Multiple sequence alignment - TraesCS1D01G049800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G049800 chr1D 100.000 7200 0 0 1 7200 30087576 30080377 0.000000e+00 13296
1 TraesCS1D01G049800 chr1D 78.881 554 99 14 5429 5973 7021813 7022357 6.870000e-95 359
2 TraesCS1D01G049800 chr1D 81.069 449 68 14 4188 4627 20948101 20947661 6.920000e-90 342
3 TraesCS1D01G049800 chr1B 94.656 2620 100 12 2233 4819 47635486 47632874 0.000000e+00 4026
4 TraesCS1D01G049800 chr1B 93.593 1311 56 13 905 2201 47637038 47635742 0.000000e+00 1930
5 TraesCS1D01G049800 chr1B 92.812 960 58 6 4895 5845 47632879 47631922 0.000000e+00 1380
6 TraesCS1D01G049800 chr1B 87.740 416 26 3 6045 6459 47630330 47629939 5.090000e-126 462
7 TraesCS1D01G049800 chr1B 83.891 329 44 7 4178 4503 34253116 34252794 9.070000e-79 305
8 TraesCS1D01G049800 chr1B 83.568 213 30 5 533 744 330137908 330138116 2.050000e-45 195
9 TraesCS1D01G049800 chr1A 93.679 1408 71 13 4003 5395 30141782 30140378 0.000000e+00 2091
10 TraesCS1D01G049800 chr1A 91.406 1408 59 22 907 2288 30165933 30164562 0.000000e+00 1873
11 TraesCS1D01G049800 chr1A 95.701 1070 35 3 5400 6467 30140337 30139277 0.000000e+00 1711
12 TraesCS1D01G049800 chr1A 94.307 1089 43 9 3557 4642 30011336 30012408 0.000000e+00 1650
13 TraesCS1D01G049800 chr1A 90.316 1043 55 16 1237 2250 30004575 30005600 0.000000e+00 1325
14 TraesCS1D01G049800 chr1A 92.421 884 49 3 2303 3168 30164505 30163622 0.000000e+00 1245
15 TraesCS1D01G049800 chr1A 93.274 669 31 7 6545 7200 30139289 30138622 0.000000e+00 974
16 TraesCS1D01G049800 chr1A 92.427 647 35 3 3303 3949 30142413 30141781 0.000000e+00 911
17 TraesCS1D01G049800 chr1A 93.356 587 29 4 2317 2894 30005867 30006452 0.000000e+00 859
18 TraesCS1D01G049800 chr1A 79.665 477 51 24 747 1214 29998825 29999264 1.170000e-77 302
19 TraesCS1D01G049800 chr1A 77.215 474 79 13 6707 7162 62191137 62190675 4.310000e-62 250
20 TraesCS1D01G049800 chr1A 84.211 209 30 3 541 749 440899264 440899059 4.410000e-47 200
21 TraesCS1D01G049800 chr1A 83.810 210 30 4 539 748 449414077 449413872 5.700000e-46 196
22 TraesCS1D01G049800 chr1A 99.048 105 1 0 3208 3312 30163618 30163514 9.540000e-44 189
23 TraesCS1D01G049800 chr1A 83.019 212 25 6 67 267 29998226 29998437 1.600000e-41 182
24 TraesCS1D01G049800 chr1A 97.101 69 2 0 2233 2301 30005612 30005680 4.560000e-22 117
25 TraesCS1D01G049800 chr1A 90.667 75 7 0 4712 4786 30015806 30015880 4.600000e-17 100
26 TraesCS1D01G049800 chr6D 96.694 363 10 1 3519 3881 58114456 58114096 2.870000e-168 603
27 TraesCS1D01G049800 chr6B 96.694 363 10 1 3519 3881 395675858 395676218 2.870000e-168 603
28 TraesCS1D01G049800 chr5B 96.694 363 10 1 3519 3881 609881667 609881307 2.870000e-168 603
29 TraesCS1D01G049800 chr5B 96.419 363 11 1 3519 3881 609885922 609885562 1.340000e-166 597
30 TraesCS1D01G049800 chr5B 96.419 363 11 1 3519 3881 609890176 609889816 1.340000e-166 597
31 TraesCS1D01G049800 chr5B 82.583 333 46 9 4178 4503 8540847 8540520 4.250000e-72 283
32 TraesCS1D01G049800 chr5B 88.889 189 20 1 1531 1719 653010248 653010061 1.560000e-56 231
33 TraesCS1D01G049800 chr5B 89.831 177 18 0 1543 1719 8524477 8524653 2.020000e-55 228
34 TraesCS1D01G049800 chr5B 93.750 80 5 0 1 80 228692612 228692533 3.530000e-23 121
35 TraesCS1D01G049800 chr5A 81.683 606 66 36 3349 3914 6434848 6434248 5.090000e-126 462
36 TraesCS1D01G049800 chr5A 84.062 320 46 4 4183 4501 6484402 6484087 3.260000e-78 303
37 TraesCS1D01G049800 chr5A 76.619 556 109 16 5429 5975 6439472 6438929 3.290000e-73 287
38 TraesCS1D01G049800 chr5A 76.619 556 109 16 5429 5975 6445683 6445140 3.290000e-73 287
39 TraesCS1D01G049800 chr5A 86.772 189 25 0 1531 1719 6615522 6615710 2.040000e-50 211
40 TraesCS1D01G049800 chr5A 84.360 211 28 5 539 748 295029728 295029522 1.220000e-47 202
41 TraesCS1D01G049800 chr5A 97.183 71 2 0 1 71 464059118 464059188 3.530000e-23 121
42 TraesCS1D01G049800 chr5A 80.625 160 22 8 1058 1212 6615031 6615186 1.640000e-21 115
43 TraesCS1D01G049800 chr4A 85.132 417 46 9 6585 6995 707245375 707244969 5.200000e-111 412
44 TraesCS1D01G049800 chr3B 78.415 593 104 19 6585 7171 732821718 732821144 1.480000e-96 364
45 TraesCS1D01G049800 chr5D 81.293 433 62 14 4188 4606 8260889 8261316 4.160000e-87 333
46 TraesCS1D01G049800 chr5D 79.377 514 74 23 4005 4503 8410164 8410660 4.160000e-87 333
47 TraesCS1D01G049800 chr5D 91.525 177 15 0 1543 1719 8407324 8407500 2.010000e-60 244
48 TraesCS1D01G049800 chr5D 87.701 187 23 0 1543 1729 8419635 8419449 1.220000e-52 219
49 TraesCS1D01G049800 chr5D 85.222 203 28 2 1531 1732 8052990 8052789 2.630000e-49 207
50 TraesCS1D01G049800 chr5D 77.206 272 44 14 959 1212 8406705 8406976 7.530000e-30 143
51 TraesCS1D01G049800 chr7B 75.639 587 100 26 6587 7159 616466907 616466350 1.200000e-62 252
52 TraesCS1D01G049800 chr7B 84.236 203 27 5 538 739 677556680 677556482 7.370000e-45 193
53 TraesCS1D01G049800 chr7B 92.683 82 4 2 1 82 93917558 93917479 4.560000e-22 117
54 TraesCS1D01G049800 chr2D 85.990 207 26 3 538 744 128025970 128025767 1.220000e-52 219
55 TraesCS1D01G049800 chr2D 95.946 74 3 0 1 74 594864888 594864815 3.530000e-23 121
56 TraesCS1D01G049800 chr4B 74.446 587 109 27 6585 7159 86751164 86751721 1.570000e-51 215
57 TraesCS1D01G049800 chr2A 84.834 211 24 7 543 750 117393012 117393217 9.470000e-49 206
58 TraesCS1D01G049800 chr2A 84.135 208 28 5 537 743 87566392 87566189 5.700000e-46 196
59 TraesCS1D01G049800 chr6A 83.981 206 30 3 541 746 549989780 549989982 2.050000e-45 195
60 TraesCS1D01G049800 chr6A 98.571 70 1 0 1 70 246317287 246317218 2.730000e-24 124
61 TraesCS1D01G049800 chr3D 98.571 70 1 0 1 70 337045618 337045549 2.730000e-24 124
62 TraesCS1D01G049800 chr3A 98.571 70 1 0 1 70 414954804 414954735 2.730000e-24 124
63 TraesCS1D01G049800 chr3A 88.889 99 8 3 1 99 220235023 220235118 1.270000e-22 119
64 TraesCS1D01G049800 chr4D 95.946 74 3 0 1 74 364079170 364079243 3.530000e-23 121


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G049800 chr1D 30080377 30087576 7199 True 13296.000000 13296 100.000000 1 7200 1 chr1D.!!$R2 7199
1 TraesCS1D01G049800 chr1D 7021813 7022357 544 False 359.000000 359 78.881000 5429 5973 1 chr1D.!!$F1 544
2 TraesCS1D01G049800 chr1B 47629939 47637038 7099 True 1949.500000 4026 92.200250 905 6459 4 chr1B.!!$R2 5554
3 TraesCS1D01G049800 chr1A 30138622 30142413 3791 True 1421.750000 2091 93.770250 3303 7200 4 chr1A.!!$R4 3897
4 TraesCS1D01G049800 chr1A 30163514 30165933 2419 True 1102.333333 1873 94.291667 907 3312 3 chr1A.!!$R5 2405
5 TraesCS1D01G049800 chr1A 30011336 30015880 4544 False 875.000000 1650 92.487000 3557 4786 2 chr1A.!!$F3 1229
6 TraesCS1D01G049800 chr1A 30004575 30006452 1877 False 767.000000 1325 93.591000 1237 2894 3 chr1A.!!$F2 1657
7 TraesCS1D01G049800 chr1A 29998226 29999264 1038 False 242.000000 302 81.342000 67 1214 2 chr1A.!!$F1 1147
8 TraesCS1D01G049800 chr5B 609881307 609890176 8869 True 599.000000 603 96.510667 3519 3881 3 chr5B.!!$R4 362
9 TraesCS1D01G049800 chr5A 6434248 6434848 600 True 462.000000 462 81.683000 3349 3914 1 chr5A.!!$R1 565
10 TraesCS1D01G049800 chr5A 6438929 6439472 543 True 287.000000 287 76.619000 5429 5975 1 chr5A.!!$R2 546
11 TraesCS1D01G049800 chr5A 6445140 6445683 543 True 287.000000 287 76.619000 5429 5975 1 chr5A.!!$R3 546
12 TraesCS1D01G049800 chr3B 732821144 732821718 574 True 364.000000 364 78.415000 6585 7171 1 chr3B.!!$R1 586
13 TraesCS1D01G049800 chr5D 8406705 8410660 3955 False 240.000000 333 82.702667 959 4503 3 chr5D.!!$F2 3544
14 TraesCS1D01G049800 chr7B 616466350 616466907 557 True 252.000000 252 75.639000 6587 7159 1 chr7B.!!$R2 572
15 TraesCS1D01G049800 chr4B 86751164 86751721 557 False 215.000000 215 74.446000 6585 7159 1 chr4B.!!$F1 574

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
196 208 0.108898 AAGTGAGCTGCTACTGCGAG 60.109 55.0 0.15 0.0 43.34 5.03 F
1127 1280 0.109132 CAACCCTTGGATTTGCTCGC 60.109 55.0 0.00 0.0 0.00 5.03 F
1899 2151 0.257039 CCTATGGCAACCTTCCTGCT 59.743 55.0 0.00 0.0 39.82 4.24 F
