Multiple sequence alignment - TraesCS1D01G047300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G047300 chr1D 100.000 5596 0 0 1 5596 27580570 27574975 0.000000e+00 10334.0
1 TraesCS1D01G047300 chr1D 97.689 1125 24 2 3987 5110 27540632 27539509 0.000000e+00 1932.0
2 TraesCS1D01G047300 chr1D 97.170 954 25 1 2142 3095 27546864 27545913 0.000000e+00 1611.0
3 TraesCS1D01G047300 chr1D 98.422 887 9 4 3087 3972 27541498 27540616 0.000000e+00 1555.0
4 TraesCS1D01G047300 chr1D 90.630 1142 48 26 613 1712 27556468 27555344 0.000000e+00 1461.0
5 TraesCS1D01G047300 chr1D 96.509 487 15 2 5111 5596 214343413 214343898 0.000000e+00 804.0
6 TraesCS1D01G047300 chr1D 96.516 488 14 2 5111 5596 405095776 405096262 0.000000e+00 804.0
7 TraesCS1D01G047300 chr1D 89.535 602 54 5 1 598 27557045 27556449 0.000000e+00 754.0
8 TraesCS1D01G047300 chr1D 97.866 328 6 1 1821 2147 27549106 27548779 2.930000e-157 566.0
9 TraesCS1D01G047300 chr1D 94.340 106 6 0 1720 1825 27553802 27553697 4.490000e-36 163.0
10 TraesCS1D01G047300 chr1A 88.908 4562 275 96 674 5110 28364996 28360541 0.000000e+00 5408.0
11 TraesCS1D01G047300 chr1A 84.457 1068 118 15 3987 5032 28379859 28378818 0.000000e+00 1009.0
12 TraesCS1D01G047300 chr1A 82.407 1097 107 35 3790 4862 28605576 28604542 0.000000e+00 878.0
13 TraesCS1D01G047300 chr1A 83.595 829 88 13 4226 5032 28406668 28405866 0.000000e+00 734.0
14 TraesCS1D01G047300 chr1A 88.276 290 27 2 316 598 28365296 28365007 1.930000e-89 340.0
15 TraesCS1D01G047300 chr1B 93.514 1773 82 18 2196 3944 43045473 43043710 0.000000e+00 2606.0
16 TraesCS1D01G047300 chr1B 95.264 929 42 1 3992 4920 43043705 43042779 0.000000e+00 1471.0
17 TraesCS1D01G047300 chr1B 88.959 1114 61 35 1059 2154 43047695 43046626 0.000000e+00 1319.0
18 TraesCS1D01G047300 chr1B 90.476 924 59 18 1 907 43048836 43047925 0.000000e+00 1192.0
19 TraesCS1D01G047300 chr1B 82.216 1074 135 22 3987 5038 43215665 43214626 0.000000e+00 874.0
20 TraesCS1D01G047300 chr1B 90.769 195 17 1 4917 5110 42985853 42985659 5.560000e-65 259.0
21 TraesCS1D01G047300 chr1B 95.312 64 3 0 340 403 43053348 43053285 9.920000e-18 102.0
22 TraesCS1D01G047300 chr5D 85.255 1743 193 33 2118 3810 221478012 221476284 0.000000e+00 1736.0
23 TraesCS1D01G047300 chr5D 88.694 513 51 6 3987 4497 221476163 221475656 2.210000e-173 619.0
24 TraesCS1D01G047300 chr5D 79.099 866 76 50 1099 1901 221480188 221479365 3.010000e-137 499.0
25 TraesCS1D01G047300 chr5D 83.251 203 30 3 1920 2122 221478775 221478577 3.440000e-42 183.0
26 TraesCS1D01G047300 chr5A 84.880 1746 189 43 2118 3810 302554478 302556201 0.000000e+00 1692.0
27 TraesCS1D01G047300 chr5A 89.279 513 48 6 3987 4497 302556322 302556829 2.200000e-178 636.0
28 TraesCS1D01G047300 chr5A 80.592 845 69 48 1128 1901 302552176 302552996 1.050000e-156 564.0
29 TraesCS1D01G047300 chr5A 85.222 203 26 3 1920 2122 302553607 302553805 7.350000e-49 206.0
30 TraesCS1D01G047300 chr5B 84.546 1663 189 44 2118 3727 244008497 244006850 0.000000e+00 1585.0
31 TraesCS1D01G047300 chr5B 88.975 517 46 10 3990 4500 244006548 244006037 3.680000e-176 628.0
32 TraesCS1D01G047300 chr5B 79.560 910 78 49 1073 1901 244011031 244010149 8.190000e-153 551.0
33 TraesCS1D01G047300 chr6D 96.708 486 16 0 5111 5596 431361218 431360733 0.000000e+00 809.0
34 TraesCS1D01G047300 chr4D 96.715 487 15 1 5111 5596 421273814 421273328 0.000000e+00 809.0
35 TraesCS1D01G047300 chr4D 96.701 485 15 1 5113 5596 484413090 484413574 0.000000e+00 806.0
36 TraesCS1D01G047300 chr4D 96.509 487 16 1 5111 5596 84171416 84170930 0.000000e+00 804.0
37 TraesCS1D01G047300 chr2D 96.715 487 15 1 5111 5596 551909406 551908920 0.000000e+00 809.0
38 TraesCS1D01G047300 chr2D 96.708 486 13 3 5113 5596 2992235 2991751 0.000000e+00 806.0
39 TraesCS1D01G047300 chr2D 81.401 414 75 2 2485 2897 460728362 460727950 2.500000e-88 337.0
40 TraesCS1D01G047300 chr3D 96.327 490 17 1 5108 5596 435639781 435639292 0.000000e+00 804.0
41 TraesCS1D01G047300 chr2A 81.250 416 72 6 2485 2897 603549935 603549523 1.160000e-86 331.0
42 TraesCS1D01G047300 chr2A 82.022 89 8 6 1349 1430 35877529 35877616 1.010000e-07 69.4
43 TraesCS1D01G047300 chr2A 83.784 74 6 5 1361 1430 35917051 35917122 1.300000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G047300 chr1D 27574975 27580570 5595 True 10334.000000 10334 100.000000 1 5596 1 chr1D.!!$R1 5595
1 TraesCS1D01G047300 chr1D 27539509 27541498 1989 True 1743.500000 1932 98.055500 3087 5110 2 chr1D.!!$R2 2023
2 TraesCS1D01G047300 chr1D 27545913 27549106 3193 True 1088.500000 1611 97.518000 1821 3095 2 chr1D.!!$R3 1274
3 TraesCS1D01G047300 chr1D 27553697 27557045 3348 True 792.666667 1461 91.501667 1 1825 3 chr1D.!!$R4 1824
4 TraesCS1D01G047300 chr1A 28360541 28365296 4755 True 2874.000000 5408 88.592000 316 5110 2 chr1A.!!$R4 4794
5 TraesCS1D01G047300 chr1A 28378818 28379859 1041 True 1009.000000 1009 84.457000 3987 5032 1 chr1A.!!$R1 1045
6 TraesCS1D01G047300 chr1A 28604542 28605576 1034 True 878.000000 878 82.407000 3790 4862 1 chr1A.!!$R3 1072
7 TraesCS1D01G047300 chr1A 28405866 28406668 802 True 734.000000 734 83.595000 4226 5032 1 chr1A.!!$R2 806
8 TraesCS1D01G047300 chr1B 43042779 43048836 6057 True 1647.000000 2606 92.053250 1 4920 4 chr1B.!!$R4 4919
9 TraesCS1D01G047300 chr1B 43214626 43215665 1039 True 874.000000 874 82.216000 3987 5038 1 chr1B.!!$R3 1051
10 TraesCS1D01G047300 chr5D 221475656 221480188 4532 True 759.250000 1736 84.074750 1099 4497 4 chr5D.!!$R1 3398
11 TraesCS1D01G047300 chr5A 302552176 302556829 4653 False 774.500000 1692 84.993250 1128 4497 4 chr5A.!!$F1 3369
12 TraesCS1D01G047300 chr5B 244006037 244011031 4994 True 921.333333 1585 84.360333 1073 4500 3 chr5B.!!$R1 3427

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
431 437 0.812412 AAGAACACGGTGTTGGGACG 60.812 55.000 29.46 0.0 41.28 4.79 F
801 809 1.003355 CCACGGGACAGTGATGCTT 60.003 57.895 0.00 0.0 44.43 3.91 F
1068 1183 2.234143 ACTTCAGCCTTCCTGCTTTTC 58.766 47.619 0.00 0.0 40.32 2.29 F
1617 1818 3.307904 CCCCTCCGTTTGGTTTATGTACT 60.308 47.826 0.00 0.0 36.30 2.73 F
2750 9246 3.189376 TTCATGGCCGTGCACCAGA 62.189 57.895 20.86 0.0 41.46 3.86 F
3554 10078 2.783135 CCTGTGCACTTCAGGTATGTT 58.217 47.619 19.41 0.0 45.09 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1960 4379 4.022589 CAGTCACATGTGGCAAGAAAGATT 60.023 41.667 30.70 5.21 37.73 2.40 R
2565 9061 1.707427 AGCAGAGACTCCCATTGGTTT 59.293 47.619 1.20 0.00 0.00 3.27 R
2750 9246 4.536489 ACTTAACAACCTTAGAGGCTCCAT 59.464 41.667 11.71 0.00 39.63 3.41 R
3368 9892 3.815401 CCCTGGCATAGATAAAGAAACCG 59.185 47.826 0.00 0.00 0.00 4.44 R
4044 10675 2.372852 GTGGCAACTCCCTCCACTA 58.627 57.895 3.59 0.00 45.04 2.74 R
5454 12118 0.031111 CCCCTCTCCACCATAGTCCA 60.031 60.000 0.00 0.00 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 6.012745 AGGAAGGAAAGATGCAACTAAACAT 58.987 36.000 0.00 0.00 0.00 2.71
68 69 1.064952 GTTTTGTGGTAACTGCAGCGT 59.935 47.619 15.27 4.45 37.61 5.07
83 84 2.571757 CGTGCGTTGAGGCTAGGA 59.428 61.111 0.00 0.00 0.00 2.94
179 183 4.410400 GCTAGGCCAACCCAGCGT 62.410 66.667 5.01 0.00 36.11 5.07
273 277 7.577046 GCCTATAGACACGCTCCTATTATTTGA 60.577 40.741 0.00 0.00 0.00 2.69
277 281 5.812642 AGACACGCTCCTATTATTTGAACTG 59.187 40.000 0.00 0.00 0.00 3.16
303 307 5.415389 GCAAACCCCTCAAAAATATTTGCAT 59.585 36.000 12.51 0.00 46.03 3.96
370 376 0.919710 GCCCACCCTCTAATCCAGTT 59.080 55.000 0.00 0.00 0.00 3.16
372 378 2.482494 CCCACCCTCTAATCCAGTTCT 58.518 52.381 0.00 0.00 0.00 3.01
431 437 0.812412 AAGAACACGGTGTTGGGACG 60.812 55.000 29.46 0.00 41.28 4.79
456 462 6.982724 GGATGCATAAGGGAAAAGAATCTTTG 59.017 38.462 9.21 0.00 0.00 2.77
