000 0.00 0.00 0.00 2.71
64 65 7.129622 TCTTGATGTCACACGTTTAAATTGTC 58.870 34.615 3.14 0.00 0.00 3.18
65 66 6.612247 TGATGTCACACGTTTAAATTGTCT 57.388 33.333 3.14 0.00 0.00 3.41
66 67 6.426327 TGATGTCACACGTTTAAATTGTCTG 58.574 36.000 3.14 0.00 0.00 3.51
67 68 5.804692 TGTCACACGTTTAAATTGTCTGT 57.195 34.783 3.14 0.00 0.00 3.41
68 69 5.564768 TGTCACACGTTTAAATTGTCTGTG 58.435 37.500 3.14 5.56 0.00 3.66
69 70 5.122554 TGTCACACGTTTAAATTGTCTGTGT 59.877 36.000 3.14 3.92 39.46 3.72
70 71 5.848207 CACACGTTTAAATTGTCTGTGTG 57.152 39.130 13.34 13.34 46.31 3.82
71 72 5.328691 CACACGTTTAAATTGTCTGTGTGT 58.671 37.500 16.70 8.90 46.33 3.72
72 73 5.797934 CACACGTTTAAATTGTCTGTGTGTT 59.202 36.000 16.70 0.00 46.33 3.32
73 74 5.797934 ACACGTTTAAATTGTCTGTGTGTTG 59.202 36.000 0.00 0.00 37.66 3.33
384 385 4.090588 GATTGTGACCGCCGGGGA 62.091 66.667 21.95 0.00 39.97 4.81
597 632 1.143183 GTCGCAGCGATAAGGGGAA 59.857 57.895 22.72 0.00 38.42 3.97
767 820 2.414824 GCGCATTACAAAATTCGTCCCA 60.415 45.455 0.30 0.00 34.72 4.37
768 821 3.425404 CGCATTACAAAATTCGTCCCAG 58.575 45.455 0.00 0.00 28.78 4.45
769 822 3.126171 CGCATTACAAAATTCGTCCCAGA 59.874 43.478 0.00 0.00 28.78 3.86
770 823 4.662145 GCATTACAAAATTCGTCCCAGAG 58.338 43.478 0.00 0.00 0.00 3.35
771 824 4.394920 GCATTACAAAATTCGTCCCAGAGA 59.605 41.667 0.00 0.00 0.00 3.10
772 825 5.447818 GCATTACAAAATTCGTCCCAGAGAG 60.448 44.000 0.00 0.00 0.00 3.20
776 829 2.890847 AATTCGTCCCAGAGAGCGCG 62.891 60.000 0.00 0.00 0.00 6.86
885 1057 0.108756 GCGGCCGTATAAGGATCTCC 60.109 60.000 28.70 0.08 0.00 3.71
1246 1496 1.145900 TCCCCCTCCTCCAATTTGCA 61.146 55.000 0.00 0.00 0.00 4.08
1277 1820 2.421073 GTGAGCACATGCAGCATTCTTA 59.579 45.455 4.69 0.00 45.16 2.10
1282 1825 1.747355 ACATGCAGCATTCTTACAGGC 59.253 47.619 4.69 0.00 0.00 4.85
1380 2961 5.059833 GGACTTGGAGATTGTGTGATATCC 58.940 45.833 0.00 0.00 37.81 2.59
1445 3035 3.921021 CGCAAGTTCTAGTGGTAACTGAG 59.079 47.826 0.00 0.00 37.19 3.35
1587 3362 4.265073 CTGCCTACCTGACTAAAATTGCT 58.735 43.478 0.00 0.00 0.00 3.91
1714 3502 7.810759 GGTTCTCTTTGTTGTTTTGTTCTGTAA 59.189 33.333 0.00 0.00 0.00 2.41
1715 3503 9.353999 GTTCTCTTTGTTGTTTTGTTCTGTAAT 57.646 29.630 0.00 0.00 0.00 1.89
1776 3565 7.848051 CGAAGTATGCAATTACTTGATTCAGAC 59.152 37.037 15.69 0.92 41.36 3.51
1781 3570 7.601073 TGCAATTACTTGATTCAGACTGTAG 57.399 36.000 1.59 0.00 34.04 2.74
1795 3584 2.162608 GACTGTAGATGTGTGCGACTCT 59.837 50.000 0.00 0.00 0.00 3.24
1926 3727 0.317436 CAGCTCCATCTAGTCGACGC 60.317 60.000 10.46 4.76 0.00 5.19
2176 3980 2.027003 AGCAGAGCTCTTGCATCTTC 57.973 50.000 28.21 8.58 42.74 2.87
2177 3981 1.555992 AGCAGAGCTCTTGCATCTTCT 59.444 47.619 28.21 12.47 42.74 2.85
2195 3999 6.391227 TCTTCTGTGCTTAAAAAGGGAAAG 57.609 37.500 0.00 0.00 0.00 2.62
2359 4175 9.202273 GTTATGGTGATTTGCATTCAAACTTAA 57.798 29.630 1.74 5.10 44.11 1.85
2419 4249 7.642071 ATTTGCAGTATGTGACAATGTTTTC 57.358 32.000 0.00 0.00 39.31 2.29
2420 4250 6.389830 TTGCAGTATGTGACAATGTTTTCT 57.610 33.333 0.00 0.00 39.31 2.52
2634 4464 6.272090 TGGAGATATATGTGGTGGCTTTATCA 59.728 38.462 0.00 0.00 0.00 2.15
2684 4514 2.304180 ACTGGATGTCAAAGGTGAGAGG 59.696 50.000 0.00 0.00 33.27 3.69
2685 4515 2.568956 CTGGATGTCAAAGGTGAGAGGA 59.431 50.000 0.00 0.00 33.27 3.71
2686 4516 2.568956 TGGATGTCAAAGGTGAGAGGAG 59.431 50.000 0.00 0.00 33.27 3.69
2687 4517 2.834549 GGATGTCAAAGGTGAGAGGAGA 59.165 50.000 0.00 0.00 33.27 3.71
2688 4518 3.118811 GGATGTCAAAGGTGAGAGGAGAG 60.119 52.174 0.00 0.00 33.27 3.20
2704 4539 4.464008 AGGAGAGTCAAATGCTTGTTTGA 58.536 39.130 7.93 7.93 43.66 2.69
2705 4540 4.889409 AGGAGAGTCAAATGCTTGTTTGAA 59.111 37.500 11.99 0.00 46.31 2.69
2752 4606 3.599343 AGAGCGCAGTATTGTCAATGAA 58.401 40.909 11.47 0.00 0.00 2.57
2871 4733 1.503542 GCGCCATCTGTTTGAGGTG 59.496 57.895 0.00 0.00 31.77 4.00
2934 4796 5.751243 TCCTTGCTCAAGTTAAACAAGTC 57.249 39.130 8.60 0.00 36.78 3.01
3135 4997 2.692041 AGCTAGGATGCTTTTGATTGGC 59.308 45.455 0.00 0.00 40.93 4.52
3288 5150 0.386113 GGCCTCTCACGGAGATGTAC 59.614 60.000 0.00 0.00 44.45 2.90
3333 5195 0.953727 TGTTCACAAGCACAGCATCC 59.046 50.000 0.00 0.00 0.00 3.51
3444 5306 3.864686 CCAAGGAATGTCGGCGCG 61.865 66.667 0.00 0.00 0.00 6.86
3492 5354 2.537730 GGTATACAACGTCGACGACCTC 60.538 54.545 41.52 22.61 43.02 3.85
3507 5369 3.944476 CCTCAAAGAGGTGGTGGAG 57.056 57.895 4.89 0.00 44.25 3.86
4034 5909 2.300152 TCCTCCACTTACTGCTGAGTTG 59.700 50.000 0.00 0.00 33.21 3.16
4138 6034 0.886490 AGTTACTGTGGCTGCTGTGC 60.886 55.000 0.00 0.00 0.00 4.57
4312 6276 2.928731 GCTCGGTCTGACTCCTTTCTTG 60.929 54.545 7.85 0.00 0.00 3.02
4322 6286 5.470368 TGACTCCTTTCTTGAGTGTTATCG 58.530 41.667 0.00 0.00 42.94 2.92
4333 6297 1.135083 AGTGTTATCGGGAGCGTTCAG 60.135 52.381 0.53 0.00 0.00 3.02
4334 6298 1.135199 GTGTTATCGGGAGCGTTCAGA 60.135 52.381 0.53 0.14 0.00 3.27
4339 6303 0.389817 TCGGGAGCGTTCAGATGTTG 60.390 55.000 0.53 0.00 0.00 3.33
4376 6348 4.921515 CCAAAGTTGCTCAATGATCAGTTG 59.078 41.667 0.09 6.55 0.00 3.16
4387 6359 3.126001 TGATCAGTTGGCCGATTATCC 57.874 47.619 0.00 0.00 0.00 2.59
4395 6367 4.526650 AGTTGGCCGATTATCCTTTTGTTT 59.473 37.500 0.00 0.00 0.00 2.83
4396 6368 5.011635 AGTTGGCCGATTATCCTTTTGTTTT 59.988 36.000 0.00 0.00 0.00 2.43
4397 6369 5.476091 TGGCCGATTATCCTTTTGTTTTT 57.524 34.783 0.00 0.00 0.00 1.94
4427 6399 9.778741 AAGAATCGCCAGAATATATTACTCAAA 57.221 29.630 0.00 0.00 0.00 2.69
4428 6400 9.429359 AGAATCGCCAGAATATATTACTCAAAG 57.571 33.333 0.00 0.00 0.00 2.77
4429 6401 9.209175 GAATCGCCAGAATATATTACTCAAAGT 57.791 33.333 0.00 0.00 0.00 2.66
4430 6402 7.946655 TCGCCAGAATATATTACTCAAAGTG 57.053 36.000 0.00 0.00 0.00 3.16
4431 6403 6.929049 TCGCCAGAATATATTACTCAAAGTGG 59.071 38.462 0.00 0.00 0.00 4.00
4448 6420 2.632512 AGTGGGCCTAACAATTTTGGTG 59.367 45.455 4.53 0.00 30.79 4.17
4452 6424 3.398406 GGCCTAACAATTTTGGTGGTTG 58.602 45.455 0.00 0.00 30.79 3.77
4469 6441 2.158827 GGTTGTTGGAATTTGGCAAGGT 60.159 45.455 0.00 0.00 0.00 3.50
4470 6442 3.540617 GTTGTTGGAATTTGGCAAGGTT 58.459 40.909 0.00 0.00 0.00 3.50
4471 6443 3.922171 TGTTGGAATTTGGCAAGGTTT 57.078 38.095 0.00 0.00 0.00 3.27
4472 6444 4.227864 TGTTGGAATTTGGCAAGGTTTT 57.772 36.364 0.00 0.00 0.00 2.43
4473 6445 5.359194 TGTTGGAATTTGGCAAGGTTTTA 57.641 34.783 0.00 0.00 0.00 1.52
4500 6472 3.023119 TGGTGGCGAATTTGCATCTTAT 58.977 40.909 19.31 0.00 36.28 1.73
4501 6473 3.066621 TGGTGGCGAATTTGCATCTTATC 59.933 43.478 19.31 0.74 36.28 1.75
4502 6474 3.316308 GGTGGCGAATTTGCATCTTATCT 59.684 43.478 19.31 0.00 36.28 1.98
4503 6475 4.202050 GGTGGCGAATTTGCATCTTATCTT 60.202 41.667 19.31 0.00 36.28 2.40
4504 6476 5.008613 GGTGGCGAATTTGCATCTTATCTTA 59.991 40.000 19.31 0.00 36.28 2.10
4520 6492 8.057536 TCTTATCTTAGGTCTTGTTCTCTGTC 57.942 38.462 0.00 0.00 0.00 3.51
4535 6507 2.029964 GTCCGGCGACCAAGACAA 59.970 61.111 9.30 0.00 32.40 3.18
4536 6508 2.027625 GTCCGGCGACCAAGACAAG 61.028 63.158 9.30 0.00 32.40 3.16
4537 6509 2.204461 TCCGGCGACCAAGACAAGA 61.204 57.895 9.30 0.00 0.00 3.02
