Multiple sequence alignment - TraesCS1D01G045500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G045500 chr1D 100.000 5519 0 0 1 5519 24786707 24792225 0.000000e+00 10192.0
1 TraesCS1D01G045500 chr1D 83.528 1372 166 31 3591 4911 24935045 24936407 0.000000e+00 1227.0
2 TraesCS1D01G045500 chr1D 75.795 880 137 40 3840 4666 25104880 25105736 5.220000e-100 375.0
3 TraesCS1D01G045500 chr1D 82.025 395 59 7 2768 3159 24934156 24934541 5.330000e-85 326.0
4 TraesCS1D01G045500 chr1D 87.500 280 28 6 932 1205 25101320 25101598 3.210000e-82 316.0
5 TraesCS1D01G045500 chr1D 80.893 403 41 25 1361 1738 25101943 25102334 9.050000e-73 285.0
6 TraesCS1D01G045500 chr1D 89.848 197 20 0 996 1192 24929816 24930012 2.550000e-63 254.0
7 TraesCS1D01G045500 chr1D 76.056 426 68 23 2374 2769 24932901 24933322 2.030000e-44 191.0
8 TraesCS1D01G045500 chr1D 81.197 234 30 8 5278 5502 24937804 24938032 5.680000e-40 176.0
9 TraesCS1D01G045500 chr1D 77.523 218 31 15 1370 1584 24930181 24930383 1.260000e-21 115.0
10 TraesCS1D01G045500 chr1D 78.771 179 32 6 1000 1175 288082688 288082863 1.260000e-21 115.0
11 TraesCS1D01G045500 chr1B 87.215 2980 203 60 2336 5213 40197421 40200324 0.000000e+00 3229.0
12 TraesCS1D01G045500 chr1B 90.573 1432 80 20 899 2308 40195461 40196859 0.000000e+00 1845.0
13 TraesCS1D01G045500 chr1B 83.140 1376 157 41 3597 4911 40360992 40362353 0.000000e+00 1186.0
14 TraesCS1D01G045500 chr1B 81.664 589 84 10 4947 5519 40362547 40363127 8.370000e-128 468.0
15 TraesCS1D01G045500 chr1B 83.081 396 46 10 2768 3159 40360110 40360488 1.900000e-89 340.0
16 TraesCS1D01G045500 chr1B 88.364 275 23 8 932 1205 40386683 40386949 6.900000e-84 322.0
17 TraesCS1D01G045500 chr1B 87.449 247 15 6 1 247 40187045 40187275 2.530000e-68 270.0
18 TraesCS1D01G045500 chr1B 79.950 404 45 19 1361 1738 40387301 40387694 1.180000e-66 265.0
19 TraesCS1D01G045500 chr1B 89.848 197 20 0 996 1192 40330576 40330772 2.550000e-63 254.0
20 TraesCS1D01G045500 chr1B 89.286 196 21 0 997 1192 40355779 40355974 4.270000e-61 246.0
21 TraesCS1D01G045500 chr1B 94.268 157 6 2 555 709 40193613 40193768 2.570000e-58 237.0
22 TraesCS1D01G045500 chr1B 90.683 161 9 1 708 862 40193807 40193967 5.600000e-50 209.0
23 TraesCS1D01G045500 chr1B 95.402 87 3 1 1189 1275 40193980 40194065 2.680000e-28 137.0
24 TraesCS1D01G045500 chr1B 85.849 106 11 3 708 809 40195293 40195398 5.850000e-20 110.0
25 TraesCS1D01G045500 chr1A 87.125 1266 123 20 2338 3570 25711917 25713175 0.000000e+00 1399.0
26 TraesCS1D01G045500 chr1A 86.792 1007 86 26 3600 4574 25713346 25714337 0.000000e+00 1079.0
27 TraesCS1D01G045500 chr1A 82.527 1013 118 36 1341 2330 25710729 25711705 0.000000e+00 835.0
28 TraesCS1D01G045500 chr1A 84.779 611 57 15 740 1344 25709916 25710496 1.030000e-161 580.0
29 TraesCS1D01G045500 chr1A 87.421 318 29 7 895 1205 25791215 25791528 6.800000e-94 355.0
30 TraesCS1D01G045500 chr1A 82.908 392 43 12 4672 5058 25719450 25719822 1.150000e-86 331.0
31 TraesCS1D01G045500 chr1A 74.688 881 153 35 3818 4656 25794802 25795654 1.480000e-85 327.0
32 TraesCS1D01G045500 chr1A 79.714 419 51 18 1368 1764 25791821 25792227 7.040000e-69 272.0
33 TraesCS1D01G045500 chr1A 94.000 100 6 0 5123 5222 25719847 25719946 9.580000e-33 152.0
34 TraesCS1D01G045500 chr1A 92.000 100 8 0 5123 5222 25719971 25720070 2.070000e-29 141.0
35 TraesCS1D01G045500 chr1A 86.154 130 17 1 5122 5250 25720093 25720222 7.450000e-29 139.0
36 TraesCS1D01G045500 chrUn 86.047 86 12 0 3063 3148 88452624 88452709 5.890000e-15 93.5
37 TraesCS1D01G045500 chrUn 84.946 93 12 1 3063 3153 367578080 367577988 5.890000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G045500 chr1D 24786707 24792225 5518 False 10192.000000 10192 100.000000 1 5519 1 chr1D.!!$F1 5518
1 TraesCS1D01G045500 chr1D 24929816 24938032 8216 False 381.500000 1227 81.696167 996 5502 6 chr1D.!!$F3 4506
2 TraesCS1D01G045500 chr1D 25101320 25105736 4416 False 325.333333 375 81.396000 932 4666 3 chr1D.!!$F4 3734
3 TraesCS1D01G045500 chr1B 40193613 40200324 6711 False 961.166667 3229 90.665000 555 5213 6 chr1B.!!$F4 4658
4 TraesCS1D01G045500 chr1B 40360110 40363127 3017 False 664.666667 1186 82.628333 2768 5519 3 chr1B.!!$F5 2751
5 TraesCS1D01G045500 chr1B 40386683 40387694 1011 False 293.500000 322 84.157000 932 1738 2 chr1B.!!$F6 806
6 TraesCS1D01G045500 chr1A 25709916 25714337 4421 False 973.250000 1399 85.305750 740 4574 4 chr1A.!!$F1 3834
7 TraesCS1D01G045500 chr1A 25791215 25795654 4439 False 318.000000 355 80.607667 895 4656 3 chr1A.!!$F3 3761

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
511 512 0.030773 TGCATCGATCTGTACGGAGC 59.969 55.000 9.99 9.99 0.00 4.70 F
862 911 0.468226 CCCCACACAGTACACACACT 59.532 55.000 0.00 0.00 0.00 3.55 F
1887 3871 0.374758 ATGCTTTCACATAGTGCGCG 59.625 50.000 0.00 0.00 32.98 6.86 F
2011 5490 0.532573 TCTCCGGCTTCTTGCACTAG 59.467 55.000 0.00 0.00 45.15 2.57 F
2584 6781 1.270274 GCTCATGTTCATTGTGCCACA 59.730 47.619 0.00 0.00 0.00 4.17 F
4280 9746 1.669604 CTCGAGAGGATCCAGTTCGA 58.330 55.000 24.44 24.44 37.89 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1584 3521 1.003108 GCTCTGCGAAGTAGGAAAGC 58.997 55.000 0.00 0.00 41.75 3.51 R
2769 6995 0.769247 TCGTGATCCTAGATCCCCGA 59.231 55.000 10.54 10.54 0.00 5.14 R
3305 8531 1.129624 GTGCAAAGTGTGTTGTCGTCA 59.870 47.619 0.00 0.00 0.00 4.35 R
3516 8744 2.914214 GTCATGCGCGCAAAGATAAAAA 59.086 40.909 39.68 10.93 0.00 1.94 R
4330 9796 0.910566 ACCGTACCCCAGCATTGGTA 60.911 55.000 0.00 0.00 43.40 3.25 R
5446 12097 0.327924 TGGATTCATTCACCCGCAGT 59.672 50.000 0.00 0.00 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.376218 GATCGAGCTGTGGAATGCT 57.624 52.632 0.00 0.00 42.82 3.79
23 24 2.073232 AGCTGTGGAATGCTCAGGT 58.927 52.632 2.82 2.82 33.90 4.00
24 25 0.403271 AGCTGTGGAATGCTCAGGTT 59.597 50.000 2.82 0.00 36.70 3.50
25 26 1.202976 AGCTGTGGAATGCTCAGGTTT 60.203 47.619 2.82 0.00 36.70 3.27
26 27 1.615392 GCTGTGGAATGCTCAGGTTTT 59.385 47.619 6.01 0.00 0.00 2.43
27 28 2.352127 GCTGTGGAATGCTCAGGTTTTC 60.352 50.000 6.01 0.00 0.00 2.29
28 29 2.229784 CTGTGGAATGCTCAGGTTTTCC 59.770 50.000 0.00 0.00 38.48 3.13
29 30 2.238521 GTGGAATGCTCAGGTTTTCCA 58.761 47.619 0.00 0.00 43.98 3.53
30 31 2.229784 GTGGAATGCTCAGGTTTTCCAG 59.770 50.000 3.59 0.00 46.08 3.86
31 32 1.203287 GGAATGCTCAGGTTTTCCAGC 59.797 52.381 0.00 0.00 43.73 4.85
33 34 1.542492 ATGCTCAGGTTTTCCAGCAG 58.458 50.000 0.00 0.00 46.99 4.24
34 35 0.538057 TGCTCAGGTTTTCCAGCAGG 60.538 55.000 0.00 0.00 41.87 4.85
35 36 0.538287 GCTCAGGTTTTCCAGCAGGT 60.538 55.000 0.00 0.00 43.73 4.00
36 37 1.528129 CTCAGGTTTTCCAGCAGGTC 58.472 55.000 0.00 0.00 43.73 3.85
37 38 0.843309 TCAGGTTTTCCAGCAGGTCA 59.157 50.000 0.00 0.00 43.73 4.02
38 39 1.425066 TCAGGTTTTCCAGCAGGTCAT 59.575 47.619 0.00 0.00 43.73 3.06
39 40 2.642311 TCAGGTTTTCCAGCAGGTCATA 59.358 45.455 0.00 0.00 43.73 2.15
40 41 2.749621 CAGGTTTTCCAGCAGGTCATAC 59.250 50.000 0.00 0.00 43.73 2.39
41 42 2.375174 AGGTTTTCCAGCAGGTCATACA 59.625 45.455 0.00 0.00 43.73 2.29
42 43 3.010584 AGGTTTTCCAGCAGGTCATACAT 59.989 43.478 0.00 0.00 43.73 2.29
43 44 3.763897 GGTTTTCCAGCAGGTCATACATT 59.236 43.478 0.00 0.00 40.31 2.71
44 45 4.220602 GGTTTTCCAGCAGGTCATACATTT 59.779 41.667 0.00 0.00 40.31 2.32
45 46 5.163513 GTTTTCCAGCAGGTCATACATTTG 58.836 41.667 0.00 0.00 35.89 2.32
46 47 3.998913 TCCAGCAGGTCATACATTTGA 57.001 42.857 0.00 0.00 35.89 2.69
47 48 4.299586 TCCAGCAGGTCATACATTTGAA 57.700 40.909 0.00 0.00 35.89 2.69
48 49 4.858850 TCCAGCAGGTCATACATTTGAAT 58.141 39.130 0.00 0.00 35.89 2.57
49 50 4.883585 TCCAGCAGGTCATACATTTGAATC 59.116 41.667 0.00 0.00 35.89 2.52
50 51 4.260907 CCAGCAGGTCATACATTTGAATCG 60.261 45.833 0.00 0.00 0.00 3.34
51 52 3.313526 AGCAGGTCATACATTTGAATCGC 59.686 43.478 0.00 0.00 0.00 4.58
52 53 3.846023 GCAGGTCATACATTTGAATCGCG 60.846 47.826 0.00 0.00 0.00 5.87
53 54 2.287915 AGGTCATACATTTGAATCGCGC 59.712 45.455 0.00 0.00 0.00 6.86
54 55 2.289654 GTCATACATTTGAATCGCGCG 58.710 47.619 26.76 26.76 0.00 6.86
55 56 1.260297 TCATACATTTGAATCGCGCGG 59.740 47.619 31.69 13.66 0.00 6.46
56 57 0.041312 ATACATTTGAATCGCGCGGC 60.041 50.000 31.69 19.70 0.00 6.53
68 69 3.118454 CGCGGCGGACTCAATGTT 61.118 61.111 15.84 0.00 0.00 2.71
69 70 2.480555 GCGGCGGACTCAATGTTG 59.519 61.111 9.78 0.00 0.00 3.33
70 71 2.325082 GCGGCGGACTCAATGTTGT 61.325 57.895 9.78 0.00 0.00 3.32
71 72 1.017177 GCGGCGGACTCAATGTTGTA 61.017 55.000 9.78 0.00 0.00 2.41
72 73 0.999406 CGGCGGACTCAATGTTGTAG 59.001 55.000 0.00 0.00 0.00 2.74
73 74 0.727398 GGCGGACTCAATGTTGTAGC 59.273 55.000 0.00 0.00 0.00 3.58
74 75 0.727398 GCGGACTCAATGTTGTAGCC 59.273 55.000 0.00 0.00 0.00 3.93
75 76 1.676014 GCGGACTCAATGTTGTAGCCT 60.676 52.381 0.00 0.00 0.00 4.58
76 77 2.271800 CGGACTCAATGTTGTAGCCTC 58.728 52.381 0.00 0.00 0.00 4.70
77 78 2.093973 CGGACTCAATGTTGTAGCCTCT 60.094 50.000 0.00 0.00 0.00 3.69
78 79 3.617531 CGGACTCAATGTTGTAGCCTCTT 60.618 47.826 0.00 0.00 0.00 2.85
79 80 4.381612 CGGACTCAATGTTGTAGCCTCTTA 60.382 45.833 0.00 0.00 0.00 2.10
80 81 5.112686 GGACTCAATGTTGTAGCCTCTTAG 58.887 45.833 0.00 0.00 0.00 2.18
81 82 5.337652 GGACTCAATGTTGTAGCCTCTTAGT 60.338 44.000 0.00 0.00 0.00 2.24
82 83 6.115448 ACTCAATGTTGTAGCCTCTTAGTT 57.885 37.500 0.00 0.00 0.00 2.24
83 84 6.534634 ACTCAATGTTGTAGCCTCTTAGTTT 58.465 36.000 0.00 0.00 0.00 2.66
84 85 6.998673 ACTCAATGTTGTAGCCTCTTAGTTTT 59.001 34.615 0.00 0.00 0.00 2.43
85 86 8.154856 ACTCAATGTTGTAGCCTCTTAGTTTTA 58.845 33.333 0.00 0.00 0.00 1.52
86 87 8.547967 TCAATGTTGTAGCCTCTTAGTTTTAG 57.452 34.615 0.00 0.00 0.00 1.85
87 88 7.606456 TCAATGTTGTAGCCTCTTAGTTTTAGG 59.394 37.037 0.00 0.00 0.00 2.69
88 89 6.429521 TGTTGTAGCCTCTTAGTTTTAGGT 57.570 37.500 0.00 0.00 32.67 3.08
89 90 6.834107 TGTTGTAGCCTCTTAGTTTTAGGTT 58.166 36.000 0.00 0.00 32.67 3.50
90 91 7.284820 TGTTGTAGCCTCTTAGTTTTAGGTTT 58.715 34.615 0.00 0.00 32.67 3.27
91 92 7.443272 TGTTGTAGCCTCTTAGTTTTAGGTTTC 59.557 37.037 0.00 0.00 32.67 2.78
92 93 7.069877 TGTAGCCTCTTAGTTTTAGGTTTCA 57.930 36.000 0.00 0.00 32.67 2.69
93 94 7.159372 TGTAGCCTCTTAGTTTTAGGTTTCAG 58.841 38.462 0.00 0.00 32.67 3.02
94 95 5.004448 AGCCTCTTAGTTTTAGGTTTCAGC 58.996 41.667 0.00 0.00 32.67 4.26
95 96 5.004448 GCCTCTTAGTTTTAGGTTTCAGCT 58.996 41.667 0.00 0.00 32.67 4.24
96 97 5.122554 GCCTCTTAGTTTTAGGTTTCAGCTC 59.877 44.000 0.00 0.00 32.67 4.09
97 98 5.348997 CCTCTTAGTTTTAGGTTTCAGCTCG 59.651 44.000 0.00 0.00 0.00 5.03
98 99 6.092955 TCTTAGTTTTAGGTTTCAGCTCGA 57.907 37.500 0.00 0.00 0.00 4.04