576 582 7.335422 GTCCATATTATAGTGGATTTGGCTCAG 59.665 40.741 6.80 0.00 45.57 3.35
604 612 3.971894 CGATAGCACCCCTTCCCT 58.028 61.111 0.00 0.00 0.00 4.20
610 618 1.755200 AGCACCCCTTCCCTAAAAGA 58.245 50.000 0.00 0.00 0.00 2.52
801 809 1.003355 CCACGGGACAGTGATGCTT 60.003 57.895 0.00 0.00 44.43 3.91
1068 1183 2.234143 ACTTCAGCCTTCCTGCTTTTC 58.766 47.619 0.00 0.00 40.32 2.29
1115 1237 4.779486 GGGGAGGGGATGGTGGGT 62.779 72.222 0.00 0.00 0.00 4.51
1617 1818 3.307904 CCCCTCCGTTTGGTTTATGTACT 60.308 47.826 0.00 0.00 36.30 2.73
1656 1890 7.391620 AGTACTATGTAGTTTTGCCAAGCTTA 58.608 34.615 0.00 0.00 37.73 3.09
2565 9061 4.393834 TCGTTGGTGATTCAATTGGAAGA 58.606 39.130 5.42 0.00 39.30 2.87
2750 9246 3.189376 TTCATGGCCGTGCACCAGA 62.189 57.895 20.86 0.00 41.46 3.86
2899 9395 6.575162 AAACAATTAGAGGGTAAGCAACTG 57.425 37.500 0.00 0.00 0.00 3.16
2939 9435 5.925509 TGACTTACTAACTTGTCCTGCTTT 58.074 37.500 0.00 0.00 0.00 3.51
2945 9441 5.298347 ACTAACTTGTCCTGCTTTAGTGTC 58.702 41.667 0.00 0.00 32.90 3.67
2948 9444 4.718961 ACTTGTCCTGCTTTAGTGTCAAT 58.281 39.130 0.00 0.00 0.00 2.57
3310 9834 6.424176 GCTCTATGCATCGTATCTGTAGTA 57.576 41.667 0.19 0.00 42.31 1.82
3368 9892 5.107722 CCTTCGGTAGTTGACTTTAAACGAC 60.108 44.000 0.00 0.00 33.82 4.34
3554 10078 2.783135 CCTGTGCACTTCAGGTATGTT 58.217 47.619 19.41 0.00 45.09 2.71
3593 10118 6.504398 TCTATCACTGCTACGTATTCCTTTG 58.496 40.000 0.00 0.00 0.00 2.77
3841 10467 5.215160 GTTGGAAAGTGCTGTTCTTGTATG 58.785 41.667 0.00 0.00 0.00 2.39
3888 10514 4.495690 AAATAGAGGCTTCCTGACTTCC 57.504 45.455 0.00 0.00 31.30 3.46
3944 10575 8.844244 CATTCCCATTTTCAAACCAATTTAACA 58.156 29.630 0.00 0.00 0.00 2.41
3952 10583 8.894768 TTTCAAACCAATTTAACAATAGGTGG 57.105 30.769 0.00 0.00 0.00 4.61
3956 10587 7.604657 AACCAATTTAACAATAGGTGGACAA 57.395 32.000 0.00 0.00 0.00 3.18
3957 10588 7.604657 ACCAATTTAACAATAGGTGGACAAA 57.395 32.000 0.00 0.00 0.00 2.83
3958 10589 8.201242 ACCAATTTAACAATAGGTGGACAAAT 57.799 30.769 0.00 0.00 0.00 2.32
3959 10590 8.655901 ACCAATTTAACAATAGGTGGACAAATT 58.344 29.630 0.00 0.00 31.50 1.82
3960 10591 8.934825 CCAATTTAACAATAGGTGGACAAATTG 58.065 33.333 0.00 0.00 39.88 2.32
3961 10592 9.703892 CAATTTAACAATAGGTGGACAAATTGA 57.296 29.630 0.00 0.00 41.02 2.57
3962 10593 9.705290 AATTTAACAATAGGTGGACAAATTGAC 57.295 29.630 0.00 0.00 34.26 3.18
3963 10594 8.472007 TTTAACAATAGGTGGACAAATTGACT 57.528 30.769 0.00 0.00 34.26 3.41
3964 10595 5.964958 ACAATAGGTGGACAAATTGACTG 57.035 39.130 0.00 0.00 34.26 3.51
3965 10596 5.630121 ACAATAGGTGGACAAATTGACTGA 58.370 37.500 0.00 0.00 34.26 3.41
3966 10597 6.248433 ACAATAGGTGGACAAATTGACTGAT 58.752 36.000 0.00 0.00 34.26 2.90
3967 10598 6.375455 ACAATAGGTGGACAAATTGACTGATC 59.625 38.462 0.00 0.00 34.26 2.92
3968 10599 3.690460 AGGTGGACAAATTGACTGATCC 58.310 45.455 0.00 0.00 0.00 3.36
3969 10600 3.074390 AGGTGGACAAATTGACTGATCCA 59.926 43.478 0.00 0.00 33.86 3.41
3970 10601 4.019174 GGTGGACAAATTGACTGATCCAT 58.981 43.478 0.00 0.00 38.45 3.41
3971 10602 5.044919 AGGTGGACAAATTGACTGATCCATA 60.045 40.000 0.00 0.00 38.45 2.74
3972 10603 5.829924 GGTGGACAAATTGACTGATCCATAT 59.170 40.000 0.00 0.00 38.45 1.78
3973 10604 6.322201 GGTGGACAAATTGACTGATCCATATT 59.678 38.462 0.00 0.00 38.45 1.28
3974 10605 7.147846 GGTGGACAAATTGACTGATCCATATTT 60.148 37.037 0.00 0.00 38.45 1.40
3975 10606 7.703621 GTGGACAAATTGACTGATCCATATTTG 59.296 37.037 0.00 0.00 38.45 2.32
3976 10607 7.147863 TGGACAAATTGACTGATCCATATTTGG 60.148 37.037 0.00 0.00 45.15 3.28
3977 10608 6.576185 ACAAATTGACTGATCCATATTTGGC 58.424 36.000 0.00 0.00 43.29 4.52
3978 10609 6.381994 ACAAATTGACTGATCCATATTTGGCT 59.618 34.615 0.00 0.00 43.29 4.75
3979 10610 6.645790 AATTGACTGATCCATATTTGGCTC 57.354 37.500 0.00 0.00 43.29 4.70
3980 10611 4.776435 TGACTGATCCATATTTGGCTCA 57.224 40.909 8.23 8.23 44.01 4.26
3981 10612 5.114764 TGACTGATCCATATTTGGCTCAA 57.885 39.130 9.56 0.00 45.14 3.02
3982 10613 5.508567 TGACTGATCCATATTTGGCTCAAA 58.491 37.500 9.56 3.33 45.14 2.69
3983 10614 5.951148 TGACTGATCCATATTTGGCTCAAAA 59.049 36.000 9.56 0.00 45.14 2.44
3984 10615 6.436847 TGACTGATCCATATTTGGCTCAAAAA 59.563 34.615 9.56 0.00 45.14 1.94
4044 10675 1.482593 CTTAGAGGTGGCGACTGGAAT 59.517 52.381 0.00 0.00 0.00 3.01
4379 11013 4.935352 TGGACCAAAATGTTTCTCTTGG 57.065 40.909 0.00 0.00 43.33 3.61
4617 11279 6.543465 CCAATATCTATGTTTCACAGAGGCAA 59.457 38.462 0.00 0.00 37.96 4.52
4631 11294 3.319122 CAGAGGCAACCAAAGTTTTAGCT 59.681 43.478 0.00 0.00 32.45 3.32
4672 11335 2.810274 GGTGCTGCATTCGATGATGTAT 59.190 45.455 5.27 0.00 0.00 2.29
4890 11553 5.243730 GGGATGACATGGTAAAATGTATGGG 59.756 44.000 0.00 0.00 40.87 4.00
5001 11665 5.360999 ACATTGAAGTACTGAGATGATCCGA 59.639 40.000 15.51 0.00 0.00 4.55
5015 11679 7.230712 TGAGATGATCCGATACTTTAGTGCTAA 59.769 37.037 0.00 0.00 0.00 3.09
5111 11775 2.374226 CCGCAGCAACGCCATTTTG 61.374 57.895 0.00 0.00 0.00 2.44
5112 11776 1.661197 CGCAGCAACGCCATTTTGT 60.661 52.632 0.00 0.00 0.00 2.83
5113 11777 1.214373 CGCAGCAACGCCATTTTGTT 61.214 50.000 0.00 0.00 0.00 2.83
5114 11778 0.232816 GCAGCAACGCCATTTTGTTG 59.767 50.000 0.94 0.94 46.31 3.33
5115 11779 0.860533 CAGCAACGCCATTTTGTTGG 59.139 50.000 7.15 0.00 44.30 3.77
5116 11780 0.249826 AGCAACGCCATTTTGTTGGG 60.250 50.000 7.15 0.00 44.30 4.12
5121 11785 3.209266 GCCATTTTGTTGGGGAACG 57.791 52.632 0.00 0.00 37.24 3.95
5122 11786 0.391228 GCCATTTTGTTGGGGAACGT 59.609 50.000 0.00 0.00 37.24 3.99
5123 11787 1.614413 GCCATTTTGTTGGGGAACGTA 59.386 47.619 0.00 0.00 37.24 3.57
5124 11788 2.608506 GCCATTTTGTTGGGGAACGTAC 60.609 50.000 0.00 0.00 37.24 3.67
5125 11789 2.888414 CCATTTTGTTGGGGAACGTACT 59.112 45.455 0.00 0.00 32.80 2.73
5126 11790 4.073549 CCATTTTGTTGGGGAACGTACTA 58.926 43.478 0.00 0.00 32.80 1.82
5127 11791 4.519730 CCATTTTGTTGGGGAACGTACTAA 59.480 41.667 0.00 0.00 32.80 2.24
5128 11792 5.184287 CCATTTTGTTGGGGAACGTACTAAT 59.816 40.000 0.00 0.00 32.80 1.73
5129 11793 6.294843 CCATTTTGTTGGGGAACGTACTAATT 60.295 38.462 0.00 0.00 32.80 1.40
5130 11794 6.712179 TTTTGTTGGGGAACGTACTAATTT 57.288 33.333 0.00 0.00 0.00 1.82
5131 11795 6.712179 TTTGTTGGGGAACGTACTAATTTT 57.288 33.333 0.00 0.00 0.00 1.82
5132 11796 7.814264 TTTGTTGGGGAACGTACTAATTTTA 57.186 32.000 0.00 0.00 0.00 1.52
5133 11797 7.814264 TTGTTGGGGAACGTACTAATTTTAA 57.186 32.000 0.00 0.00 0.00 1.52
5134 11798 7.814264 TGTTGGGGAACGTACTAATTTTAAA 57.186 32.000 0.00 0.00 0.00 1.52
5135 11799 8.230472 TGTTGGGGAACGTACTAATTTTAAAA 57.770 30.769 2.51 2.51 0.00 1.52
5136 11800 8.689972 TGTTGGGGAACGTACTAATTTTAAAAA 58.310 29.630 4.44 0.00 0.00 1.94
5153 11817 2.325509 AAAAATTCCTACGCACACGC 57.674 45.000 0.00 0.00 45.53 5.34
5154 11818 1.231221 AAAATTCCTACGCACACGCA 58.769 45.000 0.00 0.00 45.53 5.24
5155 11819 1.231221 AAATTCCTACGCACACGCAA 58.769 45.000 0.00 0.00 45.53 4.85
5156 11820 0.796312 AATTCCTACGCACACGCAAG 59.204 50.000 0.00 0.00 45.53 4.01
5157 11821 0.037697 ATTCCTACGCACACGCAAGA 60.038 50.000 0.00 0.00 45.53 3.02
5158 11822 0.037697 TTCCTACGCACACGCAAGAT 60.038 50.000 0.00 0.00 45.53 2.40
5159 11823 0.457853 TCCTACGCACACGCAAGATC 60.458 55.000 0.00 0.00 45.53 2.75
5160 11824 0.735978 CCTACGCACACGCAAGATCA 60.736 55.000 0.00 0.00 45.53 2.92
5161 11825 1.280982 CTACGCACACGCAAGATCAT 58.719 50.000 0.00 0.00 45.53 2.45
5162 11826 0.998669 TACGCACACGCAAGATCATG 59.001 50.000 0.00 0.00 45.53 3.07
5163 11827 1.061411 CGCACACGCAAGATCATGG 59.939 57.895 0.00 0.00 43.62 3.66
5164 11828 1.638388 CGCACACGCAAGATCATGGT 61.638 55.000 0.00 0.00 43.62 3.55
5165 11829 0.179181 GCACACGCAAGATCATGGTG 60.179 55.000 14.17 14.17 43.62 4.17
5166 11830 1.441738 CACACGCAAGATCATGGTGA 58.558 50.000 19.56 0.00 43.62 4.02
5167 11831 2.011947 CACACGCAAGATCATGGTGAT 58.988 47.619 19.56 0.00 40.34 3.06