3135 4465 0.953727 GTCACTGGCTCACAAATGCA 59.046 50.0 0.00 0.0 0.00 3.96 F
3148 4478 0.684153 AAATGCATGGAGGGTTCCCG 60.684 55.0 0.00 0.0 43.33 5.14 F
4550 10095 0.955919 GCCTGCTTTGCGGTCTAAGT 60.956 55.0 0.00 0.0 32.22 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2070 2842 0.746659 AGGTCCAGCACAAAACAAGC 59.253 50.000 0.00 0.0 0.00 4.01 R
2620 3933 1.339438 CCTGACAGACACATGGAAGGG 60.339 57.143 3.32 0.0 0.00 3.95 R
3148 4478 1.014352 CCATACTACGCCAAGCCAAC 58.986 55.000 0.00 0.0 0.00 3.77 R
5097 13990 2.483013 CCTTGTCGTTTCAGGTCAGACA 60.483 50.000 2.17 0.0 39.68 3.41 R
5119 14012 3.686726 CCTGCTTCTTAAATGCTTCGTCT 59.313 43.478 0.00 0.0 0.00 4.18 R
6477 17399 1.350071 TGGGAACTGGCAAATGCAAT 58.650 45.000 7.80 0.0 44.36 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 76 7.624549 ACATTGGAGACATATCACTTAACAGT 58.375 34.615 0.00 0.00 42.32 3.55
76 77 7.550551 ACATTGGAGACATATCACTTAACAGTG 59.449 37.037 0.00 0.00 46.27 3.66
105 109 7.931578 ACGTCTTATATTATGAGAGAGGGAG 57.068 40.000 0.00 0.00 0.00 4.30
113 117 8.746052 ATATTATGAGAGAGGGAGTAGATTCG 57.254 38.462 0.00 0.00 0.00 3.34
125 129 3.926616 AGTAGATTCGTGGTCCAAAGTG 58.073 45.455 0.00 0.00 0.00 3.16
127 131 1.420138 AGATTCGTGGTCCAAAGTGGT 59.580 47.619 0.00 0.00 39.03 4.16
128 132 1.535462 GATTCGTGGTCCAAAGTGGTG 59.465 52.381 0.00 0.00 39.03 4.17
138 142 2.687425 TCCAAAGTGGTGTTGTGATGTG 59.313 45.455 0.00 0.00 39.03 3.21
149 153 3.427193 TGTTGTGATGTGTGTCGTTATCG 59.573 43.478 0.00 0.00 38.55 2.92
150 154 3.291809 TGTGATGTGTGTCGTTATCGT 57.708 42.857 0.00 0.00 38.33 3.73
152 156 3.427193 TGTGATGTGTGTCGTTATCGTTG 59.573 43.478 0.00 0.00 38.33 4.10
153 157 3.671459 GTGATGTGTGTCGTTATCGTTGA 59.329 43.478 0.00 0.00 38.33 3.18
154 158 3.671459 TGATGTGTGTCGTTATCGTTGAC 59.329 43.478 0.00 0.00 38.33 3.18
155 159 2.045586 TGTGTGTCGTTATCGTTGACG 58.954 47.619 4.57 4.57 40.43 4.35
161 165 1.266446 TCGTTATCGTTGACGGACACA 59.734 47.619 10.40 0.00 39.59 3.72
179 183 3.872771 ACACAAGCAAAGGCATTCAAAAG 59.127 39.130 0.00 0.00 44.61 2.27
184 188 2.477754 GCAAAGGCATTCAAAAGTGAGC 59.522 45.455 0.00 0.00 40.72 4.26
188 192 1.271656 GGCATTCAAAAGTGAGCTGCT 59.728 47.619 0.00 0.00 40.98 4.24
196 208 0.108898 AAGTGAGCTGCTACTGCGAG 60.109 55.000 0.15 0.00 43.34 5.03
198 210 0.525242 GTGAGCTGCTACTGCGAGAG 60.525 60.000 0.15 0.00 43.34 3.20
206 218 4.674623 GCTGCTACTGCGAGAGTTTTACTA 60.675 45.833 0.00 0.00 43.34 1.82
237 249 8.742554 ACGATACATTTTGGTTTTCATTTCTC 57.257 30.769 0.00 0.00 0.00 2.87
250 262 3.153130 TCATTTCTCGGATGTTTTGGCA 58.847 40.909 0.00 0.00 0.00 4.92
277 296 8.288689 ACATAGGTAAATGTTGGTTTGGTATC 57.711 34.615 0.00 0.00 36.71 2.24
279 298 8.912988 CATAGGTAAATGTTGGTTTGGTATCAT 58.087 33.333 0.00 0.00 0.00 2.45
284 303 4.022413 TGTTGGTTTGGTATCATCGGAA 57.978 40.909 0.00 0.00 0.00 4.30
285 304 4.399219 TGTTGGTTTGGTATCATCGGAAA 58.601 39.130 0.00 0.00 0.00 3.13
286 305 4.827835 TGTTGGTTTGGTATCATCGGAAAA 59.172 37.500 0.00 0.00 0.00 2.29
287 306 5.302059 TGTTGGTTTGGTATCATCGGAAAAA 59.698 36.000 0.00 0.00 0.00 1.94
289 308 6.202516 TGGTTTGGTATCATCGGAAAAATC 57.797 37.500 0.00 0.00 0.00 2.17
290 309 5.949354 TGGTTTGGTATCATCGGAAAAATCT 59.051 36.000 0.00 0.00 0.00 2.40
292 311 7.612244 TGGTTTGGTATCATCGGAAAAATCTAA 59.388 33.333 0.00 0.00 0.00 2.10
294 313 9.285770 GTTTGGTATCATCGGAAAAATCTAAAC 57.714 33.333 0.00 0.00 0.00 2.01
295 314 8.568676 TTGGTATCATCGGAAAAATCTAAACA 57.431 30.769 0.00 0.00 0.00 2.83
301 320 8.746052 TCATCGGAAAAATCTAAACATATGGT 57.254 30.769 7.80 0.00 0.00 3.55
302 321 9.839817 TCATCGGAAAAATCTAAACATATGGTA 57.160 29.630 7.80 0.00 0.00 3.25
328 347 8.561738 AACATAGAAACATAGGTAAACTGGTG 57.438 34.615 0.00 0.00 0.00 4.17
329 348 7.110155 ACATAGAAACATAGGTAAACTGGTGG 58.890 38.462 0.00 0.00 0.00 4.61
330 349 4.918588 AGAAACATAGGTAAACTGGTGGG 58.081 43.478 0.00 0.00 0.00 4.61
333 352 4.503714 ACATAGGTAAACTGGTGGGATG 57.496 45.455 0.00 0.00 0.00 3.51
334 353 3.214328 CATAGGTAAACTGGTGGGATGC 58.786 50.000 0.00 0.00 0.00 3.91
335 354 1.072266 AGGTAAACTGGTGGGATGCA 58.928 50.000 0.00 0.00 0.00 3.96
338 357 2.630580 GGTAAACTGGTGGGATGCAAAA 59.369 45.455 0.00 0.00 0.00 2.44
340 359 3.473923 AAACTGGTGGGATGCAAAAAG 57.526 42.857 0.00 0.00 0.00 2.27
341 360 0.681175 ACTGGTGGGATGCAAAAAGC 59.319 50.000 0.00 0.00 45.96 3.51
343 362 2.170166 CTGGTGGGATGCAAAAAGCTA 58.830 47.619 0.00 0.00 45.94 3.32
370 489 5.880054 AATCTCATACTTTTGAACGGTGG 57.120 39.130 0.00 0.00 0.00 4.61
379 498 5.812286 ACTTTTGAACGGTGGGAGTAATAT 58.188 37.500 0.00 0.00 0.00 1.28
384 503 9.902684 TTTTGAACGGTGGGAGTAATATATAAA 57.097 29.630 0.00 0.00 0.00 1.40
390 509 8.529476 ACGGTGGGAGTAATATATAAAGATGTC 58.471 37.037 0.00 0.00 0.00 3.06
406 525 2.102070 TGTCGTGTGTCAACCAAAGT 57.898 45.000 0.00 0.00 0.00 2.66
410 529 4.142859 TGTCGTGTGTCAACCAAAGTAAAC 60.143 41.667 0.00 0.00 0.00 2.01
430 549 8.094548 AGTAAACAACTAGATGTAACATGCAGA 58.905 33.333 6.02 0.00 36.36 4.26
441 560 1.151668 ACATGCAGACACGAAAGCTC 58.848 50.000 0.00 0.00 0.00 4.09
457 576 5.359194 AAAGCTCGAGATTATGAAAGGGA 57.641 39.130 17.50 0.00 0.00 4.20
459 578 3.706594 AGCTCGAGATTATGAAAGGGACA 59.293 43.478 18.75 0.00 0.00 4.02
460 579 4.346418 AGCTCGAGATTATGAAAGGGACAT 59.654 41.667 18.75 0.00 0.00 3.06
461 580 4.688413 GCTCGAGATTATGAAAGGGACATC 59.312 45.833 18.75 0.00 0.00 3.06
462 581 5.510520 GCTCGAGATTATGAAAGGGACATCT 60.511 44.000 18.75 0.00 0.00 2.90
466 585 7.287927 TCGAGATTATGAAAGGGACATCTAGTT 59.712 37.037 0.00 0.00 0.00 2.24
468 587 7.512992 AGATTATGAAAGGGACATCTAGTTGG 58.487 38.462 5.80 0.00 0.00 3.77
473 592 5.250543 TGAAAGGGACATCTAGTTGGATTGA 59.749 40.000 5.80 0.00 0.00 2.57
479 598 5.235186 GGACATCTAGTTGGATTGATCAACG 59.765 44.000 11.07 0.00 46.36 4.10
497 616 6.908870 TCAACGACATGATCTAGATTTTGG 57.091 37.500 6.70 0.28 0.00 3.28
500 619 5.053145 ACGACATGATCTAGATTTTGGCTC 58.947 41.667 6.70 2.45 0.00 4.70
502 621 4.384056 ACATGATCTAGATTTTGGCTCCG 58.616 43.478 6.70 0.00 0.00 4.63
515 634 4.812476 CTCCGGCGCCAATGTCGA 62.812 66.667 28.98 10.00 0.00 4.20
548 670 9.802039 TGTTGATAAAATTAACTTAGGGTCAGT 57.198 29.630 0.00 0.00 30.85 3.41
558 680 6.819397 AACTTAGGGTCAGTTATTTTGAGC 57.181 37.500 0.00 0.00 41.17 4.26
559 681 5.876357 ACTTAGGGTCAGTTATTTTGAGCA 58.124 37.500 6.75 0.00 43.08 4.26
560 682 5.940470 ACTTAGGGTCAGTTATTTTGAGCAG 59.060 40.000 6.75 0.00 43.08 4.24
561 683 3.084786 AGGGTCAGTTATTTTGAGCAGC 58.915 45.455 6.75 0.00 43.08 5.25
562 684 3.084786 GGGTCAGTTATTTTGAGCAGCT 58.915 45.455 0.00 0.00 43.08 4.24
563 685 3.507622 GGGTCAGTTATTTTGAGCAGCTT 59.492 43.478 0.00 0.00 43.08 3.74
564 686 4.700213 GGGTCAGTTATTTTGAGCAGCTTA 59.300 41.667 0.00 0.00 43.08 3.09
565 687 5.183140 GGGTCAGTTATTTTGAGCAGCTTAA 59.817 40.000 0.00 0.00 43.08 1.85
566 688 6.294508 GGGTCAGTTATTTTGAGCAGCTTAAA 60.295 38.462 8.25 8.25 43.08 1.52
567 689 7.145323 GGTCAGTTATTTTGAGCAGCTTAAAA 58.855 34.615 23.18 23.18 41.44 1.52
568 690 7.651704 GGTCAGTTATTTTGAGCAGCTTAAAAA 59.348 33.333 24.34 19.68 41.44 1.94
585 707 2.443958 AAAATAAGCTGCCTCTCCCC 57.556 50.000 0.00 0.00 0.00 4.81
586 708 1.298953 AAATAAGCTGCCTCTCCCCA 58.701 50.000 0.00 0.00 0.00 4.96
587 709 0.842635 AATAAGCTGCCTCTCCCCAG 59.157 55.000 0.00 0.00 0.00 4.45
591 713 4.056805 CTGCCTCTCCCCAGCTTA 57.943 61.111 0.00 0.00 0.00 3.09
592 714 2.300996 CTGCCTCTCCCCAGCTTAA 58.699 57.895 0.00 0.00 0.00 1.85
593 715 0.620556 CTGCCTCTCCCCAGCTTAAA 59.379 55.000 0.00 0.00 0.00 1.52
594 716 1.004745 CTGCCTCTCCCCAGCTTAAAA 59.995 52.381 0.00 0.00 0.00 1.52
595 717 1.427368 TGCCTCTCCCCAGCTTAAAAA 59.573 47.619 0.00 0.00 0.00 1.94
618 740 8.546597 AAAAATAAGCCGCATTCTAAATTTGT 57.453 26.923 0.00 0.00 0.00 2.83
619 741 8.546597 AAAATAAGCCGCATTCTAAATTTGTT 57.453 26.923 0.00 0.00 0.00 2.83
620 742 7.524294 AATAAGCCGCATTCTAAATTTGTTG 57.476 32.000 0.00 0.00 0.00 3.33
621 743 4.782019 AGCCGCATTCTAAATTTGTTGA 57.218 36.364 0.00 0.00 0.00 3.18
622 744 4.737054 AGCCGCATTCTAAATTTGTTGAG 58.263 39.130 0.00 0.00 0.00 3.02
623 745 4.458989 AGCCGCATTCTAAATTTGTTGAGA 59.541 37.500 0.00 0.00 0.00 3.27
624 746 4.558860 GCCGCATTCTAAATTTGTTGAGAC 59.441 41.667 0.00 0.00 0.00 3.36
625 747 5.619981 GCCGCATTCTAAATTTGTTGAGACT 60.620 40.000 0.00 0.00 0.00 3.24