99 100 5.924825 TCTTAGTTTTAGGTTTCAGCTCGAC 59.075 40.000 0.00 0.00 0.00 4.20
100 101 4.067972 AGTTTTAGGTTTCAGCTCGACA 57.932 40.909 0.00 0.00 0.00 4.35
101 102 4.642429 AGTTTTAGGTTTCAGCTCGACAT 58.358 39.130 0.00 0.00 0.00 3.06
102 103 5.790593 AGTTTTAGGTTTCAGCTCGACATA 58.209 37.500 0.00 0.00 0.00 2.29
103 104 6.407202 AGTTTTAGGTTTCAGCTCGACATAT 58.593 36.000 0.00 0.00 0.00 1.78
104 105 6.313905 AGTTTTAGGTTTCAGCTCGACATATG 59.686 38.462 0.00 0.00 0.00 1.78
105 106 2.555199 AGGTTTCAGCTCGACATATGC 58.445 47.619 1.58 0.00 0.00 3.14
106 107 1.599542 GGTTTCAGCTCGACATATGCC 59.400 52.381 1.58 0.00 0.00 4.40
107 108 2.555199 GTTTCAGCTCGACATATGCCT 58.445 47.619 1.58 0.00 0.00 4.75
108 109 2.939103 GTTTCAGCTCGACATATGCCTT 59.061 45.455 1.58 0.00 0.00 4.35
109 110 2.229675 TCAGCTCGACATATGCCTTG 57.770 50.000 1.58 0.00 0.00 3.61
110 111 1.756538 TCAGCTCGACATATGCCTTGA 59.243 47.619 1.58 0.00 0.00 3.02
111 112 2.133553 CAGCTCGACATATGCCTTGAG 58.866 52.381 1.58 4.54 0.00 3.02
112 113 2.034878 AGCTCGACATATGCCTTGAGA 58.965 47.619 12.64 0.37 0.00 3.27
113 114 2.131183 GCTCGACATATGCCTTGAGAC 58.869 52.381 12.64 3.41 0.00 3.36
114 115 2.481969 GCTCGACATATGCCTTGAGACA 60.482 50.000 12.64 0.00 0.00 3.41
115 116 3.785486 CTCGACATATGCCTTGAGACAA 58.215 45.455 1.58 0.00 0.00 3.18
116 117 3.785486 TCGACATATGCCTTGAGACAAG 58.215 45.455 1.58 4.73 0.00 3.16
117 118 2.868583 CGACATATGCCTTGAGACAAGG 59.131 50.000 21.66 21.66 40.39 3.61
125 126 3.375782 CCTTGAGACAAGGCCTTTTTG 57.624 47.619 17.61 8.57 0.00 2.44
126 127 2.958355 CCTTGAGACAAGGCCTTTTTGA 59.042 45.455 17.61 0.00 0.00 2.69
127 128 3.005155 CCTTGAGACAAGGCCTTTTTGAG 59.995 47.826 17.61 6.76 0.00 3.02
128 129 1.956477 TGAGACAAGGCCTTTTTGAGC 59.044 47.619 17.61 4.07 0.00 4.26
129 130 1.956477 GAGACAAGGCCTTTTTGAGCA 59.044 47.619 17.61 0.00 0.00 4.26
130 131 1.959282 AGACAAGGCCTTTTTGAGCAG 59.041 47.619 17.61 4.24 0.00 4.24
131 132 1.683385 GACAAGGCCTTTTTGAGCAGT 59.317 47.619 17.61 8.03 0.00 4.40
132 133 1.410153 ACAAGGCCTTTTTGAGCAGTG 59.590 47.619 17.61 3.37 0.00 3.66
133 134 1.682854 CAAGGCCTTTTTGAGCAGTGA 59.317 47.619 17.61 0.00 0.00 3.41
134 135 1.613836 AGGCCTTTTTGAGCAGTGAG 58.386 50.000 0.00 0.00 0.00 3.51
135 136 0.038801 GGCCTTTTTGAGCAGTGAGC 60.039 55.000 0.00 0.00 46.19 4.26
148 149 4.592485 GCAGTGAGCACCTACATATACT 57.408 45.455 0.00 0.00 44.79 2.12
149 150 4.551388 GCAGTGAGCACCTACATATACTC 58.449 47.826 0.00 0.00 44.79 2.59
150 151 4.279671 GCAGTGAGCACCTACATATACTCT 59.720 45.833 0.00 0.00 44.79 3.24
151 152 5.767269 CAGTGAGCACCTACATATACTCTG 58.233 45.833 0.00 0.00 0.00 3.35
152 153 4.279671 AGTGAGCACCTACATATACTCTGC 59.720 45.833 0.00 0.00 0.00 4.26
153 154 4.279671 GTGAGCACCTACATATACTCTGCT 59.720 45.833 0.00 0.00 36.22 4.24
154 155 4.895889 TGAGCACCTACATATACTCTGCTT 59.104 41.667 0.00 0.00 33.71 3.91
155 156 5.363868 TGAGCACCTACATATACTCTGCTTT 59.636 40.000 0.00 0.00 33.71 3.51
156 157 5.848406 AGCACCTACATATACTCTGCTTTC 58.152 41.667 0.00 0.00 29.16 2.62
157 158 5.600484 AGCACCTACATATACTCTGCTTTCT 59.400 40.000 0.00 0.00 29.16 2.52
158 159 6.098982 AGCACCTACATATACTCTGCTTTCTT 59.901 38.462 0.00 0.00 29.16 2.52
159 160 7.287927 AGCACCTACATATACTCTGCTTTCTTA 59.712 37.037 0.00 0.00 29.16 2.10
160 161 7.926555 GCACCTACATATACTCTGCTTTCTTAA 59.073 37.037 0.00 0.00 0.00 1.85
161 162 9.988815 CACCTACATATACTCTGCTTTCTTAAT 57.011 33.333 0.00 0.00 0.00 1.40
181 182 9.485206 TCTTAATTAGTGTAAAACAGAGTGGAC 57.515 33.333 0.00 0.00 0.00 4.02
182 183 9.268268 CTTAATTAGTGTAAAACAGAGTGGACA 57.732 33.333 0.00 0.00 0.00 4.02
183 184 9.616156 TTAATTAGTGTAAAACAGAGTGGACAA 57.384 29.630 0.00 0.00 0.00 3.18
184 185 6.913873 TTAGTGTAAAACAGAGTGGACAAC 57.086 37.500 0.00 0.00 0.00 3.32
185 186 5.099042 AGTGTAAAACAGAGTGGACAACT 57.901 39.130 0.00 0.00 43.85 3.16
186 187 5.497474 AGTGTAAAACAGAGTGGACAACTT 58.503 37.500 0.00 0.00 40.07 2.66
187 188 5.354234 AGTGTAAAACAGAGTGGACAACTTG 59.646 40.000 0.00 0.00 40.07 3.16
188 189 5.123344 GTGTAAAACAGAGTGGACAACTTGT 59.877 40.000 0.00 0.00 40.07 3.16
189 190 4.701956 AAAACAGAGTGGACAACTTGTG 57.298 40.909 0.00 0.00 40.07 3.33
190 191 3.627395 AACAGAGTGGACAACTTGTGA 57.373 42.857 0.00 0.00 40.07 3.58
191 192 3.185246 ACAGAGTGGACAACTTGTGAG 57.815 47.619 0.00 0.00 40.07 3.51
192 193 1.869767 CAGAGTGGACAACTTGTGAGC 59.130 52.381 0.00 0.00 40.07 4.26
193 194 1.486310 AGAGTGGACAACTTGTGAGCA 59.514 47.619 0.00 0.00 40.07 4.26
194 195 2.092968 AGAGTGGACAACTTGTGAGCAA 60.093 45.455 0.00 0.00 40.07 3.91
195 196 2.880890 GAGTGGACAACTTGTGAGCAAT 59.119 45.455 0.00 0.00 40.07 3.56
196 197 2.620115 AGTGGACAACTTGTGAGCAATG 59.380 45.455 0.00 0.00 34.57 2.82
197 198 1.955778 TGGACAACTTGTGAGCAATGG 59.044 47.619 0.00 0.00 33.65 3.16
198 199 1.956477 GGACAACTTGTGAGCAATGGT 59.044 47.619 0.00 0.00 33.65 3.55
199 200 2.287788 GGACAACTTGTGAGCAATGGTG 60.288 50.000 0.00 0.00 33.65 4.17
200 201 2.618241 GACAACTTGTGAGCAATGGTGA 59.382 45.455 0.00 0.00 33.65 4.02
201 202 2.620115 ACAACTTGTGAGCAATGGTGAG 59.380 45.455 0.00 0.00 33.65 3.51
202 203 1.901591 ACTTGTGAGCAATGGTGAGG 58.098 50.000 0.00 0.00 33.65 3.86
203 204 0.524862 CTTGTGAGCAATGGTGAGGC 59.475 55.000 0.00 0.00 33.65 4.70
204 205 1.236616 TTGTGAGCAATGGTGAGGCG 61.237 55.000 0.00 0.00 0.00 5.52
205 206 1.375908 GTGAGCAATGGTGAGGCGA 60.376 57.895 0.00 0.00 0.00 5.54
206 207 0.745845 GTGAGCAATGGTGAGGCGAT 60.746 55.000 0.00 0.00 0.00 4.58
207 208 0.745486 TGAGCAATGGTGAGGCGATG 60.745 55.000 0.00 0.00 0.00 3.84
208 209 0.745845 GAGCAATGGTGAGGCGATGT 60.746 55.000 0.00 0.00 0.00 3.06
209 210 1.028330 AGCAATGGTGAGGCGATGTG 61.028 55.000 0.00 0.00 0.00 3.21
210 211 1.430632 CAATGGTGAGGCGATGTGC 59.569 57.895 0.00 0.00 45.38 4.57
219 220 2.802792 GCGATGTGCATGCCATGT 59.197 55.556 21.57 4.31 45.45 3.21
220 221 1.587876 GCGATGTGCATGCCATGTG 60.588 57.895 21.57 15.61 45.45 3.21
221 222 1.995646 GCGATGTGCATGCCATGTGA 61.996 55.000 21.57 0.00 45.45 3.58
222 223 0.452585 CGATGTGCATGCCATGTGAA 59.547 50.000 21.57 0.00 0.00 3.18
223 224 1.135344 CGATGTGCATGCCATGTGAAA 60.135 47.619 21.57 0.00 0.00 2.69
224 225 2.671632 CGATGTGCATGCCATGTGAAAA 60.672 45.455 21.57 0.00 0.00 2.29
225 226 3.527533 GATGTGCATGCCATGTGAAAAT 58.472 40.909 21.57 0.77 0.00 1.82
226 227 3.404224 TGTGCATGCCATGTGAAAATT 57.596 38.095 16.68 0.00 0.00 1.82
227 228 4.532314 TGTGCATGCCATGTGAAAATTA 57.468 36.364 16.68 0.00 0.00 1.40
228 229 4.496360 TGTGCATGCCATGTGAAAATTAG 58.504 39.130 16.68 0.00 0.00 1.73
229 230 4.220163 TGTGCATGCCATGTGAAAATTAGA 59.780 37.500 16.68 0.00 0.00 2.10
230 231 5.170021 GTGCATGCCATGTGAAAATTAGAA 58.830 37.500 16.68 0.00 0.00 2.10
231 232 5.062558 GTGCATGCCATGTGAAAATTAGAAC 59.937 40.000 16.68 0.00 0.00 3.01
232 233 5.047164 TGCATGCCATGTGAAAATTAGAACT 60.047 36.000 16.68 0.00 0.00 3.01
233 234 5.870978 GCATGCCATGTGAAAATTAGAACTT 59.129 36.000 6.36 0.00 0.00 2.66
234 235 6.369615 GCATGCCATGTGAAAATTAGAACTTT 59.630 34.615 6.36 0.00 0.00 2.66
235 236 7.095102 GCATGCCATGTGAAAATTAGAACTTTT 60.095 33.333 6.36 0.00 0.00 2.27
236 237 7.712264 TGCCATGTGAAAATTAGAACTTTTG 57.288 32.000 0.00 0.00 0.00 2.44
237 238 7.271511 TGCCATGTGAAAATTAGAACTTTTGT 58.728 30.769 0.00 0.00 0.00 2.83
238 239 7.437862 TGCCATGTGAAAATTAGAACTTTTGTC 59.562 33.333 0.00 0.00 0.00 3.18
239 240 7.437862 GCCATGTGAAAATTAGAACTTTTGTCA 59.562 33.333 0.00 0.00 0.00 3.58
240 241 8.755018 CCATGTGAAAATTAGAACTTTTGTCAC 58.245 33.333 10.71 10.71 0.00 3.67
241 242 9.299963 CATGTGAAAATTAGAACTTTTGTCACA 57.700 29.630 17.30 17.30 36.05 3.58
242 243 8.909708 TGTGAAAATTAGAACTTTTGTCACAG 57.090 30.769 13.88 0.00 31.16 3.66
243 244 8.735315 TGTGAAAATTAGAACTTTTGTCACAGA 58.265 29.630 13.88 0.00 31.16 3.41
244 245 9.567848 GTGAAAATTAGAACTTTTGTCACAGAA 57.432 29.630 11.86 0.00 0.00 3.02
247 248 9.921637 AAAATTAGAACTTTTGTCACAGAAACA 57.078 25.926 0.00 0.00 0.00 2.83
249 250 9.736023 AATTAGAACTTTTGTCACAGAAACATC 57.264 29.630 0.00 0.00 0.00 3.06
250 251 6.757897 AGAACTTTTGTCACAGAAACATCA 57.242 33.333 0.00 0.00 0.00 3.07
251 252 6.555315 AGAACTTTTGTCACAGAAACATCAC 58.445 36.000 0.00 0.00 0.00 3.06
252 253 5.248870 ACTTTTGTCACAGAAACATCACC 57.751 39.130 0.00 0.00 0.00 4.02
253 254 4.097892 ACTTTTGTCACAGAAACATCACCC 59.902 41.667 0.00 0.00 0.00 4.61
254 255 1.877637 TGTCACAGAAACATCACCCG 58.122 50.000 0.00 0.00 0.00 5.28
255 256 0.517316 GTCACAGAAACATCACCCGC 59.483 55.000 0.00 0.00 0.00 6.13
256 257 0.107643 TCACAGAAACATCACCCGCA 59.892 50.000 0.00 0.00 0.00 5.69
257 258 0.950836 CACAGAAACATCACCCGCAA 59.049 50.000 0.00 0.00 0.00 4.85
258 259 1.069022 CACAGAAACATCACCCGCAAG 60.069 52.381 0.00 0.00 0.00 4.01
259 260 1.238439 CAGAAACATCACCCGCAAGT 58.762 50.000 0.00 0.00 0.00 3.16
260 261 2.224426 ACAGAAACATCACCCGCAAGTA 60.224 45.455 0.00 0.00 0.00 2.24
261 262 3.009723 CAGAAACATCACCCGCAAGTAT 58.990 45.455 0.00 0.00 0.00 2.12
262 263 3.063997 CAGAAACATCACCCGCAAGTATC 59.936 47.826 0.00 0.00 0.00 2.24
263 264 2.779755 AACATCACCCGCAAGTATCA 57.220 45.000 0.00 0.00 0.00 2.15
264 265 2.315925 ACATCACCCGCAAGTATCAG 57.684 50.000 0.00 0.00 0.00 2.90
265 266 1.555075 ACATCACCCGCAAGTATCAGT 59.445 47.619 0.00 0.00 0.00 3.41
266 267 2.027192 ACATCACCCGCAAGTATCAGTT 60.027 45.455 0.00 0.00 0.00 3.16
267 268 2.093306 TCACCCGCAAGTATCAGTTG 57.907 50.000 0.00 0.00 0.00 3.16
268 269 1.621317 TCACCCGCAAGTATCAGTTGA 59.379 47.619 0.00 0.00 30.18 3.18
269 270 2.236146 TCACCCGCAAGTATCAGTTGAT 59.764 45.455 0.00 0.00 38.51 2.57
270 271 3.009723 CACCCGCAAGTATCAGTTGATT 58.990 45.455 0.00 0.00 36.05 2.57
271 272 3.440173 CACCCGCAAGTATCAGTTGATTT 59.560 43.478 0.00 0.00 36.05 2.17
272 273 4.079253 ACCCGCAAGTATCAGTTGATTTT 58.921 39.130 0.00 0.00 36.05 1.82
273 274 4.522789 ACCCGCAAGTATCAGTTGATTTTT 59.477 37.500 0.00 0.00 36.05 1.94
274 275 4.858692 CCCGCAAGTATCAGTTGATTTTTG 59.141 41.667 0.00 6.86 36.05 2.44
275 276 4.324402 CCGCAAGTATCAGTTGATTTTTGC 59.676 41.667 21.13 21.13 42.57 3.68
276 277 4.324402 CGCAAGTATCAGTTGATTTTTGCC 59.676 41.667 23.02 13.68 42.77 4.52
277 278 5.473039 GCAAGTATCAGTTGATTTTTGCCT 58.527 37.500 20.77 2.44 41.51 4.75
278 279 5.574443 GCAAGTATCAGTTGATTTTTGCCTC 59.426 40.000 20.77 5.85 41.51 4.70
279 280 6.571150 GCAAGTATCAGTTGATTTTTGCCTCT 60.571 38.462 20.77 2.21 41.51 3.69
280 281 7.373493 CAAGTATCAGTTGATTTTTGCCTCTT 58.627 34.615 0.00 0.00 36.05 2.85
281 282 7.530426 AGTATCAGTTGATTTTTGCCTCTTT 57.470 32.000 0.00 0.00 36.05 2.52
282 283 7.373493 AGTATCAGTTGATTTTTGCCTCTTTG 58.627 34.615 0.00 0.00 36.05 2.77
283 284 4.947645 TCAGTTGATTTTTGCCTCTTTGG 58.052 39.130 0.00 0.00 39.35 3.28