4538 6510 1.301401 CCGGCGACCAAGACAAGAA 60.301 57.895 9.30 0.00 0.00 2.52
4539 6511 1.566018 CCGGCGACCAAGACAAGAAC 61.566 60.000 9.30 0.00 0.00 3.01
4540 6512 0.878523 CGGCGACCAAGACAAGAACA 60.879 55.000 0.00 0.00 0.00 3.18
4541 6513 1.305201 GGCGACCAAGACAAGAACAA 58.695 50.000 0.00 0.00 0.00 2.83
4542 6514 1.002792 GGCGACCAAGACAAGAACAAC 60.003 52.381 0.00 0.00 0.00 3.32
4543 6515 1.002792 GCGACCAAGACAAGAACAACC 60.003 52.381 0.00 0.00 0.00 3.77
4544 6516 2.285083 CGACCAAGACAAGAACAACCA 58.715 47.619 0.00 0.00 0.00 3.67
4545 6517 2.878406 CGACCAAGACAAGAACAACCAT 59.122 45.455 0.00 0.00 0.00 3.55
4546 6518 3.303990 CGACCAAGACAAGAACAACCATG 60.304 47.826 0.00 0.00 0.00 3.66
4547 6519 2.362077 ACCAAGACAAGAACAACCATGC 59.638 45.455 0.00 0.00 0.00 4.06
4548 6520 2.605338 CCAAGACAAGAACAACCATGCG 60.605 50.000 0.00 0.00 0.00 4.73
4549 6521 2.254546 AGACAAGAACAACCATGCGA 57.745 45.000 0.00 0.00 0.00 5.10
4550 6522 2.783135 AGACAAGAACAACCATGCGAT 58.217 42.857 0.00 0.00 0.00 4.58
4551 6523 2.744202 AGACAAGAACAACCATGCGATC 59.256 45.455 0.00 0.00 0.00 3.69
4552 6524 2.483877 GACAAGAACAACCATGCGATCA 59.516 45.455 0.00 0.00 0.00 2.92
4553 6525 2.884012 ACAAGAACAACCATGCGATCAA 59.116 40.909 0.00 0.00 0.00 2.57
4554 6526 3.507233 ACAAGAACAACCATGCGATCAAT 59.493 39.130 0.00 0.00 0.00 2.57
4555 6527 4.699735 ACAAGAACAACCATGCGATCAATA 59.300 37.500 0.00 0.00 0.00 1.90
4556 6528 5.163723 ACAAGAACAACCATGCGATCAATAG 60.164 40.000 0.00 0.00 0.00 1.73
4557 6529 3.879295 AGAACAACCATGCGATCAATAGG 59.121 43.478 0.00 0.00 0.00 2.57
4558 6530 3.558931 ACAACCATGCGATCAATAGGA 57.441 42.857 0.00 0.00 0.00 2.94
4559 6531 3.470709 ACAACCATGCGATCAATAGGAG 58.529 45.455 0.00 0.00 0.00 3.69
4560 6532 2.810274 CAACCATGCGATCAATAGGAGG 59.190 50.000 0.00 0.00 0.00 4.30
4561 6533 2.329267 ACCATGCGATCAATAGGAGGA 58.671 47.619 0.00 0.00 0.00 3.71
4562 6534 2.909006 ACCATGCGATCAATAGGAGGAT 59.091 45.455 0.00 0.00 0.00 3.24
4563 6535 3.055530 ACCATGCGATCAATAGGAGGATC 60.056 47.826 0.00 0.00 37.22 3.36
4564 6536 3.055602 CCATGCGATCAATAGGAGGATCA 60.056 47.826 0.00 0.00 39.88 2.92
4565 6537 4.383880 CCATGCGATCAATAGGAGGATCAT 60.384 45.833 0.00 0.00 39.88 2.45
4566 6538 4.198028 TGCGATCAATAGGAGGATCATG 57.802 45.455 0.00 0.00 39.88 3.07
4567 6539 3.580022 TGCGATCAATAGGAGGATCATGT 59.420 43.478 0.00 0.00 39.88 3.21
4568 6540 4.180057 GCGATCAATAGGAGGATCATGTC 58.820 47.826 0.00 0.00 39.88 3.06
4569 6541 4.081752 GCGATCAATAGGAGGATCATGTCT 60.082 45.833 0.00 0.00 39.88 3.41
4570 6542 5.649557 CGATCAATAGGAGGATCATGTCTC 58.350 45.833 0.00 0.00 39.88 3.36
4571 6543 5.649557 GATCAATAGGAGGATCATGTCTCG 58.350 45.833 0.00 0.00 39.71 4.04
4572 6544 3.256879 TCAATAGGAGGATCATGTCTCGC 59.743 47.826 0.00 0.00 36.25 5.03
4573 6545 2.666272 TAGGAGGATCATGTCTCGCT 57.334 50.000 0.00 2.28 36.25 4.93
4574 6546 1.786937 AGGAGGATCATGTCTCGCTT 58.213 50.000 0.00 0.00 36.25 4.68
4575 6547 2.114616 AGGAGGATCATGTCTCGCTTT 58.885 47.619 0.00 0.00 36.25 3.51
4576 6548 2.102252 AGGAGGATCATGTCTCGCTTTC 59.898 50.000 0.00 0.00 36.25 2.62
4577 6549 2.123342 GAGGATCATGTCTCGCTTTCG 58.877 52.381 0.00 0.00 33.17 3.46
4578 6550 1.202463 AGGATCATGTCTCGCTTTCGG 60.202 52.381 0.00 0.00 36.13 4.30
4579 6551 1.471676 GGATCATGTCTCGCTTTCGGT 60.472 52.381 0.00 0.00 36.13 4.69
4580 6552 1.855360 GATCATGTCTCGCTTTCGGTC 59.145 52.381 0.00 0.00 36.13 4.79
4581 6553 0.108804 TCATGTCTCGCTTTCGGTCC 60.109 55.000 0.00 0.00 36.13 4.46
4582 6554 0.389817 CATGTCTCGCTTTCGGTCCA 60.390 55.000 0.00 0.00 36.13 4.02
4583 6555 0.537188 ATGTCTCGCTTTCGGTCCAT 59.463 50.000 0.00 0.00 36.13 3.41
4584 6556 0.389817 TGTCTCGCTTTCGGTCCATG 60.390 55.000 0.00 0.00 36.13 3.66
4585 6557 1.447838 TCTCGCTTTCGGTCCATGC 60.448 57.895 0.00 0.00 36.13 4.06
4586 6558 1.448540 CTCGCTTTCGGTCCATGCT 60.449 57.895 0.00 0.00 36.13 3.79
4587 6559 1.699656 CTCGCTTTCGGTCCATGCTG 61.700 60.000 0.00 0.00 36.13 4.41
4588 6560 1.741401 CGCTTTCGGTCCATGCTGA 60.741 57.895 0.00 0.00 0.00 4.26
4589 6561 1.298157 CGCTTTCGGTCCATGCTGAA 61.298 55.000 0.00 0.00 32.46 3.02
4590 6562 1.098050 GCTTTCGGTCCATGCTGAAT 58.902 50.000 0.00 0.00 34.18 2.57
4591 6563 2.288666 GCTTTCGGTCCATGCTGAATA 58.711 47.619 0.00 0.00 34.18 1.75
4592 6564 2.289002 GCTTTCGGTCCATGCTGAATAG 59.711 50.000 0.00 0.00 34.18 1.73
4593 6565 3.797039 CTTTCGGTCCATGCTGAATAGA 58.203 45.455 0.00 0.00 34.18 1.98
4594 6566 2.890808 TCGGTCCATGCTGAATAGAC 57.109 50.000 0.00 0.00 0.00 2.59
4595 6567 2.388735 TCGGTCCATGCTGAATAGACT 58.611 47.619 0.00 0.00 28.73 3.24
4596 6568 2.362397 TCGGTCCATGCTGAATAGACTC 59.638 50.000 0.00 0.00 28.73 3.36
4597 6569 2.748605 GGTCCATGCTGAATAGACTCG 58.251 52.381 0.00 0.00 28.73 4.18
4598 6570 2.362397 GGTCCATGCTGAATAGACTCGA 59.638 50.000 0.00 0.00 28.73 4.04
4599 6571 3.181475 GGTCCATGCTGAATAGACTCGAA 60.181 47.826 0.00 0.00 28.73 3.71
4600 6572 4.502259 GGTCCATGCTGAATAGACTCGAAT 60.502 45.833 0.00 0.00 28.73 3.34
4601 6573 5.053145 GTCCATGCTGAATAGACTCGAATT 58.947 41.667 0.00 0.00 0.00 2.17
4602 6574 5.050499 GTCCATGCTGAATAGACTCGAATTG 60.050 44.000 0.00 0.00 0.00 2.32
4603 6575 5.052481 CCATGCTGAATAGACTCGAATTGA 58.948 41.667 0.00 0.00 0.00 2.57
4604 6576 5.525012 CCATGCTGAATAGACTCGAATTGAA 59.475 40.000 0.00 0.00 0.00 2.69
4605 6577 6.292757 CCATGCTGAATAGACTCGAATTGAAG 60.293 42.308 0.00 0.00 0.00 3.02
4606 6578 5.111989 TGCTGAATAGACTCGAATTGAAGG 58.888 41.667 0.00 0.00 0.00 3.46
4607 6579 5.105351 TGCTGAATAGACTCGAATTGAAGGA 60.105 40.000 0.00 0.00 0.00 3.36
4608 6580 5.461737 GCTGAATAGACTCGAATTGAAGGAG 59.538 44.000 0.00 0.00 0.00 3.69
4609 6581 5.907207 TGAATAGACTCGAATTGAAGGAGG 58.093 41.667 0.00 0.00 32.11 4.30
4610 6582 5.422331 TGAATAGACTCGAATTGAAGGAGGT 59.578 40.000 0.00 0.00 32.11 3.85
4611 6583 3.601443 AGACTCGAATTGAAGGAGGTG 57.399 47.619 0.00 0.00 32.11 4.00
4612 6584 2.900546 AGACTCGAATTGAAGGAGGTGT 59.099 45.455 0.00 0.00 32.11 4.16
4613 6585 4.087182 AGACTCGAATTGAAGGAGGTGTA 58.913 43.478 0.00 0.00 32.11 2.90
4614 6586 4.082136 AGACTCGAATTGAAGGAGGTGTAC 60.082 45.833 0.00 0.00 32.11 2.90
4615 6587 3.056035 ACTCGAATTGAAGGAGGTGTACC 60.056 47.826 0.00 0.00 32.11 3.34
4626 6598 1.636148 AGGTGTACCTTAACGGCAGA 58.364 50.000 0.00 0.00 46.09 4.26
4627 6599 1.972795 AGGTGTACCTTAACGGCAGAA 59.027 47.619 0.00 0.00 46.09 3.02
4628 6600 2.028385 AGGTGTACCTTAACGGCAGAAG 60.028 50.000 0.00 0.00 46.09 2.85
4629 6601 2.028748 GGTGTACCTTAACGGCAGAAGA 60.029 50.000 0.00 0.00 35.61 2.87
4630 6602 3.369157 GGTGTACCTTAACGGCAGAAGAT 60.369 47.826 0.00 0.00 35.61 2.40
4631 6603 4.142093 GGTGTACCTTAACGGCAGAAGATA 60.142 45.833 0.00 0.00 35.61 1.98
4632 6604 4.802563 GTGTACCTTAACGGCAGAAGATAC 59.197 45.833 0.00 0.00 35.61 2.24
4633 6605 4.463539 TGTACCTTAACGGCAGAAGATACA 59.536 41.667 0.00 0.00 35.61 2.29
4634 6606 3.858247 ACCTTAACGGCAGAAGATACAC 58.142 45.455 0.00 0.00 35.61 2.90
4635 6607 3.195661 CCTTAACGGCAGAAGATACACC 58.804 50.000 0.00 0.00 0.00 4.16
4636 6608 3.118738 CCTTAACGGCAGAAGATACACCT 60.119 47.826 0.00 0.00 0.00 4.00