626 748 6.381801 CCGCATTCTAAATTTGTTGAGACTT 58.618 36.000 0.00 0.00 0.00 3.01
627 749 6.524586 CCGCATTCTAAATTTGTTGAGACTTC 59.475 38.462 0.00 0.00 0.00 3.01
628 750 7.301054 CGCATTCTAAATTTGTTGAGACTTCT 58.699 34.615 0.00 0.00 0.00 2.85
629 751 8.443160 CGCATTCTAAATTTGTTGAGACTTCTA 58.557 33.333 0.00 0.00 0.00 2.10
630 752 9.548208 GCATTCTAAATTTGTTGAGACTTCTAC 57.452 33.333 0.00 0.00 0.00 2.59
633 755 9.607988 TTCTAAATTTGTTGAGACTTCTACACA 57.392 29.630 0.00 0.00 38.48 3.72
634 756 9.778741 TCTAAATTTGTTGAGACTTCTACACAT 57.221 29.630 0.00 0.00 38.48 3.21
638 760 9.561069 AATTTGTTGAGACTTCTACACATTAGT 57.439 29.630 3.06 0.00 37.54 2.24
639 761 8.958119 TTTGTTGAGACTTCTACACATTAGTT 57.042 30.769 0.00 0.00 38.48 2.24
642 764 9.856488 TGTTGAGACTTCTACACATTAGTTATC 57.144 33.333 0.00 0.00 34.79 1.75
645 767 9.462606 TGAGACTTCTACACATTAGTTATCTCA 57.537 33.333 0.00 0.00 0.00 3.27
667 789 8.251721 TCTCATAACTTGTTTAGAAGTCCTAGC 58.748 37.037 0.00 0.00 35.01 3.42
668 790 7.033791 TCATAACTTGTTTAGAAGTCCTAGCG 58.966 38.462 0.00 0.00 35.01 4.26
669 791 5.464030 AACTTGTTTAGAAGTCCTAGCGA 57.536 39.130 0.00 0.00 35.01 4.93
670 792 5.464030 ACTTGTTTAGAAGTCCTAGCGAA 57.536 39.130 0.00 0.00 29.85 4.70
671 793 6.038997 ACTTGTTTAGAAGTCCTAGCGAAT 57.961 37.500 0.00 0.00 29.85 3.34
672 794 7.166691 ACTTGTTTAGAAGTCCTAGCGAATA 57.833 36.000 0.00 0.00 29.85 1.75
673 795 7.609056 ACTTGTTTAGAAGTCCTAGCGAATAA 58.391 34.615 0.00 0.00 29.85 1.40
674 796 8.092687 ACTTGTTTAGAAGTCCTAGCGAATAAA 58.907 33.333 0.00 0.00 29.85 1.40
675 797 8.836268 TTGTTTAGAAGTCCTAGCGAATAAAA 57.164 30.769 0.00 0.00 0.00 1.52
676 798 8.475331 TGTTTAGAAGTCCTAGCGAATAAAAG 57.525 34.615 0.00 0.00 0.00 2.27
677 799 8.308931 TGTTTAGAAGTCCTAGCGAATAAAAGA 58.691 33.333 0.00 0.00 0.00 2.52
678 800 8.593842 GTTTAGAAGTCCTAGCGAATAAAAGAC 58.406 37.037 0.00 0.00 0.00 3.01
679 801 6.282199 AGAAGTCCTAGCGAATAAAAGACA 57.718 37.500 0.00 0.00 0.00 3.41
680 802 6.100668 AGAAGTCCTAGCGAATAAAAGACAC 58.899 40.000 0.00 0.00 0.00 3.67
681 803 5.401531 AGTCCTAGCGAATAAAAGACACA 57.598 39.130 0.00 0.00 0.00 3.72
682 804 5.411781 AGTCCTAGCGAATAAAAGACACAG 58.588 41.667 0.00 0.00 0.00 3.66
683 805 4.033014 GTCCTAGCGAATAAAAGACACAGC 59.967 45.833 0.00 0.00 0.00 4.40
684 806 4.081642 TCCTAGCGAATAAAAGACACAGCT 60.082 41.667 0.00 0.00 37.48 4.24
685 807 4.631813 CCTAGCGAATAAAAGACACAGCTT 59.368 41.667 0.00 0.00 35.23 3.74
686 808 5.810587 CCTAGCGAATAAAAGACACAGCTTA 59.189 40.000 0.00 0.00 35.23 3.09
687 809 5.532025 AGCGAATAAAAGACACAGCTTAC 57.468 39.130 0.00 0.00 0.00 2.34
688 810 4.994852 AGCGAATAAAAGACACAGCTTACA 59.005 37.500 0.00 0.00 0.00 2.41
689 811 5.120830 AGCGAATAAAAGACACAGCTTACAG 59.879 40.000 0.00 0.00 0.00 2.74
690 812 5.671329 GCGAATAAAAGACACAGCTTACAGG 60.671 44.000 0.00 0.00 0.00 4.00
691 813 5.637810 CGAATAAAAGACACAGCTTACAGGA 59.362 40.000 0.00 0.00 0.00 3.86
692 814 6.147164 CGAATAAAAGACACAGCTTACAGGAA 59.853 38.462 0.00 0.00 0.00 3.36
693 815 7.307751 CGAATAAAAGACACAGCTTACAGGAAA 60.308 37.037 0.00 0.00 0.00 3.13
694 816 7.817418 ATAAAAGACACAGCTTACAGGAAAA 57.183 32.000 0.00 0.00 0.00 2.29
695 817 6.524101 AAAAGACACAGCTTACAGGAAAAA 57.476 33.333 0.00 0.00 0.00 1.94
711 833 1.182667 AAAAATGGGTAGAAGGCGGC 58.817 50.000 0.00 0.00 0.00 6.53
712 834 0.331616 AAAATGGGTAGAAGGCGGCT 59.668 50.000 5.25 5.25 0.00 5.52
713 835 0.331616 AAATGGGTAGAAGGCGGCTT 59.668 50.000 25.83 25.83 0.00 4.35
714 836 1.209621 AATGGGTAGAAGGCGGCTTA 58.790 50.000 25.59 7.22 0.00 3.09
715 837 1.435256 ATGGGTAGAAGGCGGCTTAT 58.565 50.000 25.59 24.12 0.00 1.73
716 838 1.209621 TGGGTAGAAGGCGGCTTATT 58.790 50.000 25.59 17.72 0.00 1.40
717 839 1.562475 TGGGTAGAAGGCGGCTTATTT 59.438 47.619 25.59 15.21 0.00 1.40
718 840 2.025699 TGGGTAGAAGGCGGCTTATTTT 60.026 45.455 25.59 12.75 0.00 1.82
719 841 3.021695 GGGTAGAAGGCGGCTTATTTTT 58.978 45.455 25.59 10.33 0.00 1.94
739 861 6.616774 TTTTTAAGCTGCCAAAAGAATTGG 57.383 33.333 2.84 2.84 42.37 3.16
740 862 2.845363 AAGCTGCCAAAAGAATTGGG 57.155 45.000 9.12 0.00 39.90 4.12
741 863 0.322648 AGCTGCCAAAAGAATTGGGC 59.677 50.000 9.12 3.46 46.20 5.36
742 864 0.674581 GCTGCCAAAAGAATTGGGCC 60.675 55.000 9.12 0.00 45.65 5.80
743 865 0.978907 CTGCCAAAAGAATTGGGCCT 59.021 50.000 4.53 0.00 45.65 5.19
744 866 2.178580 CTGCCAAAAGAATTGGGCCTA 58.821 47.619 4.53 0.00 45.65 3.93
745 867 2.566724 CTGCCAAAAGAATTGGGCCTAA 59.433 45.455 3.11 3.11 45.65 2.69
746 868 2.566724 TGCCAAAAGAATTGGGCCTAAG 59.433 45.455 7.87 0.00 45.65 2.18
747 869 2.567169 GCCAAAAGAATTGGGCCTAAGT 59.433 45.455 7.87 4.09 41.85 2.24
748 870 3.007940 GCCAAAAGAATTGGGCCTAAGTT 59.992 43.478 7.87 2.03 41.85 2.66
767 889 3.128938 AGTTACCGAAGAAGAGGTCGATG 59.871 47.826 0.00 0.00 41.63 3.84
785 907 3.125146 CGATGGAGCAAGTTCAAATTCGA 59.875 43.478 0.00 0.00 0.00 3.71
817 943 2.653726 TGAAGTCAGAAGCAAGGCAAA 58.346 42.857 0.00 0.00 0.00 3.68
820 946 0.600057 GTCAGAAGCAAGGCAAAGGG 59.400 55.000 0.00 0.00 0.00 3.95
823 949 1.688197 CAGAAGCAAGGCAAAGGGAAA 59.312 47.619 0.00 0.00 0.00 3.13
825 951 1.001293 GAAGCAAGGCAAAGGGAAAGG 59.999 52.381 0.00 0.00 0.00 3.11
852 987 3.961414 TCCTTTGGCCCGGGTGTC 61.961 66.667 24.63 12.93 0.00 3.67
863 998 3.468140 GGGTGTCGGCCTCCTACC 61.468 72.222 0.00 3.88 0.00 3.18
876 1011 1.489649 CTCCTACCGGGTCTCACTCTA 59.510 57.143 6.32 0.00 36.25 2.43
877 1012 1.211457 TCCTACCGGGTCTCACTCTAC 59.789 57.143 6.32 0.00 36.25 2.59
879 1014 1.212441 CTACCGGGTCTCACTCTACCT 59.788 57.143 6.32 0.00 35.97 3.08
880 1015 0.323542 ACCGGGTCTCACTCTACCTG 60.324 60.000 6.32 0.00 41.13 4.00
881 1016 1.668101 CCGGGTCTCACTCTACCTGC 61.668 65.000 0.00 0.00 40.28 4.85
882 1017 1.668101 CGGGTCTCACTCTACCTGCC 61.668 65.000 0.00 0.00 35.43 4.85
883 1018 1.331399 GGGTCTCACTCTACCTGCCC 61.331 65.000 0.00 0.00 35.97 5.36
884 1019 0.614979 GGTCTCACTCTACCTGCCCA 60.615 60.000 0.00 0.00 32.72 5.36
885 1020 1.490574 GTCTCACTCTACCTGCCCAT 58.509 55.000 0.00 0.00 0.00 4.00
886 1021 1.834263 GTCTCACTCTACCTGCCCATT 59.166 52.381 0.00 0.00 0.00 3.16
887 1022 2.237392 GTCTCACTCTACCTGCCCATTT 59.763 50.000 0.00 0.00 0.00 2.32
888 1023 2.501723 TCTCACTCTACCTGCCCATTTC 59.498 50.000 0.00 0.00 0.00 2.17
889 1024 1.559682 TCACTCTACCTGCCCATTTCC 59.440 52.381 0.00 0.00 0.00 3.13
890 1025 0.919710 ACTCTACCTGCCCATTTCCC 59.080 55.000 0.00 0.00 0.00 3.97
891 1026 0.183731 CTCTACCTGCCCATTTCCCC 59.816 60.000 0.00 0.00 0.00 4.81
892 1027 0.253630 TCTACCTGCCCATTTCCCCT 60.254 55.000 0.00 0.00 0.00 4.79
893 1028 1.010294 TCTACCTGCCCATTTCCCCTA 59.990 52.381 0.00 0.00 0.00 3.53
894 1029 1.850345 CTACCTGCCCATTTCCCCTAA 59.150 52.381 0.00 0.00 0.00 2.69
895 1030 1.089123 ACCTGCCCATTTCCCCTAAA 58.911 50.000 0.00 0.00 0.00 1.85
896 1031 1.435168 ACCTGCCCATTTCCCCTAAAA 59.565 47.619 0.00 0.00 0.00 1.52
897 1032 2.158081 ACCTGCCCATTTCCCCTAAAAA 60.158 45.455 0.00 0.00 0.00 1.94
932 1067 3.979497 CCGCCCTTTTCACCCCCT 61.979 66.667 0.00 0.00 0.00 4.79
933 1068 2.117423 CGCCCTTTTCACCCCCTT 59.883 61.111 0.00 0.00 0.00 3.95
954 1089 4.630644 TCACATTCCAGAAGCTTCTTCT 57.369 40.909 26.44 2.96 34.74 2.85
1127 1280 0.109132 CAACCCTTGGATTTGCTCGC 60.109 55.000 0.00 0.00 0.00 5.03
1206 1359 4.776322 TCCGCGGCATCAAGGGTG 62.776 66.667 23.51 0.00 0.00 4.61
1225 1385 1.267121 GAGGCCCTCCGCATCTAATA 58.733 55.000 0.00 0.00 44.95 0.98
1230 1390 1.003233 CCCTCCGCATCTAATAACCCC 59.997 57.143 0.00 0.00 0.00 4.95
1231 1391 1.003233 CCTCCGCATCTAATAACCCCC 59.997 57.143 0.00 0.00 0.00 5.40
1429 1619 0.955428 TGCGACCTGTGGCTGAAATC 60.955 55.000 5.88 0.00 35.25 2.17
1468 1705 1.078426 AGTGGCGATTTCTTCCCGG 60.078 57.895 0.00 0.00 0.00 5.73
1528 1765 9.613428 TCGATGATTCCAAAATAAGATTGTACT 57.387 29.630 0.00 0.00 0.00 2.73
1754 1999 5.925189 AATTTGTTCGTTTTCAGTTCACG 57.075 34.783 0.00 0.00 35.18 4.35
1755 2000 2.445453 TGTTCGTTTTCAGTTCACGC 57.555 45.000 0.00 0.00 33.85 5.34
1757 2002 1.329599 GTTCGTTTTCAGTTCACGCCT 59.670 47.619 0.00 0.00 33.85 5.52
1758 2003 0.934496 TCGTTTTCAGTTCACGCCTG 59.066 50.000 0.00 0.00 33.85 4.85
1899 2151 0.257039 CCTATGGCAACCTTCCTGCT 59.743 55.000 0.00 0.00 39.82 4.24