5168 11832 2.011947 ACACGCAAGATCATGGTGATG 58.988 47.619 19.56 8.58 37.20 3.07
5169 11833 1.019673 ACGCAAGATCATGGTGATGC 58.980 50.000 0.00 3.06 37.20 3.91
5170 11834 1.018910 CGCAAGATCATGGTGATGCA 58.981 50.000 11.83 0.00 37.20 3.96
5171 11835 1.607148 CGCAAGATCATGGTGATGCAT 59.393 47.619 0.00 0.00 37.20 3.96
5172 11836 2.809696 CGCAAGATCATGGTGATGCATA 59.190 45.455 0.00 0.00 37.20 3.14
5173 11837 3.120304 CGCAAGATCATGGTGATGCATAG 60.120 47.826 0.00 0.00 37.20 2.23
5174 11838 3.366070 GCAAGATCATGGTGATGCATAGC 60.366 47.826 0.00 0.00 37.20 2.97
5175 11839 3.782656 AGATCATGGTGATGCATAGCA 57.217 42.857 0.00 4.86 44.86 3.49
5176 11840 4.094830 AGATCATGGTGATGCATAGCAA 57.905 40.909 0.00 0.00 43.62 3.91
5177 11841 3.819337 AGATCATGGTGATGCATAGCAAC 59.181 43.478 0.00 0.00 43.62 4.17
5178 11842 1.941975 TCATGGTGATGCATAGCAACG 59.058 47.619 0.00 1.35 43.62 4.10
5179 11843 1.941975 CATGGTGATGCATAGCAACGA 59.058 47.619 0.00 0.00 43.62 3.85
5180 11844 1.655484 TGGTGATGCATAGCAACGAG 58.345 50.000 0.00 0.00 43.62 4.18
5181 11845 1.206849 TGGTGATGCATAGCAACGAGA 59.793 47.619 0.00 0.00 43.62 4.04
5182 11846 1.863454 GGTGATGCATAGCAACGAGAG 59.137 52.381 0.00 0.00 43.62 3.20
5183 11847 1.863454 GTGATGCATAGCAACGAGAGG 59.137 52.381 0.00 0.00 43.62 3.69
5184 11848 1.202568 TGATGCATAGCAACGAGAGGG 60.203 52.381 0.00 0.00 43.62 4.30
5185 11849 0.107456 ATGCATAGCAACGAGAGGGG 59.893 55.000 0.00 0.00 43.62 4.79
5186 11850 1.264749 TGCATAGCAACGAGAGGGGT 61.265 55.000 0.00 0.00 34.76 4.95
5187 11851 0.811616 GCATAGCAACGAGAGGGGTG 60.812 60.000 0.00 0.00 0.00 4.61
5188 11852 0.824109 CATAGCAACGAGAGGGGTGA 59.176 55.000 0.00 0.00 0.00 4.02
5189 11853 1.115467 ATAGCAACGAGAGGGGTGAG 58.885 55.000 0.00 0.00 0.00 3.51
5190 11854 0.251653 TAGCAACGAGAGGGGTGAGT 60.252 55.000 0.00 0.00 0.00 3.41
5191 11855 1.374758 GCAACGAGAGGGGTGAGTG 60.375 63.158 0.00 0.00 0.00 3.51
5192 11856 2.050269 CAACGAGAGGGGTGAGTGT 58.950 57.895 0.00 0.00 0.00 3.55
5193 11857 0.393077 CAACGAGAGGGGTGAGTGTT 59.607 55.000 0.00 0.00 0.00 3.32
5194 11858 0.393077 AACGAGAGGGGTGAGTGTTG 59.607 55.000 0.00 0.00 0.00 3.33
5195 11859 0.759436 ACGAGAGGGGTGAGTGTTGT 60.759 55.000 0.00 0.00 0.00 3.32
5196 11860 0.038159 CGAGAGGGGTGAGTGTTGTC 60.038 60.000 0.00 0.00 0.00 3.18
5197 11861 0.321996 GAGAGGGGTGAGTGTTGTCC 59.678 60.000 0.00 0.00 0.00 4.02
5198 11862 0.399949 AGAGGGGTGAGTGTTGTCCA 60.400 55.000 0.00 0.00 0.00 4.02
5199 11863 0.250338 GAGGGGTGAGTGTTGTCCAC 60.250 60.000 0.00 0.00 44.89 4.02
5207 11871 3.206090 GTGTTGTCCACGTACCCTC 57.794 57.895 0.00 0.00 33.61 4.30
5208 11872 0.665369 GTGTTGTCCACGTACCCTCG 60.665 60.000 0.00 0.00 33.61 4.63
5209 11873 1.108727 TGTTGTCCACGTACCCTCGT 61.109 55.000 0.00 0.00 45.10 4.18
5210 11874 0.881118 GTTGTCCACGTACCCTCGTA 59.119 55.000 0.00 0.00 42.27 3.43
5211 11875 1.135575 GTTGTCCACGTACCCTCGTAG 60.136 57.143 0.00 0.00 42.27 3.51
5212 11876 0.324614 TGTCCACGTACCCTCGTAGA 59.675 55.000 0.00 0.00 42.27 2.59
5213 11877 0.729690 GTCCACGTACCCTCGTAGAC 59.270 60.000 0.00 2.79 42.50 2.59
5214 11878 0.392998 TCCACGTACCCTCGTAGACC 60.393 60.000 0.00 0.00 42.27 3.85
5215 11879 1.709147 CCACGTACCCTCGTAGACCG 61.709 65.000 0.00 0.00 42.27 4.79
5216 11880 0.740868 CACGTACCCTCGTAGACCGA 60.741 60.000 0.00 0.00 45.00 4.69
5217 11881 0.036388 ACGTACCCTCGTAGACCGAA 60.036 55.000 0.00 0.00 46.75 4.30
5218 11882 1.086696 CGTACCCTCGTAGACCGAAA 58.913 55.000 0.00 0.00 46.75 3.46
5219 11883 1.063174 CGTACCCTCGTAGACCGAAAG 59.937 57.143 0.00 0.00 46.75 2.62
5220 11884 1.098050 TACCCTCGTAGACCGAAAGC 58.902 55.000 0.00 0.00 46.75 3.51
5221 11885 0.896940 ACCCTCGTAGACCGAAAGCA 60.897 55.000 0.00 0.00 46.75 3.91
5222 11886 0.179134 CCCTCGTAGACCGAAAGCAG 60.179 60.000 0.00 0.00 46.75 4.24
5223 11887 0.809385 CCTCGTAGACCGAAAGCAGA 59.191 55.000 0.00 0.00 46.75 4.26
5224 11888 1.201647 CCTCGTAGACCGAAAGCAGAA 59.798 52.381 0.00 0.00 46.75 3.02
5225 11889 2.520979 CTCGTAGACCGAAAGCAGAAG 58.479 52.381 0.00 0.00 46.75 2.85
5226 11890 0.992802 CGTAGACCGAAAGCAGAAGC 59.007 55.000 0.00 0.00 39.56 3.86
5227 11891 2.635856 CGTAGACCGAAAGCAGAAGCG 61.636 57.143 0.00 0.00 42.50 4.68
5245 11909 1.823260 CGTTAGCACAACGCGGTTGA 61.823 55.000 22.26 3.38 45.28 3.18
5246 11910 0.515564 GTTAGCACAACGCGGTTGAT 59.484 50.000 22.26 13.46 45.28 2.57
5247 11911 0.515127 TTAGCACAACGCGGTTGATG 59.485 50.000 22.26 17.39 45.28 3.07
5248 11912 0.601576 TAGCACAACGCGGTTGATGT 60.602 50.000 22.26 11.72 45.28 3.06
5249 11913 0.601576 AGCACAACGCGGTTGATGTA 60.602 50.000 22.26 0.00 45.28 2.29
5250 11914 0.179225 GCACAACGCGGTTGATGTAG 60.179 55.000 22.26 1.41 45.28 2.74
5251 11915 1.144969 CACAACGCGGTTGATGTAGT 58.855 50.000 22.26 2.04 45.28 2.73
5252 11916 1.126113 CACAACGCGGTTGATGTAGTC 59.874 52.381 22.26 0.00 45.28 2.59
5253 11917 0.365523 CAACGCGGTTGATGTAGTCG 59.634 55.000 12.47 0.00 45.28 4.18
5254 11918 0.038892 AACGCGGTTGATGTAGTCGT 60.039 50.000 12.47 0.00 0.00 4.34
5255 11919 0.804364 ACGCGGTTGATGTAGTCGTA 59.196 50.000 12.47 0.00 0.00 3.43
5256 11920 1.186030 CGCGGTTGATGTAGTCGTAC 58.814 55.000 0.00 0.00 0.00 3.67
5257 11921 1.466192 CGCGGTTGATGTAGTCGTACA 60.466 52.381 0.00 0.00 43.43 2.90
5267 11931 5.752892 ATGTAGTCGTACATCTTCACGAT 57.247 39.130 0.00 0.00 45.20 3.73
5268 11932 5.749620 ATGTAGTCGTACATCTTCACGATC 58.250 41.667 0.00 0.00 45.20 3.69
5269 11933 5.277876 ATGTAGTCGTACATCTTCACGATCC 60.278 44.000 0.00 0.00 45.20 3.36
5270 11934 2.750301 TCGTACATCTTCACGATCCG 57.250 50.000 0.00 0.00 41.89 4.18
5271 11935 2.282407 TCGTACATCTTCACGATCCGA 58.718 47.619 0.00 0.00 41.89 4.55
5272 11936 2.031314 TCGTACATCTTCACGATCCGAC 59.969 50.000 0.00 0.00 41.89 4.79
5273 11937 2.728922 GTACATCTTCACGATCCGACC 58.271 52.381 0.00 0.00 0.00 4.79
5274 11938 0.100682 ACATCTTCACGATCCGACCG 59.899 55.000 0.00 0.00 0.00 4.79
5275 11939 0.380733 CATCTTCACGATCCGACCGA 59.619 55.000 0.00 0.00 0.00 4.69
5276 11940 1.001268 CATCTTCACGATCCGACCGAT 60.001 52.381 0.00 0.00 0.00 4.18
5277 11941 0.661552 TCTTCACGATCCGACCGATC 59.338 55.000 0.00 0.00 43.58 3.69
5278 11942 0.380733 CTTCACGATCCGACCGATCA 59.619 55.000 0.00 0.00 46.85 2.92
5279 11943 0.812549 TTCACGATCCGACCGATCAA 59.187 50.000 0.00 0.00 46.85 2.57
5280 11944 0.380733 TCACGATCCGACCGATCAAG 59.619 55.000 0.00 0.00 46.85 3.02
5281 11945 0.100682 CACGATCCGACCGATCAAGT 59.899 55.000 0.00 0.00 46.85 3.16
5282 11946 1.332686 CACGATCCGACCGATCAAGTA 59.667 52.381 0.00 0.00 46.85 2.24
5283 11947 2.031069 CACGATCCGACCGATCAAGTAT 60.031 50.000 0.00 0.00 46.85 2.12
5284 11948 2.225963 ACGATCCGACCGATCAAGTATC 59.774 50.000 0.00 0.00 46.85 2.24
5293 11957 2.886324 GATCAAGTATCGAACGCACG 57.114 50.000 0.00 0.00 0.00 5.34
5294 11958 1.517276 GATCAAGTATCGAACGCACGG 59.483 52.381 0.00 0.00 0.00 4.94
5295 11959 1.074319 TCAAGTATCGAACGCACGGC 61.074 55.000 0.00 0.00 0.00 5.68
5296 11960 1.080366 AAGTATCGAACGCACGGCA 60.080 52.632 0.00 0.00 0.00 5.69
5297 11961 1.349259 AAGTATCGAACGCACGGCAC 61.349 55.000 0.00 1.63 0.00 5.01
5298 11962 2.507547 TATCGAACGCACGGCACC 60.508 61.111 0.00 0.00 0.00 5.01
5299 11963 2.997075 TATCGAACGCACGGCACCT 61.997 57.895 0.00 0.00 0.00 4.00
5300 11964 2.877360 TATCGAACGCACGGCACCTC 62.877 60.000 0.00 0.00 0.00 3.85
5310 11974 2.435059 GGCACCTCCGAGTTCAGC 60.435 66.667 0.00 0.00 0.00 4.26
5311 11975 2.343758 GCACCTCCGAGTTCAGCA 59.656 61.111 0.00 0.00 0.00 4.41
5312 11976 2.029844 GCACCTCCGAGTTCAGCAC 61.030 63.158 0.00 0.00 0.00 4.40
5313 11977 1.367471 CACCTCCGAGTTCAGCACA 59.633 57.895 0.00 0.00 0.00 4.57
5314 11978 0.946221 CACCTCCGAGTTCAGCACAC 60.946 60.000 0.00 0.00 0.00 3.82
5315 11979 1.734477 CCTCCGAGTTCAGCACACG 60.734 63.158 0.00 0.00 39.03 4.49
5316 11980 1.007271 CTCCGAGTTCAGCACACGT 60.007 57.895 0.00 0.00 37.75 4.49