4637 6609 2.386661 AACGGCAGAAGATACACCTG 57.613 50.000 0.00 0.00 0.00 4.00
4638 6610 0.537188 ACGGCAGAAGATACACCTGG 59.463 55.000 0.00 0.00 0.00 4.45
4639 6611 0.537188 CGGCAGAAGATACACCTGGT 59.463 55.000 0.00 0.00 0.00 4.00
4640 6612 1.471676 CGGCAGAAGATACACCTGGTC 60.472 57.143 0.00 0.00 0.00 4.02
4641 6613 1.134371 GGCAGAAGATACACCTGGTCC 60.134 57.143 0.00 0.00 0.00 4.46
4642 6614 1.555075 GCAGAAGATACACCTGGTCCA 59.445 52.381 0.00 0.00 0.00 4.02
4643 6615 2.027192 GCAGAAGATACACCTGGTCCAA 60.027 50.000 0.00 0.00 0.00 3.53
4644 6616 3.600388 CAGAAGATACACCTGGTCCAAC 58.400 50.000 0.00 0.00 0.00 3.77
4645 6617 2.572104 AGAAGATACACCTGGTCCAACC 59.428 50.000 0.00 0.00 39.22 3.77
4654 6626 3.351416 GGTCCAACCAACGACGGC 61.351 66.667 0.00 0.00 38.42 5.68
4655 6627 2.280592 GTCCAACCAACGACGGCT 60.281 61.111 0.00 0.00 0.00 5.52
4656 6628 1.890510 GTCCAACCAACGACGGCTT 60.891 57.895 0.00 0.00 0.00 4.35
4657 6629 1.890041 TCCAACCAACGACGGCTTG 60.890 57.895 0.00 0.00 0.00 4.01
4658 6630 2.051345 CAACCAACGACGGCTTGC 60.051 61.111 0.00 0.00 0.00 4.01
4659 6631 3.284449 AACCAACGACGGCTTGCC 61.284 61.111 0.00 0.75 0.00 4.52
4660 6632 4.555709 ACCAACGACGGCTTGCCA 62.556 61.111 12.45 0.00 0.00 4.92
4661 6633 4.025401 CCAACGACGGCTTGCCAC 62.025 66.667 12.45 4.34 0.00 5.01
4662 6634 2.972505 CAACGACGGCTTGCCACT 60.973 61.111 12.45 0.00 0.00 4.00
4663 6635 2.665185 AACGACGGCTTGCCACTC 60.665 61.111 12.45 4.56 0.00 3.51
4664 6636 3.165160 AACGACGGCTTGCCACTCT 62.165 57.895 12.45 0.00 0.00 3.24
4665 6637 3.114616 CGACGGCTTGCCACTCTG 61.115 66.667 12.45 0.00 0.00 3.35
4666 6638 2.743928 GACGGCTTGCCACTCTGG 60.744 66.667 12.45 0.00 41.55 3.86
4667 6639 3.240134 GACGGCTTGCCACTCTGGA 62.240 63.158 12.45 0.00 40.96 3.86
4668 6640 2.435586 CGGCTTGCCACTCTGGAG 60.436 66.667 12.45 0.00 40.96 3.86
4669 6641 2.947532 CGGCTTGCCACTCTGGAGA 61.948 63.158 12.45 0.00 40.96 3.71
4670 6642 1.376466 GGCTTGCCACTCTGGAGAA 59.624 57.895 6.79 0.00 40.96 2.87
4671 6643 0.250901 GGCTTGCCACTCTGGAGAAA 60.251 55.000 6.79 0.00 40.96 2.52
4672 6644 1.609208 GCTTGCCACTCTGGAGAAAA 58.391 50.000 4.49 0.00 40.96 2.29
4673 6645 2.165998 GCTTGCCACTCTGGAGAAAAT 58.834 47.619 4.49 0.00 40.96 1.82
4674 6646 2.560105 GCTTGCCACTCTGGAGAAAATT 59.440 45.455 4.49 0.00 40.96 1.82
4675 6647 3.613432 GCTTGCCACTCTGGAGAAAATTG 60.613 47.826 4.49 0.00 40.96 2.32
4676 6648 3.507162 TGCCACTCTGGAGAAAATTGA 57.493 42.857 4.49 0.00 40.96 2.57
4677 6649 3.149196 TGCCACTCTGGAGAAAATTGAC 58.851 45.455 4.49 0.00 40.96 3.18
4678 6650 2.489722 GCCACTCTGGAGAAAATTGACC 59.510 50.000 4.49 0.00 40.96 4.02
4679 6651 3.754965 CCACTCTGGAGAAAATTGACCA 58.245 45.455 4.49 0.00 40.96 4.02
4680 6652 4.338879 CCACTCTGGAGAAAATTGACCAT 58.661 43.478 4.49 0.00 40.96 3.55
4681 6653 4.157289 CCACTCTGGAGAAAATTGACCATG 59.843 45.833 4.49 0.00 40.96 3.66
4682 6654 4.763793 CACTCTGGAGAAAATTGACCATGT 59.236 41.667 4.49 0.00 0.00 3.21
4683 6655 4.763793 ACTCTGGAGAAAATTGACCATGTG 59.236 41.667 4.49 0.00 0.00 3.21
4684 6656 4.728772 TCTGGAGAAAATTGACCATGTGT 58.271 39.130 0.00 0.00 0.00 3.72
4685 6657 5.139727 TCTGGAGAAAATTGACCATGTGTT 58.860 37.500 0.00 0.00 0.00 3.32
4686 6658 6.303054 TCTGGAGAAAATTGACCATGTGTTA 58.697 36.000 0.00 0.00 0.00 2.41
4687 6659 6.947733 TCTGGAGAAAATTGACCATGTGTTAT 59.052 34.615 0.00 0.00 0.00 1.89
4688 6660 7.121168 TCTGGAGAAAATTGACCATGTGTTATC 59.879 37.037 0.00 0.00 0.00 1.75
4689 6661 6.128035 TGGAGAAAATTGACCATGTGTTATCG 60.128 38.462 0.00 0.00 0.00 2.92
4690 6662 6.093495 GGAGAAAATTGACCATGTGTTATCGA 59.907 38.462 0.00 0.00 0.00 3.59
4691 6663 6.842163 AGAAAATTGACCATGTGTTATCGAC 58.158 36.000 0.00 0.00 0.00 4.20
4692 6664 4.857871 AATTGACCATGTGTTATCGACG 57.142 40.909 0.00 0.00 0.00 5.12
4693 6665 3.579335 TTGACCATGTGTTATCGACGA 57.421 42.857 0.00 0.00 0.00 4.20
4694 6666 3.579335 TGACCATGTGTTATCGACGAA 57.421 42.857 0.00 0.00 0.00 3.85
4695 6667 3.247442 TGACCATGTGTTATCGACGAAC 58.753 45.455 0.00 0.00 0.00 3.95
4696 6668 2.256174 ACCATGTGTTATCGACGAACG 58.744 47.619 0.00 0.00 44.09 3.95
4704 6676 3.991999 TCGACGAACGACTGGGAT 58.008 55.556 0.00 0.00 46.45 3.85
4705 6677 1.504900 TCGACGAACGACTGGGATG 59.495 57.895 0.00 0.00 46.45 3.51
4706 6678 0.956902 TCGACGAACGACTGGGATGA 60.957 55.000 0.00 0.00 46.45 2.92
4707 6679 0.100682 CGACGAACGACTGGGATGAT 59.899 55.000 0.14 0.00 45.77 2.45
4708 6680 1.841450 GACGAACGACTGGGATGATC 58.159 55.000 0.14 0.00 0.00 2.92
4709 6681 1.405821 GACGAACGACTGGGATGATCT 59.594 52.381 0.14 0.00 0.00 2.75
4710 6682 1.405821 ACGAACGACTGGGATGATCTC 59.594 52.381 0.14 0.00 0.00 2.75
4711 6683 1.269309 CGAACGACTGGGATGATCTCC 60.269 57.143 0.00 0.00 44.11 3.71
4712 6684 1.757118 GAACGACTGGGATGATCTCCA 59.243 52.381 11.73 7.81 46.98 3.86
4713 6685 1.115467 ACGACTGGGATGATCTCCAC 58.885 55.000 11.73 0.00 46.98 4.02
4714 6686 0.390860 CGACTGGGATGATCTCCACC 59.609 60.000 11.73 2.45 46.98 4.61
4715 6687 0.761802 GACTGGGATGATCTCCACCC 59.238 60.000 11.73 10.40 46.98 4.61
4716 6688 0.695803 ACTGGGATGATCTCCACCCC 60.696 60.000 11.73 0.00 46.98 4.95
4717 6689 0.401105 CTGGGATGATCTCCACCCCT 60.401 60.000 11.73 0.00 46.98 4.79
4718 6690 0.400525 TGGGATGATCTCCACCCCTC 60.401 60.000 11.73 0.00 46.98 4.30
4719 6691 1.130678 GGGATGATCTCCACCCCTCC 61.131 65.000 11.73 0.00 46.98 4.30
4720 6692 0.104725 GGATGATCTCCACCCCTCCT 60.105 60.000 6.39 0.00 44.26 3.69
4721 6693 1.055040 GATGATCTCCACCCCTCCTG 58.945 60.000 0.00 0.00 0.00 3.86
4722 6694 1.059006 ATGATCTCCACCCCTCCTGC 61.059 60.000 0.00 0.00 0.00 4.85
4723 6695 1.383803 GATCTCCACCCCTCCTGCT 60.384 63.158 0.00 0.00 0.00 4.24
4724 6696 0.985490 GATCTCCACCCCTCCTGCTT 60.985 60.000 0.00 0.00 0.00 3.91
4725 6697 0.551131 ATCTCCACCCCTCCTGCTTT 60.551 55.000 0.00 0.00 0.00 3.51
4726 6698 1.201429 TCTCCACCCCTCCTGCTTTC 61.201 60.000 0.00 0.00 0.00 2.62
4727 6699 1.151810 TCCACCCCTCCTGCTTTCT 60.152 57.895 0.00 0.00 0.00 2.52
4728 6700 0.118346 TCCACCCCTCCTGCTTTCTA 59.882 55.000 0.00 0.00 0.00 2.10
4729 6701 0.543749 CCACCCCTCCTGCTTTCTAG 59.456 60.000 0.00 0.00 0.00 2.43
4730 6702 0.543749 CACCCCTCCTGCTTTCTAGG 59.456 60.000 0.00 0.00 36.63 3.02
4731 6703 0.417841 ACCCCTCCTGCTTTCTAGGA 59.582 55.000 0.00 0.00 41.91 2.94
4735 6707 3.719939 TCCTGCTTTCTAGGAGCCT 57.280 52.632 13.99 0.00 39.36 4.58
4736 6708 1.958288 TCCTGCTTTCTAGGAGCCTT 58.042 50.000 13.99 0.00 39.36 4.35
4737 6709 1.556911 TCCTGCTTTCTAGGAGCCTTG 59.443 52.381 13.99 0.00 39.36 3.61
4738 6710 1.407989 CCTGCTTTCTAGGAGCCTTGG 60.408 57.143 13.99 10.50 38.43 3.61
4739 6711 0.620556 TGCTTTCTAGGAGCCTTGGG 59.379 55.000 13.99 0.00 39.38 4.12
4740 6712 0.912486 GCTTTCTAGGAGCCTTGGGA 59.088 55.000 7.54 0.00 34.06 4.37
4741 6713 1.492599 GCTTTCTAGGAGCCTTGGGAT 59.507 52.381 7.54 0.00 34.06 3.85
4742 6714 2.486370 GCTTTCTAGGAGCCTTGGGATC 60.486 54.545 7.54 0.00 37.39 3.36
4743 6715 1.414158 TTCTAGGAGCCTTGGGATCG 58.586 55.000 0.00 0.00 39.27 3.69
4744 6716 0.470080 TCTAGGAGCCTTGGGATCGG 60.470 60.000 0.00 0.00 39.27 4.18
4745 6717 2.105806 CTAGGAGCCTTGGGATCGGC 62.106 65.000 1.37 1.37 46.65 5.54