1978 2230 3.072944 AGTCTTCTTCATTCAGCTGCAC 58.927 45.455 9.47 0.00 0.00 4.57
1979 2231 3.072944 GTCTTCTTCATTCAGCTGCACT 58.927 45.455 9.47 0.00 0.00 4.40
2029 2796 5.997746 CCTTCATTGTTACTTTCCTCTGTCA 59.002 40.000 0.00 0.00 0.00 3.58
2070 2842 2.684843 GCTCAGGTTGCCTTGCTCG 61.685 63.158 0.00 0.00 31.01 5.03
2189 2961 1.526315 TCTGGAGGGAATGCCATCAT 58.474 50.000 6.74 0.00 46.64 2.45
2398 3625 3.124466 TCGTGTTGCGACCAATCTATTTG 59.876 43.478 0.45 0.00 45.68 2.32
2482 3715 7.887996 TGCTATTTTGTTTTAGCCATTGAAG 57.112 32.000 0.00 0.00 40.07 3.02
2509 3821 2.726821 TCCCAAGAAATGCCTGCTTAG 58.273 47.619 0.00 0.00 0.00 2.18
2559 3871 8.548721 GGGTATCTGTTTCATACACTATTTTCG 58.451 37.037 0.00 0.00 32.10 3.46
2562 3874 7.591006 TCTGTTTCATACACTATTTTCGTCC 57.409 36.000 0.00 0.00 32.10 4.79
2620 3933 6.952773 TTATGGTATCTGTTTATGGCAACC 57.047 37.500 0.00 0.00 0.00 3.77
2655 3974 1.818674 GTCAGGGAAATGCGAACCAAT 59.181 47.619 0.00 0.00 0.00 3.16
2848 4168 1.001378 GACACCAATCGCTTTTGCTGT 60.001 47.619 0.00 0.00 44.80 4.40
2865 4185 2.095364 GCTGTTCAGAAAGGACATGCTG 60.095 50.000 3.84 0.00 0.00 4.41
2990 4320 3.283751 ACGTTCTCAAATTGTTCCCACA 58.716 40.909 0.00 0.00 0.00 4.17
2999 4329 7.015098 TCTCAAATTGTTCCCACATGTATTTGT 59.985 33.333 19.76 0.00 38.58 2.83
3135 4465 0.953727 GTCACTGGCTCACAAATGCA 59.046 50.000 0.00 0.00 0.00 3.96
3148 4478 0.684153 AAATGCATGGAGGGTTCCCG 60.684 55.000 0.00 0.00 43.33 5.14
3386 4772 4.212636 CAGCTCTTTTTCCCTTGCAAATTG 59.787 41.667 0.00 0.00 0.00 2.32
3606 5002 8.981647 ACTGATGTTTGATTTAGTCATTTTTGC 58.018 29.630 0.00 0.00 36.54 3.68
3630 5030 9.755804 TGCATTAACAACTAAACAAATGATTGA 57.244 25.926 0.00 0.00 38.94 2.57
3832 5269 4.695455 TGTGTCTTGCTTGGCTTTATAGTC 59.305 41.667 0.00 0.00 0.00 2.59
3843 5280 6.866010 TGGCTTTATAGTCATATGCAACAG 57.134 37.500 0.00 0.00 29.10 3.16
3857 5297 8.088365 TCATATGCAACAGCTATACGAGTTATT 58.912 33.333 0.00 0.00 0.00 1.40
3914 5354 6.215845 ACAAATAAAAGGCTGTGCTAAGTTG 58.784 36.000 0.00 0.00 0.00 3.16
4001 9534 6.823286 TGGTGGGATAGTGAATCAATAGAA 57.177 37.500 0.00 0.00 36.20 2.10
4057 9590 6.806751 TGTAGGAGTTATGATGCAAGTAGAC 58.193 40.000 0.00 0.00 0.00 2.59
4113 9649 3.954258 AGGCTGTGCTAAGTGAACTTTTT 59.046 39.130 0.21 0.00 37.40 1.94
4400 9940 3.423539 TCAAGCAGCTTGAGGTATGTT 57.576 42.857 30.44 0.00 44.27 2.71
4550 10095 0.955919 GCCTGCTTTGCGGTCTAAGT 60.956 55.000 0.00 0.00 32.22 2.24
4644 10189 8.556213 TTCATTAACAGGTGTACCAATTAGTC 57.444 34.615 3.56 0.00 38.89 2.59
4816 13705 9.838339 CCTGTAATCATTTGTAATCCTAGTCTT 57.162 33.333 0.00 0.00 0.00 3.01
4829 13718 4.794334 TCCTAGTCTTTAGGCTAGTCCTG 58.206 47.826 15.22 2.84 46.98 3.86
4841 13730 3.712218 GGCTAGTCCTGTTCCTTAGGATT 59.288 47.826 0.12 0.00 45.50 3.01
4850 13739 4.346730 TGTTCCTTAGGATTCACTACCGA 58.653 43.478 0.12 0.00 0.00 4.69
4874 13763 3.193267 TCATGCTACATGCCTTTTTCCAC 59.807 43.478 2.65 0.00 42.00 4.02
4901 13790 8.949177 GGTAGTTAGTTAGACCAGCTCTATATC 58.051 40.741 0.00 0.00 31.11 1.63
4927 13816 3.656559 ACGGGACATGTAGTGTAAACAC 58.343 45.455 0.00 5.07 42.36 3.32
4955 13844 5.520288 ACACTGAATATACAAGTTAGCTGCG 59.480 40.000 0.00 0.00 0.00 5.18
4968 13857 1.953559 AGCTGCGACTGTTTCTTGAA 58.046 45.000 0.00 0.00 0.00 2.69
5042 13931 8.948631 ACACACATTAGACCTCTTAATATGTG 57.051 34.615 12.35 12.35 44.11 3.21
5097 13990 3.028130 ACAATTTTGTCCAAACGAGGGT 58.972 40.909 0.00 0.00 36.50 4.34
5119 14012 2.036387 TCTGACCTGAAACGACAAGGA 58.964 47.619 0.00 0.00 0.00 3.36
5122 14015 2.223971 TGACCTGAAACGACAAGGAGAC 60.224 50.000 0.00 0.00 0.00 3.36
5152 14450 7.859875 GCATTTAAGAAGCAGGATTATCTGAAC 59.140 37.037 0.00 0.00 36.93 3.18
5158 14456 2.156504 GCAGGATTATCTGAACGCATCG 59.843 50.000 0.00 0.00 36.93 3.84
5196 14494 6.715264 CAGGTATATTCTCGGGCCTTTTATTT 59.285 38.462 0.84 0.00 0.00 1.40
5246 14544 1.453155 CGGGAAACATGTTCCTCCAG 58.547 55.000 24.21 18.79 38.61 3.86
5254 14552 6.127897 GGAAACATGTTCCTCCAGTAGAATTG 60.128 42.308 20.02 0.00 35.73 2.32
5307 14607 8.374743 ACCTTGGCAATGTCTAAAAATTAACAT 58.625 29.630 0.00 0.00 33.92 2.71
5336 14649 5.056480 TCGATCATAATGCTAACCTGTTGG 58.944 41.667 0.00 0.00 39.83 3.77
5776 15300 1.933853 CAAAGGCACACTATCGGCTAC 59.066 52.381 0.00 0.00 36.97 3.58
5779 15303 1.226859 GCACACTATCGGCTACGCA 60.227 57.895 0.00 0.00 40.69 5.24
5915 15536 1.606668 GGTGCCTATCAGTCTCTCTCG 59.393 57.143 0.00 0.00 0.00 4.04
5982 15603 7.540474 TTGTTCTGGTAAGAGATACTTCTGT 57.460 36.000 0.00 0.00 39.72 3.41
5998 16651 4.935808 ACTTCTGTCTTCTTGTGTTTCGTT 59.064 37.500 0.00 0.00 0.00 3.85
6029 16683 7.752686 GCTTGGTAGAATTCAGTTCTTTTCATC 59.247 37.037 8.44 0.00 44.80 2.92
6030 16684 7.364522 TGGTAGAATTCAGTTCTTTTCATCG 57.635 36.000 8.44 0.00 44.80 3.84
6057 16979 9.539825 TTCTGATCAGCTGATAAGAGATAAAAC 57.460 33.333 33.06 16.99 41.71 2.43
6124 17046 3.054802 TGTTTTGGGTGTTTGCCATCTTT 60.055 39.130 0.00 0.00 0.00 2.52
6149 17071 5.294552 GGTAGAATCCAGTTCTTCATTTCCG 59.705 44.000 0.00 0.00 44.80 4.30
6273 17195 3.202906 CCTGTTCTCTCGGACAAAAACA 58.797 45.455 0.00 0.00 0.00 2.83
6439 17361 5.163488 GGCAGTGGATGATGAATTGAATTGA 60.163 40.000 0.00 0.00 0.00 2.57
6461 17383 8.420374 TTGACTAAGTTAGAGTGAAGTGTTTG 57.580 34.615 16.89 0.00 0.00 2.93
6462 17384 6.984474 TGACTAAGTTAGAGTGAAGTGTTTGG 59.016 38.462 16.89 0.00 0.00 3.28
6463 17385 6.885922 ACTAAGTTAGAGTGAAGTGTTTGGT 58.114 36.000 16.89 0.00 0.00 3.67
6464 17386 7.336396 ACTAAGTTAGAGTGAAGTGTTTGGTT 58.664 34.615 16.89 0.00 0.00 3.67
6465 17387 6.436843 AAGTTAGAGTGAAGTGTTTGGTTG 57.563 37.500 0.00 0.00 0.00 3.77
6466 17388 5.741011 AGTTAGAGTGAAGTGTTTGGTTGA 58.259 37.500 0.00 0.00 0.00 3.18
6467 17389 6.177610 AGTTAGAGTGAAGTGTTTGGTTGAA 58.822 36.000 0.00 0.00 0.00 2.69
6468 17390 6.316390 AGTTAGAGTGAAGTGTTTGGTTGAAG 59.684 38.462 0.00 0.00 0.00 3.02
6469 17391 4.843728 AGAGTGAAGTGTTTGGTTGAAGA 58.156 39.130 0.00 0.00 0.00 2.87
6470 17392 5.440610 AGAGTGAAGTGTTTGGTTGAAGAT 58.559 37.500 0.00 0.00 0.00 2.40
6471 17393 5.888161 AGAGTGAAGTGTTTGGTTGAAGATT 59.112 36.000 0.00 0.00 0.00 2.40
6472 17394 5.894807 AGTGAAGTGTTTGGTTGAAGATTG 58.105 37.500 0.00 0.00 0.00 2.67
6473 17395 5.418840 AGTGAAGTGTTTGGTTGAAGATTGT 59.581 36.000 0.00 0.00 0.00 2.71
6474 17396 5.516339 GTGAAGTGTTTGGTTGAAGATTGTG 59.484 40.000 0.00 0.00 0.00 3.33
6475 17397 4.654091 AGTGTTTGGTTGAAGATTGTGG 57.346 40.909 0.00 0.00 0.00 4.17
6476 17398 4.023291 AGTGTTTGGTTGAAGATTGTGGT 58.977 39.130 0.00 0.00 0.00 4.16
6477 17399 5.197451 AGTGTTTGGTTGAAGATTGTGGTA 58.803 37.500 0.00 0.00 0.00 3.25
6478 17400 5.833131 AGTGTTTGGTTGAAGATTGTGGTAT 59.167 36.000 0.00 0.00 0.00 2.73
6479 17401 6.323739 AGTGTTTGGTTGAAGATTGTGGTATT 59.676 34.615 0.00 0.00 0.00 1.89
6480 17402 6.420604 GTGTTTGGTTGAAGATTGTGGTATTG 59.579 38.462 0.00 0.00 0.00 1.90
6481 17403 4.782019 TGGTTGAAGATTGTGGTATTGC 57.218 40.909 0.00 0.00 0.00 3.56
6482 17404 4.148079 TGGTTGAAGATTGTGGTATTGCA 58.852 39.130 0.00 0.00 0.00 4.08
6483 17405 4.771577 TGGTTGAAGATTGTGGTATTGCAT 59.228 37.500 0.00 0.00 0.00 3.96
6484 17406 5.245751 TGGTTGAAGATTGTGGTATTGCATT 59.754 36.000 0.00 0.00 0.00 3.56
6485 17407 6.165577 GGTTGAAGATTGTGGTATTGCATTT 58.834 36.000 0.00 0.00 0.00 2.32
6486 17408 6.091169 GGTTGAAGATTGTGGTATTGCATTTG 59.909 38.462 0.00 0.00 0.00 2.32
6487 17409 5.170021 TGAAGATTGTGGTATTGCATTTGC 58.830 37.500 0.00 0.00 42.50 3.68
6488 17410 4.127566 AGATTGTGGTATTGCATTTGCC 57.872 40.909 0.00 0.00 41.18 4.52
6489 17411 3.514706 AGATTGTGGTATTGCATTTGCCA 59.485 39.130 3.32 3.32 41.18 4.92
6490 17412 3.316071 TTGTGGTATTGCATTTGCCAG 57.684 42.857 7.15 0.00 41.18 4.85
6491 17413 2.246469 TGTGGTATTGCATTTGCCAGT 58.754 42.857 7.15 0.00 41.18 4.00
6492 17414 2.632028 TGTGGTATTGCATTTGCCAGTT 59.368 40.909 7.15 0.00 41.18 3.16
6493 17415 3.253230 GTGGTATTGCATTTGCCAGTTC 58.747 45.455 7.15 0.00 41.18 3.01
6494 17416 2.233431 TGGTATTGCATTTGCCAGTTCC 59.767 45.455 3.32 0.00 41.18 3.62
6495 17417 2.418609 GGTATTGCATTTGCCAGTTCCC 60.419 50.000 0.00 0.00 41.18 3.97
6496 17418 1.350071 ATTGCATTTGCCAGTTCCCA 58.650 45.000 0.00 0.00 41.18 4.37
6497 17419 1.350071 TTGCATTTGCCAGTTCCCAT 58.650 45.000 0.00 0.00 41.18 4.00
6498 17420 2.228545 TGCATTTGCCAGTTCCCATA 57.771 45.000 0.00 0.00 41.18 2.74