5317 11981 0.597637 CTCCGAGTTCAGCACACGTT 60.598 55.000 0.00 0.00 37.75 3.99
5318 11982 0.596600 TCCGAGTTCAGCACACGTTC 60.597 55.000 0.00 0.00 37.75 3.95
5319 11983 0.874175 CCGAGTTCAGCACACGTTCA 60.874 55.000 0.00 0.00 37.75 3.18
5320 11984 0.504384 CGAGTTCAGCACACGTTCAG 59.496 55.000 0.00 0.00 35.01 3.02
5321 11985 0.233332 GAGTTCAGCACACGTTCAGC 59.767 55.000 0.00 0.00 0.00 4.26
5322 11986 1.160329 AGTTCAGCACACGTTCAGCC 61.160 55.000 0.00 0.00 0.00 4.85
5323 11987 1.891919 TTCAGCACACGTTCAGCCC 60.892 57.895 0.00 0.00 0.00 5.19
5324 11988 3.716006 CAGCACACGTTCAGCCCG 61.716 66.667 0.00 0.00 0.00 6.13
5325 11989 3.923864 AGCACACGTTCAGCCCGA 61.924 61.111 0.00 0.00 0.00 5.14
5326 11990 2.742372 GCACACGTTCAGCCCGAT 60.742 61.111 0.00 0.00 0.00 4.18
5327 11991 3.027170 GCACACGTTCAGCCCGATG 62.027 63.158 0.00 0.00 0.00 3.84
5328 11992 1.374125 CACACGTTCAGCCCGATGA 60.374 57.895 0.00 0.00 0.00 2.92
5329 11993 1.374252 ACACGTTCAGCCCGATGAC 60.374 57.895 0.00 0.00 0.00 3.06
5330 11994 2.126071 ACGTTCAGCCCGATGACG 60.126 61.111 0.00 0.00 39.43 4.35
5331 11995 2.126071 CGTTCAGCCCGATGACGT 60.126 61.111 0.00 0.00 37.88 4.34
5332 11996 2.158959 CGTTCAGCCCGATGACGTC 61.159 63.158 9.11 9.11 37.88 4.34
5333 11997 1.810030 GTTCAGCCCGATGACGTCC 60.810 63.158 14.12 0.00 37.88 4.79
5334 11998 3.014085 TTCAGCCCGATGACGTCCC 62.014 63.158 14.12 3.95 37.88 4.46
5335 11999 3.461773 CAGCCCGATGACGTCCCT 61.462 66.667 14.12 0.00 37.88 4.20
5336 12000 3.148279 AGCCCGATGACGTCCCTC 61.148 66.667 14.12 9.05 37.88 4.30
5337 12001 4.570663 GCCCGATGACGTCCCTCG 62.571 72.222 23.26 23.26 46.00 4.63
5338 12002 2.827190 CCCGATGACGTCCCTCGA 60.827 66.667 28.68 7.05 42.86 4.04
5339 12003 2.412323 CCCGATGACGTCCCTCGAA 61.412 63.158 28.68 6.36 42.86 3.71
5340 12004 1.226603 CCGATGACGTCCCTCGAAC 60.227 63.158 28.68 4.93 42.86 3.95
5341 12005 1.654954 CCGATGACGTCCCTCGAACT 61.655 60.000 28.68 1.14 42.86 3.01
5342 12006 0.248134 CGATGACGTCCCTCGAACTC 60.248 60.000 24.99 5.48 42.86 3.01
5343 12007 0.100861 GATGACGTCCCTCGAACTCC 59.899 60.000 14.12 0.00 42.86 3.85
5344 12008 1.654954 ATGACGTCCCTCGAACTCCG 61.655 60.000 14.12 0.00 42.86 4.63
5345 12009 2.033141 ACGTCCCTCGAACTCCGA 59.967 61.111 1.88 0.00 46.35 4.55
5352 12016 3.207354 TCGAACTCCGATCCAGCC 58.793 61.111 0.00 0.00 43.23 4.85
5353 12017 2.278857 CGAACTCCGATCCAGCCG 60.279 66.667 0.00 0.00 41.76 5.52
5354 12018 2.771639 CGAACTCCGATCCAGCCGA 61.772 63.158 0.00 0.00 41.76 5.54
5355 12019 1.066587 GAACTCCGATCCAGCCGAG 59.933 63.158 0.00 0.00 0.00 4.63
5356 12020 1.668101 GAACTCCGATCCAGCCGAGT 61.668 60.000 0.00 0.00 0.00 4.18
5357 12021 1.949847 AACTCCGATCCAGCCGAGTG 61.950 60.000 0.00 0.00 0.00 3.51
5358 12022 2.362503 TCCGATCCAGCCGAGTGT 60.363 61.111 0.00 0.00 0.00 3.55
5359 12023 1.949847 CTCCGATCCAGCCGAGTGTT 61.950 60.000 0.00 0.00 0.00 3.32
5360 12024 1.811266 CCGATCCAGCCGAGTGTTG 60.811 63.158 0.00 0.00 0.00 3.33
5361 12025 1.215382 CGATCCAGCCGAGTGTTGA 59.785 57.895 0.00 0.00 0.00 3.18
5362 12026 0.803768 CGATCCAGCCGAGTGTTGAG 60.804 60.000 0.00 0.00 0.00 3.02
5363 12027 0.460987 GATCCAGCCGAGTGTTGAGG 60.461 60.000 0.00 0.00 0.00 3.86
5364 12028 1.903877 ATCCAGCCGAGTGTTGAGGG 61.904 60.000 0.00 0.00 0.00 4.30
5365 12029 2.583441 CCAGCCGAGTGTTGAGGGA 61.583 63.158 0.00 0.00 0.00 4.20
5366 12030 1.079543 CAGCCGAGTGTTGAGGGAG 60.080 63.158 0.00 0.00 0.00 4.30
5367 12031 1.228894 AGCCGAGTGTTGAGGGAGA 60.229 57.895 0.00 0.00 0.00 3.71
5368 12032 1.216710 GCCGAGTGTTGAGGGAGAG 59.783 63.158 0.00 0.00 0.00 3.20
5369 12033 1.536943 GCCGAGTGTTGAGGGAGAGT 61.537 60.000 0.00 0.00 0.00 3.24
5370 12034 0.969894 CCGAGTGTTGAGGGAGAGTT 59.030 55.000 0.00 0.00 0.00 3.01
5371 12035 1.344763 CCGAGTGTTGAGGGAGAGTTT 59.655 52.381 0.00 0.00 0.00 2.66
5372 12036 2.610727 CCGAGTGTTGAGGGAGAGTTTC 60.611 54.545 0.00 0.00 0.00 2.78
5373 12037 2.678324 GAGTGTTGAGGGAGAGTTTCG 58.322 52.381 0.00 0.00 0.00 3.46
5374 12038 2.036089 GAGTGTTGAGGGAGAGTTTCGT 59.964 50.000 0.00 0.00 0.00 3.85
5375 12039 2.036089 AGTGTTGAGGGAGAGTTTCGTC 59.964 50.000 0.00 0.00 0.00 4.20
5376 12040 2.036387 TGTTGAGGGAGAGTTTCGTCA 58.964 47.619 0.00 0.00 0.00 4.35
5377 12041 2.035961 TGTTGAGGGAGAGTTTCGTCAG 59.964 50.000 0.00 0.00 0.00 3.51
5378 12042 0.603569 TGAGGGAGAGTTTCGTCAGC 59.396 55.000 0.00 0.00 0.00 4.26
5379 12043 0.603569 GAGGGAGAGTTTCGTCAGCA 59.396 55.000 0.00 0.00 0.00 4.41
5380 12044 0.318762 AGGGAGAGTTTCGTCAGCAC 59.681 55.000 0.00 0.00 0.00 4.40
5407 12071 3.933155 GTGGTGACGATGATGATGTTC 57.067 47.619 0.00 0.00 0.00 3.18
5408 12072 3.525537 GTGGTGACGATGATGATGTTCT 58.474 45.455 0.00 0.00 0.00 3.01
5409 12073 4.682787 GTGGTGACGATGATGATGTTCTA 58.317 43.478 0.00 0.00 0.00 2.10
5410 12074 4.504461 GTGGTGACGATGATGATGTTCTAC 59.496 45.833 0.00 0.00 0.00 2.59
5411 12075 4.051922 GGTGACGATGATGATGTTCTACC 58.948 47.826 0.00 0.00 0.00 3.18
5412 12076 4.441495 GGTGACGATGATGATGTTCTACCA 60.441 45.833 0.00 0.00 0.00 3.25
5413 12077 5.109210 GTGACGATGATGATGTTCTACCAA 58.891 41.667 0.00 0.00 0.00 3.67
5414 12078 5.005779 GTGACGATGATGATGTTCTACCAAC 59.994 44.000 0.00 0.00 0.00 3.77
5415 12079 4.112634 ACGATGATGATGTTCTACCAACG 58.887 43.478 0.00 0.00 0.00 4.10
5416 12080 3.060272 CGATGATGATGTTCTACCAACGC 60.060 47.826 0.00 0.00 0.00 4.84
5417 12081 3.326836 TGATGATGTTCTACCAACGCA 57.673 42.857 0.00 0.00 0.00 5.24
5418 12082 3.261580 TGATGATGTTCTACCAACGCAG 58.738 45.455 0.00 0.00 0.00 5.18
5419 12083 2.093306 TGATGTTCTACCAACGCAGG 57.907 50.000 0.00 0.00 0.00 4.85
5420 12084 1.338674 TGATGTTCTACCAACGCAGGG 60.339 52.381 0.00 0.00 0.00 4.45
5421 12085 0.676782 ATGTTCTACCAACGCAGGGC 60.677 55.000 0.00 0.00 0.00 5.19
5422 12086 1.003718 GTTCTACCAACGCAGGGCT 60.004 57.895 0.00 0.00 0.00 5.19
5423 12087 0.605589 GTTCTACCAACGCAGGGCTT 60.606 55.000 0.00 0.00 0.00 4.35
5424 12088 0.321298 TTCTACCAACGCAGGGCTTC 60.321 55.000 0.00 0.00 0.00 3.86
5425 12089 2.047655 TACCAACGCAGGGCTTCG 60.048 61.111 0.00 0.00 0.00 3.79
5438 12102 2.125512 CTTCGCCTAAGCACCGCT 60.126 61.111 0.00 0.00 42.56 5.52
5439 12103 1.141019 CTTCGCCTAAGCACCGCTA 59.859 57.895 0.00 0.00 38.25 4.26
5440 12104 1.146358 CTTCGCCTAAGCACCGCTAC 61.146 60.000 0.00 0.00 38.25 3.58
5441 12105 1.879737 TTCGCCTAAGCACCGCTACA 61.880 55.000 0.00 0.00 38.25 2.74
5442 12106 1.878522 CGCCTAAGCACCGCTACAG 60.879 63.158 0.00 0.00 38.25 2.74
5443 12107 1.218316 GCCTAAGCACCGCTACAGT 59.782 57.895 0.00 0.00 38.25 3.55
5444 12108 0.458669 GCCTAAGCACCGCTACAGTA 59.541 55.000 0.00 0.00 38.25 2.74
5445 12109 1.068741 GCCTAAGCACCGCTACAGTAT 59.931 52.381 0.00 0.00 38.25 2.12
5446 12110 2.483188 GCCTAAGCACCGCTACAGTATT 60.483 50.000 0.00 0.00 38.25 1.89
5447 12111 3.243636 GCCTAAGCACCGCTACAGTATTA 60.244 47.826 0.00 0.00 38.25 0.98
5448 12112 4.560919 GCCTAAGCACCGCTACAGTATTAT 60.561 45.833 0.00 0.00 38.25 1.28
5449 12113 5.162075 CCTAAGCACCGCTACAGTATTATC 58.838 45.833 0.00 0.00 38.25 1.75
5450 12114 3.284323 AGCACCGCTACAGTATTATCG 57.716 47.619 0.00 0.00 36.99 2.92
5451 12115 2.882761 AGCACCGCTACAGTATTATCGA 59.117 45.455 0.00 0.00 36.99 3.59
5452 12116 3.058155 AGCACCGCTACAGTATTATCGAG 60.058 47.826 0.00 0.00 36.99 4.04
5453 12117 3.822996 CACCGCTACAGTATTATCGAGG 58.177 50.000 0.00 0.00 0.00 4.63
5454 12118 3.252701 CACCGCTACAGTATTATCGAGGT 59.747 47.826 0.00 0.00 0.00 3.85
5455 12119 3.252701 ACCGCTACAGTATTATCGAGGTG 59.747 47.826 0.00 0.00 0.00 4.00
5456 12120 3.366070 CCGCTACAGTATTATCGAGGTGG 60.366 52.174 0.00 0.00 0.00 4.61
5457 12121 3.501062 CGCTACAGTATTATCGAGGTGGA 59.499 47.826 0.00 0.00 0.00 4.02
5458 12122 4.613167 CGCTACAGTATTATCGAGGTGGAC 60.613 50.000 0.00 0.00 0.00 4.02
5459 12123 4.519730 GCTACAGTATTATCGAGGTGGACT 59.480 45.833 0.00 0.00 0.00 3.85