285 286 9.617387 TATCAGTTGATTTTTGCCTCTTTGGCC 62.617 40.741 0.00 0.00 46.85 5.36
296 297 4.824479 CCTCTTTGGCCACCAATTTAAT 57.176 40.909 3.88 0.00 43.55 1.40
297 298 4.758688 CCTCTTTGGCCACCAATTTAATC 58.241 43.478 3.88 0.00 43.55 1.75
298 299 4.222588 CCTCTTTGGCCACCAATTTAATCA 59.777 41.667 3.88 0.00 43.55 2.57
299 300 5.104817 CCTCTTTGGCCACCAATTTAATCAT 60.105 40.000 3.88 0.00 43.55 2.45
300 301 6.098124 CCTCTTTGGCCACCAATTTAATCATA 59.902 38.462 3.88 0.00 43.55 2.15
301 302 6.872920 TCTTTGGCCACCAATTTAATCATAC 58.127 36.000 3.88 0.00 43.55 2.39
302 303 4.909696 TGGCCACCAATTTAATCATACG 57.090 40.909 0.00 0.00 0.00 3.06
303 304 4.527944 TGGCCACCAATTTAATCATACGA 58.472 39.130 0.00 0.00 0.00 3.43
304 305 4.950475 TGGCCACCAATTTAATCATACGAA 59.050 37.500 0.00 0.00 0.00 3.85
305 306 5.419155 TGGCCACCAATTTAATCATACGAAA 59.581 36.000 0.00 0.00 0.00 3.46
306 307 6.071334 TGGCCACCAATTTAATCATACGAAAA 60.071 34.615 0.00 0.00 0.00 2.29
307 308 6.983890 GGCCACCAATTTAATCATACGAAAAT 59.016 34.615 0.00 0.00 0.00 1.82
308 309 8.138712 GGCCACCAATTTAATCATACGAAAATA 58.861 33.333 0.00 0.00 0.00 1.40
309 310 9.691362 GCCACCAATTTAATCATACGAAAATAT 57.309 29.630 0.00 0.00 0.00 1.28
366 367 9.810870 AACCTTTTTACCAGTTTGTATATGGTA 57.189 29.630 0.00 0.00 45.44 3.25
393 394 6.558771 TTTTTCTACATCGATGGCCATATG 57.441 37.500 28.09 21.54 0.00 1.78
394 395 3.251479 TCTACATCGATGGCCATATGC 57.749 47.619 28.09 5.40 40.16 3.14
395 396 2.833943 TCTACATCGATGGCCATATGCT 59.166 45.455 28.09 12.34 40.92 3.79
396 397 1.817357 ACATCGATGGCCATATGCTG 58.183 50.000 28.09 17.74 40.92 4.41
397 398 1.348696 ACATCGATGGCCATATGCTGA 59.651 47.619 28.09 12.05 40.92 4.26
398 399 2.224597 ACATCGATGGCCATATGCTGAA 60.225 45.455 28.09 0.00 40.92 3.02
399 400 1.882912 TCGATGGCCATATGCTGAAC 58.117 50.000 20.84 2.02 40.92 3.18
400 401 1.417517 TCGATGGCCATATGCTGAACT 59.582 47.619 20.84 0.00 40.92 3.01
401 402 2.632512 TCGATGGCCATATGCTGAACTA 59.367 45.455 20.84 0.00 40.92 2.24
402 403 2.998670 CGATGGCCATATGCTGAACTAG 59.001 50.000 20.84 0.00 40.92 2.57
403 404 3.306294 CGATGGCCATATGCTGAACTAGA 60.306 47.826 20.84 0.00 40.92 2.43
404 405 4.622457 CGATGGCCATATGCTGAACTAGAT 60.622 45.833 20.84 0.00 40.92 1.98
405 406 4.277515 TGGCCATATGCTGAACTAGATC 57.722 45.455 0.00 0.00 40.92 2.75
406 407 3.257393 GGCCATATGCTGAACTAGATCG 58.743 50.000 0.00 0.00 40.92 3.69
407 408 3.056536 GGCCATATGCTGAACTAGATCGA 60.057 47.826 0.00 0.00 40.92 3.59
408 409 4.172505 GCCATATGCTGAACTAGATCGAG 58.827 47.826 0.00 0.70 36.87 4.04
409 410 4.172505 CCATATGCTGAACTAGATCGAGC 58.827 47.826 13.67 13.67 0.00 5.03
410 411 4.321527 CCATATGCTGAACTAGATCGAGCA 60.322 45.833 20.72 20.72 43.46 4.26
411 412 3.808466 ATGCTGAACTAGATCGAGCAA 57.192 42.857 21.63 11.66 42.63 3.91
412 413 3.156511 TGCTGAACTAGATCGAGCAAG 57.843 47.619 18.08 0.00 36.74 4.01
413 414 2.755103 TGCTGAACTAGATCGAGCAAGA 59.245 45.455 18.08 3.35 36.74 3.02
414 415 3.181492 TGCTGAACTAGATCGAGCAAGAG 60.181 47.826 18.08 0.00 36.74 2.85
415 416 3.066064 GCTGAACTAGATCGAGCAAGAGA 59.934 47.826 2.38 0.00 0.00 3.10
416 417 4.261572 GCTGAACTAGATCGAGCAAGAGAT 60.262 45.833 2.38 0.00 0.00 2.75
417 418 5.180367 TGAACTAGATCGAGCAAGAGATG 57.820 43.478 2.38 0.00 0.00 2.90
418 419 4.884164 TGAACTAGATCGAGCAAGAGATGA 59.116 41.667 2.38 0.00 0.00 2.92
419 420 4.829064 ACTAGATCGAGCAAGAGATGAC 57.171 45.455 2.38 0.00 0.00 3.06
420 421 4.203226 ACTAGATCGAGCAAGAGATGACA 58.797 43.478 2.38 0.00 0.00 3.58
421 422 4.826733 ACTAGATCGAGCAAGAGATGACAT 59.173 41.667 2.38 0.00 0.00 3.06
422 423 6.000840 ACTAGATCGAGCAAGAGATGACATA 58.999 40.000 2.38 0.00 0.00 2.29
423 424 5.119931 AGATCGAGCAAGAGATGACATAC 57.880 43.478 2.38 0.00 0.00 2.39
424 425 3.340337 TCGAGCAAGAGATGACATACG 57.660 47.619 0.00 0.00 0.00 3.06
425 426 1.783711 CGAGCAAGAGATGACATACGC 59.216 52.381 0.00 0.00 0.00 4.42
426 427 2.796032 CGAGCAAGAGATGACATACGCA 60.796 50.000 0.00 0.00 0.00 5.24
427 428 2.793790 GAGCAAGAGATGACATACGCAG 59.206 50.000 0.00 0.00 0.00 5.18
446 447 7.792374 ACGCAGTAAGATAACATCAATGAAT 57.208 32.000 0.00 0.00 41.94 2.57
447 448 7.633621 ACGCAGTAAGATAACATCAATGAATG 58.366 34.615 0.00 0.00 41.94 2.67
448 449 6.576313 CGCAGTAAGATAACATCAATGAATGC 59.424 38.462 0.00 0.00 0.00 3.56
449 450 7.420002 GCAGTAAGATAACATCAATGAATGCA 58.580 34.615 0.00 0.00 0.00 3.96
450 451 8.080417 GCAGTAAGATAACATCAATGAATGCAT 58.920 33.333 0.00 0.00 35.92 3.96
451 452 9.394477 CAGTAAGATAACATCAATGAATGCATG 57.606 33.333 0.00 0.00 34.26 4.06
452 453 9.128404 AGTAAGATAACATCAATGAATGCATGT 57.872 29.630 0.00 0.00 34.26 3.21
455 456 7.578852 AGATAACATCAATGAATGCATGTACG 58.421 34.615 0.00 0.00 34.26 3.67
456 457 4.556942 ACATCAATGAATGCATGTACGG 57.443 40.909 0.00 0.00 34.26 4.02
457 458 3.947196 ACATCAATGAATGCATGTACGGT 59.053 39.130 0.00 0.00 34.26 4.83
458 459 4.398988 ACATCAATGAATGCATGTACGGTT 59.601 37.500 0.00 0.00 34.26 4.44
459 460 5.105797 ACATCAATGAATGCATGTACGGTTT 60.106 36.000 0.00 0.00 34.26 3.27
460 461 4.731720 TCAATGAATGCATGTACGGTTTG 58.268 39.130 0.00 0.00 34.26 2.93
461 462 4.457257 TCAATGAATGCATGTACGGTTTGA 59.543 37.500 0.00 0.98 34.26 2.69
462 463 5.048434 TCAATGAATGCATGTACGGTTTGAA 60.048 36.000 0.00 0.00 34.26 2.69
463 464 5.581126 ATGAATGCATGTACGGTTTGAAT 57.419 34.783 0.00 0.00 32.31 2.57
464 465 4.731720 TGAATGCATGTACGGTTTGAATG 58.268 39.130 0.00 0.00 0.00 2.67
465 466 4.457257 TGAATGCATGTACGGTTTGAATGA 59.543 37.500 0.00 0.00 0.00 2.57
466 467 5.048434 TGAATGCATGTACGGTTTGAATGAA 60.048 36.000 0.00 0.00 0.00 2.57
467 468 4.153958 TGCATGTACGGTTTGAATGAAC 57.846 40.909 0.00 0.00 0.00 3.18
468 469 3.818210 TGCATGTACGGTTTGAATGAACT 59.182 39.130 0.00 0.00 0.00 3.01
469 470 4.998033 TGCATGTACGGTTTGAATGAACTA 59.002 37.500 0.00 0.00 0.00 2.24
470 471 5.121611 TGCATGTACGGTTTGAATGAACTAG 59.878 40.000 0.00 0.00 0.00 2.57
471 472 5.560148 CATGTACGGTTTGAATGAACTAGC 58.440 41.667 0.00 0.00 0.00 3.42
472 473 4.633175 TGTACGGTTTGAATGAACTAGCA 58.367 39.130 0.00 0.00 0.00 3.49
473 474 5.057819 TGTACGGTTTGAATGAACTAGCAA 58.942 37.500 0.00 0.00 0.00 3.91
474 475 4.749245 ACGGTTTGAATGAACTAGCAAG 57.251 40.909 0.00 0.00 0.00 4.01
475 476 4.134563 ACGGTTTGAATGAACTAGCAAGT 58.865 39.130 0.00 0.00 37.65 3.16
477 478 4.911610 CGGTTTGAATGAACTAGCAAGTTG 59.088 41.667 0.00 0.00 46.09 3.16
478 479 5.505654 CGGTTTGAATGAACTAGCAAGTTGT 60.506 40.000 4.48 0.00 46.09 3.32
479 480 6.273071 GGTTTGAATGAACTAGCAAGTTGTT 58.727 36.000 4.48 0.30 46.09 2.83
480 481 7.422399 GGTTTGAATGAACTAGCAAGTTGTTA 58.578 34.615 4.48 1.69 46.09 2.41
481 482 7.918562 GGTTTGAATGAACTAGCAAGTTGTTAA 59.081 33.333 4.48 0.00 46.09 2.01
482 483 9.296400 GTTTGAATGAACTAGCAAGTTGTTAAA 57.704 29.630 4.48 0.00 46.09 1.52
489 490 8.564574 TGAACTAGCAAGTTGTTAAATTACAGG 58.435 33.333 4.48 0.00 46.09 4.00
490 491 8.459911 AACTAGCAAGTTGTTAAATTACAGGT 57.540 30.769 4.48 0.00 44.40 4.00
491 492 8.095937 ACTAGCAAGTTGTTAAATTACAGGTC 57.904 34.615 4.48 0.00 29.00 3.85
492 493 7.937394 ACTAGCAAGTTGTTAAATTACAGGTCT 59.063 33.333 4.48 0.00 29.00 3.85
493 494 6.970484 AGCAAGTTGTTAAATTACAGGTCTG 58.030 36.000 4.48 0.00 0.00 3.51
494 495 5.629435 GCAAGTTGTTAAATTACAGGTCTGC 59.371 40.000 4.48 0.00 0.00 4.26
495 496 6.734137 CAAGTTGTTAAATTACAGGTCTGCA 58.266 36.000 0.00 0.00 0.00 4.41
496 497 7.370383 CAAGTTGTTAAATTACAGGTCTGCAT 58.630 34.615 0.00 0.00 0.00 3.96
497 498 7.145932 AGTTGTTAAATTACAGGTCTGCATC 57.854 36.000 0.00 0.00 0.00 3.91
498 499 5.794687 TGTTAAATTACAGGTCTGCATCG 57.205 39.130 0.00 0.00 0.00 3.84
499 500 5.483811 TGTTAAATTACAGGTCTGCATCGA 58.516 37.500 0.00 0.00 0.00 3.59
500 501 6.112734 TGTTAAATTACAGGTCTGCATCGAT 58.887 36.000 0.00 0.00 0.00 3.59
501 502 6.257849 TGTTAAATTACAGGTCTGCATCGATC 59.742 38.462 0.00 0.00 0.00 3.69
502 503 4.679373 AATTACAGGTCTGCATCGATCT 57.321 40.909 0.00 0.00 0.00 2.75
503 504 3.443099 TTACAGGTCTGCATCGATCTG 57.557 47.619 13.25 13.25 45.50 2.90
506 507 2.736978 CAGGTCTGCATCGATCTGTAC 58.263 52.381 7.84 0.00 37.37 2.90
507 508 1.335182 AGGTCTGCATCGATCTGTACG 59.665 52.381 0.00 0.00 0.00 3.67
508 509 1.600663 GGTCTGCATCGATCTGTACGG 60.601 57.143 0.00 0.00 0.00 4.02
509 510 1.333931 GTCTGCATCGATCTGTACGGA 59.666 52.381 6.90 6.90 0.00 4.69
510 511 1.604278 TCTGCATCGATCTGTACGGAG 59.396 52.381 10.75 0.00 0.00 4.63
511 512 0.030773 TGCATCGATCTGTACGGAGC 59.969 55.000 9.99 9.99 0.00 4.70
512 513 0.030773 GCATCGATCTGTACGGAGCA 59.969 55.000 19.40 7.52 33.77 4.26
513 514 1.759994 CATCGATCTGTACGGAGCAC 58.240 55.000 19.40 8.19 0.00 4.40
514 515 0.669077 ATCGATCTGTACGGAGCACC 59.331 55.000 19.40 3.90 0.00 5.01
525 526 4.481112 GAGCACCGCCGGCATTTG 62.481 66.667 28.98 20.17 0.00 2.32
527 528 4.776647 GCACCGCCGGCATTTGTC 62.777 66.667 28.98 11.64 0.00 3.18
528 529 4.459331 CACCGCCGGCATTTGTCG 62.459 66.667 28.98 7.87 43.72 4.35
537 538 1.647346 GGCATTTGTCGATGTACGGA 58.353 50.000 0.00 0.00 42.82 4.69
538 539 1.593006 GGCATTTGTCGATGTACGGAG 59.407 52.381 0.00 0.00 42.82 4.63
539 540 1.593006 GCATTTGTCGATGTACGGAGG 59.407 52.381 0.00 0.00 42.82 4.30
540 541 2.201732 CATTTGTCGATGTACGGAGGG 58.798 52.381 0.00 0.00 42.82 4.30
541 542 1.548081 TTTGTCGATGTACGGAGGGA 58.452 50.000 0.00 0.00 42.82 4.20
542 543 1.548081 TTGTCGATGTACGGAGGGAA 58.452 50.000 0.00 0.00 42.82 3.97
543 544 1.548081 TGTCGATGTACGGAGGGAAA 58.452 50.000 0.00 0.00 42.82 3.13
544 545 2.104967 TGTCGATGTACGGAGGGAAAT 58.895 47.619 0.00 0.00 42.82 2.17
545 546 2.498481 TGTCGATGTACGGAGGGAAATT 59.502 45.455 0.00 0.00 42.82 1.82
546 547 2.864343 GTCGATGTACGGAGGGAAATTG 59.136 50.000 0.00 0.00 42.82 2.32
547 548 2.498481 TCGATGTACGGAGGGAAATTGT 59.502 45.455 0.00 0.00 42.82 2.71
548 549 3.055675 TCGATGTACGGAGGGAAATTGTT 60.056 43.478 0.00 0.00 42.82 2.83
549 550 4.160065 TCGATGTACGGAGGGAAATTGTTA 59.840 41.667 0.00 0.00 42.82 2.41
550 551 4.871557 CGATGTACGGAGGGAAATTGTTAA 59.128 41.667 0.00 0.00 38.46 2.01
551 552 5.352016 CGATGTACGGAGGGAAATTGTTAAA 59.648 40.000 0.00 0.00 38.46 1.52
552 553 6.128227 CGATGTACGGAGGGAAATTGTTAAAA 60.128 38.462 0.00 0.00 38.46 1.52
553 554 6.316440 TGTACGGAGGGAAATTGTTAAAAC 57.684 37.500 0.00 0.00 0.00 2.43
561 562 5.659079 AGGGAAATTGTTAAAACACAGTGGA 59.341 36.000 5.31 0.00 38.92 4.02
562 563 6.155393 AGGGAAATTGTTAAAACACAGTGGAA 59.845 34.615 5.31 0.00 38.92 3.53
606 607 0.940126 GGGCACATGCAGACGATTAG 59.060 55.000 6.15 0.00 44.36 1.73
663 666 0.606401 CGCAAAGCTCCAAAGAGGGA 60.606 55.000 0.00 0.00 40.79 4.20
666 669 2.365293 GCAAAGCTCCAAAGAGGGAAAA 59.635 45.455 0.00 0.00 40.79 2.29
667 670 3.181466 GCAAAGCTCCAAAGAGGGAAAAA 60.181 43.478 0.00 0.00 40.79 1.94