4749 6721 2.836154 GCCTTGGGATCGGCCATA 59.164 61.111 2.24 0.00 40.43 2.74
4750 6722 1.380302 GCCTTGGGATCGGCCATAT 59.620 57.895 2.24 0.00 40.43 1.78
4751 6723 0.678048 GCCTTGGGATCGGCCATATC 60.678 60.000 2.24 4.89 40.43 1.63
4752 6724 0.035056 CCTTGGGATCGGCCATATCC 60.035 60.000 21.18 21.18 41.96 2.59
4761 6733 2.257353 GGCCATATCCGACCATTGC 58.743 57.895 0.00 0.00 0.00 3.56
4762 6734 1.244019 GGCCATATCCGACCATTGCC 61.244 60.000 0.00 0.00 0.00 4.52
4763 6735 1.244019 GCCATATCCGACCATTGCCC 61.244 60.000 0.00 0.00 0.00 5.36
4764 6736 0.955428 CCATATCCGACCATTGCCCG 60.955 60.000 0.00 0.00 0.00 6.13
4765 6737 0.250295 CATATCCGACCATTGCCCGT 60.250 55.000 0.00 0.00 0.00 5.28
4766 6738 0.472471 ATATCCGACCATTGCCCGTT 59.528 50.000 0.00 0.00 0.00 4.44
4767 6739 0.462937 TATCCGACCATTGCCCGTTG 60.463 55.000 0.00 0.00 0.00 4.10
4768 6740 3.439540 CCGACCATTGCCCGTTGG 61.440 66.667 0.00 0.00 39.02 3.77
4780 6752 4.188702 CGTTGGGACGCGGATTTA 57.811 55.556 12.47 0.00 43.03 1.40
4781 6753 2.685364 CGTTGGGACGCGGATTTAT 58.315 52.632 12.47 0.00 43.03 1.40
4782 6754 1.855513 CGTTGGGACGCGGATTTATA 58.144 50.000 12.47 0.00 43.03 0.98
4783 6755 2.203401 CGTTGGGACGCGGATTTATAA 58.797 47.619 12.47 0.00 43.03 0.98
4784 6756 2.608546 CGTTGGGACGCGGATTTATAAA 59.391 45.455 12.47 0.00 43.03 1.40
4785 6757 3.302870 CGTTGGGACGCGGATTTATAAAG 60.303 47.826 12.47 0.00 43.03 1.85
4786 6758 2.215196 TGGGACGCGGATTTATAAAGC 58.785 47.619 12.47 4.86 0.00 3.51
4787 6759 2.158871 TGGGACGCGGATTTATAAAGCT 60.159 45.455 12.47 0.00 0.00 3.74
4788 6760 2.479275 GGGACGCGGATTTATAAAGCTC 59.521 50.000 12.47 3.15 0.00 4.09
4789 6761 3.128349 GGACGCGGATTTATAAAGCTCA 58.872 45.455 12.47 0.00 0.00 4.26
4790 6762 3.184581 GGACGCGGATTTATAAAGCTCAG 59.815 47.826 12.47 4.39 0.00 3.35
4791 6763 3.131396 ACGCGGATTTATAAAGCTCAGG 58.869 45.455 12.47 3.80 0.00 3.86
4792 6764 2.096218 CGCGGATTTATAAAGCTCAGGC 60.096 50.000 12.84 10.17 39.06 4.85
4802 6774 4.292784 GCTCAGGCTTCTGGACAC 57.707 61.111 0.00 0.00 38.96 3.67
4803 6775 1.376553 GCTCAGGCTTCTGGACACC 60.377 63.158 0.00 0.00 38.96 4.16
4804 6776 1.835927 GCTCAGGCTTCTGGACACCT 61.836 60.000 0.00 0.00 38.96 4.00
4805 6777 0.248843 CTCAGGCTTCTGGACACCTC 59.751 60.000 0.00 0.00 38.96 3.85
4806 6778 1.194781 TCAGGCTTCTGGACACCTCC 61.195 60.000 0.00 0.00 38.96 4.30
4807 6779 1.159664 AGGCTTCTGGACACCTCCT 59.840 57.895 0.00 0.00 37.48 3.69
4808 6780 0.413832 AGGCTTCTGGACACCTCCTA 59.586 55.000 0.00 0.00 37.48 2.94
4809 6781 1.008938 AGGCTTCTGGACACCTCCTAT 59.991 52.381 0.00 0.00 37.48 2.57
4810 6782 1.414550 GGCTTCTGGACACCTCCTATC 59.585 57.143 0.00 0.00 37.48 2.08
4811 6783 1.414550 GCTTCTGGACACCTCCTATCC 59.585 57.143 0.00 0.00 37.48 2.59
4812 6784 2.752030 CTTCTGGACACCTCCTATCCA 58.248 52.381 0.00 0.00 40.27 3.41
4813 6785 3.312890 CTTCTGGACACCTCCTATCCAT 58.687 50.000 0.00 0.00 41.65 3.41
4814 6786 4.483950 CTTCTGGACACCTCCTATCCATA 58.516 47.826 0.00 0.00 41.65 2.74
4815 6787 3.845860 TCTGGACACCTCCTATCCATAC 58.154 50.000 0.00 0.00 41.65 2.39
4816 6788 2.900546 CTGGACACCTCCTATCCATACC 59.099 54.545 0.00 0.00 41.65 2.73
4817 6789 2.258109 GGACACCTCCTATCCATACCC 58.742 57.143 0.00 0.00 33.07 3.69
4818 6790 2.158143 GGACACCTCCTATCCATACCCT 60.158 54.545 0.00 0.00 33.07 4.34
4819 6791 3.077088 GGACACCTCCTATCCATACCCTA 59.923 52.174 0.00 0.00 33.07 3.53
4820 6792 4.087907 GACACCTCCTATCCATACCCTAC 58.912 52.174 0.00 0.00 0.00 3.18
4821 6793 3.469771 ACACCTCCTATCCATACCCTACA 59.530 47.826 0.00 0.00 0.00 2.74
4822 6794 4.078219 ACACCTCCTATCCATACCCTACAA 60.078 45.833 0.00 0.00 0.00 2.41
4823 6795 5.094387 CACCTCCTATCCATACCCTACAAT 58.906 45.833 0.00 0.00 0.00 2.71
4824 6796 5.046304 CACCTCCTATCCATACCCTACAATG 60.046 48.000 0.00 0.00 0.00 2.82
4825 6797 5.094387 CCTCCTATCCATACCCTACAATGT 58.906 45.833 0.00 0.00 0.00 2.71
4826 6798 5.548056 CCTCCTATCCATACCCTACAATGTT 59.452 44.000 0.00 0.00 0.00 2.71
4827 6799 6.433847 TCCTATCCATACCCTACAATGTTG 57.566 41.667 0.00 0.00 0.00 3.33
4828 6800 5.003804 CCTATCCATACCCTACAATGTTGC 58.996 45.833 0.00 0.00 0.00 4.17
4829 6801 4.796110 ATCCATACCCTACAATGTTGCT 57.204 40.909 0.00 0.00 0.00 3.91
4830 6802 4.584638 TCCATACCCTACAATGTTGCTT 57.415 40.909 0.00 0.00 0.00 3.91
4831 6803 4.929479 TCCATACCCTACAATGTTGCTTT 58.071 39.130 0.00 0.00 0.00 3.51
4832 6804 6.068461 TCCATACCCTACAATGTTGCTTTA 57.932 37.500 0.00 0.00 0.00 1.85
4833 6805 6.486056 TCCATACCCTACAATGTTGCTTTAA 58.514 36.000 0.00 0.00 0.00 1.52
4834 6806 6.601613 TCCATACCCTACAATGTTGCTTTAAG 59.398 38.462 0.00 0.00 0.00 1.85
4835 6807 6.601613 CCATACCCTACAATGTTGCTTTAAGA 59.398 38.462 0.00 0.00 0.00 2.10
4836 6808 7.285401 CCATACCCTACAATGTTGCTTTAAGAT 59.715 37.037 0.00 0.00 0.00 2.40
4837 6809 6.759497 ACCCTACAATGTTGCTTTAAGATC 57.241 37.500 0.00 0.00 0.00 2.75
4838 6810 5.652452 ACCCTACAATGTTGCTTTAAGATCC 59.348 40.000 0.00 0.00 0.00 3.36
4839 6811 5.220854 CCCTACAATGTTGCTTTAAGATCCG 60.221 44.000 0.00 0.00 0.00 4.18
4840 6812 5.354234 CCTACAATGTTGCTTTAAGATCCGT 59.646 40.000 0.00 0.00 0.00 4.69
4841 6813 5.046910 ACAATGTTGCTTTAAGATCCGTG 57.953 39.130 0.00 0.00 0.00 4.94
4842 6814 3.764885 ATGTTGCTTTAAGATCCGTGC 57.235 42.857 0.00 0.00 0.00 5.34
4843 6815 2.778299 TGTTGCTTTAAGATCCGTGCT 58.222 42.857 0.00 0.00 0.00 4.40
4844 6816 3.932822 TGTTGCTTTAAGATCCGTGCTA 58.067 40.909 0.00 0.00 0.00 3.49
4845 6817 4.513442 TGTTGCTTTAAGATCCGTGCTAT 58.487 39.130 0.00 0.00 0.00 2.97
4846 6818 5.666462 TGTTGCTTTAAGATCCGTGCTATA 58.334 37.500 0.00 0.00 0.00 1.31
4847 6819 5.522460 TGTTGCTTTAAGATCCGTGCTATAC 59.478 40.000 0.00 0.00 0.00 1.47
4848 6820 5.270893 TGCTTTAAGATCCGTGCTATACA 57.729 39.130 0.00 0.00 0.00 2.29
4849 6821 5.666462 TGCTTTAAGATCCGTGCTATACAA 58.334 37.500 0.00 0.00 0.00 2.41
4850 6822 5.522460 TGCTTTAAGATCCGTGCTATACAAC 59.478 40.000 0.00 0.00 0.00 3.32
4851 6823 5.753921 GCTTTAAGATCCGTGCTATACAACT 59.246 40.000 0.00 0.00 0.00 3.16
4852 6824 6.921857 GCTTTAAGATCCGTGCTATACAACTA 59.078 38.462 0.00 0.00 0.00 2.24
4853 6825 7.437267 GCTTTAAGATCCGTGCTATACAACTAA 59.563 37.037 0.00 0.00 0.00 2.24
4854 6826 8.638685 TTTAAGATCCGTGCTATACAACTAAC 57.361 34.615 0.00 0.00 0.00 2.34
4855 6827 6.466885 AAGATCCGTGCTATACAACTAACT 57.533 37.500 0.00 0.00 0.00 2.24
4856 6828 6.466885 AGATCCGTGCTATACAACTAACTT 57.533 37.500 0.00 0.00 0.00 2.66
4857 6829 6.505272 AGATCCGTGCTATACAACTAACTTC 58.495 40.000 0.00 0.00 0.00 3.01
4858 6830 5.909621 TCCGTGCTATACAACTAACTTCT 57.090 39.130 0.00 0.00 0.00 2.85
4859 6831 6.276832 TCCGTGCTATACAACTAACTTCTT 57.723 37.500 0.00 0.00 0.00 2.52
4860 6832 7.395190 TCCGTGCTATACAACTAACTTCTTA 57.605 36.000 0.00 0.00 0.00 2.10
4861 6833 7.253422 TCCGTGCTATACAACTAACTTCTTAC 58.747 38.462 0.00 0.00 0.00 2.34
4862 6834 7.031372 CCGTGCTATACAACTAACTTCTTACA 58.969 38.462 0.00 0.00 0.00 2.41
4863 6835 7.705325 CCGTGCTATACAACTAACTTCTTACAT 59.295 37.037 0.00 0.00 0.00 2.29
4864 6836 8.744011 CGTGCTATACAACTAACTTCTTACATC 58.256 37.037 0.00 0.00 0.00 3.06