5460 12124 5.704515 GCTACAGTATTATCGAGGTGGACTA 59.295 44.000 0.00 0.00 0.00 2.59
5461 12125 6.374894 GCTACAGTATTATCGAGGTGGACTAT 59.625 42.308 0.00 0.00 0.00 2.12
5462 12126 6.576662 ACAGTATTATCGAGGTGGACTATG 57.423 41.667 0.00 0.00 0.00 2.23
5463 12127 5.477291 ACAGTATTATCGAGGTGGACTATGG 59.523 44.000 0.00 0.00 0.00 2.74
5464 12128 5.477291 CAGTATTATCGAGGTGGACTATGGT 59.523 44.000 0.00 0.00 0.00 3.55
5465 12129 4.873746 ATTATCGAGGTGGACTATGGTG 57.126 45.455 0.00 0.00 0.00 4.17
5466 12130 1.414158 ATCGAGGTGGACTATGGTGG 58.586 55.000 0.00 0.00 0.00 4.61
5467 12131 0.333652 TCGAGGTGGACTATGGTGGA 59.666 55.000 0.00 0.00 0.00 4.02
5468 12132 0.747255 CGAGGTGGACTATGGTGGAG 59.253 60.000 0.00 0.00 0.00 3.86
5469 12133 1.685180 CGAGGTGGACTATGGTGGAGA 60.685 57.143 0.00 0.00 0.00 3.71
5470 12134 2.035632 GAGGTGGACTATGGTGGAGAG 58.964 57.143 0.00 0.00 0.00 3.20
5471 12135 1.123928 GGTGGACTATGGTGGAGAGG 58.876 60.000 0.00 0.00 0.00 3.69
5472 12136 1.123928 GTGGACTATGGTGGAGAGGG 58.876 60.000 0.00 0.00 0.00 4.30
5473 12137 0.031111 TGGACTATGGTGGAGAGGGG 60.031 60.000 0.00 0.00 0.00 4.79
5474 12138 1.411651 GGACTATGGTGGAGAGGGGC 61.412 65.000 0.00 0.00 0.00 5.80
5475 12139 0.691078 GACTATGGTGGAGAGGGGCA 60.691 60.000 0.00 0.00 0.00 5.36
5476 12140 0.983378 ACTATGGTGGAGAGGGGCAC 60.983 60.000 0.00 0.00 0.00 5.01
5498 12162 4.530094 CGCATACGGCTAAAAGATCAAA 57.470 40.909 0.00 0.00 41.67 2.69
5499 12163 4.271687 CGCATACGGCTAAAAGATCAAAC 58.728 43.478 0.00 0.00 41.67 2.93
5500 12164 4.271687 GCATACGGCTAAAAGATCAAACG 58.728 43.478 0.00 0.00 40.25 3.60
5501 12165 4.033587 GCATACGGCTAAAAGATCAAACGA 59.966 41.667 0.00 0.00 40.25 3.85
5502 12166 5.277345 GCATACGGCTAAAAGATCAAACGAT 60.277 40.000 0.00 0.00 40.25 3.73
5503 12167 4.859629 ACGGCTAAAAGATCAAACGATC 57.140 40.909 0.00 0.00 39.78 3.69
5504 12168 4.250464 ACGGCTAAAAGATCAAACGATCA 58.750 39.130 5.33 0.00 41.60 2.92
5505 12169 4.693566 ACGGCTAAAAGATCAAACGATCAA 59.306 37.500 5.33 0.00 41.60 2.57
5506 12170 5.354234 ACGGCTAAAAGATCAAACGATCAAT 59.646 36.000 5.33 0.00 41.60 2.57
5507 12171 6.128007 ACGGCTAAAAGATCAAACGATCAATT 60.128 34.615 5.33 2.62 41.60 2.32
5508 12172 6.195244 CGGCTAAAAGATCAAACGATCAATTG 59.805 38.462 0.00 0.00 41.60 2.32
5509 12173 7.029563 GGCTAAAAGATCAAACGATCAATTGT 58.970 34.615 5.13 0.00 41.60 2.71
5510 12174 7.542130 GGCTAAAAGATCAAACGATCAATTGTT 59.458 33.333 5.13 0.00 41.60 2.83
5511 12175 8.368126 GCTAAAAGATCAAACGATCAATTGTTG 58.632 33.333 5.13 2.45 41.60 3.33
5512 12176 9.398170 CTAAAAGATCAAACGATCAATTGTTGT 57.602 29.630 5.13 0.55 41.60 3.32
5513 12177 7.627585 AAAGATCAAACGATCAATTGTTGTG 57.372 32.000 5.13 0.00 41.60 3.33
5514 12178 6.317789 AGATCAAACGATCAATTGTTGTGT 57.682 33.333 5.13 0.00 41.60 3.72
5515 12179 6.373779 AGATCAAACGATCAATTGTTGTGTC 58.626 36.000 5.13 5.80 41.60 3.67
5516 12180 5.749596 TCAAACGATCAATTGTTGTGTCT 57.250 34.783 5.13 0.00 34.71 3.41
5517 12181 5.747565 TCAAACGATCAATTGTTGTGTCTC 58.252 37.500 5.13 0.00 34.71 3.36
5518 12182 5.527214 TCAAACGATCAATTGTTGTGTCTCT 59.473 36.000 5.13 0.00 34.71 3.10
5519 12183 6.704050 TCAAACGATCAATTGTTGTGTCTCTA 59.296 34.615 5.13 0.00 34.71 2.43
5520 12184 6.712241 AACGATCAATTGTTGTGTCTCTAG 57.288 37.500 5.13 0.00 33.27 2.43
5521 12185 5.171476 ACGATCAATTGTTGTGTCTCTAGG 58.829 41.667 5.13 0.00 0.00 3.02
5522 12186 4.568359 CGATCAATTGTTGTGTCTCTAGGG 59.432 45.833 5.13 0.00 0.00 3.53
5523 12187 4.974645 TCAATTGTTGTGTCTCTAGGGT 57.025 40.909 5.13 0.00 0.00 4.34
5524 12188 4.641396 TCAATTGTTGTGTCTCTAGGGTG 58.359 43.478 5.13 0.00 0.00 4.61
5525 12189 2.543777 TTGTTGTGTCTCTAGGGTGC 57.456 50.000 0.00 0.00 0.00 5.01
5526 12190 0.685097 TGTTGTGTCTCTAGGGTGCC 59.315 55.000 0.00 0.00 0.00 5.01
5527 12191 0.036294 GTTGTGTCTCTAGGGTGCCC 60.036 60.000 0.00 0.00 0.00 5.36
5528 12192 1.198759 TTGTGTCTCTAGGGTGCCCC 61.199 60.000 3.17 2.16 45.90 5.80
5540 12204 4.500826 TGCCCCTGCCCCCGTATA 62.501 66.667 0.00 0.00 36.33 1.47
5541 12205 2.933834 GCCCCTGCCCCCGTATAT 60.934 66.667 0.00 0.00 0.00 0.86
5542 12206 1.614226 GCCCCTGCCCCCGTATATA 60.614 63.158 0.00 0.00 0.00 0.86
5543 12207 1.623542 GCCCCTGCCCCCGTATATAG 61.624 65.000 0.00 0.00 0.00 1.31
5544 12208 0.042131 CCCCTGCCCCCGTATATAGA 59.958 60.000 0.00 0.00 0.00 1.98
5545 12209 1.486211 CCCTGCCCCCGTATATAGAG 58.514 60.000 0.00 0.00 0.00 2.43
5546 12210 1.486211 CCTGCCCCCGTATATAGAGG 58.514 60.000 0.00 0.00 0.00 3.69
5547 12211 1.006758 CCTGCCCCCGTATATAGAGGA 59.993 57.143 5.90 0.00 0.00 3.71
5548 12212 2.379972 CTGCCCCCGTATATAGAGGAG 58.620 57.143 5.90 0.00 0.00 3.69
5549 12213 1.112950 GCCCCCGTATATAGAGGAGC 58.887 60.000 5.90 5.13 0.00 4.70
5550 12214 1.618888 GCCCCCGTATATAGAGGAGCA 60.619 57.143 5.90 0.00 0.00 4.26
5551 12215 2.816411 CCCCCGTATATAGAGGAGCAA 58.184 52.381 5.90 0.00 0.00 3.91
5552 12216 2.761208 CCCCCGTATATAGAGGAGCAAG 59.239 54.545 5.90 0.00 0.00 4.01
5553 12217 2.761208 CCCCGTATATAGAGGAGCAAGG 59.239 54.545 5.90 0.00 0.00 3.61
5554 12218 2.761208 CCCGTATATAGAGGAGCAAGGG 59.239 54.545 5.90 0.00 0.00 3.95
5555 12219 2.761208 CCGTATATAGAGGAGCAAGGGG 59.239 54.545 0.00 0.00 0.00 4.79
5556 12220 2.761208 CGTATATAGAGGAGCAAGGGGG 59.239 54.545 0.00 0.00 0.00 5.40
5557 12221 3.563697 CGTATATAGAGGAGCAAGGGGGA 60.564 52.174 0.00 0.00 0.00 4.81
5558 12222 2.704190 TATAGAGGAGCAAGGGGGAG 57.296 55.000 0.00 0.00 0.00 4.30
5559 12223 0.944999 ATAGAGGAGCAAGGGGGAGA 59.055 55.000 0.00 0.00 0.00 3.71
5560 12224 0.263172 TAGAGGAGCAAGGGGGAGAG 59.737 60.000 0.00 0.00 0.00 3.20
5561 12225 2.041928 AGGAGCAAGGGGGAGAGG 59.958 66.667 0.00 0.00 0.00 3.69
5562 12226 2.285743 GGAGCAAGGGGGAGAGGT 60.286 66.667 0.00 0.00 0.00 3.85
5563 12227 2.674220 GGAGCAAGGGGGAGAGGTG 61.674 68.421 0.00 0.00 0.00 4.00
5564 12228 3.334054 AGCAAGGGGGAGAGGTGC 61.334 66.667 0.00 0.00 35.41 5.01
5565 12229 4.785453 GCAAGGGGGAGAGGTGCG 62.785 72.222 0.00 0.00 0.00 5.34
5566 12230 4.101448 CAAGGGGGAGAGGTGCGG 62.101 72.222 0.00 0.00 0.00 5.69
5591 12255 4.785453 GAAGGGGCACGCCAGGAG 62.785 72.222 10.83 0.00 44.92 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 2.548904 CACAAAACCGAATAACCCGACA 59.451 45.455 0.00 0.00 0.00 4.35
68 69 1.123077 ATGATCCTAGCCTCAACGCA 58.877 50.000 0.00 0.00 0.00 5.24
83 84 5.901853 TCTCTGAGTGATTCTAACCCATGAT 59.098 40.000 4.32 0.00 0.00 2.45
155 159 1.708551 TGGGTTGGCCTAGCTAGTTTT 59.291 47.619 19.31 0.00 34.45 2.43
156 160 1.282157 CTGGGTTGGCCTAGCTAGTTT 59.718 52.381 18.97 0.00 36.55 2.66
157 161 0.912486 CTGGGTTGGCCTAGCTAGTT 59.088 55.000 18.97 0.00 36.55 2.24
158 162 2.609046 CTGGGTTGGCCTAGCTAGT 58.391 57.895 18.97 0.00 36.55 2.57
252 256 6.978659 CAGTTCAAATAATAGGAGCGTGTCTA 59.021 38.462 0.00 0.00 0.00 2.59
273 277 1.040339 TTTGAGGGGTTTGCGCAGTT 61.040 50.000 11.31 0.00 0.00 3.16
277 281 2.734276 TATTTTTGAGGGGTTTGCGC 57.266 45.000 0.00 0.00 0.00 6.09
303 307 1.282653 TGGAATGTCCCCCGGCATAA 61.283 55.000 0.00 0.00 35.03 1.90
351 357 0.919710 AACTGGATTAGAGGGTGGGC 59.080 55.000 0.00 0.00 0.00 5.36
403 409 1.149627 CCGTGTTCTTTGGGGGACA 59.850 57.895 0.00 0.00 0.00 4.02
431 437 6.721704 AAGATTCTTTTCCCTTATGCATCC 57.278 37.500 0.19 0.00 0.00 3.51
576 582 3.501062 GGGGTGCTATCGCCTTTTATTAC 59.499 47.826 0.00 0.00 42.48 1.89
801 809 2.427453 GAGAGGAGACGCCATCTGTTTA 59.573 50.000 0.00 0.00 38.00 2.01
1068 1183 1.548269 AGGCGAGAAGAGACCAAGAAG 59.452 52.381 0.00 0.00 0.00 2.85
1631 1832 5.805728 AGCTTGGCAAAACTACATAGTACT 58.194 37.500 0.00 0.00 34.99 2.73
1632 1833 6.496338 AAGCTTGGCAAAACTACATAGTAC 57.504 37.500 0.00 0.00 34.99 2.73
1635 1836 7.485913 CACAATAAGCTTGGCAAAACTACATAG 59.514 37.037 9.86 0.00 0.00 2.23
1656 1890 7.933577 TGTGACTAGAAATTTCTCTGACACAAT 59.066 33.333 31.25 9.85 40.02 2.71