788 837 1.924731 TGGAATGACGAGACTGAGGT 58.075 50.000 0.00 0.00 0.00 3.85
841 890 1.213296 ACAACCTCAGGTGACCAACT 58.787 50.000 3.63 0.00 35.34 3.16
846 895 1.842381 CTCAGGTGACCAACTCCCCC 61.842 65.000 3.63 0.00 33.10 5.40
862 911 0.468226 CCCCACACAGTACACACACT 59.532 55.000 0.00 0.00 0.00 3.55
864 913 1.412710 CCCACACAGTACACACACTCT 59.587 52.381 0.00 0.00 0.00 3.24
866 915 2.362397 CCACACAGTACACACACTCTCT 59.638 50.000 0.00 0.00 0.00 3.10
868 917 3.316588 CACACAGTACACACACTCTCTCT 59.683 47.826 0.00 0.00 0.00 3.10
869 918 3.954904 ACACAGTACACACACTCTCTCTT 59.045 43.478 0.00 0.00 0.00 2.85
870 919 4.036971 ACACAGTACACACACTCTCTCTTC 59.963 45.833 0.00 0.00 0.00 2.87
871 920 4.277174 CACAGTACACACACTCTCTCTTCT 59.723 45.833 0.00 0.00 0.00 2.85
872 921 4.890581 ACAGTACACACACTCTCTCTTCTT 59.109 41.667 0.00 0.00 0.00 2.52
873 922 5.009210 ACAGTACACACACTCTCTCTTCTTC 59.991 44.000 0.00 0.00 0.00 2.87
874 923 5.240623 CAGTACACACACTCTCTCTTCTTCT 59.759 44.000 0.00 0.00 0.00 2.85
876 925 5.606348 ACACACACTCTCTCTTCTTCTTT 57.394 39.130 0.00 0.00 0.00 2.52
877 926 5.983540 ACACACACTCTCTCTTCTTCTTTT 58.016 37.500 0.00 0.00 0.00 2.27
878 927 6.410540 ACACACACTCTCTCTTCTTCTTTTT 58.589 36.000 0.00 0.00 0.00 1.94
917 2427 4.076394 ACTACACACACTCTCTCTTCTCC 58.924 47.826 0.00 0.00 0.00 3.71
924 2434 2.694628 CACTCTCTCTTCTCCCCATCTG 59.305 54.545 0.00 0.00 0.00 2.90
1135 2681 4.873129 ATGCGCAGGTAGCCGTCG 62.873 66.667 18.32 0.00 41.38 5.12
1155 2701 1.192146 TCCTCTTCTCCAACACCGGG 61.192 60.000 6.32 0.00 0.00 5.73
1178 2724 2.097791 GCCTCTACGACTACTCCAACTG 59.902 54.545 0.00 0.00 0.00 3.16
1232 2866 6.070596 TGGCTCTTCAAGTTCATCTTCTATCA 60.071 38.462 0.00 0.00 33.63 2.15
1233 2867 6.479660 GGCTCTTCAAGTTCATCTTCTATCAG 59.520 42.308 0.00 0.00 33.63 2.90
1234 2868 7.264221 GCTCTTCAAGTTCATCTTCTATCAGA 58.736 38.462 0.00 0.00 33.63 3.27
1275 2910 4.438744 GCATCCGTCAAACTAATTTGGGAG 60.439 45.833 0.00 0.00 44.61 4.30
1279 2914 4.700213 CCGTCAAACTAATTTGGGAGACAT 59.300 41.667 0.00 0.00 44.61 3.06
1427 3351 7.852945 GTCAATGTTCCGAGCTAGATTTAATTG 59.147 37.037 0.00 0.04 0.00 2.32
1450 3374 4.502645 GGTTTCTTCATTCCACACAAAACG 59.497 41.667 0.00 0.00 0.00 3.60
1453 3377 6.438259 TTCTTCATTCCACACAAAACGTTA 57.562 33.333 0.00 0.00 0.00 3.18
1567 3504 1.478105 GCCTTGTTGCTCCTAATTGGG 59.522 52.381 0.35 0.35 36.20 4.12
1584 3521 6.493449 AATTGGGTTTTTGGCGATATTTTG 57.507 33.333 0.00 0.00 0.00 2.44
1742 3702 9.481340 TGATATGTGTAATCTCAGTTAAGCATC 57.519 33.333 0.00 0.00 0.00 3.91
1887 3871 0.374758 ATGCTTTCACATAGTGCGCG 59.625 50.000 0.00 0.00 32.98 6.86
1941 5352 1.133699 TGCCTCCATGCTATTTCCCTG 60.134 52.381 0.00 0.00 0.00 4.45
1943 5354 2.579873 CCTCCATGCTATTTCCCTGTG 58.420 52.381 0.00 0.00 0.00 3.66
1997 5469 3.491267 GGTCGCATTATTTTCTCTCTCCG 59.509 47.826 0.00 0.00 0.00 4.63
2011 5490 0.532573 TCTCCGGCTTCTTGCACTAG 59.467 55.000 0.00 0.00 45.15 2.57
2017 5496 3.064207 CGGCTTCTTGCACTAGTAACAA 58.936 45.455 9.47 9.47 45.15 2.83
2058 5538 8.730680 GTGGTCATTTTATACTGTCTCACATTT 58.269 33.333 0.00 0.00 0.00 2.32
2075 5555 5.058490 CACATTTTCATGCTCCCACTTTTT 58.942 37.500 0.00 0.00 33.05 1.94
2137 5647 7.865706 ATGACTACTTTTTCCATGTATCCAC 57.134 36.000 0.00 0.00 0.00 4.02
2179 5692 7.973388 TCATTAGCCAATTTATTTTCTTCGGTG 59.027 33.333 0.00 0.00 0.00 4.94
2207 5720 3.652057 AGATACCAACCAAGTCCATGG 57.348 47.619 4.97 4.97 46.38 3.66
2216 5729 3.778265 ACCAAGTCCATGGCATTAGTTT 58.222 40.909 6.96 0.00 44.75 2.66
2220 5740 7.297614 ACCAAGTCCATGGCATTAGTTTATAT 58.702 34.615 6.96 0.00 44.75 0.86
2222 5742 9.466497 CCAAGTCCATGGCATTAGTTTATATAT 57.534 33.333 6.96 0.00 32.78 0.86
2314 5871 7.549147 AACTAGGACAATACTACAGAAACCA 57.451 36.000 0.00 0.00 0.00 3.67
2538 6734 7.820044 AGTTCATCGAGTCTTTTCTTCATAC 57.180 36.000 0.00 0.00 0.00 2.39
2546 6742 9.574458 TCGAGTCTTTTCTTCATACTTCTATTG 57.426 33.333 0.00 0.00 0.00 1.90
2584 6781 1.270274 GCTCATGTTCATTGTGCCACA 59.730 47.619 0.00 0.00 0.00 4.17
2599 6796 2.224818 TGCCACATGGATAGCATGCATA 60.225 45.455 21.98 9.79 39.45 3.14
2697 6923 6.317088 ACGATGATCACTAATTTGCAAACAG 58.683 36.000 15.41 16.45 0.00 3.16
2705 6931 6.345096 ACTAATTTGCAAACAGCCATTAGT 57.655 33.333 20.25 20.25 45.12 2.24
2737 6963 4.959080 TCCAGATAGCCATATCCCATGTA 58.041 43.478 0.00 0.00 38.94 2.29
2742 6968 6.100859 CAGATAGCCATATCCCATGTAGGAAT 59.899 42.308 0.00 0.00 40.04 3.01
2743 6969 6.680197 AGATAGCCATATCCCATGTAGGAATT 59.320 38.462 0.00 0.00 40.04 2.17
2760 6986 1.885049 ATTCCTAGCTCTCCCTTGCA 58.115 50.000 0.00 0.00 0.00 4.08
2769 6995 3.836562 AGCTCTCCCTTGCAATTTTTCAT 59.163 39.130 0.00 0.00 0.00 2.57
2827 8010 3.194005 TCCCGGTCTAAATCTGAATGC 57.806 47.619 0.00 0.00 0.00 3.56
2855 8038 5.875224 TCATTCCCAACATCTTACACAAGA 58.125 37.500 0.00 0.00 44.77 3.02
2902 8093 2.159085 AGGCACTAGATCGGTTAGCAAC 60.159 50.000 0.00 0.00 36.02 4.17
2956 8150 2.857186 TTAGCAGTTCCAGTGCATGA 57.143 45.000 0.00 0.00 46.65 3.07
2997 8193 6.882678 ACCAAATTAGAATACACCCACTACAC 59.117 38.462 0.00 0.00 0.00 2.90
3149 8370 7.071069 TGCAAGAGAATCATAGGTATGACAT 57.929 36.000 1.72 0.00 44.66 3.06
3280 8502 9.985730 AAATTATGTACATTCAATGCCCTAATG 57.014 29.630 14.77 0.00 36.80 1.90
3305 8531 8.385491 TGGGTGCATTATTCATACTCAGATTAT 58.615 33.333 0.00 0.00 0.00 1.28
3318 8544 4.923871 ACTCAGATTATGACGACAACACAC 59.076 41.667 0.00 0.00 33.22 3.82
3369 8595 6.721208 TCCATGTAGTGTCAGAGCATATATCA 59.279 38.462 0.00 0.00 0.00 2.15
3495 8723 2.213499 GTCATGCATTTCCCTCTACCG 58.787 52.381 0.00 0.00 0.00 4.02
3511 8739 2.693267 ACCGCTCCCTTAGTTTCATC 57.307 50.000 0.00 0.00 0.00 2.92
3515 8743 3.600388 CGCTCCCTTAGTTTCATCACTT 58.400 45.455 0.00 0.00 0.00 3.16
3516 8744 4.003648 CGCTCCCTTAGTTTCATCACTTT 58.996 43.478 0.00 0.00 0.00 2.66
3546 8774 2.449189 TGCGCGCATGACAAAAATATC 58.551 42.857 33.09 0.00 0.00 1.63
3571 8799 4.782019 TGTACAATGAAAGGCAATGTCC 57.218 40.909 0.00 0.00 39.77 4.02
3636 9016 9.809395 AGAAGAGCACTAATATATGTGTACCTA 57.191 33.333 8.99 0.00 36.63 3.08
3696 9076 2.708861 TCTGGCTTAGGTTTGGAAGACA 59.291 45.455 0.00 0.00 38.39 3.41
3712 9092 4.141824 GGAAGACATGAGGGGTTTAGAGAG 60.142 50.000 0.00 0.00 0.00 3.20
3764 9151 4.873827 CGGCTAACAAAGGTAATGCTTAGA 59.126 41.667 0.00 0.00 0.00 2.10
3771 9158 7.440523 ACAAAGGTAATGCTTAGAGTTCTTG 57.559 36.000 0.00 0.00 0.00 3.02
3843 9264 2.773487 AGTGCCATTAACTGCGTTGTA 58.227 42.857 4.52 0.00 0.00 2.41
3916 9342 9.869757 GAAGGTTAATGCTTTTACCATTACAAT 57.130 29.630 19.11 0.00 37.06 2.71
4091 9538 7.862274 TGAGTATAAGAGTCCATCCATGAAT 57.138 36.000 0.00 0.00 0.00 2.57
4140 9594 7.682787 AAAGAGTACTCAATCCATACTCCAT 57.317 36.000 24.44 0.00 43.90 3.41
4280 9746 1.669604 CTCGAGAGGATCCAGTTCGA 58.330 55.000 24.44 24.44 37.89 3.71
4330 9796 3.463048 AAGGGATGAGCAACCAGAATT 57.537 42.857 0.00 0.00 0.00 2.17
4336 9802 4.646492 GGATGAGCAACCAGAATTACCAAT 59.354 41.667 0.00 0.00 0.00 3.16
4462 9967 2.106477 TGCATGCAATCGACTACCAA 57.894 45.000 20.30 0.00 0.00 3.67
4473 9978 4.866508 TCGACTACCAACTGACTGATTT 57.133 40.909 0.00 0.00 0.00 2.17
4511 10025 9.726232 GTTAAAAGTTTTTACTACAAGGACTGG 57.274 33.333 6.10 0.00 32.77 4.00
4513 10027 4.395625 AGTTTTTACTACAAGGACTGGCC 58.604 43.478 0.00 0.00 0.00 5.36
4531 10050 2.166459 GGCCGATGATCGAGGATTGATA 59.834 50.000 17.52 0.00 43.74 2.15
4591 10126 3.009584 TGTTTGTGCCATGTCTACCCATA 59.990 43.478 0.00 0.00 0.00 2.74
4596 10131 6.943899 TGTGCCATGTCTACCCATATATTA 57.056 37.500 0.00 0.00 0.00 0.98
4640 10175 2.512485 TTTGCAACTTGCTCCATGTG 57.488 45.000 14.78 0.00 45.31 3.21
4759 10332 3.883489 GGTTAGAGTTTTCAGTTGCAGGT 59.117 43.478 0.00 0.00 0.00 4.00
4779 10352 5.466432 GGTAAAACCTTCTGCGAGATTAC 57.534 43.478 0.00 0.00 34.73 1.89
4788 10361 3.211865 TCTGCGAGATTACGAGTACCAT 58.788 45.455 0.00 0.00 35.09 3.55
4791 10364 6.168389 TCTGCGAGATTACGAGTACCATATA 58.832 40.000 0.00 0.00 35.09 0.86
4792 10365 6.822170 TCTGCGAGATTACGAGTACCATATAT 59.178 38.462 0.00 0.00 35.09 0.86
4793 10366 7.336176 TCTGCGAGATTACGAGTACCATATATT 59.664 37.037 0.00 0.00 35.09 1.28
4805 10379 8.765219 CGAGTACCATATATTTCAAGGAAGTTG 58.235 37.037 0.00 0.00 37.52 3.16
4818 10398 3.434940 GGAAGTTGTCCATACCAGGTT 57.565 47.619 0.00 0.00 46.97 3.50
4825 10405 0.625316 TCCATACCAGGTTGCTGCAT 59.375 50.000 1.84 0.00 0.00 3.96
4826 10406 0.742505 CCATACCAGGTTGCTGCATG 59.257 55.000 1.84 0.00 0.00 4.06
4841 10421 6.964741 TGCTGCATGTTACCATTTTATTTG 57.035 33.333 0.00 0.00 0.00 2.32
4844 10424 7.117523 TGCTGCATGTTACCATTTTATTTGAAC 59.882 33.333 0.00 0.00 0.00 3.18
4914 10495 6.082338 CAGTTTTCTGTGTGTCATGAATAGC 58.918 40.000 0.00 0.00 42.48 2.97
4915 10496 5.182001 AGTTTTCTGTGTGTCATGAATAGCC 59.818 40.000 0.00 0.00 0.00 3.93
4943 10524 6.254373 GGTAGCTAAACGGAACACTAACATAC 59.746 42.308 0.00 0.00 0.00 2.39
4947 10528 6.073657 GCTAAACGGAACACTAACATACACAA 60.074 38.462 0.00 0.00 0.00 3.33
4969 10734 4.975788 ACATAATGTACGCGCATGAAAAA 58.024 34.783 5.73 0.00 0.00 1.94
5004 10769 5.419155 TCGATAGACTTTCTCACATGGTTCT 59.581 40.000 0.00 0.00 42.67 3.01
5005 10770 6.602009 TCGATAGACTTTCTCACATGGTTCTA 59.398 38.462 0.00 0.00 42.67 2.10
5006 10771 7.122204 TCGATAGACTTTCTCACATGGTTCTAA 59.878 37.037 0.00 0.00 42.67 2.10
5007 10772 7.923344 CGATAGACTTTCTCACATGGTTCTAAT 59.077 37.037 0.00 0.00 39.76 1.73
5036 10801 1.599542 GACAGTGCACTTGTTGAGGTC 59.400 52.381 18.94 15.56 0.00 3.85
5044 10809 2.065799 ACTTGTTGAGGTCCCCTGATT 58.934 47.619 0.00 0.00 31.76 2.57
5059 10824 4.276926 CCCCTGATTTGCTAGATGCTTTAC 59.723 45.833 0.00 0.00 43.37 2.01
5141 10906 1.785518 CGTACATTTGTTTCCGCGCTC 60.786 52.381 5.56 0.00 0.00 5.03
5206 10973 9.703892 CGAGAGAGGATAACAAATCAAAGATAT 57.296 33.333 0.00 0.00 0.00 1.63
5225 10992 9.725019 AAAGATATGAATCTATCGCCATAACAA 57.275 29.630 0.00 0.00 41.81 2.83
5232 10999 9.990360 TGAATCTATCGCCATAACAAATAACTA 57.010 29.630 0.00 0.00 0.00 2.24
5256 11886 3.685139 TTTGTGTTGCCTTTTTGGTCA 57.315 38.095 0.00 0.00 38.35 4.02
5258 11888 3.244033 TGTGTTGCCTTTTTGGTCAAG 57.756 42.857 0.00 0.00 38.35 3.02
5261 11891 2.170187 TGTTGCCTTTTTGGTCAAGCAT 59.830 40.909 0.00 0.00 38.35 3.79
5272 11914 0.385974 GTCAAGCATGCGTTCGCTTT 60.386 50.000 13.01 0.00 46.04 3.51
5273 11915 0.110238 TCAAGCATGCGTTCGCTTTC 60.110 50.000 13.01 6.67 46.04 2.62
5274 11916 1.067199 CAAGCATGCGTTCGCTTTCC 61.067 55.000 13.01 5.77 46.04 3.13
5275 11917 2.200170 AAGCATGCGTTCGCTTTCCC 62.200 55.000 13.01 3.63 46.04 3.97
5276 11918 2.690778 GCATGCGTTCGCTTTCCCT 61.691 57.895 17.63 0.00 0.00 4.20
5277 11919 1.875963 CATGCGTTCGCTTTCCCTT 59.124 52.632 17.63 0.00 0.00 3.95
5278 11920 0.240945 CATGCGTTCGCTTTCCCTTT 59.759 50.000 17.63 0.00 0.00 3.11