4865 6837 9.582431 GTGCTATACAACTAACTTCTTACATCA 57.418 33.333 0.00 0.00 0.00 3.07
4866 6838 9.803315 TGCTATACAACTAACTTCTTACATCAG 57.197 33.333 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.091885 TCCACAAAAGCTTTGTCCTCCT 60.092 45.455 13.54 0.00 0.00 3.69
1 2 2.306847 TCCACAAAAGCTTTGTCCTCC 58.693 47.619 13.54 0.00 0.00 4.30
2 3 3.823304 AGATCCACAAAAGCTTTGTCCTC 59.177 43.478 13.54 5.66 0.00 3.71
3 4 3.837355 AGATCCACAAAAGCTTTGTCCT 58.163 40.909 13.54 0.00 0.00 3.85
4 5 4.301628 CAAGATCCACAAAAGCTTTGTCC 58.698 43.478 13.54 0.00 0.00 4.02
5 6 4.301628 CCAAGATCCACAAAAGCTTTGTC 58.698 43.478 13.54 4.90 0.00 3.18
6 7 3.070015 CCCAAGATCCACAAAAGCTTTGT 59.930 43.478 13.54 10.20 0.00 2.83
7 8 3.070015 ACCCAAGATCCACAAAAGCTTTG 59.930 43.478 13.54 9.55 0.00 2.77
8 9 3.308401 ACCCAAGATCCACAAAAGCTTT 58.692 40.909 5.69 5.69 0.00 3.51
9 10 2.893489 GACCCAAGATCCACAAAAGCTT 59.107 45.455 0.00 0.00 0.00 3.74
10 11 2.158475 TGACCCAAGATCCACAAAAGCT 60.158 45.455 0.00 0.00 0.00 3.74
11 12 2.229784 CTGACCCAAGATCCACAAAAGC 59.770 50.000 0.00 0.00 0.00 3.51
12 13 2.229784 GCTGACCCAAGATCCACAAAAG 59.770 50.000 0.00 0.00 0.00 2.27
13 14 2.238521 GCTGACCCAAGATCCACAAAA 58.761 47.619 0.00 0.00 0.00 2.44
14 15 1.144708 TGCTGACCCAAGATCCACAAA 59.855 47.619 0.00 0.00 0.00 2.83
15 16 0.770499 TGCTGACCCAAGATCCACAA 59.230 50.000 0.00 0.00 0.00 3.33
16 17 0.994247 ATGCTGACCCAAGATCCACA 59.006 50.000 0.00 0.00 0.00 4.17
17 18 1.211457 AGATGCTGACCCAAGATCCAC 59.789 52.381 0.00 0.00 0.00 4.02
18 19 1.588239 AGATGCTGACCCAAGATCCA 58.412 50.000 0.00 0.00 0.00 3.41
19 20 2.725221 AAGATGCTGACCCAAGATCC 57.275 50.000 0.00 0.00 0.00 3.36
20 21 3.883669 AGAAAGATGCTGACCCAAGATC 58.116 45.455 0.00 0.00 0.00 2.75
21 22 4.015084 CAAGAAAGATGCTGACCCAAGAT 58.985 43.478 0.00 0.00 0.00 2.40
22 23 3.072915 TCAAGAAAGATGCTGACCCAAGA 59.927 43.478 0.00 0.00 0.00 3.02
23 24 3.415212 TCAAGAAAGATGCTGACCCAAG 58.585 45.455 0.00 0.00 0.00 3.61
24 25 3.507162 TCAAGAAAGATGCTGACCCAA 57.493 42.857 0.00 0.00 0.00 4.12
25 26 3.349927 CATCAAGAAAGATGCTGACCCA 58.650 45.455 0.00 0.00 38.98 4.51
34 35 7.490962 TTAAACGTGTGACATCAAGAAAGAT 57.509 32.000 0.00 0.00 0.00 2.40
35 36 6.912203 TTAAACGTGTGACATCAAGAAAGA 57.088 33.333 0.00 0.00 0.00 2.52
36 37 8.471457 CAATTTAAACGTGTGACATCAAGAAAG 58.529 33.333 0.00 0.00 0.00 2.62
37 38 7.971168 ACAATTTAAACGTGTGACATCAAGAAA 59.029 29.630 5.73 0.00 0.00 2.52
38 39 7.476667 ACAATTTAAACGTGTGACATCAAGAA 58.523 30.769 5.73 0.00 0.00 2.52
39 40 7.011950 AGACAATTTAAACGTGTGACATCAAGA 59.988 33.333 10.32 0.00 0.00 3.02
40 41 7.112009 CAGACAATTTAAACGTGTGACATCAAG 59.888 37.037 10.32 0.00 0.00 3.02
41 42 6.909895 CAGACAATTTAAACGTGTGACATCAA 59.090 34.615 10.32 0.00 0.00 2.57
42 43 6.037720 ACAGACAATTTAAACGTGTGACATCA 59.962 34.615 18.28 0.00 0.00 3.07
43 44 6.356977 CACAGACAATTTAAACGTGTGACATC 59.643 38.462 18.28 3.73 36.72 3.06
44 45 6.183360 ACACAGACAATTTAAACGTGTGACAT 60.183 34.615 18.28 5.58 37.76 3.06
45 46 5.122554 ACACAGACAATTTAAACGTGTGACA 59.877 36.000 18.28 0.00 37.76 3.58
46 47 5.565695 ACACAGACAATTTAAACGTGTGAC 58.434 37.500 18.28 4.81 37.76 3.67
47 48 5.804692 ACACAGACAATTTAAACGTGTGA 57.195 34.783 18.28 0.00 37.76 3.58
48 49 5.848207 CACACAGACAATTTAAACGTGTG 57.152 39.130 10.32 11.55 44.48 3.82
49 50 5.554822 ACACACAGACAATTTAAACGTGT 57.445 34.783 6.15 6.15 36.61 4.49
50 51 6.241835 CAACACACAGACAATTTAAACGTG 57.758 37.500 0.00 0.00 0.00 4.49
361 362 1.009903 CGGCGGTCACAATCGTAACA 61.010 55.000 0.00 0.00 0.00 2.41
431 432 4.935495 CGGGGTGATGATGGCCGG 62.935 72.222 0.00 0.00 0.00 6.13
784 837 4.593864 GAGGGACGATGAGCCGGC 62.594 72.222 21.89 21.89 36.70 6.13
786 839 4.271816 CGGAGGGACGATGAGCCG 62.272 72.222 0.00 0.00 35.47 5.52
787 840 2.833582 TCGGAGGGACGATGAGCC 60.834 66.667 0.00 0.00 38.06 4.70
788 841 2.413765 GTCGGAGGGACGATGAGC 59.586 66.667 0.00 0.00 45.47 4.26
851 1013 2.131067 CCGCTTCTCCCTCTCTCCC 61.131 68.421 0.00 0.00 0.00 4.30
1246 1496 3.006003 TGCATGTGCTCACAACAATCAAT 59.994 39.130 6.81 0.00 45.41 2.57
1277 1820 9.540538 AGTAGTAATGATAGATCAATAGCCTGT 57.459 33.333 0.00 0.00 40.69 4.00
1302 1845 7.766278 AGATAGGCTGTGAACACAACTAATTAG 59.234 37.037 11.05 11.05 41.33 1.73
1380 2961 7.112148 GTGCAGAAAAAGAAAACTAATCGACAG 59.888 37.037 0.00 0.00 0.00 3.51
1445 3035 3.567797 GCGCGTGCCTCCAAGATC 61.568 66.667 10.56 0.00 33.98 2.75
1714 3502 1.115467 CAGCGGGAGACTCAGGTTAT 58.885 55.000 4.53 0.00 0.00 1.89
1715 3503 1.605058 GCAGCGGGAGACTCAGGTTA 61.605 60.000 4.53 0.00 0.00 2.85
1716 3504 2.948720 GCAGCGGGAGACTCAGGTT 61.949 63.158 4.53 0.00 0.00 3.50
1776 3565 2.929531 AGAGTCGCACACATCTACAG 57.070 50.000 0.00 0.00 0.00 2.74
1781 3570 3.127203 ACACTAGTAGAGTCGCACACATC 59.873 47.826 3.59 0.00 35.64 3.06
1926 3727 0.742281 CTCATGAGCAAGGGTCACCG 60.742 60.000 10.38 0.00 42.86 4.94
2108 3912 4.036804 GCACAAACCGCCGCATGA 62.037 61.111 0.00 0.00 0.00 3.07
2175 3979 5.420739 ACAACTTTCCCTTTTTAAGCACAGA 59.579 36.000 0.00 0.00 0.00 3.41
2176 3980 5.660460 ACAACTTTCCCTTTTTAAGCACAG 58.340 37.500 0.00 0.00 0.00 3.66
2177 3981 5.669164 ACAACTTTCCCTTTTTAAGCACA 57.331 34.783 0.00 0.00 0.00 4.57
2195 3999 6.442952 TGTTAGCACAAATCACCATAACAAC 58.557 36.000 0.00 0.00 30.94 3.32
2419 4249 6.884832 TCATGTACCCTGGTAGTGAAAATAG 58.115 40.000 8.25 0.00 0.00 1.73
2420 4250 6.877668 TCATGTACCCTGGTAGTGAAAATA 57.122 37.500 8.25 0.00 0.00 1.40
2634 4464 4.715297 ACTTCTCTAATACCACGGTTCCAT 59.285 41.667 0.00 0.00 0.00 3.41
2684 4514 5.684626 CAGTTCAAACAAGCATTTGACTCTC 59.315 40.000 9.54 3.52 45.84 3.20
2685 4515 5.585390 CAGTTCAAACAAGCATTTGACTCT 58.415 37.500 9.54 8.71 45.84 3.24
2686 4516 4.207841 GCAGTTCAAACAAGCATTTGACTC 59.792 41.667 9.54 7.11 45.84 3.36
2687 4517 4.114794 GCAGTTCAAACAAGCATTTGACT 58.885 39.130 9.54 8.10 45.84 3.41
2688 4518 4.114794 AGCAGTTCAAACAAGCATTTGAC 58.885 39.130 9.54 6.50 45.84 3.18
2704 4539 2.677914 ACCAAAAAGGGCTAAGCAGTT 58.322 42.857 0.00 0.00 43.89 3.16
2705 4540 2.365293 CAACCAAAAAGGGCTAAGCAGT 59.635 45.455 0.00 0.00 43.89 4.40
2752 4606 3.815962 CAGCATGATGAGCATTAGAGCTT 59.184 43.478 4.56 0.00 42.26 3.74
2934 4796 2.986479 GCTGTTTTGCCCATTTCTAACG 59.014 45.455 0.00 0.00 0.00 3.18
3135 4997 0.819582 ATTTTCCCATCTTGCCAGCG 59.180 50.000 0.00 0.00 0.00 5.18
3333 5195 6.128795 GCTCCTTCGTGAATAATAAGGATTCG 60.129 42.308 3.30 0.00 44.84 3.34
3444 5306 1.476891 TGCTCCACTTCGGATAGACAC 59.523 52.381 0.00 0.00 45.19 3.67
3492 5354 1.303643 GGCCTCCACCACCTCTTTG 60.304 63.158 0.00 0.00 0.00 2.77
3507 5369 1.228154 ACGGTCTTCCTTGTTGGCC 60.228 57.895 0.00 0.00 35.26 5.36
4034 5909 1.130561 GAGGCTAATTCACGGCACAAC 59.869 52.381 0.00 0.00 0.00 3.32
4138 6034 4.219288 ACAGCTTGAAAATTGGGCTCTAAG 59.781 41.667 0.00 0.00 0.00 2.18
4312 6276 1.135199 TGAACGCTCCCGATAACACTC 60.135 52.381 0.00 0.00 38.29 3.51
4322 6286 1.079503 GACAACATCTGAACGCTCCC 58.920 55.000 0.00 0.00 0.00 4.30
4402 6374 9.429359 CTTTGAGTAATATATTCTGGCGATTCT 57.571 33.333 0.00 0.00 0.00 2.40
4403 6375 9.209175 ACTTTGAGTAATATATTCTGGCGATTC 57.791 33.333 0.00 0.00 0.00 2.52