1960 4379 4.022589 CAGTCACATGTGGCAAGAAAGATT 60.023 41.667 30.70 5.21 37.73 2.40
2284 8752 8.956426 AGTTTGAAGTTGACATTCTCAGTAAAA 58.044 29.630 0.00 0.00 0.00 1.52
2285 8753 8.506168 AGTTTGAAGTTGACATTCTCAGTAAA 57.494 30.769 0.00 0.00 0.00 2.01
2565 9061 1.707427 AGCAGAGACTCCCATTGGTTT 59.293 47.619 1.20 0.00 0.00 3.27
2750 9246 4.536489 ACTTAACAACCTTAGAGGCTCCAT 59.464 41.667 11.71 0.00 39.63 3.41
2939 9435 8.902540 ACATCTACAAGAAACAATTGACACTA 57.097 30.769 13.59 0.00 0.00 2.74
2945 9441 6.147821 AGGACGACATCTACAAGAAACAATTG 59.852 38.462 3.24 3.24 0.00 2.32
2948 9444 5.209818 AGGACGACATCTACAAGAAACAA 57.790 39.130 0.00 0.00 0.00 2.83
3368 9892 3.815401 CCCTGGCATAGATAAAGAAACCG 59.185 47.826 0.00 0.00 0.00 4.44
3554 10078 8.486210 AGCAGTGATAGATAAGTGGTTCATTAA 58.514 33.333 0.00 0.00 0.00 1.40
3888 10514 9.221775 GAAATTAATCCAGTGTTTTATAGCACG 57.778 33.333 0.00 0.00 40.26 5.34
3944 10575 5.888161 GGATCAGTCAATTTGTCCACCTATT 59.112 40.000 0.00 0.00 0.00 1.73
3948 10579 3.420893 TGGATCAGTCAATTTGTCCACC 58.579 45.455 0.00 0.00 31.24 4.61
3949 10580 6.949352 ATATGGATCAGTCAATTTGTCCAC 57.051 37.500 7.59 0.00 38.45 4.02
3950 10581 7.774134 CAAATATGGATCAGTCAATTTGTCCA 58.226 34.615 7.81 7.81 39.79 4.02
3952 10583 7.417116 AGCCAAATATGGATCAGTCAATTTGTC 60.417 37.037 0.00 0.00 43.38 3.18
3984 10615 9.965902 ACTCTAGTTATGGATCAGTCAATTTTT 57.034 29.630 0.00 0.00 0.00 1.94
4044 10675 2.372852 GTGGCAACTCCCTCCACTA 58.627 57.895 3.59 0.00 45.04 2.74
4379 11013 3.098636 GTGTTCAACGTTCTTGAAGCAC 58.901 45.455 0.00 7.88 38.88 4.40
4617 11279 5.769662 TGATCACATCAGCTAAAACTTTGGT 59.230 36.000 0.00 0.00 33.59 3.67
4631 11294 5.280164 GCACCCCTAATCTATGATCACATCA 60.280 44.000 0.00 0.00 44.55 3.07
4835 11498 6.845302 TGTCTGCACAATTACATTTCTCATC 58.155 36.000 0.00 0.00 0.00 2.92
4890 11553 5.633182 ACGACAACATAAATTGCCATGAAAC 59.367 36.000 0.00 0.00 32.47 2.78
5015 11679 2.857186 TGGTATGCCATCATGCGTAT 57.143 45.000 0.00 0.00 40.46 3.06
5134 11798 2.325509 GCGTGTGCGTAGGAATTTTT 57.674 45.000 0.00 0.00 40.81 1.94
5146 11810 0.179181 CACCATGATCTTGCGTGTGC 60.179 55.000 15.81 0.00 43.20 4.57
5147 11811 1.441738 TCACCATGATCTTGCGTGTG 58.558 50.000 19.89 14.96 0.00 3.82
5148 11812 2.011947 CATCACCATGATCTTGCGTGT 58.988 47.619 19.89 6.63 34.28 4.49
5149 11813 1.268386 GCATCACCATGATCTTGCGTG 60.268 52.381 17.02 17.02 34.28 5.34
5150 11814 1.019673 GCATCACCATGATCTTGCGT 58.980 50.000 3.07 0.87 34.28 5.24
5151 11815 1.018910 TGCATCACCATGATCTTGCG 58.981 50.000 3.07 0.30 34.28 4.85
5152 11816 3.366070 GCTATGCATCACCATGATCTTGC 60.366 47.826 0.19 0.00 34.28 4.01
5153 11817 3.818773 TGCTATGCATCACCATGATCTTG 59.181 43.478 0.19 1.60 34.28 3.02
5154 11818 4.094830 TGCTATGCATCACCATGATCTT 57.905 40.909 0.19 0.00 34.28 2.40
5155 11819 3.782656 TGCTATGCATCACCATGATCT 57.217 42.857 0.19 0.00 34.28 2.75
5156 11820 3.364664 CGTTGCTATGCATCACCATGATC 60.365 47.826 0.19 0.00 38.76 2.92
5157 11821 2.551032 CGTTGCTATGCATCACCATGAT 59.449 45.455 0.19 0.00 38.76 2.45
5158 11822 1.941975 CGTTGCTATGCATCACCATGA 59.058 47.619 0.19 0.00 38.76 3.07
5159 11823 1.941975 TCGTTGCTATGCATCACCATG 59.058 47.619 0.19 0.00 38.76 3.66
5160 11824 2.158914 TCTCGTTGCTATGCATCACCAT 60.159 45.455 0.19 0.00 38.76 3.55
5161 11825 1.206849 TCTCGTTGCTATGCATCACCA 59.793 47.619 0.19 0.00 38.76 4.17
5162 11826 1.863454 CTCTCGTTGCTATGCATCACC 59.137 52.381 0.19 0.00 38.76 4.02
5163 11827 1.863454 CCTCTCGTTGCTATGCATCAC 59.137 52.381 0.19 0.00 38.76 3.06
5164 11828 1.202568 CCCTCTCGTTGCTATGCATCA 60.203 52.381 0.19 0.00 38.76 3.07
5165 11829 1.506493 CCCTCTCGTTGCTATGCATC 58.494 55.000 0.19 0.00 38.76 3.91
5166 11830 0.107456 CCCCTCTCGTTGCTATGCAT 59.893 55.000 3.79 3.79 38.76 3.96
5167 11831 1.264749 ACCCCTCTCGTTGCTATGCA 61.265 55.000 0.00 0.00 36.47 3.96
5168 11832 0.811616 CACCCCTCTCGTTGCTATGC 60.812 60.000 0.00 0.00 0.00 3.14
5169 11833 0.824109 TCACCCCTCTCGTTGCTATG 59.176 55.000 0.00 0.00 0.00 2.23
5170 11834 1.115467 CTCACCCCTCTCGTTGCTAT 58.885 55.000 0.00 0.00 0.00 2.97
5171 11835 0.251653 ACTCACCCCTCTCGTTGCTA 60.252 55.000 0.00 0.00 0.00 3.49
5172 11836 1.534235 ACTCACCCCTCTCGTTGCT 60.534 57.895 0.00 0.00 0.00 3.91
5173 11837 1.374758 CACTCACCCCTCTCGTTGC 60.375 63.158 0.00 0.00 0.00 4.17
5174 11838 0.393077 AACACTCACCCCTCTCGTTG 59.607 55.000 0.00 0.00 0.00 4.10
5175 11839 0.393077 CAACACTCACCCCTCTCGTT 59.607 55.000 0.00 0.00 0.00 3.85
5176 11840 0.759436 ACAACACTCACCCCTCTCGT 60.759 55.000 0.00 0.00 0.00 4.18
5177 11841 0.038159 GACAACACTCACCCCTCTCG 60.038 60.000 0.00 0.00 0.00 4.04
5178 11842 0.321996 GGACAACACTCACCCCTCTC 59.678 60.000 0.00 0.00 0.00 3.20
5179 11843 0.399949 TGGACAACACTCACCCCTCT 60.400 55.000 0.00 0.00 0.00 3.69
5180 11844 0.250338 GTGGACAACACTCACCCCTC 60.250 60.000 0.00 0.00 46.72 4.30
5181 11845 1.837090 GTGGACAACACTCACCCCT 59.163 57.895 0.00 0.00 46.72 4.79
5182 11846 4.475527 GTGGACAACACTCACCCC 57.524 61.111 0.00 0.00 46.72 4.95
5189 11853 0.665369 CGAGGGTACGTGGACAACAC 60.665 60.000 0.00 0.00 46.78 3.32
5190 11854 1.108727 ACGAGGGTACGTGGACAACA 61.109 55.000 0.00 0.00 44.84 3.33
5191 11855 0.881118 TACGAGGGTACGTGGACAAC 59.119 55.000 0.00 0.00 46.02 3.32
5192 11856 1.167851 CTACGAGGGTACGTGGACAA 58.832 55.000 0.00 0.00 44.98 3.18
5193 11857 0.324614 TCTACGAGGGTACGTGGACA 59.675 55.000 0.00 0.00 45.53 4.02
5194 11858 3.159298 TCTACGAGGGTACGTGGAC 57.841 57.895 0.00 0.00 45.53 4.02
5196 11860 2.101700 GGTCTACGAGGGTACGTGG 58.898 63.158 0.00 0.00 46.02 4.94
5205 11869 3.296057 GCTTCTGCTTTCGGTCTACGAG 61.296 54.545 0.00 0.00 43.96 4.18
5206 11870 1.402456 GCTTCTGCTTTCGGTCTACGA 60.402 52.381 0.00 0.00 42.56 3.43
5207 11871 0.992802 GCTTCTGCTTTCGGTCTACG 59.007 55.000 0.00 0.00 39.13 3.51
5208 11872 0.992802 CGCTTCTGCTTTCGGTCTAC 59.007 55.000 0.00 0.00 36.97 2.59
5209 11873 0.601558 ACGCTTCTGCTTTCGGTCTA 59.398 50.000 0.00 0.00 36.97 2.59
5210 11874 0.249911 AACGCTTCTGCTTTCGGTCT 60.250 50.000 0.00 0.00 36.97 3.85
5211 11875 1.390463 CTAACGCTTCTGCTTTCGGTC 59.610 52.381 0.00 0.00 36.97 4.79
5212 11876 1.429463 CTAACGCTTCTGCTTTCGGT 58.571 50.000 0.00 0.00 36.97 4.69
5213 11877 0.095417 GCTAACGCTTCTGCTTTCGG 59.905 55.000 0.00 0.00 36.97 4.30
5214 11878 0.790207 TGCTAACGCTTCTGCTTTCG 59.210 50.000 0.00 0.00 36.97 3.46
5215 11879 1.531149 TGTGCTAACGCTTCTGCTTTC 59.469 47.619 0.00 0.00 36.97 2.62
5216 11880 1.593196 TGTGCTAACGCTTCTGCTTT 58.407 45.000 0.00 0.00 36.97 3.51
5217 11881 1.264288 GTTGTGCTAACGCTTCTGCTT 59.736 47.619 0.00 0.00 36.97 3.91
5218 11882 0.868406 GTTGTGCTAACGCTTCTGCT 59.132 50.000 0.00 0.00 36.97 4.24
5219 11883 0.451135 CGTTGTGCTAACGCTTCTGC 60.451 55.000 12.46 0.00 36.82 4.26
5220 11884 3.639222 CGTTGTGCTAACGCTTCTG 57.361 52.632 12.46 0.00 36.82 3.02
5226 11890 1.438059 CAACCGCGTTGTGCTAACG 60.438 57.895 18.25 18.25 45.56 3.18
5227 11891 0.515564 ATCAACCGCGTTGTGCTAAC 59.484 50.000 16.97 0.00 43.23 2.34
5228 11892 0.515127 CATCAACCGCGTTGTGCTAA 59.485 50.000 16.97 2.99 43.23 3.09
5229 11893 0.601576 ACATCAACCGCGTTGTGCTA 60.602 50.000 16.97 3.28 43.23 3.49
5230 11894 0.601576 TACATCAACCGCGTTGTGCT 60.602 50.000 16.97 6.88 43.23 4.40
5231 11895 0.179225 CTACATCAACCGCGTTGTGC 60.179 55.000 16.97 0.00 43.23 4.57
5232 11896 1.126113 GACTACATCAACCGCGTTGTG 59.874 52.381 16.97 15.92 43.23 3.33
5233 11897 1.425412 GACTACATCAACCGCGTTGT 58.575 50.000 16.97 9.99 43.23 3.32
5234 11898 0.365523 CGACTACATCAACCGCGTTG 59.634 55.000 4.92 10.14 43.99 4.10
5235 11899 0.038892 ACGACTACATCAACCGCGTT 60.039 50.000 4.92 0.00 0.00 4.84
5236 11900 0.804364 TACGACTACATCAACCGCGT 59.196 50.000 4.92 0.00 0.00 6.01
5237 11901 1.186030 GTACGACTACATCAACCGCG 58.814 55.000 0.00 0.00 0.00 6.46
5238 11902 2.267188 TGTACGACTACATCAACCGC 57.733 50.000 0.00 0.00 0.00 5.68