5279 11921 0.521735 ATGCGTTCGCTTTCCCTTTC 59.478 50.000 17.63 0.00 0.00 2.62
5280 11922 0.816018 TGCGTTCGCTTTCCCTTTCA 60.816 50.000 17.63 0.00 0.00 2.69
5281 11923 0.521735 GCGTTCGCTTTCCCTTTCAT 59.478 50.000 9.99 0.00 0.00 2.57
5282 11924 1.729149 GCGTTCGCTTTCCCTTTCATG 60.729 52.381 9.99 0.00 0.00 3.07
5324 11966 8.815912 ACCTTAGAAAATTGGAATGCACTTTAT 58.184 29.630 0.00 0.00 0.00 1.40
5335 11977 9.693739 TTGGAATGCACTTTATTTAGGAGAATA 57.306 29.630 0.00 0.00 0.00 1.75
5343 11985 7.599245 CACTTTATTTAGGAGAATAGGCTACCG 59.401 40.741 0.00 0.00 0.00 4.02
5344 11986 4.538746 ATTTAGGAGAATAGGCTACCGC 57.461 45.455 0.00 0.00 0.00 5.68
5353 11995 0.104855 TAGGCTACCGCAATCAGCAG 59.895 55.000 0.00 0.00 46.13 4.24
5368 12010 1.638467 GCAGGACGCGCTTCTATTG 59.362 57.895 14.02 10.71 0.00 1.90
5372 12014 3.855895 GCAGGACGCGCTTCTATTGTATA 60.856 47.826 14.02 0.00 0.00 1.47
5373 12015 4.486090 CAGGACGCGCTTCTATTGTATAT 58.514 43.478 14.02 0.00 0.00 0.86
5424 12075 9.780186 TTTTATTCGGGGTTTGAAAACAATAAT 57.220 25.926 8.11 4.87 40.63 1.28
5431 12082 6.702282 GGGGTTTGAAAACAATAATCGAACAA 59.298 34.615 8.11 0.00 40.63 2.83
5432 12083 7.306925 GGGGTTTGAAAACAATAATCGAACAAC 60.307 37.037 8.11 1.00 40.63 3.32
5448 12099 6.978338 TCGAACAACAGAAGTTATCAGTACT 58.022 36.000 0.00 0.00 35.85 2.73
5453 12104 3.119101 ACAGAAGTTATCAGTACTGCGGG 60.119 47.826 18.45 3.39 0.00 6.13
5469 12120 1.818674 GCGGGTGAATGAATCCACTTT 59.181 47.619 0.00 0.00 33.99 2.66
5470 12121 2.415893 GCGGGTGAATGAATCCACTTTG 60.416 50.000 0.00 0.00 33.99 2.77
5472 12123 3.255642 CGGGTGAATGAATCCACTTTGTT 59.744 43.478 0.00 0.00 33.99 2.83
5473 12124 4.615912 CGGGTGAATGAATCCACTTTGTTC 60.616 45.833 0.00 0.00 33.99 3.18
5474 12125 4.524328 GGGTGAATGAATCCACTTTGTTCT 59.476 41.667 0.00 0.00 33.99 3.01
5475 12126 5.011023 GGGTGAATGAATCCACTTTGTTCTT 59.989 40.000 0.00 0.00 33.99 2.52
5476 12127 5.922544 GGTGAATGAATCCACTTTGTTCTTG 59.077 40.000 0.00 0.00 33.99 3.02
5477 12128 5.403466 GTGAATGAATCCACTTTGTTCTTGC 59.597 40.000 0.00 0.00 0.00 4.01
5479 12130 4.998671 TGAATCCACTTTGTTCTTGCAA 57.001 36.364 0.00 0.00 0.00 4.08
5480 12131 4.681744 TGAATCCACTTTGTTCTTGCAAC 58.318 39.130 0.00 0.00 0.00 4.17
5481 12132 4.159321 TGAATCCACTTTGTTCTTGCAACA 59.841 37.500 0.00 0.00 0.00 3.33
5482 12133 4.734398 ATCCACTTTGTTCTTGCAACAA 57.266 36.364 0.00 0.00 38.26 2.83
5495 12146 5.414360 TCTTGCAACAAAAGCATTGTTACA 58.586 33.333 17.04 15.37 42.33 2.41
5502 12153 8.522661 GCAACAAAAGCATTGTTACAAATTTTC 58.477 29.630 17.04 0.00 40.30 2.29
5503 12154 9.008289 CAACAAAAGCATTGTTACAAATTTTCC 57.992 29.630 17.04 0.00 40.30 3.13
5507 12158 7.856145 AAGCATTGTTACAAATTTTCCACAA 57.144 28.000 0.66 7.81 0.00 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.919653 GAGCATTCCACAGCTCGA 57.080 55.556 0.00 0.00 46.53 4.04
5 6 0.403271 AACCTGAGCATTCCACAGCT 59.597 50.000 0.00 0.00 45.25 4.24
6 7 1.251251 AAACCTGAGCATTCCACAGC 58.749 50.000 0.00 0.00 0.00 4.40
7 8 2.229784 GGAAAACCTGAGCATTCCACAG 59.770 50.000 0.00 0.00 40.81 3.66
8 9 2.238521 GGAAAACCTGAGCATTCCACA 58.761 47.619 0.00 0.00 40.81 4.17
9 10 2.229784 CTGGAAAACCTGAGCATTCCAC 59.770 50.000 7.47 0.00 44.71 4.02
10 11 2.517959 CTGGAAAACCTGAGCATTCCA 58.482 47.619 10.16 10.16 46.73 3.53
11 12 1.203287 GCTGGAAAACCTGAGCATTCC 59.797 52.381 0.00 0.00 41.37 3.01
12 13 1.888512 TGCTGGAAAACCTGAGCATTC 59.111 47.619 0.00 0.00 36.54 2.67
13 14 1.891150 CTGCTGGAAAACCTGAGCATT 59.109 47.619 0.00 0.00 40.55 3.56
14 15 1.542492 CTGCTGGAAAACCTGAGCAT 58.458 50.000 0.00 0.00 40.55 3.79
15 16 0.538057 CCTGCTGGAAAACCTGAGCA 60.538 55.000 2.92 0.00 39.11 4.26
16 17 0.538287 ACCTGCTGGAAAACCTGAGC 60.538 55.000 17.64 0.00 37.04 4.26
17 18 1.202806 TGACCTGCTGGAAAACCTGAG 60.203 52.381 17.64 0.00 37.04 3.35
18 19 0.843309 TGACCTGCTGGAAAACCTGA 59.157 50.000 17.64 0.00 37.04 3.86
19 20 1.915141 ATGACCTGCTGGAAAACCTG 58.085 50.000 17.64 0.00 37.04 4.00
20 21 2.375174 TGTATGACCTGCTGGAAAACCT 59.625 45.455 17.64 0.00 37.04 3.50
21 22 2.790433 TGTATGACCTGCTGGAAAACC 58.210 47.619 17.64 1.89 37.04 3.27
22 23 5.048083 TCAAATGTATGACCTGCTGGAAAAC 60.048 40.000 17.64 9.02 37.04 2.43
23 24 5.076182 TCAAATGTATGACCTGCTGGAAAA 58.924 37.500 17.64 1.40 37.04 2.29
24 25 4.661222 TCAAATGTATGACCTGCTGGAAA 58.339 39.130 17.64 4.04 37.04 3.13
25 26 4.299586 TCAAATGTATGACCTGCTGGAA 57.700 40.909 17.64 4.42 37.04 3.53
26 27 3.998913 TCAAATGTATGACCTGCTGGA 57.001 42.857 17.64 0.00 37.04 3.86
27 28 4.260907 CGATTCAAATGTATGACCTGCTGG 60.261 45.833 8.29 8.29 39.83 4.85
28 29 4.787563 GCGATTCAAATGTATGACCTGCTG 60.788 45.833 0.00 0.00 0.00 4.41
29 30 3.313526 GCGATTCAAATGTATGACCTGCT 59.686 43.478 0.00 0.00 0.00 4.24
30 31 3.621794 GCGATTCAAATGTATGACCTGC 58.378 45.455 0.00 0.00 0.00 4.85
31 32 3.846023 GCGCGATTCAAATGTATGACCTG 60.846 47.826 12.10 0.00 0.00 4.00
32 33 2.287915 GCGCGATTCAAATGTATGACCT 59.712 45.455 12.10 0.00 0.00 3.85
33 34 2.639751 GCGCGATTCAAATGTATGACC 58.360 47.619 12.10 0.00 0.00 4.02
34 35 2.289654 CGCGCGATTCAAATGTATGAC 58.710 47.619 28.94 0.00 0.00 3.06
35 36 1.260297 CCGCGCGATTCAAATGTATGA 59.740 47.619 34.63 0.00 0.00 2.15
36 37 1.662360 CCGCGCGATTCAAATGTATG 58.338 50.000 34.63 5.25 0.00 2.39
37 38 0.041312 GCCGCGCGATTCAAATGTAT 60.041 50.000 34.63 0.00 0.00 2.29
38 39 1.350319 GCCGCGCGATTCAAATGTA 59.650 52.632 34.63 0.00 0.00 2.29
39 40 2.100216 GCCGCGCGATTCAAATGT 59.900 55.556 34.63 0.00 0.00 2.71
51 52 3.118454 AACATTGAGTCCGCCGCG 61.118 61.111 5.59 5.59 0.00 6.46
52 53 1.017177 TACAACATTGAGTCCGCCGC 61.017 55.000 0.00 0.00 0.00 6.53
53 54 0.999406 CTACAACATTGAGTCCGCCG 59.001 55.000 0.00 0.00 0.00 6.46
54 55 0.727398 GCTACAACATTGAGTCCGCC 59.273 55.000 0.00 0.00 0.00 6.13
55 56 0.727398 GGCTACAACATTGAGTCCGC 59.273 55.000 0.00 0.00 0.00 5.54
56 57 2.093973 AGAGGCTACAACATTGAGTCCG 60.094 50.000 0.00 0.00 0.00 4.79
57 58 3.618690 AGAGGCTACAACATTGAGTCC 57.381 47.619 0.00 0.00 0.00 3.85
58 59 5.725362 ACTAAGAGGCTACAACATTGAGTC 58.275 41.667 0.00 0.00 0.00 3.36
59 60 5.746990 ACTAAGAGGCTACAACATTGAGT 57.253 39.130 0.00 0.00 0.00 3.41
60 61 7.440523 AAAACTAAGAGGCTACAACATTGAG 57.559 36.000 0.00 0.00 0.00 3.02
61 62 7.606456 CCTAAAACTAAGAGGCTACAACATTGA 59.394 37.037 0.00 0.00 0.00 2.57
62 63 7.390718 ACCTAAAACTAAGAGGCTACAACATTG 59.609 37.037 0.00 0.00 33.28 2.82
63 64 7.459234 ACCTAAAACTAAGAGGCTACAACATT 58.541 34.615 0.00 0.00 33.28 2.71
64 65 7.017319 ACCTAAAACTAAGAGGCTACAACAT 57.983 36.000 0.00 0.00 33.28 2.71
65 66 6.429521 ACCTAAAACTAAGAGGCTACAACA 57.570 37.500 0.00 0.00 33.28 3.33
66 67 7.443272 TGAAACCTAAAACTAAGAGGCTACAAC 59.557 37.037 0.00 0.00 33.28 3.32
67 68 7.511268 TGAAACCTAAAACTAAGAGGCTACAA 58.489 34.615 0.00 0.00 33.28 2.41
68 69 7.069877 TGAAACCTAAAACTAAGAGGCTACA 57.930 36.000 0.00 0.00 33.28 2.74
69 70 6.092396 GCTGAAACCTAAAACTAAGAGGCTAC 59.908 42.308 0.00 0.00 33.28 3.58
70 71 6.013639 AGCTGAAACCTAAAACTAAGAGGCTA 60.014 38.462 0.00 0.00 33.28 3.93
71 72 5.004448 GCTGAAACCTAAAACTAAGAGGCT 58.996 41.667 0.00 0.00 33.28 4.58
72 73 5.004448 AGCTGAAACCTAAAACTAAGAGGC 58.996 41.667 0.00 0.00 33.28 4.70
73 74 5.348997 CGAGCTGAAACCTAAAACTAAGAGG 59.651 44.000 0.00 0.00 36.36 3.69
74 75 6.089685 GTCGAGCTGAAACCTAAAACTAAGAG 59.910 42.308 0.00 0.00 0.00 2.85
75 76 5.924825 GTCGAGCTGAAACCTAAAACTAAGA 59.075 40.000 0.00 0.00 0.00 2.10
76 77 5.694910 TGTCGAGCTGAAACCTAAAACTAAG 59.305 40.000 0.00 0.00 0.00 2.18
77 78 5.603596 TGTCGAGCTGAAACCTAAAACTAA 58.396 37.500 0.00 0.00 0.00 2.24
78 79 5.204409 TGTCGAGCTGAAACCTAAAACTA 57.796 39.130 0.00 0.00 0.00 2.24
79 80 4.067972 TGTCGAGCTGAAACCTAAAACT 57.932 40.909 0.00 0.00 0.00 2.66
80 81 6.478588 CATATGTCGAGCTGAAACCTAAAAC 58.521 40.000 0.00 0.00 0.00 2.43
81 82 5.064707 GCATATGTCGAGCTGAAACCTAAAA 59.935 40.000 4.29 0.00 0.00 1.52
82 83 4.570772 GCATATGTCGAGCTGAAACCTAAA 59.429 41.667 4.29 0.00 0.00 1.85
83 84 4.119862 GCATATGTCGAGCTGAAACCTAA 58.880 43.478 4.29 0.00 0.00 2.69
84 85 3.492656 GGCATATGTCGAGCTGAAACCTA 60.493 47.826 4.29 0.00 0.00 3.08
85 86 2.555199 GCATATGTCGAGCTGAAACCT 58.445 47.619 4.29 0.00 0.00 3.50
86 87 1.599542 GGCATATGTCGAGCTGAAACC 59.400 52.381 4.29 0.00 0.00 3.27
87 88 2.555199 AGGCATATGTCGAGCTGAAAC 58.445 47.619 4.29 0.00 0.00 2.78
88 89 2.938451 CAAGGCATATGTCGAGCTGAAA 59.062 45.455 4.29 0.00 0.00 2.69
89 90 2.168313 TCAAGGCATATGTCGAGCTGAA 59.832 45.455 4.29 0.00 0.00 3.02
90 91 1.756538 TCAAGGCATATGTCGAGCTGA 59.243 47.619 4.29 2.81 0.00 4.26
91 92 2.133553 CTCAAGGCATATGTCGAGCTG 58.866 52.381 4.29 0.43 0.00 4.24
92 93 2.034878 TCTCAAGGCATATGTCGAGCT 58.965 47.619 4.29 0.00 0.00 4.09
93 94 2.131183 GTCTCAAGGCATATGTCGAGC 58.869 52.381 4.29 0.00 0.00 5.03
94 95 3.443099 TGTCTCAAGGCATATGTCGAG 57.557 47.619 4.29 5.30 0.00 4.04
95 96 3.430790 CCTTGTCTCAAGGCATATGTCGA 60.431 47.826 14.29 0.00 0.00 4.20
96 97 2.868583 CCTTGTCTCAAGGCATATGTCG 59.131 50.000 14.29 0.00 0.00 4.35
105 106 2.958355 TCAAAAAGGCCTTGTCTCAAGG 59.042 45.455 21.33 20.24 40.39 3.61
106 107 3.551659 GCTCAAAAAGGCCTTGTCTCAAG 60.552 47.826 21.33 12.91 0.00 3.02
107 108 2.362077 GCTCAAAAAGGCCTTGTCTCAA 59.638 45.455 21.33 2.02 0.00 3.02
108 109 1.956477 GCTCAAAAAGGCCTTGTCTCA 59.044 47.619 21.33 0.00 0.00 3.27
109 110 1.956477 TGCTCAAAAAGGCCTTGTCTC 59.044 47.619 21.33 7.24 0.00 3.36
110 111 1.959282 CTGCTCAAAAAGGCCTTGTCT 59.041 47.619 21.33 0.00 0.00 3.41
111 112 1.683385 ACTGCTCAAAAAGGCCTTGTC 59.317 47.619 21.33 1.36 0.00 3.18
112 113 1.410153 CACTGCTCAAAAAGGCCTTGT 59.590 47.619 21.33 11.66 0.00 3.16
113 114 1.682854 TCACTGCTCAAAAAGGCCTTG 59.317 47.619 21.33 7.84 0.00 3.61
114 115 1.959282 CTCACTGCTCAAAAAGGCCTT 59.041 47.619 13.78 13.78 0.00 4.35
115 116 1.613836 CTCACTGCTCAAAAAGGCCT 58.386 50.000 0.00 0.00 0.00 5.19
116 117 0.038801 GCTCACTGCTCAAAAAGGCC 60.039 55.000 0.00 0.00 38.95 5.19
117 118 0.670162 TGCTCACTGCTCAAAAAGGC 59.330 50.000 0.00 0.00 43.37 4.35
118 119 1.000938 GGTGCTCACTGCTCAAAAAGG 60.001 52.381 0.00 0.00 43.37 3.11
119 120 1.952296 AGGTGCTCACTGCTCAAAAAG 59.048 47.619 0.00 0.00 43.37 2.27
120 121 2.057137 AGGTGCTCACTGCTCAAAAA 57.943 45.000 0.00 0.00 43.37 1.94
121 122 2.158827 TGTAGGTGCTCACTGCTCAAAA 60.159 45.455 0.00 0.00 43.37 2.44
122 123 1.416030 TGTAGGTGCTCACTGCTCAAA 59.584 47.619 0.00 0.00 43.37 2.69
123 124 1.047801 TGTAGGTGCTCACTGCTCAA 58.952 50.000 0.00 0.00 43.37 3.02
124 125 1.269958 ATGTAGGTGCTCACTGCTCA 58.730 50.000 0.00 0.00 43.37 4.26
125 126 3.742433 ATATGTAGGTGCTCACTGCTC 57.258 47.619 0.00 0.00 43.37 4.26
126 127 4.219115 AGTATATGTAGGTGCTCACTGCT 58.781 43.478 0.00 0.00 43.37 4.24