6499 17421 2.749600 TGCATTTGCCAGTTCCCATAT 58.250 42.857 0.00 0.00 41.18 1.78
6500 17422 3.106054 TGCATTTGCCAGTTCCCATATT 58.894 40.909 0.00 0.00 41.18 1.28
6501 17423 3.518705 TGCATTTGCCAGTTCCCATATTT 59.481 39.130 0.00 0.00 41.18 1.40
6502 17424 4.019501 TGCATTTGCCAGTTCCCATATTTT 60.020 37.500 0.00 0.00 41.18 1.82
6503 17425 4.333372 GCATTTGCCAGTTCCCATATTTTG 59.667 41.667 0.00 0.00 34.31 2.44
6504 17426 3.608316 TTGCCAGTTCCCATATTTTGC 57.392 42.857 0.00 0.00 0.00 3.68
6505 17427 2.533916 TGCCAGTTCCCATATTTTGCA 58.466 42.857 0.00 0.00 0.00 4.08
6506 17428 2.233431 TGCCAGTTCCCATATTTTGCAC 59.767 45.455 0.00 0.00 0.00 4.57
6507 17429 2.497273 GCCAGTTCCCATATTTTGCACT 59.503 45.455 0.00 0.00 0.00 4.40
6508 17430 3.676873 GCCAGTTCCCATATTTTGCACTG 60.677 47.826 0.00 0.00 0.00 3.66
6509 17431 3.511146 CCAGTTCCCATATTTTGCACTGT 59.489 43.478 0.00 0.00 30.21 3.55
6510 17432 4.380867 CCAGTTCCCATATTTTGCACTGTC 60.381 45.833 0.00 0.00 30.21 3.51
6511 17433 3.763897 AGTTCCCATATTTTGCACTGTCC 59.236 43.478 0.00 0.00 0.00 4.02
6512 17434 3.448093 TCCCATATTTTGCACTGTCCA 57.552 42.857 0.00 0.00 0.00 4.02
6513 17435 3.772387 TCCCATATTTTGCACTGTCCAA 58.228 40.909 0.00 0.00 0.00 3.53
6514 17436 4.352009 TCCCATATTTTGCACTGTCCAAT 58.648 39.130 0.00 0.00 0.00 3.16
6515 17437 4.402155 TCCCATATTTTGCACTGTCCAATC 59.598 41.667 0.00 0.00 0.00 2.67
6516 17438 4.403432 CCCATATTTTGCACTGTCCAATCT 59.597 41.667 0.00 0.00 0.00 2.40
6517 17439 5.450965 CCCATATTTTGCACTGTCCAATCTC 60.451 44.000 0.00 0.00 0.00 2.75
6518 17440 5.359009 CCATATTTTGCACTGTCCAATCTCT 59.641 40.000 0.00 0.00 0.00 3.10
6519 17441 4.778534 ATTTTGCACTGTCCAATCTCTG 57.221 40.909 0.00 0.00 0.00 3.35
6520 17442 2.936919 TTGCACTGTCCAATCTCTGT 57.063 45.000 0.00 0.00 0.00 3.41
6521 17443 4.350368 TTTGCACTGTCCAATCTCTGTA 57.650 40.909 0.00 0.00 0.00 2.74
6522 17444 3.319137 TGCACTGTCCAATCTCTGTAC 57.681 47.619 0.00 0.00 0.00 2.90
6523 17445 2.028112 TGCACTGTCCAATCTCTGTACC 60.028 50.000 0.00 0.00 0.00 3.34
6524 17446 2.678190 GCACTGTCCAATCTCTGTACCC 60.678 54.545 0.00 0.00 0.00 3.69
6525 17447 2.834549 CACTGTCCAATCTCTGTACCCT 59.165 50.000 0.00 0.00 0.00 4.34
6526 17448 4.023980 CACTGTCCAATCTCTGTACCCTA 58.976 47.826 0.00 0.00 0.00 3.53
6527 17449 4.024670 ACTGTCCAATCTCTGTACCCTAC 58.975 47.826 0.00 0.00 0.00 3.18
6528 17450 4.264442 ACTGTCCAATCTCTGTACCCTACT 60.264 45.833 0.00 0.00 0.00 2.57
6529 17451 4.023980 TGTCCAATCTCTGTACCCTACTG 58.976 47.826 0.00 0.00 0.00 2.74
6530 17452 4.264217 TGTCCAATCTCTGTACCCTACTGA 60.264 45.833 0.00 0.00 35.69 3.41
6535 17457 3.724508 CTCTGTACCCTACTGAGCATG 57.275 52.381 4.07 0.00 44.15 4.06
6536 17458 3.027412 CTCTGTACCCTACTGAGCATGT 58.973 50.000 0.00 0.00 44.15 3.21
6537 17459 4.207955 CTCTGTACCCTACTGAGCATGTA 58.792 47.826 0.00 0.00 44.15 2.29
6538 17460 4.606210 TCTGTACCCTACTGAGCATGTAA 58.394 43.478 0.00 0.00 33.52 2.41
6539 17461 5.020795 TCTGTACCCTACTGAGCATGTAAA 58.979 41.667 0.00 0.00 33.52 2.01
6540 17462 5.080969 TGTACCCTACTGAGCATGTAAAC 57.919 43.478 0.00 0.00 0.00 2.01
6541 17463 3.629142 ACCCTACTGAGCATGTAAACC 57.371 47.619 0.00 0.00 0.00 3.27
6542 17464 2.238898 ACCCTACTGAGCATGTAAACCC 59.761 50.000 0.00 0.00 0.00 4.11
6543 17465 2.505819 CCCTACTGAGCATGTAAACCCT 59.494 50.000 0.00 0.00 0.00 4.34
6544 17466 3.709653 CCCTACTGAGCATGTAAACCCTA 59.290 47.826 0.00 0.00 0.00 3.53
6545 17467 4.202264 CCCTACTGAGCATGTAAACCCTAG 60.202 50.000 0.00 0.00 0.00 3.02
6546 17468 4.406003 CCTACTGAGCATGTAAACCCTAGT 59.594 45.833 0.00 0.00 0.00 2.57
6547 17469 5.597182 CCTACTGAGCATGTAAACCCTAGTA 59.403 44.000 0.00 0.00 0.00 1.82
6548 17470 6.267928 CCTACTGAGCATGTAAACCCTAGTAT 59.732 42.308 0.00 0.00 0.00 2.12
6549 17471 6.561519 ACTGAGCATGTAAACCCTAGTATT 57.438 37.500 0.00 0.00 0.00 1.89
6550 17472 6.958767 ACTGAGCATGTAAACCCTAGTATTT 58.041 36.000 0.00 0.00 0.00 1.40
6820 17750 2.043652 AAGGCGCCATTGCTCCAT 60.044 55.556 31.54 0.00 45.13 3.41
6826 17766 1.940752 GCGCCATTGCTCCATGTTTTT 60.941 47.619 0.00 0.00 34.43 1.94
6830 17770 3.557686 GCCATTGCTCCATGTTTTTCCTT 60.558 43.478 0.00 0.00 33.53 3.36
6920 18139 1.187567 GCTCCCAGGTTGTTGCCATT 61.188 55.000 0.00 0.00 0.00 3.16
6995 20266 0.038526 AGGTCGTCGATGTTGTGGAC 60.039 55.000 4.21 0.00 32.75 4.02
7097 20445 4.142160 TGACAGTTCCAGAATAGATGGACG 60.142 45.833 0.00 0.00 46.46 4.79
7104 20452 3.307269 CCAGAATAGATGGACGCATGGAT 60.307 47.826 0.00 0.00 40.51 3.41
7161 20509 2.092212 AGTAGGAGTTTGGCCATCCATG 60.092 50.000 23.00 0.00 43.05 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 9.988815 GTTAAGTGATATGTCTCCAATGTATCT 57.011 33.333 0.00 0.00 0.00 1.98
47 48 9.764363 TGTTAAGTGATATGTCTCCAATGTATC 57.236 33.333 0.00 0.00 0.00 2.24
48 49 9.770097 CTGTTAAGTGATATGTCTCCAATGTAT 57.230 33.333 0.00 0.00 0.00 2.29
49 50 8.758829 ACTGTTAAGTGATATGTCTCCAATGTA 58.241 33.333 0.00 0.00 34.48 2.29
50 51 7.624549 ACTGTTAAGTGATATGTCTCCAATGT 58.375 34.615 0.00 0.00 34.48 2.71
82 83 7.931578 ACTCCCTCTCTCATAATATAAGACG 57.068 40.000 0.00 0.00 0.00 4.18
93 94 4.141287 CACGAATCTACTCCCTCTCTCAT 58.859 47.826 0.00 0.00 0.00 2.90
97 101 2.619646 GACCACGAATCTACTCCCTCTC 59.380 54.545 0.00 0.00 0.00 3.20
105 109 3.000727 CCACTTTGGACCACGAATCTAC 58.999 50.000 0.00 0.00 40.96 2.59
113 117 1.134175 CACAACACCACTTTGGACCAC 59.866 52.381 0.00 0.00 40.96 4.16
125 129 1.295792 ACGACACACATCACAACACC 58.704 50.000 0.00 0.00 0.00 4.16
127 131 3.427193 CGATAACGACACACATCACAACA 59.573 43.478 0.00 0.00 42.66 3.33
128 132 3.427528 ACGATAACGACACACATCACAAC 59.572 43.478 0.00 0.00 42.66 3.32
138 142 1.645751 GTCCGTCAACGATAACGACAC 59.354 52.381 3.71 3.40 41.29 3.67
149 153 1.268539 CCTTTGCTTGTGTCCGTCAAC 60.269 52.381 0.00 0.00 0.00 3.18
150 154 1.021202 CCTTTGCTTGTGTCCGTCAA 58.979 50.000 0.00 0.00 0.00 3.18
152 156 1.282875 GCCTTTGCTTGTGTCCGTC 59.717 57.895 0.00 0.00 33.53 4.79
153 157 0.823356 ATGCCTTTGCTTGTGTCCGT 60.823 50.000 0.00 0.00 38.71 4.69
154 158 0.314935 AATGCCTTTGCTTGTGTCCG 59.685 50.000 0.00 0.00 38.71 4.79
155 159 1.340889 TGAATGCCTTTGCTTGTGTCC 59.659 47.619 0.00 0.00 38.71 4.02
161 165 4.374399 CTCACTTTTGAATGCCTTTGCTT 58.626 39.130 0.00 0.00 38.71 3.91
179 183 0.525242 CTCTCGCAGTAGCAGCTCAC 60.525 60.000 0.00 0.00 42.27 3.51
184 188 3.839293 AGTAAAACTCTCGCAGTAGCAG 58.161 45.455 0.00 0.00 42.27 4.24
188 192 5.936372 TCTCACTAGTAAAACTCTCGCAGTA 59.064 40.000 0.00 0.00 32.30 2.74
196 208 9.570488 AAATGTATCGTCTCACTAGTAAAACTC 57.430 33.333 0.00 0.00 0.00 3.01
198 210 9.953825 CAAAATGTATCGTCTCACTAGTAAAAC 57.046 33.333 0.00 0.00 0.00 2.43
206 218 6.485313 TGAAAACCAAAATGTATCGTCTCACT 59.515 34.615 0.00 0.00 0.00 3.41
250 262 7.368198 ACCAAACCAACATTTACCTATGTTT 57.632 32.000 0.00 0.00 44.18 2.83
257 269 6.262601 CGATGATACCAAACCAACATTTACC 58.737 40.000 0.00 0.00 0.00 2.85
302 321 9.010029 CACCAGTTTACCTATGTTTCTATGTTT 57.990 33.333 0.00 0.00 0.00 2.83
303 322 7.610305 CCACCAGTTTACCTATGTTTCTATGTT 59.390 37.037 0.00 0.00 0.00 2.71
304 323 7.110155 CCACCAGTTTACCTATGTTTCTATGT 58.890 38.462 0.00 0.00 0.00 2.29
305 324 6.542370 CCCACCAGTTTACCTATGTTTCTATG 59.458 42.308 0.00 0.00 0.00 2.23
306 325 6.445786 TCCCACCAGTTTACCTATGTTTCTAT 59.554 38.462 0.00 0.00 0.00 1.98
308 327 4.600111 TCCCACCAGTTTACCTATGTTTCT 59.400 41.667 0.00 0.00 0.00 2.52
311 330 4.855340 CATCCCACCAGTTTACCTATGTT 58.145 43.478 0.00 0.00 0.00 2.71
312 331 3.371595 GCATCCCACCAGTTTACCTATGT 60.372 47.826 0.00 0.00 0.00 2.29
314 333 2.849943 TGCATCCCACCAGTTTACCTAT 59.150 45.455 0.00 0.00 0.00 2.57
315 334 2.270858 TGCATCCCACCAGTTTACCTA 58.729 47.619 0.00 0.00 0.00 3.08
316 335 1.072266 TGCATCCCACCAGTTTACCT 58.928 50.000 0.00 0.00 0.00 3.08
317 336 1.917872 TTGCATCCCACCAGTTTACC 58.082 50.000 0.00 0.00 0.00 2.85
319 338 3.244044 GCTTTTTGCATCCCACCAGTTTA 60.244 43.478 0.00 0.00 42.31 2.01
320 339 2.485302 GCTTTTTGCATCCCACCAGTTT 60.485 45.455 0.00 0.00 42.31 2.66
321 340 1.070601 GCTTTTTGCATCCCACCAGTT 59.929 47.619 0.00 0.00 42.31 3.16
322 341 0.681175 GCTTTTTGCATCCCACCAGT 59.319 50.000 0.00 0.00 42.31 4.00
324 343 2.300956 TAGCTTTTTGCATCCCACCA 57.699 45.000 0.00 0.00 45.94 4.17