5252 11916 2.373269 GTCGGATCGTGAAGATGTACG 58.627 52.381 0.00 0.00 40.26 3.67
5253 11917 2.728922 GGTCGGATCGTGAAGATGTAC 58.271 52.381 0.00 0.00 40.26 2.90
5254 11918 1.332686 CGGTCGGATCGTGAAGATGTA 59.667 52.381 1.71 0.00 40.26 2.29
5255 11919 0.100682 CGGTCGGATCGTGAAGATGT 59.899 55.000 1.71 0.00 40.26 3.06
5256 11920 0.380733 TCGGTCGGATCGTGAAGATG 59.619 55.000 10.85 0.00 40.26 2.90
5257 11921 1.267261 GATCGGTCGGATCGTGAAGAT 59.733 52.381 10.85 0.00 42.02 2.40
5258 11922 0.661552 GATCGGTCGGATCGTGAAGA 59.338 55.000 10.85 0.00 42.02 2.87
5259 11923 3.165559 GATCGGTCGGATCGTGAAG 57.834 57.895 10.85 0.00 42.02 3.02
5274 11938 1.517276 CCGTGCGTTCGATACTTGATC 59.483 52.381 0.00 0.00 0.00 2.92
5275 11939 1.556564 CCGTGCGTTCGATACTTGAT 58.443 50.000 0.00 0.00 0.00 2.57
5276 11940 1.074319 GCCGTGCGTTCGATACTTGA 61.074 55.000 0.00 0.00 0.00 3.02
5277 11941 1.343821 GCCGTGCGTTCGATACTTG 59.656 57.895 0.00 0.00 0.00 3.16
5278 11942 1.080366 TGCCGTGCGTTCGATACTT 60.080 52.632 0.00 0.00 0.00 2.24
5279 11943 1.804326 GTGCCGTGCGTTCGATACT 60.804 57.895 0.00 0.00 0.00 2.12
5280 11944 2.693285 GTGCCGTGCGTTCGATAC 59.307 61.111 0.00 0.00 0.00 2.24
5281 11945 2.507547 GGTGCCGTGCGTTCGATA 60.508 61.111 0.00 0.00 0.00 2.92
5282 11946 4.373116 AGGTGCCGTGCGTTCGAT 62.373 61.111 0.00 0.00 0.00 3.59
5293 11957 2.435059 GCTGAACTCGGAGGTGCC 60.435 66.667 10.23 0.00 0.00 5.01
5294 11958 2.029844 GTGCTGAACTCGGAGGTGC 61.030 63.158 10.23 4.15 0.00 5.01
5295 11959 0.946221 GTGTGCTGAACTCGGAGGTG 60.946 60.000 10.23 0.00 0.00 4.00
5296 11960 1.367840 GTGTGCTGAACTCGGAGGT 59.632 57.895 10.23 1.51 0.00 3.85
5297 11961 1.734477 CGTGTGCTGAACTCGGAGG 60.734 63.158 10.23 0.00 41.05 4.30
5298 11962 3.848142 CGTGTGCTGAACTCGGAG 58.152 61.111 2.83 2.83 41.05 4.63
5302 11966 0.233332 GCTGAACGTGTGCTGAACTC 59.767 55.000 0.00 0.00 0.00 3.01
5303 11967 1.160329 GGCTGAACGTGTGCTGAACT 61.160 55.000 0.00 0.00 0.00 3.01
5304 11968 1.279840 GGCTGAACGTGTGCTGAAC 59.720 57.895 0.00 0.00 0.00 3.18
5305 11969 1.891919 GGGCTGAACGTGTGCTGAA 60.892 57.895 0.00 0.00 0.00 3.02
5306 11970 2.280797 GGGCTGAACGTGTGCTGA 60.281 61.111 0.00 0.00 0.00 4.26
5307 11971 3.716006 CGGGCTGAACGTGTGCTG 61.716 66.667 0.00 0.00 0.00 4.41
5308 11972 3.240134 ATCGGGCTGAACGTGTGCT 62.240 57.895 0.00 0.00 0.00 4.40
5309 11973 2.742372 ATCGGGCTGAACGTGTGC 60.742 61.111 0.00 0.00 0.00 4.57
5310 11974 1.374125 TCATCGGGCTGAACGTGTG 60.374 57.895 0.00 0.00 0.00 3.82
5311 11975 1.374252 GTCATCGGGCTGAACGTGT 60.374 57.895 0.00 0.00 0.00 4.49
5312 11976 2.444624 CGTCATCGGGCTGAACGTG 61.445 63.158 11.46 1.10 0.00 4.49
5313 11977 2.126071 CGTCATCGGGCTGAACGT 60.126 61.111 11.46 0.00 0.00 3.99
5314 11978 2.126071 ACGTCATCGGGCTGAACG 60.126 61.111 16.73 16.73 41.85 3.95
5315 11979 1.810030 GGACGTCATCGGGCTGAAC 60.810 63.158 18.91 0.00 41.85 3.18
5316 11980 2.577059 GGACGTCATCGGGCTGAA 59.423 61.111 18.91 0.00 41.85 3.02
5317 11981 3.458163 GGGACGTCATCGGGCTGA 61.458 66.667 18.91 0.00 41.85 4.26
5318 11982 3.432051 GAGGGACGTCATCGGGCTG 62.432 68.421 18.91 0.00 41.85 4.85
5319 11983 3.148279 GAGGGACGTCATCGGGCT 61.148 66.667 18.91 0.00 41.85 5.19
5320 11984 4.570663 CGAGGGACGTCATCGGGC 62.571 72.222 25.96 6.61 41.85 6.13
5321 11985 2.412323 TTCGAGGGACGTCATCGGG 61.412 63.158 30.05 14.93 43.13 5.14
5322 11986 1.226603 GTTCGAGGGACGTCATCGG 60.227 63.158 30.05 17.92 43.13 4.18
5323 11987 0.248134 GAGTTCGAGGGACGTCATCG 60.248 60.000 27.08 27.08 43.13 3.84
5324 11988 0.100861 GGAGTTCGAGGGACGTCATC 59.899 60.000 18.91 13.48 43.13 2.92
5325 11989 1.654954 CGGAGTTCGAGGGACGTCAT 61.655 60.000 18.91 4.87 42.43 3.06
5326 11990 2.330372 CGGAGTTCGAGGGACGTCA 61.330 63.158 18.91 0.00 42.43 4.35
5327 11991 2.037136 TCGGAGTTCGAGGGACGTC 61.037 63.158 7.13 7.13 43.74 4.34
5328 11992 2.033141 TCGGAGTTCGAGGGACGT 59.967 61.111 0.00 0.00 43.74 4.34
5336 12000 2.278857 CGGCTGGATCGGAGTTCG 60.279 66.667 0.00 0.00 40.90 3.95
5337 12001 1.066587 CTCGGCTGGATCGGAGTTC 59.933 63.158 0.00 0.00 0.00 3.01
5338 12002 1.682684 ACTCGGCTGGATCGGAGTT 60.683 57.895 0.00 0.00 41.80 3.01
5339 12003 2.043852 ACTCGGCTGGATCGGAGT 60.044 61.111 0.00 0.00 40.39 3.85
5340 12004 1.949847 AACACTCGGCTGGATCGGAG 61.950 60.000 0.00 0.00 38.77 4.63
5341 12005 1.982395 AACACTCGGCTGGATCGGA 60.982 57.895 0.00 0.00 0.00 4.55
5342 12006 1.811266 CAACACTCGGCTGGATCGG 60.811 63.158 0.00 0.00 0.00 4.18
5343 12007 0.803768 CTCAACACTCGGCTGGATCG 60.804 60.000 0.00 0.00 0.00 3.69
5344 12008 0.460987 CCTCAACACTCGGCTGGATC 60.461 60.000 0.00 0.00 0.00 3.36
5345 12009 1.599047 CCTCAACACTCGGCTGGAT 59.401 57.895 0.00 0.00 0.00 3.41
5346 12010 2.583441 CCCTCAACACTCGGCTGGA 61.583 63.158 0.00 0.00 0.00 3.86
5347 12011 2.046892 CCCTCAACACTCGGCTGG 60.047 66.667 0.00 0.00 0.00 4.85
5348 12012 1.079543 CTCCCTCAACACTCGGCTG 60.080 63.158 0.00 0.00 0.00 4.85
5349 12013 1.228894 TCTCCCTCAACACTCGGCT 60.229 57.895 0.00 0.00 0.00 5.52
5350 12014 1.216710 CTCTCCCTCAACACTCGGC 59.783 63.158 0.00 0.00 0.00 5.54
5351 12015 0.969894 AACTCTCCCTCAACACTCGG 59.030 55.000 0.00 0.00 0.00 4.63
5352 12016 2.678324 GAAACTCTCCCTCAACACTCG 58.322 52.381 0.00 0.00 0.00 4.18
5353 12017 2.036089 ACGAAACTCTCCCTCAACACTC 59.964 50.000 0.00 0.00 0.00 3.51
5354 12018 2.036089 GACGAAACTCTCCCTCAACACT 59.964 50.000 0.00 0.00 0.00 3.55
5355 12019 2.223971 TGACGAAACTCTCCCTCAACAC 60.224 50.000 0.00 0.00 0.00 3.32
5356 12020 2.035961 CTGACGAAACTCTCCCTCAACA 59.964 50.000 0.00 0.00 0.00 3.33
5357 12021 2.678324 CTGACGAAACTCTCCCTCAAC 58.322 52.381 0.00 0.00 0.00 3.18
5358 12022 1.000955 GCTGACGAAACTCTCCCTCAA 59.999 52.381 0.00 0.00 0.00 3.02
5359 12023 0.603569 GCTGACGAAACTCTCCCTCA 59.396 55.000 0.00 0.00 0.00 3.86
5360 12024 0.603569 TGCTGACGAAACTCTCCCTC 59.396 55.000 0.00 0.00 0.00 4.30
5361 12025 0.318762 GTGCTGACGAAACTCTCCCT 59.681 55.000 0.00 0.00 0.00 4.20
5362 12026 2.828933 GTGCTGACGAAACTCTCCC 58.171 57.895 0.00 0.00 0.00 4.30
5380 12044 4.771356 ATCGTCACCACGCCGTCG 62.771 66.667 0.00 0.00 46.28 5.12
5381 12045 2.884087 ATCATCGTCACCACGCCGTC 62.884 60.000 0.00 0.00 46.28 4.79
5382 12046 3.001902 ATCATCGTCACCACGCCGT 62.002 57.895 0.00 0.00 46.28 5.68
5383 12047 2.202743 ATCATCGTCACCACGCCG 60.203 61.111 0.00 0.00 46.28 6.46
5384 12048 0.530650 ATCATCATCGTCACCACGCC 60.531 55.000 0.00 0.00 46.28 5.68
5385 12049 0.578683 CATCATCATCGTCACCACGC 59.421 55.000 0.00 0.00 46.28 5.34
5387 12051 3.525537 AGAACATCATCATCGTCACCAC 58.474 45.455 0.00 0.00 0.00 4.16
5388 12052 3.893326 AGAACATCATCATCGTCACCA 57.107 42.857 0.00 0.00 0.00 4.17
5389 12053 4.051922 GGTAGAACATCATCATCGTCACC 58.948 47.826 0.00 0.00 0.00 4.02
5390 12054 4.682787 TGGTAGAACATCATCATCGTCAC 58.317 43.478 0.00 0.00 0.00 3.67
5391 12055 5.109210 GTTGGTAGAACATCATCATCGTCA 58.891 41.667 0.00 0.00 0.00 4.35
5392 12056 4.207224 CGTTGGTAGAACATCATCATCGTC 59.793 45.833 0.00 0.00 0.00 4.20
5393 12057 4.112634 CGTTGGTAGAACATCATCATCGT 58.887 43.478 0.00 0.00 0.00 3.73
5394 12058 3.060272 GCGTTGGTAGAACATCATCATCG 60.060 47.826 0.00 0.00 0.00 3.84
5395 12059 3.871006 TGCGTTGGTAGAACATCATCATC 59.129 43.478 0.00 0.00 0.00 2.92
5396 12060 3.872696 TGCGTTGGTAGAACATCATCAT 58.127 40.909 0.00 0.00 0.00 2.45
5397 12061 3.261580 CTGCGTTGGTAGAACATCATCA 58.738 45.455 0.00 0.00 0.00 3.07
5398 12062 2.609459 CCTGCGTTGGTAGAACATCATC 59.391 50.000 0.00 0.00 0.00 2.92
5399 12063 2.632377 CCTGCGTTGGTAGAACATCAT 58.368 47.619 0.00 0.00 0.00 2.45
5400 12064 1.338674 CCCTGCGTTGGTAGAACATCA 60.339 52.381 0.00 0.00 0.00 3.07
5401 12065 1.369625 CCCTGCGTTGGTAGAACATC 58.630 55.000 0.00 0.00 0.00 3.06
5402 12066 0.676782 GCCCTGCGTTGGTAGAACAT 60.677 55.000 0.00 0.00 0.00 2.71
5403 12067 1.302192 GCCCTGCGTTGGTAGAACA 60.302 57.895 0.00 0.00 0.00 3.18