127 128 4.279671 AGAGTATATGTAGGTGCTCACTGC 59.720 45.833 0.00 0.00 43.25 4.40
128 129 5.767269 CAGAGTATATGTAGGTGCTCACTG 58.233 45.833 0.00 0.00 30.64 3.66
129 130 4.279671 GCAGAGTATATGTAGGTGCTCACT 59.720 45.833 0.00 0.00 30.64 3.41
130 131 4.279671 AGCAGAGTATATGTAGGTGCTCAC 59.720 45.833 0.00 0.00 34.79 3.51
131 132 4.474394 AGCAGAGTATATGTAGGTGCTCA 58.526 43.478 0.00 0.00 34.79 4.26
132 133 5.461032 AAGCAGAGTATATGTAGGTGCTC 57.539 43.478 0.00 0.00 38.81 4.26
133 134 5.600484 AGAAAGCAGAGTATATGTAGGTGCT 59.400 40.000 0.00 0.00 41.45 4.40
134 135 5.848406 AGAAAGCAGAGTATATGTAGGTGC 58.152 41.667 0.00 0.00 0.00 5.01
135 136 9.988815 ATTAAGAAAGCAGAGTATATGTAGGTG 57.011 33.333 0.00 0.00 0.00 4.00
155 156 9.485206 GTCCACTCTGTTTTACACTAATTAAGA 57.515 33.333 0.00 0.00 0.00 2.10
156 157 9.268268 TGTCCACTCTGTTTTACACTAATTAAG 57.732 33.333 0.00 0.00 0.00 1.85
157 158 9.616156 TTGTCCACTCTGTTTTACACTAATTAA 57.384 29.630 0.00 0.00 0.00 1.40
158 159 9.048446 GTTGTCCACTCTGTTTTACACTAATTA 57.952 33.333 0.00 0.00 0.00 1.40
159 160 7.773690 AGTTGTCCACTCTGTTTTACACTAATT 59.226 33.333 0.00 0.00 0.00 1.40
160 161 7.280356 AGTTGTCCACTCTGTTTTACACTAAT 58.720 34.615 0.00 0.00 0.00 1.73
161 162 6.646267 AGTTGTCCACTCTGTTTTACACTAA 58.354 36.000 0.00 0.00 0.00 2.24
162 163 6.229936 AGTTGTCCACTCTGTTTTACACTA 57.770 37.500 0.00 0.00 0.00 2.74
163 164 5.099042 AGTTGTCCACTCTGTTTTACACT 57.901 39.130 0.00 0.00 0.00 3.55
164 165 5.123344 ACAAGTTGTCCACTCTGTTTTACAC 59.877 40.000 1.64 0.00 32.94 2.90
165 166 5.123186 CACAAGTTGTCCACTCTGTTTTACA 59.877 40.000 5.27 0.00 32.94 2.41
166 167 5.353123 TCACAAGTTGTCCACTCTGTTTTAC 59.647 40.000 5.27 0.00 32.94 2.01
167 168 5.492895 TCACAAGTTGTCCACTCTGTTTTA 58.507 37.500 5.27 0.00 32.94 1.52
168 169 4.331968 TCACAAGTTGTCCACTCTGTTTT 58.668 39.130 5.27 0.00 32.94 2.43
169 170 3.941483 CTCACAAGTTGTCCACTCTGTTT 59.059 43.478 5.27 0.00 32.94 2.83
170 171 3.535561 CTCACAAGTTGTCCACTCTGTT 58.464 45.455 5.27 0.00 32.94 3.16
171 172 2.743183 GCTCACAAGTTGTCCACTCTGT 60.743 50.000 5.27 0.00 32.94 3.41
172 173 1.869767 GCTCACAAGTTGTCCACTCTG 59.130 52.381 5.27 0.00 32.94 3.35
173 174 1.486310 TGCTCACAAGTTGTCCACTCT 59.514 47.619 5.27 0.00 32.94 3.24
174 175 1.953559 TGCTCACAAGTTGTCCACTC 58.046 50.000 5.27 0.00 32.94 3.51
175 176 2.418368 TTGCTCACAAGTTGTCCACT 57.582 45.000 5.27 0.00 37.30 4.00
176 177 2.287788 CCATTGCTCACAAGTTGTCCAC 60.288 50.000 5.27 0.00 39.69 4.02
177 178 1.955778 CCATTGCTCACAAGTTGTCCA 59.044 47.619 5.27 1.01 39.69 4.02
178 179 1.956477 ACCATTGCTCACAAGTTGTCC 59.044 47.619 5.27 0.00 39.69 4.02
179 180 2.618241 TCACCATTGCTCACAAGTTGTC 59.382 45.455 5.27 0.00 39.69 3.18
180 181 2.620115 CTCACCATTGCTCACAAGTTGT 59.380 45.455 1.64 1.64 39.69 3.32
181 182 2.030540 CCTCACCATTGCTCACAAGTTG 60.031 50.000 0.00 0.00 39.69 3.16
182 183 2.233271 CCTCACCATTGCTCACAAGTT 58.767 47.619 0.00 0.00 39.69 2.66
183 184 1.901591 CCTCACCATTGCTCACAAGT 58.098 50.000 0.00 0.00 39.69 3.16
184 185 0.524862 GCCTCACCATTGCTCACAAG 59.475 55.000 0.00 0.00 39.69 3.16
185 186 1.236616 CGCCTCACCATTGCTCACAA 61.237 55.000 0.00 0.00 40.87 3.33
186 187 1.672030 CGCCTCACCATTGCTCACA 60.672 57.895 0.00 0.00 0.00 3.58
187 188 0.745845 ATCGCCTCACCATTGCTCAC 60.746 55.000 0.00 0.00 0.00 3.51
188 189 0.745486 CATCGCCTCACCATTGCTCA 60.745 55.000 0.00 0.00 0.00 4.26
189 190 0.745845 ACATCGCCTCACCATTGCTC 60.746 55.000 0.00 0.00 0.00 4.26
190 191 1.028330 CACATCGCCTCACCATTGCT 61.028 55.000 0.00 0.00 0.00 3.91
191 192 1.430632 CACATCGCCTCACCATTGC 59.569 57.895 0.00 0.00 0.00 3.56
192 193 1.307355 TGCACATCGCCTCACCATTG 61.307 55.000 0.00 0.00 41.33 2.82
193 194 0.394762 ATGCACATCGCCTCACCATT 60.395 50.000 0.00 0.00 41.33 3.16
194 195 1.099295 CATGCACATCGCCTCACCAT 61.099 55.000 0.00 0.00 41.33 3.55
195 196 1.746239 CATGCACATCGCCTCACCA 60.746 57.895 0.00 0.00 41.33 4.17
196 197 3.104766 CATGCACATCGCCTCACC 58.895 61.111 0.00 0.00 41.33 4.02
197 198 2.406401 GCATGCACATCGCCTCAC 59.594 61.111 14.21 0.00 41.33 3.51
198 199 2.825387 GGCATGCACATCGCCTCA 60.825 61.111 21.36 0.00 42.78 3.86
199 200 2.191513 ATGGCATGCACATCGCCTC 61.192 57.895 21.36 0.00 46.39 4.70
200 201 2.124024 ATGGCATGCACATCGCCT 60.124 55.556 21.36 0.00 46.39 5.52
201 202 2.027024 CATGGCATGCACATCGCC 59.973 61.111 21.36 10.52 46.43 5.54
202 203 1.587876 CACATGGCATGCACATCGC 60.588 57.895 26.70 0.64 42.89 4.58
203 204 0.452585 TTCACATGGCATGCACATCG 59.547 50.000 26.70 15.45 0.00 3.84
204 205 2.658373 TTTCACATGGCATGCACATC 57.342 45.000 26.70 1.89 0.00 3.06
205 206 3.620427 ATTTTCACATGGCATGCACAT 57.380 38.095 26.70 16.96 0.00 3.21
206 207 3.404224 AATTTTCACATGGCATGCACA 57.596 38.095 26.70 15.35 0.00 4.57
207 208 4.746729 TCTAATTTTCACATGGCATGCAC 58.253 39.130 26.70 9.64 0.00 4.57
208 209 5.047164 AGTTCTAATTTTCACATGGCATGCA 60.047 36.000 26.70 11.42 0.00 3.96
209 210 5.413499 AGTTCTAATTTTCACATGGCATGC 58.587 37.500 26.70 9.90 0.00 4.06
210 211 7.894376 AAAGTTCTAATTTTCACATGGCATG 57.106 32.000 25.31 25.31 0.00 4.06
211 212 7.933033 ACAAAAGTTCTAATTTTCACATGGCAT 59.067 29.630 0.00 0.00 0.00 4.40
212 213 7.271511 ACAAAAGTTCTAATTTTCACATGGCA 58.728 30.769 0.00 0.00 0.00 4.92
213 214 7.437862 TGACAAAAGTTCTAATTTTCACATGGC 59.562 33.333 0.00 0.00 0.00 4.40
214 215 8.755018 GTGACAAAAGTTCTAATTTTCACATGG 58.245 33.333 0.00 0.00 32.76 3.66
215 216 9.299963 TGTGACAAAAGTTCTAATTTTCACATG 57.700 29.630 12.12 0.00 34.93 3.21
216 217 9.520204 CTGTGACAAAAGTTCTAATTTTCACAT 57.480 29.630 14.51 0.00 36.77 3.21
217 218 8.735315 TCTGTGACAAAAGTTCTAATTTTCACA 58.265 29.630 13.92 13.92 36.02 3.58
218 219 9.567848 TTCTGTGACAAAAGTTCTAATTTTCAC 57.432 29.630 0.00 0.00 32.92 3.18
221 222 9.921637 TGTTTCTGTGACAAAAGTTCTAATTTT 57.078 25.926 0.00 0.00 0.00 1.82
223 224 9.736023 GATGTTTCTGTGACAAAAGTTCTAATT 57.264 29.630 0.00 0.00 0.00 1.40
224 225 8.902806 TGATGTTTCTGTGACAAAAGTTCTAAT 58.097 29.630 0.00 0.00 0.00 1.73
225 226 8.181573 GTGATGTTTCTGTGACAAAAGTTCTAA 58.818 33.333 0.00 0.00 0.00 2.10
226 227 7.201696 GGTGATGTTTCTGTGACAAAAGTTCTA 60.202 37.037 0.00 0.00 0.00 2.10
227 228 6.404734 GGTGATGTTTCTGTGACAAAAGTTCT 60.405 38.462 0.00 0.00 0.00 3.01
228 229 5.743872 GGTGATGTTTCTGTGACAAAAGTTC 59.256 40.000 0.00 0.00 0.00 3.01
229 230 5.394115 GGGTGATGTTTCTGTGACAAAAGTT 60.394 40.000 0.00 0.00 0.00 2.66
230 231 4.097892 GGGTGATGTTTCTGTGACAAAAGT 59.902 41.667 0.00 0.00 0.00 2.66
231 232 4.610945 GGGTGATGTTTCTGTGACAAAAG 58.389 43.478 0.00 0.00 0.00 2.27
232 233 3.066064 CGGGTGATGTTTCTGTGACAAAA 59.934 43.478 0.00 0.00 0.00 2.44
233 234 2.616376 CGGGTGATGTTTCTGTGACAAA 59.384 45.455 0.00 0.00 0.00 2.83
234 235 2.217750 CGGGTGATGTTTCTGTGACAA 58.782 47.619 0.00 0.00 0.00 3.18
235 236 1.877637 CGGGTGATGTTTCTGTGACA 58.122 50.000 0.00 0.00 0.00 3.58
236 237 0.517316 GCGGGTGATGTTTCTGTGAC 59.483 55.000 0.00 0.00 0.00 3.67
237 238 0.107643 TGCGGGTGATGTTTCTGTGA 59.892 50.000 0.00 0.00 0.00 3.58
238 239 0.950836 TTGCGGGTGATGTTTCTGTG 59.049 50.000 0.00 0.00 0.00 3.66
239 240 1.238439 CTTGCGGGTGATGTTTCTGT 58.762 50.000 0.00 0.00 0.00 3.41
240 241 1.238439 ACTTGCGGGTGATGTTTCTG 58.762 50.000 0.00 0.00 0.00 3.02
241 242 2.851263 TACTTGCGGGTGATGTTTCT 57.149 45.000 0.00 0.00 0.00 2.52
242 243 3.006940 TGATACTTGCGGGTGATGTTTC 58.993 45.455 0.00 0.00 0.00 2.78
243 244 3.009723 CTGATACTTGCGGGTGATGTTT 58.990 45.455 0.00 0.00 0.00 2.83
244 245 2.027192 ACTGATACTTGCGGGTGATGTT 60.027 45.455 0.00 0.00 0.00 2.71
245 246 1.555075 ACTGATACTTGCGGGTGATGT 59.445 47.619 0.00 0.00 0.00 3.06
246 247 2.315925 ACTGATACTTGCGGGTGATG 57.684 50.000 0.00 0.00 0.00 3.07
247 248 2.236146 TCAACTGATACTTGCGGGTGAT 59.764 45.455 0.00 0.00 33.62 3.06
248 249 1.621317 TCAACTGATACTTGCGGGTGA 59.379 47.619 0.00 0.00 36.07 4.02
249 250 2.093306 TCAACTGATACTTGCGGGTG 57.907 50.000 0.00 0.00 0.00 4.61
250 251 3.350219 AATCAACTGATACTTGCGGGT 57.650 42.857 0.00 0.00 33.73 5.28
251 252 4.701956 AAAATCAACTGATACTTGCGGG 57.298 40.909 0.00 0.00 33.73 6.13
252 253 4.324402 GCAAAAATCAACTGATACTTGCGG 59.676 41.667 16.62 0.00 39.85 5.69
253 254 4.324402 GGCAAAAATCAACTGATACTTGCG 59.676 41.667 20.96 6.35 44.58 4.85
254 255 5.473039 AGGCAAAAATCAACTGATACTTGC 58.527 37.500 20.27 20.27 43.82 4.01
255 256 6.917533 AGAGGCAAAAATCAACTGATACTTG 58.082 36.000 8.37 8.37 33.73 3.16
256 257 7.530426 AAGAGGCAAAAATCAACTGATACTT 57.470 32.000 0.00 0.00 33.73 2.24
257 258 7.373493 CAAAGAGGCAAAAATCAACTGATACT 58.627 34.615 0.00 0.00 33.73 2.12
258 259 6.587608 CCAAAGAGGCAAAAATCAACTGATAC 59.412 38.462 0.00 0.00 33.73 2.24
259 260 6.690530 CCAAAGAGGCAAAAATCAACTGATA 58.309 36.000 0.00 0.00 33.73 2.15
260 261 5.544650 CCAAAGAGGCAAAAATCAACTGAT 58.455 37.500 0.00 0.00 36.07 2.90
261 262 4.947645 CCAAAGAGGCAAAAATCAACTGA 58.052 39.130 0.00 0.00 0.00 3.41
281 282 4.527944 TCGTATGATTAAATTGGTGGCCA 58.472 39.130 0.00 0.00 0.00 5.36
282 283 5.508200 TTCGTATGATTAAATTGGTGGCC 57.492 39.130 0.00 0.00 0.00 5.36
283 284 9.691362 ATATTTTCGTATGATTAAATTGGTGGC 57.309 29.630 1.01 0.00 0.00 5.01
339 340 9.810870 ACCATATACAAACTGGTAAAAAGGTTA 57.189 29.630 0.00 0.00 41.43 2.85
340 341 8.715190 ACCATATACAAACTGGTAAAAAGGTT 57.285 30.769 0.00 0.00 41.43 3.50
341 342 9.457436 CTACCATATACAAACTGGTAAAAAGGT 57.543 33.333 4.22 0.00 43.14 3.50
342 343 9.675464 TCTACCATATACAAACTGGTAAAAAGG 57.325 33.333 4.22 0.00 43.14 3.11
370 371 5.048782 GCATATGGCCATCGATGTAGAAAAA 60.049 40.000 24.80 0.00 36.11 1.94
371 372 4.455533 GCATATGGCCATCGATGTAGAAAA 59.544 41.667 24.80 0.00 36.11 2.29
372 373 4.002982 GCATATGGCCATCGATGTAGAAA 58.997 43.478 24.80 0.00 36.11 2.52
373 374 3.261643 AGCATATGGCCATCGATGTAGAA 59.738 43.478 24.80 0.46 46.50 2.10
374 375 2.833943 AGCATATGGCCATCGATGTAGA 59.166 45.455 24.80 1.36 46.50 2.59
375 376 2.934553 CAGCATATGGCCATCGATGTAG 59.065 50.000 24.80 13.57 46.50 2.74
376 377 2.566724 TCAGCATATGGCCATCGATGTA 59.433 45.455 24.80 3.19 46.50 2.29
377 378 1.348696 TCAGCATATGGCCATCGATGT 59.651 47.619 24.80 9.30 46.50 3.06
378 379 2.103537 TCAGCATATGGCCATCGATG 57.896 50.000 24.80 22.78 46.50 3.84
379 380 2.039480 AGTTCAGCATATGGCCATCGAT 59.961 45.455 24.80 11.14 46.50 3.59
380 381 1.417517 AGTTCAGCATATGGCCATCGA 59.582 47.619 24.80 5.96 46.50 3.59
381 382 1.888215 AGTTCAGCATATGGCCATCG 58.112 50.000 24.80 16.22 46.50 3.84
382 383 4.277515 TCTAGTTCAGCATATGGCCATC 57.722 45.455 24.80 8.35 46.50 3.51
383 384 4.622457 CGATCTAGTTCAGCATATGGCCAT 60.622 45.833 24.45 24.45 46.50 4.40
384 385 3.306294 CGATCTAGTTCAGCATATGGCCA 60.306 47.826 8.56 8.56 46.50 5.36