4404 6376 8.993121 CACTTTGAGTAATATATTCTGGCGATT 58.007 33.333 0.00 0.00 0.00 3.34
4407 6379 6.147821 CCCACTTTGAGTAATATATTCTGGCG 59.852 42.308 0.00 0.00 0.00 5.69
4410 6382 7.227156 AGGCCCACTTTGAGTAATATATTCTG 58.773 38.462 0.00 0.00 0.00 3.02
4411 6383 7.394144 AGGCCCACTTTGAGTAATATATTCT 57.606 36.000 0.00 0.00 0.00 2.40
4412 6384 9.000486 GTTAGGCCCACTTTGAGTAATATATTC 58.000 37.037 0.00 0.00 0.00 1.75
4413 6385 8.499406 TGTTAGGCCCACTTTGAGTAATATATT 58.501 33.333 0.00 2.97 0.00 1.28
4414 6386 8.041143 TGTTAGGCCCACTTTGAGTAATATAT 57.959 34.615 0.00 0.00 0.00 0.86
4415 6387 7.440505 TGTTAGGCCCACTTTGAGTAATATA 57.559 36.000 0.00 0.00 0.00 0.86
4416 6388 6.321821 TGTTAGGCCCACTTTGAGTAATAT 57.678 37.500 0.00 0.00 0.00 1.28
4417 6389 5.765576 TGTTAGGCCCACTTTGAGTAATA 57.234 39.130 0.00 0.00 0.00 0.98
4418 6390 4.650972 TGTTAGGCCCACTTTGAGTAAT 57.349 40.909 0.00 0.00 0.00 1.89
4419 6391 4.440826 TTGTTAGGCCCACTTTGAGTAA 57.559 40.909 0.00 0.00 0.00 2.24
4420 6392 4.650972 ATTGTTAGGCCCACTTTGAGTA 57.349 40.909 0.00 0.00 0.00 2.59
4421 6393 3.525800 ATTGTTAGGCCCACTTTGAGT 57.474 42.857 0.00 0.00 0.00 3.41
4422 6394 4.871933 AAATTGTTAGGCCCACTTTGAG 57.128 40.909 0.00 0.00 0.00 3.02
4423 6395 4.202305 CCAAAATTGTTAGGCCCACTTTGA 60.202 41.667 0.00 0.00 0.00 2.69
4424 6396 4.064388 CCAAAATTGTTAGGCCCACTTTG 58.936 43.478 0.00 4.19 0.00 2.77
4425 6397 3.714280 ACCAAAATTGTTAGGCCCACTTT 59.286 39.130 0.00 0.00 0.00 2.66
4426 6398 3.070878 CACCAAAATTGTTAGGCCCACTT 59.929 43.478 0.00 0.00 0.00 3.16
4427 6399 2.632512 CACCAAAATTGTTAGGCCCACT 59.367 45.455 0.00 0.00 0.00 4.00
4428 6400 2.289382 CCACCAAAATTGTTAGGCCCAC 60.289 50.000 0.00 0.00 0.00 4.61
4429 6401 1.974236 CCACCAAAATTGTTAGGCCCA 59.026 47.619 0.00 0.00 0.00 5.36
4430 6402 1.974957 ACCACCAAAATTGTTAGGCCC 59.025 47.619 0.00 0.00 0.00 5.80
4431 6403 3.181459 ACAACCACCAAAATTGTTAGGCC 60.181 43.478 0.00 0.00 32.70 5.19
4448 6420 2.158827 ACCTTGCCAAATTCCAACAACC 60.159 45.455 0.00 0.00 0.00 3.77
4452 6424 6.875948 AATAAAACCTTGCCAAATTCCAAC 57.124 33.333 0.00 0.00 0.00 3.77
4469 6441 6.650807 TGCAAATTCGCCACCATAAAATAAAA 59.349 30.769 0.00 0.00 0.00 1.52
4470 6442 6.166279 TGCAAATTCGCCACCATAAAATAAA 58.834 32.000 0.00 0.00 0.00 1.40
4471 6443 5.724328 TGCAAATTCGCCACCATAAAATAA 58.276 33.333 0.00 0.00 0.00 1.40
4472 6444 5.330455 TGCAAATTCGCCACCATAAAATA 57.670 34.783 0.00 0.00 0.00 1.40
4473 6445 4.199432 TGCAAATTCGCCACCATAAAAT 57.801 36.364 0.00 0.00 0.00 1.82
4500 6472 3.506455 CGGACAGAGAACAAGACCTAAGA 59.494 47.826 0.00 0.00 0.00 2.10
4501 6473 3.367498 CCGGACAGAGAACAAGACCTAAG 60.367 52.174 0.00 0.00 0.00 2.18
4502 6474 2.561419 CCGGACAGAGAACAAGACCTAA 59.439 50.000 0.00 0.00 0.00 2.69
4503 6475 2.168496 CCGGACAGAGAACAAGACCTA 58.832 52.381 0.00 0.00 0.00 3.08
4504 6476 0.969894 CCGGACAGAGAACAAGACCT 59.030 55.000 0.00 0.00 0.00 3.85
4520 6492 1.301401 TTCTTGTCTTGGTCGCCGG 60.301 57.895 0.00 0.00 0.00 6.13
4535 6507 3.879295 CCTATTGATCGCATGGTTGTTCT 59.121 43.478 0.00 0.00 0.00 3.01
4536 6508 3.876914 TCCTATTGATCGCATGGTTGTTC 59.123 43.478 0.00 0.00 0.00 3.18
4537 6509 3.879295 CTCCTATTGATCGCATGGTTGTT 59.121 43.478 0.00 0.00 0.00 2.83
4538 6510 3.470709 CTCCTATTGATCGCATGGTTGT 58.529 45.455 0.00 0.00 0.00 3.32
4539 6511 2.810274 CCTCCTATTGATCGCATGGTTG 59.190 50.000 0.00 0.00 0.00 3.77
4540 6512 2.705658 TCCTCCTATTGATCGCATGGTT 59.294 45.455 0.00 0.00 0.00 3.67
4541 6513 2.329267 TCCTCCTATTGATCGCATGGT 58.671 47.619 0.00 0.00 0.00 3.55
4542 6514 3.055602 TGATCCTCCTATTGATCGCATGG 60.056 47.826 0.00 0.00 40.19 3.66
4543 6515 4.198028 TGATCCTCCTATTGATCGCATG 57.802 45.455 0.00 0.00 40.19 4.06
4544 6516 4.224594 ACATGATCCTCCTATTGATCGCAT 59.775 41.667 0.00 0.00 40.19 4.73
4545 6517 3.580022 ACATGATCCTCCTATTGATCGCA 59.420 43.478 0.00 0.00 40.19 5.10
4546 6518 4.081752 AGACATGATCCTCCTATTGATCGC 60.082 45.833 0.00 0.00 40.19 4.58
4547 6519 5.649557 GAGACATGATCCTCCTATTGATCG 58.350 45.833 0.00 0.00 40.19 3.69
4548 6520 5.649557 CGAGACATGATCCTCCTATTGATC 58.350 45.833 0.00 0.00 38.27 2.92
4549 6521 4.081752 GCGAGACATGATCCTCCTATTGAT 60.082 45.833 0.00 0.00 0.00 2.57
4550 6522 3.256879 GCGAGACATGATCCTCCTATTGA 59.743 47.826 0.00 0.00 0.00 2.57
4551 6523 3.257873 AGCGAGACATGATCCTCCTATTG 59.742 47.826 0.00 0.00 0.00 1.90
4552 6524 3.505386 AGCGAGACATGATCCTCCTATT 58.495 45.455 0.00 0.00 0.00 1.73
4553 6525 3.168035 AGCGAGACATGATCCTCCTAT 57.832 47.619 0.00 0.00 0.00 2.57
4554 6526 2.666272 AGCGAGACATGATCCTCCTA 57.334 50.000 0.00 0.00 0.00 2.94
4555 6527 1.786937 AAGCGAGACATGATCCTCCT 58.213 50.000 0.00 0.66 0.00 3.69
4556 6528 2.478831 GAAAGCGAGACATGATCCTCC 58.521 52.381 0.00 0.00 0.00 4.30
4557 6529 2.123342 CGAAAGCGAGACATGATCCTC 58.877 52.381 0.00 2.11 40.82 3.71
4558 6530 1.202463 CCGAAAGCGAGACATGATCCT 60.202 52.381 0.00 0.00 40.82 3.24
4559 6531 1.212616 CCGAAAGCGAGACATGATCC 58.787 55.000 0.00 0.00 40.82 3.36
4560 6532 1.855360 GACCGAAAGCGAGACATGATC 59.145 52.381 0.00 0.00 40.82 2.92
4561 6533 1.471676 GGACCGAAAGCGAGACATGAT 60.472 52.381 0.00 0.00 40.82 2.45
4562 6534 0.108804 GGACCGAAAGCGAGACATGA 60.109 55.000 0.00 0.00 40.82 3.07
4563 6535 0.389817 TGGACCGAAAGCGAGACATG 60.390 55.000 0.00 0.00 40.82 3.21
4564 6536 0.537188 ATGGACCGAAAGCGAGACAT 59.463 50.000 0.00 0.00 40.82 3.06
4565 6537 0.389817 CATGGACCGAAAGCGAGACA 60.390 55.000 0.00 0.00 40.82 3.41
4566 6538 1.696832 GCATGGACCGAAAGCGAGAC 61.697 60.000 0.00 0.00 40.82 3.36
4567 6539 1.447838 GCATGGACCGAAAGCGAGA 60.448 57.895 0.00 0.00 40.82 4.04
4568 6540 1.448540 AGCATGGACCGAAAGCGAG 60.449 57.895 0.00 0.00 40.82 5.03
4569 6541 1.741401 CAGCATGGACCGAAAGCGA 60.741 57.895 0.00 0.00 40.82 4.93
4570 6542 1.298157 TTCAGCATGGACCGAAAGCG 61.298 55.000 0.00 0.00 36.16 4.68
4571 6543 1.098050 ATTCAGCATGGACCGAAAGC 58.902 50.000 0.00 0.00 36.16 3.51
4572 6544 3.557595 GTCTATTCAGCATGGACCGAAAG 59.442 47.826 0.00 0.00 37.40 2.62
4573 6545 3.197766 AGTCTATTCAGCATGGACCGAAA 59.802 43.478 0.00 0.00 43.02 3.46
4574 6546 2.766263 AGTCTATTCAGCATGGACCGAA 59.234 45.455 0.00 0.00 43.02 4.30
4575 6547 2.362397 GAGTCTATTCAGCATGGACCGA 59.638 50.000 0.00 0.00 43.02 4.69
4576 6548 2.748605 GAGTCTATTCAGCATGGACCG 58.251 52.381 0.00 0.00 43.02 4.79
4577 6549 2.362397 TCGAGTCTATTCAGCATGGACC 59.638 50.000 0.00 0.00 43.02 4.46
4578 6550 3.717400 TCGAGTCTATTCAGCATGGAC 57.283 47.619 0.00 0.00 42.47 4.02
4579 6551 4.944619 ATTCGAGTCTATTCAGCATGGA 57.055 40.909 0.00 0.00 36.16 3.41
4580 6552 5.052481 TCAATTCGAGTCTATTCAGCATGG 58.948 41.667 0.00 0.00 36.16 3.66
4581 6553 6.292757 CCTTCAATTCGAGTCTATTCAGCATG 60.293 42.308 0.00 0.00 37.54 4.06
4582 6554 5.757320 CCTTCAATTCGAGTCTATTCAGCAT 59.243 40.000 0.00 0.00 0.00 3.79
4583 6555 5.105351 TCCTTCAATTCGAGTCTATTCAGCA 60.105 40.000 0.00 0.00 0.00 4.41
4584 6556 5.352284 TCCTTCAATTCGAGTCTATTCAGC 58.648 41.667 0.00 0.00 0.00 4.26
4585 6557 5.982516 CCTCCTTCAATTCGAGTCTATTCAG 59.017 44.000 0.00 0.00 0.00 3.02