325 344 3.676291 TTTAGCTTTTTGCATCCCACC 57.324 42.857 0.00 0.00 45.94 4.61
348 467 4.700213 CCCACCGTTCAAAAGTATGAGATT 59.300 41.667 0.00 0.00 0.00 2.40
353 472 3.408634 ACTCCCACCGTTCAAAAGTATG 58.591 45.455 0.00 0.00 0.00 2.39
363 482 8.877195 ACATCTTTATATATTACTCCCACCGTT 58.123 33.333 0.00 0.00 0.00 4.44
370 489 9.909644 ACACACGACATCTTTATATATTACTCC 57.090 33.333 0.00 0.00 0.00 3.85
379 498 5.785243 TGGTTGACACACGACATCTTTATA 58.215 37.500 0.00 0.00 34.74 0.98
384 503 2.613026 TTGGTTGACACACGACATCT 57.387 45.000 0.00 0.00 34.74 2.90
390 509 4.343811 TGTTTACTTTGGTTGACACACG 57.656 40.909 0.00 0.00 0.00 4.49
406 525 7.875554 TGTCTGCATGTTACATCTAGTTGTTTA 59.124 33.333 11.57 0.00 0.00 2.01
410 529 5.220284 CGTGTCTGCATGTTACATCTAGTTG 60.220 44.000 0.00 0.00 0.00 3.16
430 549 4.371855 TCATAATCTCGAGCTTTCGTGT 57.628 40.909 7.81 0.00 0.00 4.49
441 560 6.987386 ACTAGATGTCCCTTTCATAATCTCG 58.013 40.000 0.00 0.00 0.00 4.04
446 565 6.884472 TCCAACTAGATGTCCCTTTCATAA 57.116 37.500 0.00 0.00 0.00 1.90
449 568 5.250543 TCAATCCAACTAGATGTCCCTTTCA 59.749 40.000 0.00 0.00 0.00 2.69
452 571 5.429762 TGATCAATCCAACTAGATGTCCCTT 59.570 40.000 0.00 0.00 0.00 3.95
457 576 5.812642 GTCGTTGATCAATCCAACTAGATGT 59.187 40.000 12.12 0.00 41.11 3.06
459 578 5.977635 TGTCGTTGATCAATCCAACTAGAT 58.022 37.500 12.12 0.00 41.11 1.98
460 579 5.400066 TGTCGTTGATCAATCCAACTAGA 57.600 39.130 12.12 0.00 41.11 2.43
461 580 5.812127 TCATGTCGTTGATCAATCCAACTAG 59.188 40.000 12.12 5.31 41.11 2.57
462 581 5.729510 TCATGTCGTTGATCAATCCAACTA 58.270 37.500 12.12 0.00 41.11 2.24
473 592 6.017605 GCCAAAATCTAGATCATGTCGTTGAT 60.018 38.462 5.51 0.00 39.04 2.57
479 598 4.450419 CGGAGCCAAAATCTAGATCATGTC 59.550 45.833 5.51 0.00 0.00 3.06
502 621 1.442017 GTTTGTCGACATTGGCGCC 60.442 57.895 22.73 22.73 0.00 6.53
508 627 9.474920 AATTTTATCAACATGTTTGTCGACATT 57.525 25.926 20.80 6.54 38.15 2.71
540 662 3.084786 GCTGCTCAAAATAACTGACCCT 58.915 45.455 0.00 0.00 0.00 4.34
541 663 3.084786 AGCTGCTCAAAATAACTGACCC 58.915 45.455 0.00 0.00 0.00 4.46
542 664 4.773323 AAGCTGCTCAAAATAACTGACC 57.227 40.909 1.00 0.00 0.00 4.02
543 665 8.574196 TTTTTAAGCTGCTCAAAATAACTGAC 57.426 30.769 11.28 0.00 0.00 3.51
565 687 2.042979 TGGGGAGAGGCAGCTTATTTTT 59.957 45.455 0.00 0.00 0.00 1.94
566 688 1.640670 TGGGGAGAGGCAGCTTATTTT 59.359 47.619 0.00 0.00 0.00 1.82
567 689 1.213926 CTGGGGAGAGGCAGCTTATTT 59.786 52.381 0.00 0.00 0.00 1.40
568 690 0.842635 CTGGGGAGAGGCAGCTTATT 59.157 55.000 0.00 0.00 0.00 1.40
569 691 1.704007 GCTGGGGAGAGGCAGCTTAT 61.704 60.000 0.00 0.00 37.66 1.73
570 692 2.370445 GCTGGGGAGAGGCAGCTTA 61.370 63.158 0.00 0.00 37.66 3.09
571 693 3.726144 GCTGGGGAGAGGCAGCTT 61.726 66.667 0.00 0.00 37.66 3.74
572 694 4.737476 AGCTGGGGAGAGGCAGCT 62.737 66.667 0.00 0.00 45.07 4.24
573 695 1.915078 TTAAGCTGGGGAGAGGCAGC 61.915 60.000 0.00 0.00 40.66 5.25
574 696 0.620556 TTTAAGCTGGGGAGAGGCAG 59.379 55.000 0.00 0.00 0.00 4.85
575 697 1.072266 TTTTAAGCTGGGGAGAGGCA 58.928 50.000 0.00 0.00 0.00 4.75
576 698 2.215942 TTTTTAAGCTGGGGAGAGGC 57.784 50.000 0.00 0.00 0.00 4.70
593 715 8.546597 ACAAATTTAGAATGCGGCTTATTTTT 57.453 26.923 0.00 0.00 0.00 1.94
594 716 8.442384 CAACAAATTTAGAATGCGGCTTATTTT 58.558 29.630 0.00 0.00 0.00 1.82
595 717 7.816995 TCAACAAATTTAGAATGCGGCTTATTT 59.183 29.630 0.00 0.00 0.00 1.40
596 718 7.319646 TCAACAAATTTAGAATGCGGCTTATT 58.680 30.769 0.00 0.00 0.00 1.40
597 719 6.862209 TCAACAAATTTAGAATGCGGCTTAT 58.138 32.000 0.00 0.00 0.00 1.73
598 720 6.150307 TCTCAACAAATTTAGAATGCGGCTTA 59.850 34.615 0.00 0.00 0.00 3.09
599 721 5.048083 TCTCAACAAATTTAGAATGCGGCTT 60.048 36.000 0.00 0.00 0.00 4.35
600 722 4.458989 TCTCAACAAATTTAGAATGCGGCT 59.541 37.500 0.00 0.00 0.00 5.52
601 723 4.558860 GTCTCAACAAATTTAGAATGCGGC 59.441 41.667 0.00 0.00 0.00 6.53
602 724 5.942872 AGTCTCAACAAATTTAGAATGCGG 58.057 37.500 0.00 0.00 0.00 5.69
603 725 7.301054 AGAAGTCTCAACAAATTTAGAATGCG 58.699 34.615 0.00 0.00 0.00 4.73
604 726 9.548208 GTAGAAGTCTCAACAAATTTAGAATGC 57.452 33.333 0.00 0.00 0.00 3.56
607 729 9.607988 TGTGTAGAAGTCTCAACAAATTTAGAA 57.392 29.630 0.00 0.00 0.00 2.10
608 730 9.778741 ATGTGTAGAAGTCTCAACAAATTTAGA 57.221 29.630 0.00 0.00 0.00 2.10
612 734 9.561069 ACTAATGTGTAGAAGTCTCAACAAATT 57.439 29.630 5.41 5.41 34.82 1.82
613 735 9.561069 AACTAATGTGTAGAAGTCTCAACAAAT 57.439 29.630 1.43 0.00 0.00 2.32
614 736 8.958119 AACTAATGTGTAGAAGTCTCAACAAA 57.042 30.769 1.43 0.00 0.00 2.83
616 738 9.856488 GATAACTAATGTGTAGAAGTCTCAACA 57.144 33.333 0.08 0.08 0.00 3.33
619 741 9.462606 TGAGATAACTAATGTGTAGAAGTCTCA 57.537 33.333 0.00 0.00 0.00 3.27
641 763 8.251721 GCTAGGACTTCTAAACAAGTTATGAGA 58.748 37.037 0.00 0.00 36.71 3.27
642 764 7.221067 CGCTAGGACTTCTAAACAAGTTATGAG 59.779 40.741 0.00 0.00 36.71 2.90
643 765 7.033791 CGCTAGGACTTCTAAACAAGTTATGA 58.966 38.462 0.00 0.00 36.71 2.15
644 766 7.033791 TCGCTAGGACTTCTAAACAAGTTATG 58.966 38.462 0.00 0.00 36.71 1.90
645 767 7.166691 TCGCTAGGACTTCTAAACAAGTTAT 57.833 36.000 0.00 0.00 36.71 1.89
646 768 6.579666 TCGCTAGGACTTCTAAACAAGTTA 57.420 37.500 0.00 0.00 36.71 2.24
647 769 5.464030 TCGCTAGGACTTCTAAACAAGTT 57.536 39.130 0.00 0.00 36.71 2.66
648 770 5.464030 TTCGCTAGGACTTCTAAACAAGT 57.536 39.130 0.00 0.00 39.43 3.16
649 771 8.475331 TTTATTCGCTAGGACTTCTAAACAAG 57.525 34.615 0.00 0.00 0.00 3.16
650 772 8.836268 TTTTATTCGCTAGGACTTCTAAACAA 57.164 30.769 0.00 0.00 0.00 2.83
651 773 8.308931 TCTTTTATTCGCTAGGACTTCTAAACA 58.691 33.333 0.00 0.00 0.00 2.83
652 774 8.593842 GTCTTTTATTCGCTAGGACTTCTAAAC 58.406 37.037 0.00 0.00 0.00 2.01
653 775 8.308931 TGTCTTTTATTCGCTAGGACTTCTAAA 58.691 33.333 0.00 0.00 0.00 1.85
654 776 7.758528 GTGTCTTTTATTCGCTAGGACTTCTAA 59.241 37.037 0.00 0.00 0.00 2.10
655 777 7.094075 TGTGTCTTTTATTCGCTAGGACTTCTA 60.094 37.037 0.00 0.00 0.00 2.10
656 778 6.100668 GTGTCTTTTATTCGCTAGGACTTCT 58.899 40.000 0.00 0.00 0.00 2.85
657 779 5.867716 TGTGTCTTTTATTCGCTAGGACTTC 59.132 40.000 0.00 0.00 0.00 3.01
658 780 5.790593 TGTGTCTTTTATTCGCTAGGACTT 58.209 37.500 0.00 0.00 0.00 3.01
659 781 5.401531 TGTGTCTTTTATTCGCTAGGACT 57.598 39.130 0.00 0.00 0.00 3.85
660 782 4.033014 GCTGTGTCTTTTATTCGCTAGGAC 59.967 45.833 0.00 0.00 0.00 3.85
661 783 4.081642 AGCTGTGTCTTTTATTCGCTAGGA 60.082 41.667 0.00 0.00 0.00 2.94
662 784 4.184629 AGCTGTGTCTTTTATTCGCTAGG 58.815 43.478 0.00 0.00 0.00 3.02
663 785 5.786401 AAGCTGTGTCTTTTATTCGCTAG 57.214 39.130 0.00 0.00 0.00 3.42
664 786 6.160684 TGTAAGCTGTGTCTTTTATTCGCTA 58.839 36.000 0.00 0.00 0.00 4.26
665 787 4.994852 TGTAAGCTGTGTCTTTTATTCGCT 59.005 37.500 0.00 0.00 0.00 4.93
666 788 5.277601 TGTAAGCTGTGTCTTTTATTCGC 57.722 39.130 0.00 0.00 0.00 4.70
667 789 5.637810 TCCTGTAAGCTGTGTCTTTTATTCG 59.362 40.000 0.00 0.00 0.00 3.34
668 790 7.435068 TTCCTGTAAGCTGTGTCTTTTATTC 57.565 36.000 0.00 0.00 0.00 1.75
669 791 7.817418 TTTCCTGTAAGCTGTGTCTTTTATT 57.183 32.000 0.00 0.00 0.00 1.40
670 792 7.817418 TTTTCCTGTAAGCTGTGTCTTTTAT 57.183 32.000 0.00 0.00 0.00 1.40
671 793 7.633193 TTTTTCCTGTAAGCTGTGTCTTTTA 57.367 32.000 0.00 0.00 0.00 1.52
672 794 6.524101 TTTTTCCTGTAAGCTGTGTCTTTT 57.476 33.333 0.00 0.00 0.00 2.27
692 814 1.182667 GCCGCCTTCTACCCATTTTT 58.817 50.000 0.00 0.00 0.00 1.94
693 815 0.331616 AGCCGCCTTCTACCCATTTT 59.668 50.000 0.00 0.00 0.00 1.82
694 816 0.331616 AAGCCGCCTTCTACCCATTT 59.668 50.000 0.00 0.00 0.00 2.32
695 817 1.209621 TAAGCCGCCTTCTACCCATT 58.790 50.000 0.00 0.00 32.47 3.16
696 818 1.435256 ATAAGCCGCCTTCTACCCAT 58.565 50.000 0.00 0.00 32.47 4.00
697 819 1.209621 AATAAGCCGCCTTCTACCCA 58.790 50.000 0.00 0.00 32.47 4.51
698 820 2.343484 AAATAAGCCGCCTTCTACCC 57.657 50.000 0.00 0.00 32.47 3.69
716 838 5.530543 CCCAATTCTTTTGGCAGCTTAAAAA 59.469 36.000 8.69 5.67 38.23 1.94
717 839 5.062528 CCCAATTCTTTTGGCAGCTTAAAA 58.937 37.500 0.00 0.33 38.23 1.52
718 840 4.640364 CCCAATTCTTTTGGCAGCTTAAA 58.360 39.130 0.00 0.00 38.23 1.52
719 841 3.556843 GCCCAATTCTTTTGGCAGCTTAA 60.557 43.478 0.00 0.00 42.02 1.85
720 842 2.028203 GCCCAATTCTTTTGGCAGCTTA 60.028 45.455 0.00 0.00 42.02 3.09
721 843 1.271001 GCCCAATTCTTTTGGCAGCTT 60.271 47.619 0.00 0.00 42.02 3.74