385 386 3.056536 TCGATCTAGTTCAGCATATGGCC 60.057 47.826 4.56 0.00 46.50 5.36
386 387 4.172505 CTCGATCTAGTTCAGCATATGGC 58.827 47.826 4.56 0.00 45.30 4.40
387 388 4.172505 GCTCGATCTAGTTCAGCATATGG 58.827 47.826 4.56 0.00 0.00 2.74
388 389 4.802999 TGCTCGATCTAGTTCAGCATATG 58.197 43.478 17.00 0.00 35.17 1.78
389 390 5.242615 TCTTGCTCGATCTAGTTCAGCATAT 59.757 40.000 19.54 0.00 39.76 1.78
390 391 4.580580 TCTTGCTCGATCTAGTTCAGCATA 59.419 41.667 19.54 12.82 39.76 3.14
391 392 3.382865 TCTTGCTCGATCTAGTTCAGCAT 59.617 43.478 19.54 0.00 39.76 3.79
392 393 2.755103 TCTTGCTCGATCTAGTTCAGCA 59.245 45.455 17.00 17.00 38.32 4.41
393 394 3.066064 TCTCTTGCTCGATCTAGTTCAGC 59.934 47.826 13.75 13.75 0.00 4.26
394 395 4.891627 TCTCTTGCTCGATCTAGTTCAG 57.108 45.455 1.89 0.28 0.00 3.02
395 396 4.884164 TCATCTCTTGCTCGATCTAGTTCA 59.116 41.667 1.89 0.00 0.00 3.18
396 397 5.212194 GTCATCTCTTGCTCGATCTAGTTC 58.788 45.833 0.00 0.00 0.00 3.01
397 398 4.642437 TGTCATCTCTTGCTCGATCTAGTT 59.358 41.667 0.00 0.00 0.00 2.24
398 399 4.203226 TGTCATCTCTTGCTCGATCTAGT 58.797 43.478 0.00 0.00 0.00 2.57
399 400 4.827304 TGTCATCTCTTGCTCGATCTAG 57.173 45.455 0.00 0.00 0.00 2.43
400 401 5.106908 CGTATGTCATCTCTTGCTCGATCTA 60.107 44.000 0.00 0.00 0.00 1.98
401 402 4.320129 CGTATGTCATCTCTTGCTCGATCT 60.320 45.833 0.00 0.00 0.00 2.75
402 403 3.911365 CGTATGTCATCTCTTGCTCGATC 59.089 47.826 0.00 0.00 0.00 3.69
403 404 3.855154 GCGTATGTCATCTCTTGCTCGAT 60.855 47.826 0.00 0.00 0.00 3.59
404 405 2.541794 GCGTATGTCATCTCTTGCTCGA 60.542 50.000 0.00 0.00 0.00 4.04
405 406 1.783711 GCGTATGTCATCTCTTGCTCG 59.216 52.381 0.00 0.00 0.00 5.03
406 407 2.793790 CTGCGTATGTCATCTCTTGCTC 59.206 50.000 0.00 0.00 0.00 4.26
407 408 2.167281 ACTGCGTATGTCATCTCTTGCT 59.833 45.455 0.00 0.00 0.00 3.91
408 409 2.544685 ACTGCGTATGTCATCTCTTGC 58.455 47.619 0.00 0.00 0.00 4.01
409 410 5.582550 TCTTACTGCGTATGTCATCTCTTG 58.417 41.667 0.00 0.00 0.00 3.02
410 411 5.836821 TCTTACTGCGTATGTCATCTCTT 57.163 39.130 0.00 0.00 0.00 2.85
411 412 7.013369 TGTTATCTTACTGCGTATGTCATCTCT 59.987 37.037 0.00 0.00 0.00 3.10
412 413 7.139392 TGTTATCTTACTGCGTATGTCATCTC 58.861 38.462 0.00 0.00 0.00 2.75
413 414 7.039313 TGTTATCTTACTGCGTATGTCATCT 57.961 36.000 0.00 0.00 0.00 2.90
414 415 7.595130 TGATGTTATCTTACTGCGTATGTCATC 59.405 37.037 0.00 0.00 0.00 2.92
415 416 7.433680 TGATGTTATCTTACTGCGTATGTCAT 58.566 34.615 0.00 0.00 0.00 3.06
416 417 6.801575 TGATGTTATCTTACTGCGTATGTCA 58.198 36.000 0.00 0.00 0.00 3.58
417 418 7.694388 TTGATGTTATCTTACTGCGTATGTC 57.306 36.000 0.00 0.00 0.00 3.06
418 419 7.926018 TCATTGATGTTATCTTACTGCGTATGT 59.074 33.333 0.00 0.00 0.00 2.29
419 420 8.298030 TCATTGATGTTATCTTACTGCGTATG 57.702 34.615 0.00 0.00 0.00 2.39
420 421 8.887036 TTCATTGATGTTATCTTACTGCGTAT 57.113 30.769 0.00 0.00 0.00 3.06
421 422 8.764287 CATTCATTGATGTTATCTTACTGCGTA 58.236 33.333 0.00 0.00 0.00 4.42
422 423 7.633621 CATTCATTGATGTTATCTTACTGCGT 58.366 34.615 0.00 0.00 0.00 5.24
423 424 6.576313 GCATTCATTGATGTTATCTTACTGCG 59.424 38.462 0.00 0.00 0.00 5.18
424 425 7.420002 TGCATTCATTGATGTTATCTTACTGC 58.580 34.615 0.00 0.00 0.00 4.40
425 426 9.394477 CATGCATTCATTGATGTTATCTTACTG 57.606 33.333 0.00 0.00 0.00 2.74
426 427 9.128404 ACATGCATTCATTGATGTTATCTTACT 57.872 29.630 0.00 0.00 0.00 2.24
429 430 8.071967 CGTACATGCATTCATTGATGTTATCTT 58.928 33.333 0.00 0.00 32.22 2.40
430 431 7.308169 CCGTACATGCATTCATTGATGTTATCT 60.308 37.037 0.00 0.00 32.22 1.98
431 432 6.798476 CCGTACATGCATTCATTGATGTTATC 59.202 38.462 0.00 0.00 32.22 1.75
432 433 6.262944 ACCGTACATGCATTCATTGATGTTAT 59.737 34.615 0.00 0.00 32.22 1.89
433 434 5.588246 ACCGTACATGCATTCATTGATGTTA 59.412 36.000 0.00 0.00 32.22 2.41
434 435 4.398988 ACCGTACATGCATTCATTGATGTT 59.601 37.500 0.00 0.00 32.22 2.71
435 436 3.947196 ACCGTACATGCATTCATTGATGT 59.053 39.130 0.00 0.00 33.52 3.06
436 437 4.556942 ACCGTACATGCATTCATTGATG 57.443 40.909 0.00 0.00 0.00 3.07
437 438 5.125257 TCAAACCGTACATGCATTCATTGAT 59.875 36.000 0.00 0.00 0.00 2.57
438 439 4.457257 TCAAACCGTACATGCATTCATTGA 59.543 37.500 0.00 0.00 0.00 2.57
439 440 4.731720 TCAAACCGTACATGCATTCATTG 58.268 39.130 0.00 0.00 0.00 2.82
440 441 5.384063 TTCAAACCGTACATGCATTCATT 57.616 34.783 0.00 0.00 0.00 2.57
441 442 5.125257 TCATTCAAACCGTACATGCATTCAT 59.875 36.000 0.00 0.00 0.00 2.57
442 443 4.457257 TCATTCAAACCGTACATGCATTCA 59.543 37.500 0.00 0.00 0.00 2.57
443 444 4.980590 TCATTCAAACCGTACATGCATTC 58.019 39.130 0.00 0.00 0.00 2.67
444 445 5.048083 AGTTCATTCAAACCGTACATGCATT 60.048 36.000 0.00 0.00 0.00 3.56
445 446 4.458989 AGTTCATTCAAACCGTACATGCAT 59.541 37.500 0.00 0.00 0.00 3.96
446 447 3.818210 AGTTCATTCAAACCGTACATGCA 59.182 39.130 0.00 0.00 0.00 3.96
447 448 4.419522 AGTTCATTCAAACCGTACATGC 57.580 40.909 0.00 0.00 0.00 4.06
448 449 5.121611 TGCTAGTTCATTCAAACCGTACATG 59.878 40.000 0.00 0.00 0.00 3.21
449 450 5.242434 TGCTAGTTCATTCAAACCGTACAT 58.758 37.500 0.00 0.00 0.00 2.29
450 451 4.633175 TGCTAGTTCATTCAAACCGTACA 58.367 39.130 0.00 0.00 0.00 2.90
451 452 5.178809 ACTTGCTAGTTCATTCAAACCGTAC 59.821 40.000 0.00 0.00 0.00 3.67
452 453 5.302360 ACTTGCTAGTTCATTCAAACCGTA 58.698 37.500 0.00 0.00 0.00 4.02
453 454 4.134563 ACTTGCTAGTTCATTCAAACCGT 58.865 39.130 0.00 0.00 0.00 4.83
454 455 4.749245 ACTTGCTAGTTCATTCAAACCG 57.251 40.909 0.00 0.00 0.00 4.44
455 456 5.831997 ACAACTTGCTAGTTCATTCAAACC 58.168 37.500 10.73 0.00 42.67 3.27
456 457 8.850454 TTAACAACTTGCTAGTTCATTCAAAC 57.150 30.769 10.73 0.00 42.67 2.93
463 464 8.564574 CCTGTAATTTAACAACTTGCTAGTTCA 58.435 33.333 10.73 2.42 42.67 3.18
464 465 8.565416 ACCTGTAATTTAACAACTTGCTAGTTC 58.435 33.333 10.73 0.00 42.67 3.01
465 466 8.459911 ACCTGTAATTTAACAACTTGCTAGTT 57.540 30.769 7.78 7.78 45.40 2.24
466 467 7.937394 AGACCTGTAATTTAACAACTTGCTAGT 59.063 33.333 0.00 0.00 35.68 2.57
467 468 8.230486 CAGACCTGTAATTTAACAACTTGCTAG 58.770 37.037 0.00 0.00 0.00 3.42
468 469 7.308348 GCAGACCTGTAATTTAACAACTTGCTA 60.308 37.037 0.00 0.00 0.00 3.49
469 470 6.515035 GCAGACCTGTAATTTAACAACTTGCT 60.515 38.462 0.00 0.00 0.00 3.91
470 471 5.629435 GCAGACCTGTAATTTAACAACTTGC 59.371 40.000 0.00 0.00 0.00 4.01
471 472 6.734137 TGCAGACCTGTAATTTAACAACTTG 58.266 36.000 0.00 0.00 0.00 3.16
472 473 6.952773 TGCAGACCTGTAATTTAACAACTT 57.047 33.333 0.00 0.00 0.00 2.66
473 474 6.128282 CGATGCAGACCTGTAATTTAACAACT 60.128 38.462 0.00 0.00 0.00 3.16
474 475 6.021596 CGATGCAGACCTGTAATTTAACAAC 58.978 40.000 0.00 0.00 0.00 3.32
475 476 5.935206 TCGATGCAGACCTGTAATTTAACAA 59.065 36.000 0.00 0.00 0.00 2.83
476 477 5.483811 TCGATGCAGACCTGTAATTTAACA 58.516 37.500 0.00 0.00 0.00 2.41
477 478 6.480320 AGATCGATGCAGACCTGTAATTTAAC 59.520 38.462 0.54 0.00 0.00 2.01
478 479 6.479990 CAGATCGATGCAGACCTGTAATTTAA 59.520 38.462 0.54 0.00 0.00 1.52
479 480 5.985530 CAGATCGATGCAGACCTGTAATTTA 59.014 40.000 0.54 0.00 0.00 1.40
480 481 4.813161 CAGATCGATGCAGACCTGTAATTT 59.187 41.667 0.54 0.00 0.00 1.82
481 482 4.141846 ACAGATCGATGCAGACCTGTAATT 60.142 41.667 12.10 0.00 33.65 1.40
482 483 3.386078 ACAGATCGATGCAGACCTGTAAT 59.614 43.478 12.10 0.00 33.65 1.89
483 484 2.760650 ACAGATCGATGCAGACCTGTAA 59.239 45.455 12.10 0.00 33.65 2.41
484 485 2.379005 ACAGATCGATGCAGACCTGTA 58.621 47.619 12.10 0.00 33.65 2.74
485 486 1.189752 ACAGATCGATGCAGACCTGT 58.810 50.000 0.54 5.96 0.00 4.00
486 487 2.736978 GTACAGATCGATGCAGACCTG 58.263 52.381 0.54 5.24 0.00 4.00
487 488 1.335182 CGTACAGATCGATGCAGACCT 59.665 52.381 0.54 0.00 0.00 3.85
488 489 1.600663 CCGTACAGATCGATGCAGACC 60.601 57.143 0.54 0.00 0.00 3.85
489 490 1.333931 TCCGTACAGATCGATGCAGAC 59.666 52.381 0.54 0.00 0.00 3.51
490 491 1.604278 CTCCGTACAGATCGATGCAGA 59.396 52.381 0.54 0.00 0.00 4.26
491 492 1.928152 GCTCCGTACAGATCGATGCAG 60.928 57.143 0.54 0.00 0.00 4.41
492 493 0.030773 GCTCCGTACAGATCGATGCA 59.969 55.000 0.54 0.00 0.00 3.96
493 494 0.030773 TGCTCCGTACAGATCGATGC 59.969 55.000 0.54 0.00 0.00 3.91
494 495 1.600663 GGTGCTCCGTACAGATCGATG 60.601 57.143 0.54 0.00 0.00 3.84
495 496 0.669077 GGTGCTCCGTACAGATCGAT 59.331 55.000 0.00 0.00 0.00 3.59
496 497 2.104267 GGTGCTCCGTACAGATCGA 58.896 57.895 0.00 0.00 0.00 3.59
497 498 4.711980 GGTGCTCCGTACAGATCG 57.288 61.111 0.00 0.00 0.00 3.69
508 509 4.481112 CAAATGCCGGCGGTGCTC 62.481 66.667 28.82 11.33 0.00 4.26
510 511 4.776647 GACAAATGCCGGCGGTGC 62.777 66.667 28.82 14.83 0.00 5.01
511 512 4.459331 CGACAAATGCCGGCGGTG 62.459 66.667 28.82 21.04 0.00 4.94
512 513 3.969250 ATCGACAAATGCCGGCGGT 62.969 57.895 28.82 17.17 0.00 5.68
513 514 3.202001 ATCGACAAATGCCGGCGG 61.202 61.111 24.35 24.35 0.00 6.13
514 515 1.425267 TACATCGACAAATGCCGGCG 61.425 55.000 23.90 10.06 0.00 6.46
515 516 0.027586 GTACATCGACAAATGCCGGC 59.972 55.000 22.73 22.73 0.00 6.13
516 517 0.300491 CGTACATCGACAAATGCCGG 59.700 55.000 0.00 0.00 42.86 6.13
517 518 0.300491 CCGTACATCGACAAATGCCG 59.700 55.000 0.00 0.00 42.86 5.69
518 519 1.593006 CTCCGTACATCGACAAATGCC 59.407 52.381 0.00 0.00 42.86 4.40
519 520 1.593006 CCTCCGTACATCGACAAATGC 59.407 52.381 0.00 0.00 42.86 3.56
520 521 2.159156 TCCCTCCGTACATCGACAAATG 60.159 50.000 0.00 0.00 42.86 2.32
521 522 2.104967 TCCCTCCGTACATCGACAAAT 58.895 47.619 0.00 0.00 42.86 2.32
522 523 1.548081 TCCCTCCGTACATCGACAAA 58.452 50.000 0.00 0.00 42.86 2.83
523 524 1.548081 TTCCCTCCGTACATCGACAA 58.452 50.000 0.00 0.00 42.86 3.18
524 525 1.548081 TTTCCCTCCGTACATCGACA 58.452 50.000 0.00 0.00 42.86 4.35
525 526 2.864343 CAATTTCCCTCCGTACATCGAC 59.136 50.000 0.00 0.00 42.86 4.20
526 527 2.498481 ACAATTTCCCTCCGTACATCGA 59.502 45.455 0.00 0.00 42.86 3.59
527 528 2.901249 ACAATTTCCCTCCGTACATCG 58.099 47.619 0.00 0.00 39.52 3.84
528 529 6.746745 TTTAACAATTTCCCTCCGTACATC 57.253 37.500 0.00 0.00 0.00 3.06
529 530 6.490721 TGTTTTAACAATTTCCCTCCGTACAT 59.509 34.615 0.00 0.00 35.67 2.29
530 531 5.826737 TGTTTTAACAATTTCCCTCCGTACA 59.173 36.000 0.00 0.00 35.67 2.90
531 532 6.144854 GTGTTTTAACAATTTCCCTCCGTAC 58.855 40.000 0.00 0.00 41.21 3.67
532 533 5.826737 TGTGTTTTAACAATTTCCCTCCGTA 59.173 36.000 0.00 0.00 41.21 4.02
533 534 4.645588 TGTGTTTTAACAATTTCCCTCCGT 59.354 37.500 0.00 0.00 41.21 4.69
534 535 5.189659 TGTGTTTTAACAATTTCCCTCCG 57.810 39.130 0.00 0.00 41.21 4.63
535 536 5.983118 CACTGTGTTTTAACAATTTCCCTCC 59.017 40.000 0.00 0.00 41.21 4.30
536 537 5.983118 CCACTGTGTTTTAACAATTTCCCTC 59.017 40.000 7.08 0.00 41.21 4.30
537 538 5.659079 TCCACTGTGTTTTAACAATTTCCCT 59.341 36.000 7.08 0.00 41.21 4.20
538 539 5.908341 TCCACTGTGTTTTAACAATTTCCC 58.092 37.500 7.08 0.00 41.21 3.97