4586 6558 5.422331 ACCTCCTTCAATTCGAGTCTATTCA 59.578 40.000 0.00 0.00 0.00 2.57
4587 6559 5.751028 CACCTCCTTCAATTCGAGTCTATTC 59.249 44.000 0.00 0.00 0.00 1.75
4588 6560 5.187967 ACACCTCCTTCAATTCGAGTCTATT 59.812 40.000 0.00 0.00 0.00 1.73
4589 6561 4.712337 ACACCTCCTTCAATTCGAGTCTAT 59.288 41.667 0.00 0.00 0.00 1.98
4590 6562 4.087182 ACACCTCCTTCAATTCGAGTCTA 58.913 43.478 0.00 0.00 0.00 2.59
4591 6563 2.900546 ACACCTCCTTCAATTCGAGTCT 59.099 45.455 0.00 0.00 0.00 3.24
4592 6564 3.320673 ACACCTCCTTCAATTCGAGTC 57.679 47.619 0.00 0.00 0.00 3.36
4593 6565 3.056035 GGTACACCTCCTTCAATTCGAGT 60.056 47.826 0.00 0.00 0.00 4.18
4594 6566 3.195825 AGGTACACCTCCTTCAATTCGAG 59.804 47.826 0.00 0.00 44.77 4.04
4595 6567 3.170717 AGGTACACCTCCTTCAATTCGA 58.829 45.455 0.00 0.00 44.77 3.71
4596 6568 3.611766 AGGTACACCTCCTTCAATTCG 57.388 47.619 0.00 0.00 44.77 3.34
4608 6580 2.028748 TCTTCTGCCGTTAAGGTACACC 60.029 50.000 0.00 0.00 43.70 4.16
4609 6581 3.308438 TCTTCTGCCGTTAAGGTACAC 57.692 47.619 0.00 0.00 43.70 2.90
4610 6582 4.463539 TGTATCTTCTGCCGTTAAGGTACA 59.536 41.667 4.50 4.50 43.56 2.90
4611 6583 4.802563 GTGTATCTTCTGCCGTTAAGGTAC 59.197 45.833 0.00 0.00 43.70 3.34
4612 6584 4.142093 GGTGTATCTTCTGCCGTTAAGGTA 60.142 45.833 0.00 0.00 43.70 3.08
4613 6585 3.369157 GGTGTATCTTCTGCCGTTAAGGT 60.369 47.826 0.00 0.00 43.70 3.50
4614 6586 3.118738 AGGTGTATCTTCTGCCGTTAAGG 60.119 47.826 0.00 0.00 44.97 2.69
4615 6587 3.865745 CAGGTGTATCTTCTGCCGTTAAG 59.134 47.826 0.00 0.00 0.00 1.85
4616 6588 3.369052 CCAGGTGTATCTTCTGCCGTTAA 60.369 47.826 0.00 0.00 0.00 2.01
4617 6589 2.167693 CCAGGTGTATCTTCTGCCGTTA 59.832 50.000 0.00 0.00 0.00 3.18
4618 6590 1.066143 CCAGGTGTATCTTCTGCCGTT 60.066 52.381 0.00 0.00 0.00 4.44
4619 6591 0.537188 CCAGGTGTATCTTCTGCCGT 59.463 55.000 0.00 0.00 0.00 5.68
4620 6592 0.537188 ACCAGGTGTATCTTCTGCCG 59.463 55.000 0.00 0.00 0.00 5.69
4621 6593 1.134371 GGACCAGGTGTATCTTCTGCC 60.134 57.143 0.00 0.00 0.00 4.85
4622 6594 1.555075 TGGACCAGGTGTATCTTCTGC 59.445 52.381 0.00 0.00 0.00 4.26
4623 6595 3.600388 GTTGGACCAGGTGTATCTTCTG 58.400 50.000 0.00 0.00 0.00 3.02
4624 6596 2.572104 GGTTGGACCAGGTGTATCTTCT 59.428 50.000 0.00 0.00 38.42 2.85
4625 6597 2.304761 TGGTTGGACCAGGTGTATCTTC 59.695 50.000 0.00 0.00 44.79 2.87
4626 6598 2.344592 TGGTTGGACCAGGTGTATCTT 58.655 47.619 0.00 0.00 44.79 2.40
4627 6599 2.038863 TGGTTGGACCAGGTGTATCT 57.961 50.000 0.00 0.00 44.79 1.98
4637 6609 3.351416 GCCGTCGTTGGTTGGACC 61.351 66.667 0.00 0.00 39.22 4.46
4638 6610 1.890510 AAGCCGTCGTTGGTTGGAC 60.891 57.895 0.00 0.00 0.00 4.02
4639 6611 1.890041 CAAGCCGTCGTTGGTTGGA 60.890 57.895 5.76 0.00 37.51 3.53
4640 6612 2.637025 CAAGCCGTCGTTGGTTGG 59.363 61.111 5.76 0.00 37.51 3.77
4641 6613 2.051345 GCAAGCCGTCGTTGGTTG 60.051 61.111 8.49 8.49 42.53 3.77
4642 6614 3.284449 GGCAAGCCGTCGTTGGTT 61.284 61.111 0.00 0.00 0.00 3.67
4643 6615 4.555709 TGGCAAGCCGTCGTTGGT 62.556 61.111 6.60 0.00 39.42 3.67
4644 6616 4.025401 GTGGCAAGCCGTCGTTGG 62.025 66.667 6.60 0.00 39.42 3.77
4645 6617 2.954753 GAGTGGCAAGCCGTCGTTG 61.955 63.158 6.60 0.00 39.42 4.10
4646 6618 2.665185 GAGTGGCAAGCCGTCGTT 60.665 61.111 6.60 0.00 39.42 3.85
4647 6619 3.616721 AGAGTGGCAAGCCGTCGT 61.617 61.111 6.60 0.00 39.42 4.34
4648 6620 3.114616 CAGAGTGGCAAGCCGTCG 61.115 66.667 6.60 0.00 39.42 5.12
4649 6621 2.743928 CCAGAGTGGCAAGCCGTC 60.744 66.667 6.60 5.91 39.42 4.79
4650 6622 3.241530 TCCAGAGTGGCAAGCCGT 61.242 61.111 6.60 0.00 37.47 5.68
4651 6623 2.435586 CTCCAGAGTGGCAAGCCG 60.436 66.667 6.60 0.00 37.47 5.52
4652 6624 0.250901 TTTCTCCAGAGTGGCAAGCC 60.251 55.000 3.61 3.61 37.47 4.35
4653 6625 1.609208 TTTTCTCCAGAGTGGCAAGC 58.391 50.000 0.00 0.00 37.47 4.01
4654 6626 3.822735 TCAATTTTCTCCAGAGTGGCAAG 59.177 43.478 0.00 0.00 37.47 4.01
4655 6627 3.569701 GTCAATTTTCTCCAGAGTGGCAA 59.430 43.478 0.00 0.00 37.47 4.52
4656 6628 3.149196 GTCAATTTTCTCCAGAGTGGCA 58.851 45.455 0.00 0.00 37.47 4.92
4657 6629 2.489722 GGTCAATTTTCTCCAGAGTGGC 59.510 50.000 0.00 0.00 37.47 5.01
4658 6630 3.754965 TGGTCAATTTTCTCCAGAGTGG 58.245 45.455 0.00 0.00 39.43 4.00
4659 6631 4.763793 ACATGGTCAATTTTCTCCAGAGTG 59.236 41.667 0.00 0.00 33.33 3.51
4660 6632 4.763793 CACATGGTCAATTTTCTCCAGAGT 59.236 41.667 0.00 0.00 33.33 3.24
4661 6633 4.763793 ACACATGGTCAATTTTCTCCAGAG 59.236 41.667 0.00 0.00 33.33 3.35
4662 6634 4.728772 ACACATGGTCAATTTTCTCCAGA 58.271 39.130 0.00 0.00 33.33 3.86
4663 6635 5.458041 AACACATGGTCAATTTTCTCCAG 57.542 39.130 0.00 0.00 33.33 3.86
4664 6636 6.128035 CGATAACACATGGTCAATTTTCTCCA 60.128 38.462 0.00 0.00 0.00 3.86
4665 6637 6.093495 TCGATAACACATGGTCAATTTTCTCC 59.907 38.462 0.00 0.00 0.00 3.71
4666 6638 6.961554 GTCGATAACACATGGTCAATTTTCTC 59.038 38.462 0.00 0.00 0.00 2.87
4667 6639 6.402118 CGTCGATAACACATGGTCAATTTTCT 60.402 38.462 0.00 0.00 0.00 2.52
4668 6640 5.732647 CGTCGATAACACATGGTCAATTTTC 59.267 40.000 0.00 0.00 0.00 2.29
4669 6641 5.410132 TCGTCGATAACACATGGTCAATTTT 59.590 36.000 0.00 0.00 0.00 1.82
4670 6642 4.932799 TCGTCGATAACACATGGTCAATTT 59.067 37.500 0.00 0.00 0.00 1.82
4671 6643 4.500127 TCGTCGATAACACATGGTCAATT 58.500 39.130 0.00 0.00 0.00 2.32
4672 6644 4.118093 TCGTCGATAACACATGGTCAAT 57.882 40.909 0.00 0.00 0.00 2.57
4673 6645 3.579335 TCGTCGATAACACATGGTCAA 57.421 42.857 0.00 0.00 0.00 3.18
4674 6646 3.247442 GTTCGTCGATAACACATGGTCA 58.753 45.455 0.00 0.00 0.00 4.02
4675 6647 2.278094 CGTTCGTCGATAACACATGGTC 59.722 50.000 12.38 0.00 42.86 4.02
4676 6648 2.095110 TCGTTCGTCGATAACACATGGT 60.095 45.455 12.38 0.00 44.01 3.55
4677 6649 2.521996 TCGTTCGTCGATAACACATGG 58.478 47.619 12.38 0.00 44.01 3.66
4687 6659 0.956902 TCATCCCAGTCGTTCGTCGA 60.957 55.000 0.00 0.00 46.83 4.20
4688 6660 0.100682 ATCATCCCAGTCGTTCGTCG 59.899 55.000 0.00 0.00 41.41 5.12
4689 6661 1.405821 AGATCATCCCAGTCGTTCGTC 59.594 52.381 0.00 0.00 0.00 4.20
4690 6662 1.405821 GAGATCATCCCAGTCGTTCGT 59.594 52.381 0.00 0.00 0.00 3.85
4691 6663 1.269309 GGAGATCATCCCAGTCGTTCG 60.269 57.143 0.00 0.00 43.01 3.95
4692 6664 2.517650 GGAGATCATCCCAGTCGTTC 57.482 55.000 0.00 0.00 43.01 3.95
4702 6674 1.055040 CAGGAGGGGTGGAGATCATC 58.945 60.000 0.00 0.00 0.00 2.92
4703 6675 1.059006 GCAGGAGGGGTGGAGATCAT 61.059 60.000 0.00 0.00 0.00 2.45
4704 6676 1.690633 GCAGGAGGGGTGGAGATCA 60.691 63.158 0.00 0.00 0.00 2.92
4705 6677 0.985490 AAGCAGGAGGGGTGGAGATC 60.985 60.000 0.00 0.00 0.00 2.75
4706 6678 0.551131 AAAGCAGGAGGGGTGGAGAT 60.551 55.000 0.00 0.00 0.00 2.75
4707 6679 1.151810 AAAGCAGGAGGGGTGGAGA 60.152 57.895 0.00 0.00 0.00 3.71
4708 6680 1.204113 AGAAAGCAGGAGGGGTGGAG 61.204 60.000 0.00 0.00 0.00 3.86
4709 6681 0.118346 TAGAAAGCAGGAGGGGTGGA 59.882 55.000 0.00 0.00 0.00 4.02
4710 6682 0.543749 CTAGAAAGCAGGAGGGGTGG 59.456 60.000 0.00 0.00 0.00 4.61
4711 6683 0.543749 CCTAGAAAGCAGGAGGGGTG 59.456 60.000 0.00 0.00 34.91 4.61
4712 6684 0.417841 TCCTAGAAAGCAGGAGGGGT 59.582 55.000 0.00 0.00 37.27 4.95
4713 6685 3.324246 TCCTAGAAAGCAGGAGGGG 57.676 57.895 0.00 0.00 37.27 4.79