722 844 0.322648 GCCCAATTCTTTTGGCAGCT 59.677 50.000 0.00 0.00 42.02 4.24
723 845 0.674581 GGCCCAATTCTTTTGGCAGC 60.675 55.000 0.00 0.00 43.76 5.25
724 846 0.978907 AGGCCCAATTCTTTTGGCAG 59.021 50.000 0.00 0.00 43.76 4.85
725 847 2.317371 TAGGCCCAATTCTTTTGGCA 57.683 45.000 0.00 0.00 43.76 4.92
726 848 2.567169 ACTTAGGCCCAATTCTTTTGGC 59.433 45.455 0.00 0.00 41.77 4.52
727 849 4.890158 AACTTAGGCCCAATTCTTTTGG 57.110 40.909 0.00 0.00 39.25 3.28
728 850 5.621329 CGGTAACTTAGGCCCAATTCTTTTG 60.621 44.000 0.00 0.00 0.00 2.44
729 851 4.461431 CGGTAACTTAGGCCCAATTCTTTT 59.539 41.667 0.00 0.00 0.00 2.27
730 852 4.014406 CGGTAACTTAGGCCCAATTCTTT 58.986 43.478 0.00 0.00 0.00 2.52
731 853 3.264964 TCGGTAACTTAGGCCCAATTCTT 59.735 43.478 0.00 0.00 0.00 2.52
732 854 2.841881 TCGGTAACTTAGGCCCAATTCT 59.158 45.455 0.00 0.00 0.00 2.40
733 855 3.271055 TCGGTAACTTAGGCCCAATTC 57.729 47.619 0.00 0.00 0.00 2.17
734 856 3.264964 TCTTCGGTAACTTAGGCCCAATT 59.735 43.478 0.00 0.00 0.00 2.32
735 857 2.841881 TCTTCGGTAACTTAGGCCCAAT 59.158 45.455 0.00 0.00 0.00 3.16
736 858 2.259012 TCTTCGGTAACTTAGGCCCAA 58.741 47.619 0.00 0.00 0.00 4.12
737 859 1.941377 TCTTCGGTAACTTAGGCCCA 58.059 50.000 0.00 0.00 0.00 5.36
738 860 2.498885 TCTTCTTCGGTAACTTAGGCCC 59.501 50.000 0.00 0.00 0.00 5.80
739 861 3.430513 CCTCTTCTTCGGTAACTTAGGCC 60.431 52.174 0.00 0.00 0.00 5.19
740 862 3.195182 ACCTCTTCTTCGGTAACTTAGGC 59.805 47.826 0.00 0.00 0.00 3.93
741 863 4.438472 CGACCTCTTCTTCGGTAACTTAGG 60.438 50.000 0.00 0.00 32.62 2.69
742 864 4.394300 TCGACCTCTTCTTCGGTAACTTAG 59.606 45.833 0.00 0.00 35.89 2.18
743 865 4.326826 TCGACCTCTTCTTCGGTAACTTA 58.673 43.478 0.00 0.00 35.89 2.24
744 866 3.152341 TCGACCTCTTCTTCGGTAACTT 58.848 45.455 0.00 0.00 35.89 2.66
745 867 2.787994 TCGACCTCTTCTTCGGTAACT 58.212 47.619 0.00 0.00 35.89 2.24
746 868 3.436496 CATCGACCTCTTCTTCGGTAAC 58.564 50.000 0.00 0.00 35.89 2.50
747 869 2.426024 CCATCGACCTCTTCTTCGGTAA 59.574 50.000 0.00 0.00 35.89 2.85
748 870 2.022195 CCATCGACCTCTTCTTCGGTA 58.978 52.381 0.00 0.00 35.89 4.02
767 889 5.920273 TGAATTTCGAATTTGAACTTGCTCC 59.080 36.000 14.02 3.01 0.00 4.70
785 907 9.985730 TTGCTTCTGACTTCAAAATATGAATTT 57.014 25.926 0.00 0.00 46.62 1.82
853 988 2.838693 GAGACCCGGTAGGAGGCC 60.839 72.222 0.00 0.00 41.02 5.19
858 993 1.677942 GTAGAGTGAGACCCGGTAGG 58.322 60.000 0.00 0.00 43.78 3.18
863 998 1.668101 GGCAGGTAGAGTGAGACCCG 61.668 65.000 0.00 0.00 36.27 5.28
876 1011 1.089123 TTTAGGGGAAATGGGCAGGT 58.911 50.000 0.00 0.00 0.00 4.00
877 1012 2.246091 TTTTAGGGGAAATGGGCAGG 57.754 50.000 0.00 0.00 0.00 4.85
894 1029 4.328536 GGGAAATGGGCGGTTTTATTTTT 58.671 39.130 0.00 0.00 0.00 1.94
895 1030 3.617775 CGGGAAATGGGCGGTTTTATTTT 60.618 43.478 0.00 0.00 0.00 1.82
896 1031 2.093921 CGGGAAATGGGCGGTTTTATTT 60.094 45.455 0.00 0.00 0.00 1.40
897 1032 1.478916 CGGGAAATGGGCGGTTTTATT 59.521 47.619 0.00 0.00 0.00 1.40
898 1033 1.107945 CGGGAAATGGGCGGTTTTAT 58.892 50.000 0.00 0.00 0.00 1.40
899 1034 1.596895 GCGGGAAATGGGCGGTTTTA 61.597 55.000 0.00 0.00 0.00 1.52
900 1035 2.938086 GCGGGAAATGGGCGGTTTT 61.938 57.895 0.00 0.00 0.00 2.43
901 1036 3.378602 GCGGGAAATGGGCGGTTT 61.379 61.111 0.00 0.00 0.00 3.27
932 1067 4.978099 AGAAGAAGCTTCTGGAATGTGAA 58.022 39.130 29.09 0.00 37.65 3.18
933 1068 4.285517 AGAGAAGAAGCTTCTGGAATGTGA 59.714 41.667 29.09 0.00 37.65 3.58
993 1128 3.081409 CGGGTCCCCATCCTCGTT 61.081 66.667 1.00 0.00 35.37 3.85
1206 1359 1.267121 TATTAGATGCGGAGGGCCTC 58.733 55.000 25.80 25.80 42.61 4.70
1230 1390 1.992277 CAGGAGGTGAGGGTGAGGG 60.992 68.421 0.00 0.00 0.00 4.30
1231 1391 2.664081 GCAGGAGGTGAGGGTGAGG 61.664 68.421 0.00 0.00 0.00 3.86
1232 1392 2.985456 GCAGGAGGTGAGGGTGAG 59.015 66.667 0.00 0.00 0.00 3.51
1233 1393 2.997315 CGCAGGAGGTGAGGGTGA 60.997 66.667 0.00 0.00 0.00 4.02
1234 1394 3.302347 GACGCAGGAGGTGAGGGTG 62.302 68.421 0.00 0.00 0.00 4.61
1235 1395 2.997897 GACGCAGGAGGTGAGGGT 60.998 66.667 0.00 0.00 0.00 4.34
1302 1473 2.203126 CCAGATCGGAAGCCTGGC 60.203 66.667 11.65 11.65 41.91 4.85
1303 1474 2.203126 GCCAGATCGGAAGCCTGG 60.203 66.667 15.71 15.71 46.95 4.45
1448 1647 1.803289 GGGAAGAAATCGCCACTGC 59.197 57.895 0.00 0.00 35.03 4.40
1468 1705 1.700186 TGGCCAATTTTACCCCCAAAC 59.300 47.619 0.61 0.00 0.00 2.93
1528 1765 7.827236 TCTCTGAAGTTCACAAAAAGAAAGGTA 59.173 33.333 0.08 0.00 0.00 3.08
1529 1766 6.659242 TCTCTGAAGTTCACAAAAAGAAAGGT 59.341 34.615 0.08 0.00 0.00 3.50
1534 1771 6.095300 TGCAATCTCTGAAGTTCACAAAAAGA 59.905 34.615 0.08 1.19 0.00 2.52
1539 1776 5.221106 CCTTTGCAATCTCTGAAGTTCACAA 60.221 40.000 0.00 0.14 0.00 3.33
1754 1999 1.553690 TAGAACCAGACAGGCCAGGC 61.554 60.000 5.01 1.26 43.14 4.85
1755 2000 0.984230 TTAGAACCAGACAGGCCAGG 59.016 55.000 5.01 0.00 43.14 4.45
1757 2002 2.561478 GTTTAGAACCAGACAGGCCA 57.439 50.000 5.01 0.00 43.14 5.36
1899 2151 4.080919 CCATGATCAAGAAGGTACCTGACA 60.081 45.833 17.14 10.20 0.00 3.58
1978 2230 8.511604 AAGATCCTTGTGTTTATACCATGAAG 57.488 34.615 0.00 0.00 0.00 3.02
1979 2231 7.556275 GGAAGATCCTTGTGTTTATACCATGAA 59.444 37.037 0.00 0.00 32.53 2.57
2029 2796 2.040278 TGAAGCCAAGGCATAGTCTTGT 59.960 45.455 14.40 0.00 42.90 3.16
2070 2842 0.746659 AGGTCCAGCACAAAACAAGC 59.253 50.000 0.00 0.00 0.00 4.01
2138 2910 4.848357 AGGTTCTCCAACATAACATCTGG 58.152 43.478 0.00 0.00 33.70 3.86
2398 3625 8.813951 ACTATAAGGATAAATAGTACAGTGCCC 58.186 37.037 0.00 0.00 37.19 5.36
2427 3654 4.410099 AGATATCCTGAGAGAAGCTCCAG 58.590 47.826 0.00 0.00 43.26 3.86
2482 3715 3.092301 AGGCATTTCTTGGGAAACTAGC 58.908 45.455 0.00 0.00 43.16 3.42
2509 3821 6.073222 CCGGGAAACTTGCATATCATACTAAC 60.073 42.308 0.00 0.00 0.00 2.34
2596 3908 6.493458 GGGTTGCCATAAACAGATACCATAAT 59.507 38.462 0.00 0.00 0.00 1.28
2620 3933 1.339438 CCTGACAGACACATGGAAGGG 60.339 57.143 3.32 0.00 0.00 3.95
2655 3974 4.993028 ACTATTGGTGGGAAGCAACTTTA 58.007 39.130 0.00 0.00 0.00 1.85
2835 4155 3.304928 CCTTTCTGAACAGCAAAAGCGAT 60.305 43.478 9.18 0.00 0.00 4.58
2848 4168 2.156917 CAGCAGCATGTCCTTTCTGAA 58.843 47.619 0.00 0.00 39.31 3.02
2865 4185 4.858935 TGCAAAAGTATCTTCACAACAGC 58.141 39.130 0.00 0.00 0.00 4.40
2990 4320 6.272318 CAACGAATAATGGCCACAAATACAT 58.728 36.000 8.16 0.00 0.00 2.29
2999 4329 2.088423 GTCACCAACGAATAATGGCCA 58.912 47.619 8.56 8.56 40.51 5.36
3148 4478 1.014352 CCATACTACGCCAAGCCAAC 58.986 55.000 0.00 0.00 0.00 3.77
3257 4643 1.075525 ACCGGTCCTAGCATGCCTA 60.076 57.895 15.66 5.40 0.00 3.93
3386 4772 8.729805 ATATGACAGTTCCAAGAGAAAGATTC 57.270 34.615 0.00 0.00 35.85 2.52
3630 5030 6.769822 CCCTATCAGATGCAAGTATGAAAAGT 59.230 38.462 0.00 0.00 0.00 2.66
3832 5269 7.818493 ATAACTCGTATAGCTGTTGCATATG 57.182 36.000 0.00 0.00 42.74 1.78
3882 5322 9.408648 AGCACAGCCTTTTATTTGTATATTACT 57.591 29.630 0.00 0.00 0.00 2.24
3891 5331 5.119125 GCAACTTAGCACAGCCTTTTATTTG 59.881 40.000 0.00 0.00 0.00 2.32
3914 5354 2.678336 AGCACGCTTATGTAAGAAAGGC 59.322 45.455 4.03 2.14 35.33 4.35
4001 9534 6.036083 GTCGTTGCATATCAGTGTAAGACAAT 59.964 38.462 0.00 0.00 30.45 2.71
4057 9590 5.991933 ACTACAGATAGCATCATGTAGGG 57.008 43.478 21.71 11.52 40.84 3.53
4113 9649 7.067615 TGGTGAAACTGTAACAAGCTTATTCAA 59.932 33.333 0.00 0.00 36.74 2.69
4400 9940 7.885297 AGTGTGAAAGAAAATTTGCTAGCATA 58.115 30.769 20.13 14.95 0.00 3.14
4550 10095 4.065088 CAGATGAGTTTTCAGGAACGGAA 58.935 43.478 0.00 0.00 41.47 4.30
4642 10187 8.301002 TGAAGTAAGAGAGCTTTCTAAGAAGAC 58.699 37.037 7.28 0.23 32.30 3.01
4644 10189 9.651913 AATGAAGTAAGAGAGCTTTCTAAGAAG 57.348 33.333 7.28 0.00 32.30 2.85
4816 13705 5.341793 ATCCTAAGGAACAGGACTAGCCTAA 60.342 44.000 5.53 0.00 44.89 2.69
4829 13718 4.401837 ACTCGGTAGTGAATCCTAAGGAAC 59.598 45.833 0.00 0.00 32.17 3.62
4841 13730 2.718563 TGTAGCATGACTCGGTAGTGA 58.281 47.619 0.00 0.00 35.56 3.41
4874 13763 3.946558 AGAGCTGGTCTAACTAACTACCG 59.053 47.826 7.75 0.00 34.60 4.02
4901 13790 3.587797 ACACTACATGTCCCGTTACAG 57.412 47.619 0.00 0.00 36.54 2.74
4927 13816 6.536582 AGCTAACTTGTATATTCAGTGTGCAG 59.463 38.462 0.00 0.00 0.00 4.41
4986 13875 6.939163 AGAAACAGTGCTCTAGAAATGACATT 59.061 34.615 0.00 0.00 0.00 2.71
4988 13877 5.858381 AGAAACAGTGCTCTAGAAATGACA 58.142 37.500 0.00 0.00 0.00 3.58