5404 12068 0.605589 AAGCCCTGCGTTGGTAGAAC 60.606 55.000 0.00 0.00 0.00 3.01
5405 12069 0.321298 GAAGCCCTGCGTTGGTAGAA 60.321 55.000 0.00 0.00 0.00 2.10
5406 12070 1.295423 GAAGCCCTGCGTTGGTAGA 59.705 57.895 0.00 0.00 0.00 2.59
5407 12071 2.100631 CGAAGCCCTGCGTTGGTAG 61.101 63.158 0.00 0.00 0.00 3.18
5408 12072 2.047655 CGAAGCCCTGCGTTGGTA 60.048 61.111 0.00 0.00 0.00 3.25
5421 12085 1.141019 TAGCGGTGCTTAGGCGAAG 59.859 57.895 2.68 2.68 40.44 3.79
5422 12086 1.153706 GTAGCGGTGCTTAGGCGAA 60.154 57.895 0.00 0.00 40.44 4.70
5423 12087 2.279502 CTGTAGCGGTGCTTAGGCGA 62.280 60.000 3.95 0.00 40.44 5.54
5424 12088 1.878522 CTGTAGCGGTGCTTAGGCG 60.879 63.158 3.95 0.00 40.44 5.52
5425 12089 0.458669 TACTGTAGCGGTGCTTAGGC 59.541 55.000 3.95 0.00 40.44 3.93
5426 12090 3.454371 AATACTGTAGCGGTGCTTAGG 57.546 47.619 3.95 0.00 40.44 2.69
5427 12091 4.852104 CGATAATACTGTAGCGGTGCTTAG 59.148 45.833 3.95 0.00 40.44 2.18
5428 12092 4.516321 TCGATAATACTGTAGCGGTGCTTA 59.484 41.667 3.95 0.00 40.44 3.09
5429 12093 3.317149 TCGATAATACTGTAGCGGTGCTT 59.683 43.478 3.95 0.00 40.44 3.91
5430 12094 2.882761 TCGATAATACTGTAGCGGTGCT 59.117 45.455 3.95 0.00 43.41 4.40
5431 12095 3.235195 CTCGATAATACTGTAGCGGTGC 58.765 50.000 0.00 0.00 33.79 5.01
5432 12096 3.252701 ACCTCGATAATACTGTAGCGGTG 59.747 47.826 0.00 0.00 33.79 4.94
5433 12097 3.252701 CACCTCGATAATACTGTAGCGGT 59.747 47.826 0.00 0.00 33.79 5.68
5434 12098 3.366070 CCACCTCGATAATACTGTAGCGG 60.366 52.174 0.00 0.00 33.79 5.52
5435 12099 3.501062 TCCACCTCGATAATACTGTAGCG 59.499 47.826 0.00 0.00 34.27 4.26
5436 12100 4.519730 AGTCCACCTCGATAATACTGTAGC 59.480 45.833 0.00 0.00 0.00 3.58
5437 12101 7.148222 CCATAGTCCACCTCGATAATACTGTAG 60.148 44.444 0.00 0.00 0.00 2.74
5438 12102 6.657966 CCATAGTCCACCTCGATAATACTGTA 59.342 42.308 0.00 0.00 0.00 2.74
5439 12103 5.477291 CCATAGTCCACCTCGATAATACTGT 59.523 44.000 0.00 0.00 0.00 3.55
5440 12104 5.477291 ACCATAGTCCACCTCGATAATACTG 59.523 44.000 0.00 0.00 0.00 2.74
5441 12105 5.477291 CACCATAGTCCACCTCGATAATACT 59.523 44.000 0.00 0.00 0.00 2.12
5442 12106 5.336531 CCACCATAGTCCACCTCGATAATAC 60.337 48.000 0.00 0.00 0.00 1.89
5443 12107 4.770531 CCACCATAGTCCACCTCGATAATA 59.229 45.833 0.00 0.00 0.00 0.98
5444 12108 3.578716 CCACCATAGTCCACCTCGATAAT 59.421 47.826 0.00 0.00 0.00 1.28
5445 12109 2.963101 CCACCATAGTCCACCTCGATAA 59.037 50.000 0.00 0.00 0.00 1.75
5446 12110 2.176148 TCCACCATAGTCCACCTCGATA 59.824 50.000 0.00 0.00 0.00 2.92
5447 12111 1.063190 TCCACCATAGTCCACCTCGAT 60.063 52.381 0.00 0.00 0.00 3.59
5448 12112 0.333652 TCCACCATAGTCCACCTCGA 59.666 55.000 0.00 0.00 0.00 4.04
5449 12113 0.747255 CTCCACCATAGTCCACCTCG 59.253 60.000 0.00 0.00 0.00 4.63
5450 12114 2.035632 CTCTCCACCATAGTCCACCTC 58.964 57.143 0.00 0.00 0.00 3.85
5451 12115 1.343478 CCTCTCCACCATAGTCCACCT 60.343 57.143 0.00 0.00 0.00 4.00
5452 12116 1.123928 CCTCTCCACCATAGTCCACC 58.876 60.000 0.00 0.00 0.00 4.61
5453 12117 1.123928 CCCTCTCCACCATAGTCCAC 58.876 60.000 0.00 0.00 0.00 4.02
5454 12118 0.031111 CCCCTCTCCACCATAGTCCA 60.031 60.000 0.00 0.00 0.00 4.02
5455 12119 1.411651 GCCCCTCTCCACCATAGTCC 61.412 65.000 0.00 0.00 0.00 3.85
5456 12120 0.691078 TGCCCCTCTCCACCATAGTC 60.691 60.000 0.00 0.00 0.00 2.59
5457 12121 0.983378 GTGCCCCTCTCCACCATAGT 60.983 60.000 0.00 0.00 0.00 2.12
5458 12122 1.832912 GTGCCCCTCTCCACCATAG 59.167 63.158 0.00 0.00 0.00 2.23
5459 12123 4.066614 GTGCCCCTCTCCACCATA 57.933 61.111 0.00 0.00 0.00 2.74
5464 12128 3.993865 TATGCGGTGCCCCTCTCCA 62.994 63.158 0.00 0.00 0.00 3.86
5465 12129 3.161450 TATGCGGTGCCCCTCTCC 61.161 66.667 0.00 0.00 0.00 3.71
5466 12130 2.109181 GTATGCGGTGCCCCTCTC 59.891 66.667 0.00 0.00 0.00 3.20
5467 12131 3.849951 CGTATGCGGTGCCCCTCT 61.850 66.667 0.00 0.00 0.00 3.69
5478 12142 4.033587 TCGTTTGATCTTTTAGCCGTATGC 59.966 41.667 0.00 0.00 41.71 3.14
5479 12143 5.712217 TCGTTTGATCTTTTAGCCGTATG 57.288 39.130 0.00 0.00 0.00 2.39
5480 12144 6.526566 GATCGTTTGATCTTTTAGCCGTAT 57.473 37.500 0.00 0.00 46.22 3.06
5481 12145 5.961395 GATCGTTTGATCTTTTAGCCGTA 57.039 39.130 0.00 0.00 46.22 4.02
5482 12146 4.859629 GATCGTTTGATCTTTTAGCCGT 57.140 40.909 0.00 0.00 46.22 5.68
5493 12157 6.205464 AGAGACACAACAATTGATCGTTTGAT 59.795 34.615 13.59 0.34 37.60 2.57
5494 12158 5.527214 AGAGACACAACAATTGATCGTTTGA 59.473 36.000 13.59 0.00 0.00 2.69
5495 12159 5.751680 AGAGACACAACAATTGATCGTTTG 58.248 37.500 13.59 8.26 0.00 2.93
5496 12160 6.147821 CCTAGAGACACAACAATTGATCGTTT 59.852 38.462 13.59 0.00 0.00 3.60
5497 12161 5.639506 CCTAGAGACACAACAATTGATCGTT 59.360 40.000 13.59 0.00 0.00 3.85
5498 12162 5.171476 CCTAGAGACACAACAATTGATCGT 58.829 41.667 13.59 3.40 0.00 3.73
5499 12163 4.568359 CCCTAGAGACACAACAATTGATCG 59.432 45.833 13.59 2.22 0.00 3.69
5500 12164 5.352569 CACCCTAGAGACACAACAATTGATC 59.647 44.000 13.59 1.75 0.00 2.92
5501 12165 5.248640 CACCCTAGAGACACAACAATTGAT 58.751 41.667 13.59 0.00 0.00 2.57
5502 12166 4.641396 CACCCTAGAGACACAACAATTGA 58.359 43.478 13.59 0.00 0.00 2.57
5503 12167 3.189287 GCACCCTAGAGACACAACAATTG 59.811 47.826 3.24 3.24 0.00 2.32
5504 12168 3.412386 GCACCCTAGAGACACAACAATT 58.588 45.455 0.00 0.00 0.00 2.32
5505 12169 2.290323 GGCACCCTAGAGACACAACAAT 60.290 50.000 0.00 0.00 0.00 2.71
5506 12170 1.071699 GGCACCCTAGAGACACAACAA 59.928 52.381 0.00 0.00 0.00 2.83
5507 12171 0.685097 GGCACCCTAGAGACACAACA 59.315 55.000 0.00 0.00 0.00 3.33
5508 12172 3.534721 GGCACCCTAGAGACACAAC 57.465 57.895 0.00 0.00 0.00 3.32
5523 12187 2.404039 TATATACGGGGGCAGGGGCA 62.404 60.000 0.00 0.00 43.71 5.36
5524 12188 1.614226 TATATACGGGGGCAGGGGC 60.614 63.158 0.00 0.00 40.13 5.80
5525 12189 0.042131 TCTATATACGGGGGCAGGGG 59.958 60.000 0.00 0.00 0.00 4.79
5526 12190 1.486211 CTCTATATACGGGGGCAGGG 58.514 60.000 0.00 0.00 0.00 4.45
5527 12191 1.006758 TCCTCTATATACGGGGGCAGG 59.993 57.143 0.00 0.00 0.00 4.85
5528 12192 2.379972 CTCCTCTATATACGGGGGCAG 58.620 57.143 0.00 0.00 0.00 4.85
5529 12193 1.618888 GCTCCTCTATATACGGGGGCA 60.619 57.143 13.41 0.00 44.12 5.36
5530 12194 1.112950 GCTCCTCTATATACGGGGGC 58.887 60.000 5.61 5.61 38.20 5.80
5531 12195 2.526888 TGCTCCTCTATATACGGGGG 57.473 55.000 0.00 0.00 0.00 5.40
5532 12196 2.761208 CCTTGCTCCTCTATATACGGGG 59.239 54.545 0.00 0.00 0.00 5.73
5533 12197 2.761208 CCCTTGCTCCTCTATATACGGG 59.239 54.545 0.00 0.00 0.00 5.28
5534 12198 2.761208 CCCCTTGCTCCTCTATATACGG 59.239 54.545 0.00 0.00 0.00 4.02
5535 12199 2.761208 CCCCCTTGCTCCTCTATATACG 59.239 54.545 0.00 0.00 0.00 3.06
5536 12200 4.027437 CTCCCCCTTGCTCCTCTATATAC 58.973 52.174 0.00 0.00 0.00 1.47
5537 12201 3.929936 TCTCCCCCTTGCTCCTCTATATA 59.070 47.826 0.00 0.00 0.00 0.86
5538 12202 2.730254 TCTCCCCCTTGCTCCTCTATAT 59.270 50.000 0.00 0.00 0.00 0.86
5539 12203 2.110899 CTCTCCCCCTTGCTCCTCTATA 59.889 54.545 0.00 0.00 0.00 1.31
5540 12204 0.944999 TCTCCCCCTTGCTCCTCTAT 59.055 55.000 0.00 0.00 0.00 1.98
5541 12205 0.263172 CTCTCCCCCTTGCTCCTCTA 59.737 60.000 0.00 0.00 0.00 2.43
5542 12206 1.002792 CTCTCCCCCTTGCTCCTCT 59.997 63.158 0.00 0.00 0.00 3.69
5543 12207 2.069430 CCTCTCCCCCTTGCTCCTC 61.069 68.421 0.00 0.00 0.00 3.71
5544 12208 2.041928 CCTCTCCCCCTTGCTCCT 59.958 66.667 0.00 0.00 0.00 3.69
5545 12209 2.285743 ACCTCTCCCCCTTGCTCC 60.286 66.667 0.00 0.00 0.00 4.70
5546 12210 2.993853 CACCTCTCCCCCTTGCTC 59.006 66.667 0.00 0.00 0.00 4.26
5547 12211 3.334054 GCACCTCTCCCCCTTGCT 61.334 66.667 0.00 0.00 0.00 3.91
5548 12212 4.785453 CGCACCTCTCCCCCTTGC 62.785 72.222 0.00 0.00 0.00 4.01
5549 12213 4.101448 CCGCACCTCTCCCCCTTG 62.101 72.222 0.00 0.00 0.00 3.61
5574 12238 4.785453 CTCCTGGCGTGCCCCTTC 62.785 72.222 8.69 0.00 34.56 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.