4717 6689 1.556911 CAAGGCTCCTAGAAAGCAGGA 59.443 52.381 16.03 0.00 41.66 3.86
4718 6690 1.407989 CCAAGGCTCCTAGAAAGCAGG 60.408 57.143 16.03 11.44 41.66 4.85
4719 6691 1.407989 CCCAAGGCTCCTAGAAAGCAG 60.408 57.143 16.03 7.52 41.66 4.24
4720 6692 0.620556 CCCAAGGCTCCTAGAAAGCA 59.379 55.000 16.03 0.00 41.66 3.91
4721 6693 0.912486 TCCCAAGGCTCCTAGAAAGC 59.088 55.000 8.19 8.19 39.09 3.51
4722 6694 2.224161 CGATCCCAAGGCTCCTAGAAAG 60.224 54.545 0.00 0.00 0.00 2.62
4723 6695 1.762957 CGATCCCAAGGCTCCTAGAAA 59.237 52.381 0.00 0.00 0.00 2.52
4724 6696 1.414158 CGATCCCAAGGCTCCTAGAA 58.586 55.000 0.00 0.00 0.00 2.10
4725 6697 0.470080 CCGATCCCAAGGCTCCTAGA 60.470 60.000 0.00 0.00 0.00 2.43
4726 6698 2.053618 CCGATCCCAAGGCTCCTAG 58.946 63.158 0.00 0.00 0.00 3.02
4727 6699 4.295407 CCGATCCCAAGGCTCCTA 57.705 61.111 0.00 0.00 0.00 2.94
4733 6705 0.035056 GGATATGGCCGATCCCAAGG 60.035 60.000 21.10 0.00 38.61 3.61
4734 6706 3.558674 GGATATGGCCGATCCCAAG 57.441 57.895 21.10 0.00 38.61 3.61
4743 6715 1.244019 GGCAATGGTCGGATATGGCC 61.244 60.000 0.00 0.00 0.00 5.36
4744 6716 1.244019 GGGCAATGGTCGGATATGGC 61.244 60.000 0.00 0.00 35.99 4.40
4745 6717 0.955428 CGGGCAATGGTCGGATATGG 60.955 60.000 0.00 0.00 0.00 2.74
4746 6718 0.250295 ACGGGCAATGGTCGGATATG 60.250 55.000 0.00 0.00 0.00 1.78
4747 6719 0.472471 AACGGGCAATGGTCGGATAT 59.528 50.000 0.00 0.00 0.00 1.63
4748 6720 0.462937 CAACGGGCAATGGTCGGATA 60.463 55.000 0.00 0.00 0.00 2.59
4749 6721 1.748879 CAACGGGCAATGGTCGGAT 60.749 57.895 0.00 0.00 0.00 4.18
4750 6722 2.359354 CAACGGGCAATGGTCGGA 60.359 61.111 0.00 0.00 0.00 4.55
4751 6723 3.439540 CCAACGGGCAATGGTCGG 61.440 66.667 0.00 0.00 31.84 4.79
4752 6724 3.439540 CCCAACGGGCAATGGTCG 61.440 66.667 2.43 0.00 35.35 4.79
4753 6725 2.034999 TCCCAACGGGCAATGGTC 59.965 61.111 0.00 0.00 43.94 4.02
4754 6726 2.282887 GTCCCAACGGGCAATGGT 60.283 61.111 0.00 0.00 43.94 3.55
4755 6727 3.439540 CGTCCCAACGGGCAATGG 61.440 66.667 0.00 0.00 45.21 3.16
4764 6736 3.547413 GCTTTATAAATCCGCGTCCCAAC 60.547 47.826 4.92 0.00 0.00 3.77
4765 6737 2.614983 GCTTTATAAATCCGCGTCCCAA 59.385 45.455 4.92 0.00 0.00 4.12
4766 6738 2.158871 AGCTTTATAAATCCGCGTCCCA 60.159 45.455 4.92 0.00 0.00 4.37
4767 6739 2.479275 GAGCTTTATAAATCCGCGTCCC 59.521 50.000 4.92 0.00 0.00 4.46
4768 6740 3.128349 TGAGCTTTATAAATCCGCGTCC 58.872 45.455 4.92 0.00 0.00 4.79
4769 6741 3.184581 CCTGAGCTTTATAAATCCGCGTC 59.815 47.826 4.92 0.00 0.00 5.19
4770 6742 3.131396 CCTGAGCTTTATAAATCCGCGT 58.869 45.455 4.92 0.00 0.00 6.01
4771 6743 2.096218 GCCTGAGCTTTATAAATCCGCG 60.096 50.000 0.00 0.00 35.50 6.46
4772 6744 3.544356 GCCTGAGCTTTATAAATCCGC 57.456 47.619 0.00 0.00 35.50 5.54
4785 6757 1.376553 GGTGTCCAGAAGCCTGAGC 60.377 63.158 0.00 0.00 43.02 4.26
4786 6758 0.248843 GAGGTGTCCAGAAGCCTGAG 59.751 60.000 0.00 0.00 43.02 3.35
4787 6759 1.194781 GGAGGTGTCCAGAAGCCTGA 61.195 60.000 0.00 0.00 43.31 3.86
4788 6760 1.197430 AGGAGGTGTCCAGAAGCCTG 61.197 60.000 0.00 0.00 46.80 4.85
4789 6761 0.413832 TAGGAGGTGTCCAGAAGCCT 59.586 55.000 0.00 0.00 46.80 4.58
4790 6762 1.414550 GATAGGAGGTGTCCAGAAGCC 59.585 57.143 0.00 0.00 46.80 4.35
4791 6763 1.414550 GGATAGGAGGTGTCCAGAAGC 59.585 57.143 0.00 0.00 46.80 3.86
4792 6764 2.752030 TGGATAGGAGGTGTCCAGAAG 58.248 52.381 0.00 0.00 46.80 2.85
4793 6765 2.940514 TGGATAGGAGGTGTCCAGAA 57.059 50.000 0.00 0.00 46.80 3.02
4797 6769 2.158143 AGGGTATGGATAGGAGGTGTCC 60.158 54.545 0.00 0.00 44.33 4.02
4798 6770 3.261818 AGGGTATGGATAGGAGGTGTC 57.738 52.381 0.00 0.00 0.00 3.67
4799 6771 3.469771 TGTAGGGTATGGATAGGAGGTGT 59.530 47.826 0.00 0.00 0.00 4.16
4800 6772 4.127918 TGTAGGGTATGGATAGGAGGTG 57.872 50.000 0.00 0.00 0.00 4.00
4801 6773 4.845530 TTGTAGGGTATGGATAGGAGGT 57.154 45.455 0.00 0.00 0.00 3.85
4802 6774 5.094387 ACATTGTAGGGTATGGATAGGAGG 58.906 45.833 0.00 0.00 0.00 4.30
4803 6775 6.467677 CAACATTGTAGGGTATGGATAGGAG 58.532 44.000 0.00 0.00 0.00 3.69
4804 6776 5.221843 GCAACATTGTAGGGTATGGATAGGA 60.222 44.000 0.00 0.00 0.00 2.94
4805 6777 5.003804 GCAACATTGTAGGGTATGGATAGG 58.996 45.833 0.00 0.00 0.00 2.57
4806 6778 5.869579 AGCAACATTGTAGGGTATGGATAG 58.130 41.667 0.00 0.00 0.00 2.08
4807 6779 5.904984 AGCAACATTGTAGGGTATGGATA 57.095 39.130 0.00 0.00 0.00 2.59
4808 6780 4.796110 AGCAACATTGTAGGGTATGGAT 57.204 40.909 0.00 0.00 0.00 3.41
4809 6781 4.584638 AAGCAACATTGTAGGGTATGGA 57.415 40.909 0.00 0.00 0.00 3.41
4810 6782 6.601613 TCTTAAAGCAACATTGTAGGGTATGG 59.398 38.462 0.00 0.00 0.00 2.74
4811 6783 7.624360 TCTTAAAGCAACATTGTAGGGTATG 57.376 36.000 0.00 0.00 0.00 2.39
4812 6784 7.502561 GGATCTTAAAGCAACATTGTAGGGTAT 59.497 37.037 0.00 0.00 0.00 2.73
4813 6785 6.826741 GGATCTTAAAGCAACATTGTAGGGTA 59.173 38.462 0.00 0.00 0.00 3.69
4814 6786 5.652452 GGATCTTAAAGCAACATTGTAGGGT 59.348 40.000 0.00 0.00 0.00 4.34
4815 6787 5.220854 CGGATCTTAAAGCAACATTGTAGGG 60.221 44.000 0.00 0.00 0.00 3.53
4816 6788 5.354234 ACGGATCTTAAAGCAACATTGTAGG 59.646 40.000 0.00 0.00 0.00 3.18
4817 6789 6.250819 CACGGATCTTAAAGCAACATTGTAG 58.749 40.000 0.00 0.00 0.00 2.74
4818 6790 5.391523 GCACGGATCTTAAAGCAACATTGTA 60.392 40.000 0.00 0.00 0.00 2.41
4819 6791 4.615912 GCACGGATCTTAAAGCAACATTGT 60.616 41.667 0.00 0.00 0.00 2.71
4820 6792 3.853671 GCACGGATCTTAAAGCAACATTG 59.146 43.478 0.00 0.00 0.00 2.82
4821 6793 3.758554 AGCACGGATCTTAAAGCAACATT 59.241 39.130 0.00 0.00 0.00 2.71
4822 6794 3.347216 AGCACGGATCTTAAAGCAACAT 58.653 40.909 0.00 0.00 0.00 2.71
4823 6795 2.778299 AGCACGGATCTTAAAGCAACA 58.222 42.857 0.00 0.00 0.00 3.33
4824 6796 5.522460 TGTATAGCACGGATCTTAAAGCAAC 59.478 40.000 0.00 0.00 0.00 4.17
4825 6797 5.666462 TGTATAGCACGGATCTTAAAGCAA 58.334 37.500 0.00 0.00 0.00 3.91
4826 6798 5.270893 TGTATAGCACGGATCTTAAAGCA 57.729 39.130 0.00 0.00 0.00 3.91
4827 6799 5.753921 AGTTGTATAGCACGGATCTTAAAGC 59.246 40.000 0.00 0.00 0.00 3.51
4828 6800 8.753175 GTTAGTTGTATAGCACGGATCTTAAAG 58.247 37.037 0.00 0.00 0.00 1.85
4829 6801 8.472413 AGTTAGTTGTATAGCACGGATCTTAAA 58.528 33.333 0.00 0.00 0.00 1.52
4830 6802 8.004087 AGTTAGTTGTATAGCACGGATCTTAA 57.996 34.615 0.00 0.00 0.00 1.85
4831 6803 7.578310 AGTTAGTTGTATAGCACGGATCTTA 57.422 36.000 0.00 0.00 0.00 2.10
4832 6804 6.466885 AGTTAGTTGTATAGCACGGATCTT 57.533 37.500 0.00 0.00 0.00 2.40
4833 6805 6.321690 AGAAGTTAGTTGTATAGCACGGATCT 59.678 38.462 0.00 0.00 0.00 2.75
4834 6806 6.505272 AGAAGTTAGTTGTATAGCACGGATC 58.495 40.000 0.00 0.00 0.00 3.36
4835 6807 6.466885 AGAAGTTAGTTGTATAGCACGGAT 57.533 37.500 0.00 0.00 0.00 4.18
4836 6808 5.909621 AGAAGTTAGTTGTATAGCACGGA 57.090 39.130 0.00 0.00 0.00 4.69
4837 6809 7.031372 TGTAAGAAGTTAGTTGTATAGCACGG 58.969 38.462 0.00 0.00 0.00 4.94
4838 6810 8.630278 ATGTAAGAAGTTAGTTGTATAGCACG 57.370 34.615 0.00 0.00 0.00 5.34
4839 6811 9.582431 TGATGTAAGAAGTTAGTTGTATAGCAC 57.418 33.333 0.00 0.00 0.00 4.40
4840 6812 9.803315 CTGATGTAAGAAGTTAGTTGTATAGCA 57.197 33.333 0.00 0.00 0.00 3.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.