5042 13931 6.806739 GCAAACATAATAACTTGGTCAGGAAC 59.193 38.462 0.00 0.00 0.00 3.62
5043 13932 6.071616 GGCAAACATAATAACTTGGTCAGGAA 60.072 38.462 0.00 0.00 0.00 3.36
5044 13933 5.417580 GGCAAACATAATAACTTGGTCAGGA 59.582 40.000 0.00 0.00 0.00 3.86
5097 13990 2.483013 CCTTGTCGTTTCAGGTCAGACA 60.483 50.000 2.17 0.00 39.68 3.41
5119 14012 3.686726 CCTGCTTCTTAAATGCTTCGTCT 59.313 43.478 0.00 0.00 0.00 4.18
5122 14015 4.889832 ATCCTGCTTCTTAAATGCTTCG 57.110 40.909 0.00 0.00 0.00 3.79
5182 14480 3.149005 ACACAGAAATAAAAGGCCCGA 57.851 42.857 0.00 0.00 0.00 5.14
5228 14526 2.586648 ACTGGAGGAACATGTTTCCC 57.413 50.000 21.39 17.87 39.39 3.97
5229 14527 4.553330 TCTACTGGAGGAACATGTTTCC 57.447 45.455 18.66 18.66 38.86 3.13
5280 14579 8.207545 TGTTAATTTTTAGACATTGCCAAGGTT 58.792 29.630 0.00 0.00 0.00 3.50
5307 14607 6.929049 CAGGTTAGCATTATGATCGAGGTAAA 59.071 38.462 0.00 0.00 0.00 2.01
5319 14619 6.067217 AGTCTTCCAACAGGTTAGCATTAT 57.933 37.500 0.00 0.00 0.00 1.28
5336 14649 4.938832 TGCTCTCACTAGTGACTAGTCTTC 59.061 45.833 21.61 15.53 44.37 2.87
5776 15300 4.980590 TCCATAAACATAAAAGCTGTGCG 58.019 39.130 0.00 0.00 0.00 5.34
5779 15303 5.105756 GCACCTCCATAAACATAAAAGCTGT 60.106 40.000 0.00 0.00 0.00 4.40
5982 15603 3.063452 GCACTCAACGAAACACAAGAAGA 59.937 43.478 0.00 0.00 0.00 2.87
5998 16651 4.623932 ACTGAATTCTACCAAGCACTCA 57.376 40.909 7.05 0.00 0.00 3.41
6029 16683 5.180367 TCTCTTATCAGCTGATCAGAACG 57.820 43.478 30.73 23.18 35.21 3.95
6030 16684 9.539825 TTTTATCTCTTATCAGCTGATCAGAAC 57.460 33.333 30.73 9.56 35.21 3.01
6057 16979 3.991773 TCAAGAAAATACAACGAGACGGG 59.008 43.478 0.00 0.00 0.00 5.28
6243 17165 3.700038 TCCGAGAGAACAGGTAAAGATCC 59.300 47.826 0.00 0.00 0.00 3.36
6273 17195 5.105351 GGCCACCATAATTCAAAGTTAAGCT 60.105 40.000 0.00 0.00 0.00 3.74
6439 17361 6.885922 ACCAAACACTTCACTCTAACTTAGT 58.114 36.000 0.00 0.00 0.00 2.24
6461 17383 4.782019 TGCAATACCACAATCTTCAACC 57.218 40.909 0.00 0.00 0.00 3.77
6462 17384 6.401367 GCAAATGCAATACCACAATCTTCAAC 60.401 38.462 0.00 0.00 41.59 3.18
6463 17385 5.638657 GCAAATGCAATACCACAATCTTCAA 59.361 36.000 0.00 0.00 41.59 2.69
6464 17386 5.170021 GCAAATGCAATACCACAATCTTCA 58.830 37.500 0.00 0.00 41.59 3.02
6465 17387 4.567959 GGCAAATGCAATACCACAATCTTC 59.432 41.667 7.80 0.00 44.36 2.87
6466 17388 4.020396 TGGCAAATGCAATACCACAATCTT 60.020 37.500 7.80 0.00 44.36 2.40
6467 17389 3.514706 TGGCAAATGCAATACCACAATCT 59.485 39.130 7.80 0.00 44.36 2.40
6468 17390 3.859443 TGGCAAATGCAATACCACAATC 58.141 40.909 7.80 0.00 44.36 2.67
6469 17391 3.261390 ACTGGCAAATGCAATACCACAAT 59.739 39.130 7.80 0.00 44.36 2.71
6470 17392 2.632028 ACTGGCAAATGCAATACCACAA 59.368 40.909 7.80 0.00 44.36 3.33
6471 17393 2.246469 ACTGGCAAATGCAATACCACA 58.754 42.857 7.80 0.00 44.36 4.17
6472 17394 3.253230 GAACTGGCAAATGCAATACCAC 58.747 45.455 7.80 0.00 44.36 4.16
6473 17395 2.233431 GGAACTGGCAAATGCAATACCA 59.767 45.455 7.80 0.00 44.36 3.25
6474 17396 2.418609 GGGAACTGGCAAATGCAATACC 60.419 50.000 7.80 3.96 44.36 2.73
6475 17397 2.233431 TGGGAACTGGCAAATGCAATAC 59.767 45.455 7.80 0.00 44.36 1.89
6476 17398 2.533916 TGGGAACTGGCAAATGCAATA 58.466 42.857 7.80 0.00 44.36 1.90
6477 17399 1.350071 TGGGAACTGGCAAATGCAAT 58.650 45.000 7.80 0.00 44.36 3.56
6478 17400 1.350071 ATGGGAACTGGCAAATGCAA 58.650 45.000 7.80 0.00 44.36 4.08
6479 17401 2.228545 TATGGGAACTGGCAAATGCA 57.771 45.000 7.80 0.00 44.36 3.96
6480 17402 3.825143 AATATGGGAACTGGCAAATGC 57.175 42.857 0.00 0.00 41.14 3.56
6481 17403 4.333372 GCAAAATATGGGAACTGGCAAATG 59.667 41.667 0.00 0.00 0.00 2.32
6482 17404 4.019501 TGCAAAATATGGGAACTGGCAAAT 60.020 37.500 0.00 0.00 0.00 2.32
6483 17405 3.326006 TGCAAAATATGGGAACTGGCAAA 59.674 39.130 0.00 0.00 0.00 3.68
6484 17406 2.902486 TGCAAAATATGGGAACTGGCAA 59.098 40.909 0.00 0.00 0.00 4.52
6485 17407 2.233431 GTGCAAAATATGGGAACTGGCA 59.767 45.455 0.00 0.00 0.00 4.92
6486 17408 2.497273 AGTGCAAAATATGGGAACTGGC 59.503 45.455 0.00 0.00 0.00 4.85
6487 17409 3.511146 ACAGTGCAAAATATGGGAACTGG 59.489 43.478 12.05 0.00 38.25 4.00
6488 17410 4.380867 GGACAGTGCAAAATATGGGAACTG 60.381 45.833 7.70 7.70 39.49 3.16
6489 17411 3.763897 GGACAGTGCAAAATATGGGAACT 59.236 43.478 0.00 0.00 0.00 3.01
6490 17412 3.509575 TGGACAGTGCAAAATATGGGAAC 59.490 43.478 0.00 0.00 0.00 3.62
6491 17413 3.772387 TGGACAGTGCAAAATATGGGAA 58.228 40.909 0.00 0.00 0.00 3.97
6492 17414 3.448093 TGGACAGTGCAAAATATGGGA 57.552 42.857 0.00 0.00 0.00 4.37
6493 17415 4.403432 AGATTGGACAGTGCAAAATATGGG 59.597 41.667 11.97 0.00 29.75 4.00
6494 17416 5.359009 AGAGATTGGACAGTGCAAAATATGG 59.641 40.000 11.97 0.00 29.75 2.74
6495 17417 6.127814 ACAGAGATTGGACAGTGCAAAATATG 60.128 38.462 11.97 12.41 29.75 1.78
6496 17418 5.948162 ACAGAGATTGGACAGTGCAAAATAT 59.052 36.000 11.97 0.00 29.75 1.28
6497 17419 5.316167 ACAGAGATTGGACAGTGCAAAATA 58.684 37.500 11.97 0.00 29.75 1.40
6498 17420 4.147321 ACAGAGATTGGACAGTGCAAAAT 58.853 39.130 11.97 3.23 29.75 1.82
6499 17421 3.554934 ACAGAGATTGGACAGTGCAAAA 58.445 40.909 11.97 0.00 29.75 2.44
6500 17422 3.213206 ACAGAGATTGGACAGTGCAAA 57.787 42.857 11.97 0.00 29.75 3.68
6501 17423 2.936919 ACAGAGATTGGACAGTGCAA 57.063 45.000 10.25 10.25 30.73 4.08
6502 17424 2.028112 GGTACAGAGATTGGACAGTGCA 60.028 50.000 0.00 0.00 42.92 4.57
6503 17425 2.622436 GGTACAGAGATTGGACAGTGC 58.378 52.381 0.00 0.00 42.92 4.40
6504 17426 2.834549 AGGGTACAGAGATTGGACAGTG 59.165 50.000 0.00 0.00 42.92 3.66
6505 17427 3.191888 AGGGTACAGAGATTGGACAGT 57.808 47.619 0.00 0.00 42.92 3.55
6506 17428 4.098654 CAGTAGGGTACAGAGATTGGACAG 59.901 50.000 0.00 0.00 42.92 3.51
6507 17429 4.023980 CAGTAGGGTACAGAGATTGGACA 58.976 47.826 0.00 0.00 42.92 4.02
6508 17430 4.279145 TCAGTAGGGTACAGAGATTGGAC 58.721 47.826 0.00 0.00 40.16 4.02
6509 17431 4.537751 CTCAGTAGGGTACAGAGATTGGA 58.462 47.826 0.00 0.00 42.78 3.53
6510 17432 3.068873 GCTCAGTAGGGTACAGAGATTGG 59.931 52.174 9.88 0.00 42.78 3.16
6511 17433 3.701542 TGCTCAGTAGGGTACAGAGATTG 59.298 47.826 9.88 0.00 42.78 2.67
6512 17434 3.982516 TGCTCAGTAGGGTACAGAGATT 58.017 45.455 9.88 0.00 42.78 2.40
6513 17435 3.671740 TGCTCAGTAGGGTACAGAGAT 57.328 47.619 9.88 0.00 42.78 2.75
6514 17436 3.291584 CATGCTCAGTAGGGTACAGAGA 58.708 50.000 9.88 0.00 42.78 3.10
6515 17437 3.027412 ACATGCTCAGTAGGGTACAGAG 58.973 50.000 0.00 2.92 42.95 3.35
6516 17438 3.101643 ACATGCTCAGTAGGGTACAGA 57.898 47.619 0.00 0.00 0.00 3.41
6517 17439 5.109903 GTTTACATGCTCAGTAGGGTACAG 58.890 45.833 0.00 0.00 0.00 2.74
6518 17440 4.081309 GGTTTACATGCTCAGTAGGGTACA 60.081 45.833 0.00 0.00 0.00 2.90
6519 17441 4.439968 GGTTTACATGCTCAGTAGGGTAC 58.560 47.826 0.00 0.00 0.00 3.34
6520 17442 3.453353 GGGTTTACATGCTCAGTAGGGTA 59.547 47.826 0.00 0.00 0.00 3.69
6521 17443 2.238898 GGGTTTACATGCTCAGTAGGGT 59.761 50.000 0.00 0.00 0.00 4.34
6522 17444 2.505819 AGGGTTTACATGCTCAGTAGGG 59.494 50.000 0.00 0.00 0.00 3.53
6523 17445 3.914426 AGGGTTTACATGCTCAGTAGG 57.086 47.619 0.00 0.00 0.00 3.18
6524 17446 5.599999 ACTAGGGTTTACATGCTCAGTAG 57.400 43.478 0.00 0.00 0.00 2.57
6525 17447 7.670605 AATACTAGGGTTTACATGCTCAGTA 57.329 36.000 0.00 0.00 0.00 2.74
6526 17448 6.561519 AATACTAGGGTTTACATGCTCAGT 57.438 37.500 0.00 0.00 0.00 3.41
6527 17449 7.865706 AAAATACTAGGGTTTACATGCTCAG 57.134 36.000 0.00 0.00 0.00 3.35
6555 17477 7.473735 TCATGGAAACTGGCAAATACAAATA 57.526 32.000 0.00 0.00 0.00 1.40
6703 17626 3.076916 GGAAAGCCACCCCCATGC 61.077 66.667 0.00 0.00 0.00 4.06
6820 17750 3.426787 TCAGGGCGATAAGGAAAAACA 57.573 42.857 0.00 0.00 0.00 2.83
6826 17766 5.248248 TCAAATATCATCAGGGCGATAAGGA 59.752 40.000 0.00 0.00 31.20 3.36
6830 17770 5.189539 TCCATCAAATATCATCAGGGCGATA 59.810 40.000 0.00 0.00 31.20 2.92
6920 18139 7.421382 GGGAGGAAAGGAATAAGAACCATGATA 60.421 40.741 0.00 0.00 0.00 2.15
6995 20266 0.593128 CCCAACAAAGAGAACAGGCG 59.407 55.000 0.00 0.00 0.00 5.52
7097 20445 5.841957 AACTTAGAAACATCCATCCATGC 57.158 39.130 0.00 0.00 0.00 4.06
7104 20452 6.061441 TGCAGAAGAAACTTAGAAACATCCA 58.939 36.000 0.00 0.00 0.00 3.41
7161 20509 9.770097 TGGAAGAATTAGTATCATCAACAGATC 57.230 33.333 0.00 0.00 0.00 2.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.