539 540 7.262048 TCTTCCACTGTGTTTTAACAATTTCC 58.738 34.615 7.08 0.00 41.21 3.13
540 541 8.755018 CATCTTCCACTGTGTTTTAACAATTTC 58.245 33.333 7.08 0.00 41.21 2.17
541 542 8.474025 TCATCTTCCACTGTGTTTTAACAATTT 58.526 29.630 7.08 0.00 41.21 1.82
542 543 8.006298 TCATCTTCCACTGTGTTTTAACAATT 57.994 30.769 7.08 0.00 41.21 2.32
543 544 7.581213 TCATCTTCCACTGTGTTTTAACAAT 57.419 32.000 7.08 0.00 41.21 2.71
544 545 7.581213 ATCATCTTCCACTGTGTTTTAACAA 57.419 32.000 7.08 0.00 41.21 2.83
545 546 7.095397 CGTATCATCTTCCACTGTGTTTTAACA 60.095 37.037 7.08 0.00 36.38 2.41
546 547 7.234384 CGTATCATCTTCCACTGTGTTTTAAC 58.766 38.462 7.08 0.00 0.00 2.01
547 548 6.128391 GCGTATCATCTTCCACTGTGTTTTAA 60.128 38.462 7.08 0.00 0.00 1.52
548 549 5.350365 GCGTATCATCTTCCACTGTGTTTTA 59.650 40.000 7.08 0.00 0.00 1.52
549 550 4.154195 GCGTATCATCTTCCACTGTGTTTT 59.846 41.667 7.08 0.00 0.00 2.43
550 551 3.684788 GCGTATCATCTTCCACTGTGTTT 59.315 43.478 7.08 0.00 0.00 2.83
551 552 3.055819 AGCGTATCATCTTCCACTGTGTT 60.056 43.478 7.08 0.00 0.00 3.32
552 553 2.497675 AGCGTATCATCTTCCACTGTGT 59.502 45.455 7.08 0.00 0.00 3.72
553 554 2.862536 CAGCGTATCATCTTCCACTGTG 59.137 50.000 0.00 0.00 0.00 3.66
561 562 1.407618 TGTACGGCAGCGTATCATCTT 59.592 47.619 0.00 0.00 0.00 2.40
562 563 1.001268 CTGTACGGCAGCGTATCATCT 60.001 52.381 0.00 0.00 38.52 2.90
645 648 1.620822 TTCCCTCTTTGGAGCTTTGC 58.379 50.000 0.00 0.00 38.21 3.68
666 669 9.271828 CTTGAATGCTAACCCTTGTTAATTTTT 57.728 29.630 0.00 0.00 36.54 1.94
667 670 8.428852 ACTTGAATGCTAACCCTTGTTAATTTT 58.571 29.630 0.00 0.00 36.54 1.82
729 772 2.340078 GGCTCACGCACTGACAGA 59.660 61.111 10.08 0.00 38.10 3.41
788 837 5.058490 GCACAGTACTTGTTACCCACTTTA 58.942 41.667 0.00 0.00 38.16 1.85
841 890 0.691413 TGTGTGTACTGTGTGGGGGA 60.691 55.000 0.00 0.00 0.00 4.81
846 895 3.316588 AGAGAGAGTGTGTGTACTGTGTG 59.683 47.826 0.00 0.00 0.00 3.82
888 937 3.120792 GAGAGTGTGTGTAGTCGCAAAA 58.879 45.455 0.00 0.00 35.78 2.44
890 939 1.954382 AGAGAGTGTGTGTAGTCGCAA 59.046 47.619 0.00 0.00 35.78 4.85
892 941 1.807742 AGAGAGAGTGTGTGTAGTCGC 59.192 52.381 0.00 0.00 0.00 5.19
893 942 3.749088 AGAAGAGAGAGTGTGTGTAGTCG 59.251 47.826 0.00 0.00 0.00 4.18
895 944 4.076394 GGAGAAGAGAGAGTGTGTGTAGT 58.924 47.826 0.00 0.00 0.00 2.73
899 2407 1.548269 GGGGAGAAGAGAGAGTGTGTG 59.452 57.143 0.00 0.00 0.00 3.82
904 2412 2.584965 TCAGATGGGGAGAAGAGAGAGT 59.415 50.000 0.00 0.00 0.00 3.24
905 2413 3.225104 CTCAGATGGGGAGAAGAGAGAG 58.775 54.545 0.00 0.00 34.24 3.20
917 2427 5.233988 GGAGATTTTATCGACTCAGATGGG 58.766 45.833 0.00 0.00 32.39 4.00
924 2434 4.680567 GCTAACCGGAGATTTTATCGACTC 59.319 45.833 9.46 0.00 0.00 3.36
1135 2681 0.037232 CCGGTGTTGGAGAAGAGGAC 60.037 60.000 0.00 0.00 0.00 3.85
1155 2701 1.094073 TGGAGTAGTCGTAGAGGCGC 61.094 60.000 0.00 0.00 36.95 6.53
1254 2889 4.941873 GTCTCCCAAATTAGTTTGACGGAT 59.058 41.667 11.94 0.00 46.03 4.18
1275 2910 3.515901 ACACTCCCAAGTAAGAGGATGTC 59.484 47.826 0.00 0.00 33.25 3.06
1279 2914 6.323996 CACATATACACTCCCAAGTAAGAGGA 59.676 42.308 0.00 0.00 33.25 3.71
1427 3351 4.502645 CGTTTTGTGTGGAATGAAGAAACC 59.497 41.667 0.00 0.00 0.00 3.27
1453 3377 9.713713 GTTCTTATTCTCTCCTTGAAAACTAGT 57.286 33.333 0.00 0.00 0.00 2.57
1495 3422 9.852091 ATGCTAATCAAGAAACAAAAAGATCTC 57.148 29.630 0.00 0.00 0.00 2.75
1567 3504 5.408299 AGGAAAGCAAAATATCGCCAAAAAC 59.592 36.000 0.00 0.00 0.00 2.43
1584 3521 1.003108 GCTCTGCGAAGTAGGAAAGC 58.997 55.000 0.00 0.00 41.75 3.51
1787 3749 7.436118 ACTTGTGAATGCATCAACAAATAACT 58.564 30.769 21.07 5.90 40.50 2.24
1887 3871 8.607459 GCATATCAATTATCACTAGGTATGCAC 58.393 37.037 10.19 0.00 40.72 4.57
1997 5469 4.455877 ACATTGTTACTAGTGCAAGAAGCC 59.544 41.667 5.39 0.00 44.83 4.35
2011 5490 7.867445 CCACAAAGGTATTTCACATTGTTAC 57.133 36.000 0.00 0.00 36.90 2.50
2075 5555 8.609617 ATGTGATTCGGGGATAATATAGAGAA 57.390 34.615 0.00 0.00 0.00 2.87
2076 5556 8.609617 AATGTGATTCGGGGATAATATAGAGA 57.390 34.615 0.00 0.00 0.00 3.10
2092 5576 9.319143 AGTCATAAGTACTTGCTAATGTGATTC 57.681 33.333 18.56 4.83 0.00 2.52
2179 5692 4.589908 ACTTGGTTGGTATCTTGGATGAC 58.410 43.478 0.00 0.00 0.00 3.06
2287 5844 9.933723 GGTTTCTGTAGTATTGTCCTAGTTTTA 57.066 33.333 0.00 0.00 0.00 1.52
2334 5894 9.915629 AAATATTATAAGCTCGTAGACAAGGAG 57.084 33.333 0.00 0.00 41.99 3.69
2557 6754 7.136703 TGGCACAATGAACATGAGCTATGTAT 61.137 38.462 0.00 0.00 42.60 2.29
2570 6767 3.489738 GCTATCCATGTGGCACAATGAAC 60.490 47.826 25.95 13.09 44.16 3.18
2576 6773 1.682740 CATGCTATCCATGTGGCACA 58.317 50.000 24.36 24.36 45.05 4.57
2599 6796 3.525199 AGGGTGACTTAATTGGAGATGCT 59.475 43.478 0.00 0.00 0.00 3.79
2634 6860 8.286800 CACGATTCTTACTGTTAATTTTCACCA 58.713 33.333 0.00 0.00 0.00 4.17
2697 6923 3.537580 TGGAAATGACCGTACTAATGGC 58.462 45.455 0.00 0.00 34.84 4.40
2705 6931 3.035363 TGGCTATCTGGAAATGACCGTA 58.965 45.455 0.00 0.00 0.00 4.02
2742 6968 1.656587 TTGCAAGGGAGAGCTAGGAA 58.343 50.000 0.00 0.00 0.00 3.36
2743 6969 1.885049 ATTGCAAGGGAGAGCTAGGA 58.115 50.000 4.94 0.00 0.00 2.94
2760 6986 5.646692 TCCTAGATCCCCGATGAAAAATT 57.353 39.130 0.00 0.00 0.00 1.82
2769 6995 0.769247 TCGTGATCCTAGATCCCCGA 59.231 55.000 10.54 10.54 0.00 5.14
2827 8010 6.705825 TGTGTAAGATGTTGGGAATGATATCG 59.294 38.462 0.00 0.00 0.00 2.92
2870 8053 4.036852 CGATCTAGTGCCTTAGACATCACA 59.963 45.833 0.00 0.00 32.78 3.58
2952 8146 5.003160 TGGTGGAACAGTGAATTAGTCATG 58.997 41.667 0.00 0.00 41.80 3.07
2956 8150 6.976934 AATTTGGTGGAACAGTGAATTAGT 57.023 33.333 0.00 0.00 41.80 2.24
3280 8502 8.671921 CATAATCTGAGTATGAATAATGCACCC 58.328 37.037 17.64 0.00 31.71 4.61
3305 8531 1.129624 GTGCAAAGTGTGTTGTCGTCA 59.870 47.619 0.00 0.00 0.00 4.35
3308 8534 3.878086 ATAGTGCAAAGTGTGTTGTCG 57.122 42.857 0.00 0.00 0.00 4.35
3311 8537 5.997732 GCAATATAGTGCAAAGTGTGTTG 57.002 39.130 19.67 0.00 44.29 3.33
3495 8723 5.966742 AAAAGTGATGAAACTAAGGGAGC 57.033 39.130 0.00 0.00 0.00 4.70
3516 8744 2.914214 GTCATGCGCGCAAAGATAAAAA 59.086 40.909 39.68 10.93 0.00 1.94
3546 8774 6.091169 GGACATTGCCTTTCATTGTACAATTG 59.909 38.462 18.50 12.83 38.90 2.32
3696 9076 4.223923 CAGTTGACTCTCTAAACCCCTCAT 59.776 45.833 0.00 0.00 0.00 2.90
3712 9092 4.829064 TGTATGCTTGTTTCCAGTTGAC 57.171 40.909 0.00 0.00 0.00 3.18
3764 9151 5.874093 ATCTCAACAATGAGGTCAAGAACT 58.126 37.500 6.04 0.00 43.75 3.01
3843 9264 4.993705 TCATAAGTTGGTCCTGGAAAGT 57.006 40.909 0.00 0.00 0.00 2.66
3916 9342 6.375418 TGTAATATGGTGGTAGTACCTAGCA 58.625 40.000 20.07 19.56 41.30 3.49
3955 9393 4.392754 CCTGCAATTCAAAAACATTAGGCC 59.607 41.667 0.00 0.00 0.00 5.19
4106 9560 8.647796 TGGATTGAGTACTCTTTTAAACTCTCA 58.352 33.333 23.01 4.45 39.27 3.27
4205 9665 1.001633 GTCCCGTTTACTTCTGCCTCA 59.998 52.381 0.00 0.00 0.00 3.86
4292 9758 2.356432 CCTTTCTGCATGGTCTGGATGA 60.356 50.000 0.00 0.00 0.00 2.92
4330 9796 0.910566 ACCGTACCCCAGCATTGGTA 60.911 55.000 0.00 0.00 43.40 3.25
4336 9802 1.058284 AACTTTACCGTACCCCAGCA 58.942 50.000 0.00 0.00 0.00 4.41
4452 9951 4.866508 AAATCAGTCAGTTGGTAGTCGA 57.133 40.909 0.00 0.00 0.00 4.20
4453 9952 8.697846 TTTATAAATCAGTCAGTTGGTAGTCG 57.302 34.615 0.00 0.00 0.00 4.18
4486 9992 8.407832 GCCAGTCCTTGTAGTAAAAACTTTTAA 58.592 33.333 0.00 0.00 34.71 1.52
4496 10002 1.927487 TCGGCCAGTCCTTGTAGTAA 58.073 50.000 2.24 0.00 0.00 2.24
4511 10025 2.376808 ATCAATCCTCGATCATCGGC 57.623 50.000 7.33 0.00 40.88 5.54
4513 10027 3.801050 GGCATATCAATCCTCGATCATCG 59.199 47.826 0.00 0.00 42.10 3.84
4531 10050 5.012354 ACTTGATTTGGAACAGAATTGGCAT 59.988 36.000 0.00 0.00 42.39 4.40
4660 10197 8.682710 GGGATTCAACAAGCAATACTGTATTTA 58.317 33.333 10.25 0.00 0.00 1.40
4673 10210 0.101219 GCATCCGGGATTCAACAAGC 59.899 55.000 6.84 1.97 0.00 4.01
4759 10332 5.063180 TCGTAATCTCGCAGAAGGTTTTA 57.937 39.130 0.00 0.00 34.09 1.52
4779 10352 8.765219 CAACTTCCTTGAAATATATGGTACTCG 58.235 37.037 0.00 0.00 30.42 4.18
4788 10361 8.553153 TGGTATGGACAACTTCCTTGAAATATA 58.447 33.333 0.00 0.00 46.10 0.86
4791 10364 5.640147 TGGTATGGACAACTTCCTTGAAAT 58.360 37.500 0.00 0.00 46.10 2.17
4792 10365 5.055265 TGGTATGGACAACTTCCTTGAAA 57.945 39.130 0.00 0.00 46.10 2.69
4793 10366 4.506625 CCTGGTATGGACAACTTCCTTGAA 60.507 45.833 0.00 0.00 46.10 2.69
4805 10379 0.322456 TGCAGCAACCTGGTATGGAC 60.322 55.000 0.00 0.00 39.54 4.02
4826 10406 8.489559 GGTTTTCCGTTCAAATAAAATGGTAAC 58.510 33.333 0.00 0.00 34.87 2.50
4844 10424 2.303175 TGTTGGAGGAAAGGTTTTCCG 58.697 47.619 13.31 0.00 46.35 4.30
4914 10495 0.460811 GTTCCGTTTAGCTACCCCGG 60.461 60.000 15.41 15.41 39.98 5.73
4915 10496 0.247185 TGTTCCGTTTAGCTACCCCG 59.753 55.000 0.00 0.00 0.00 5.73
4943 10524 2.796976 TGCGCGTACATTATGTTGTG 57.203 45.000 8.43 4.93 0.00 3.33
4947 10528 4.608073 TTTTCATGCGCGTACATTATGT 57.392 36.364 8.43 2.58 0.00 2.29
4969 10734 8.690884 TGAGAAAGTCTATCGATCTTCTTTCAT 58.309 33.333 29.07 21.27 41.42 2.57
4990 10755 8.729756 CATGTGTTAATTAGAACCATGTGAGAA 58.270 33.333 10.97 0.00 35.50 2.87
5004 10769 6.262049 ACAAGTGCACTGTCATGTGTTAATTA 59.738 34.615 22.49 0.00 39.89 1.40
5005 10770 5.067674 ACAAGTGCACTGTCATGTGTTAATT 59.932 36.000 22.49 0.00 39.89 1.40
5006 10771 4.580167 ACAAGTGCACTGTCATGTGTTAAT 59.420 37.500 22.49 0.00 39.89 1.40
5007 10772 3.944650 ACAAGTGCACTGTCATGTGTTAA 59.055 39.130 22.49 0.00 39.89 2.01
5059 10824 5.990996 AGCATCAGTTGGTAAAACAATTTGG 59.009 36.000 0.78 0.00 33.29 3.28
5094 10859 3.374764 TGTACCATAGCATGTGACCTCT 58.625 45.455 0.00 0.00 0.00 3.69
5141 10906 3.670991 GCTCGAGCTGTTCTTATATTCGG 59.329 47.826 29.88 0.00 38.21 4.30
5206 10973 8.902540 AGTTATTTGTTATGGCGATAGATTCA 57.097 30.769 0.00 0.00 39.76 2.57
5222 10989 8.956533 AGGCAACACAAAAATTAGTTATTTGT 57.043 26.923 0.38 0.38 45.39 2.83
5228 10995 7.175816 ACCAAAAAGGCAACACAAAAATTAGTT 59.824 29.630 0.00 0.00 43.14 2.24
5230 10997 7.082700 ACCAAAAAGGCAACACAAAAATTAG 57.917 32.000 0.00 0.00 43.14 1.73
5232 10999 5.474876 TGACCAAAAAGGCAACACAAAAATT 59.525 32.000 0.00 0.00 43.14 1.82
5235 11865 4.008074 TGACCAAAAAGGCAACACAAAA 57.992 36.364 0.00 0.00 43.14 2.44
5238 11868 2.676463 GCTTGACCAAAAAGGCAACACA 60.676 45.455 0.00 0.00 43.14 3.72
5242 11872 2.836262 CATGCTTGACCAAAAAGGCAA 58.164 42.857 0.00 0.00 43.14 4.52
5251 11881 2.965147 GCGAACGCATGCTTGACCA 61.965 57.895 17.13 0.00 41.49 4.02
5258 11888 2.200170 AAGGGAAAGCGAACGCATGC 62.200 55.000 20.66 7.91 44.88 4.06
5261 11891 0.816018 TGAAAGGGAAAGCGAACGCA 60.816 50.000 20.66 0.00 44.88 5.24
5273 11915 2.755103 GGTTTAGTGCTCCATGAAAGGG 59.245 50.000 0.00 0.00 40.85 3.95
5274 11916 3.191371 GTGGTTTAGTGCTCCATGAAAGG 59.809 47.826 0.00 0.00 33.68 3.11
5275 11917 3.820467 TGTGGTTTAGTGCTCCATGAAAG 59.180 43.478 0.00 0.00 33.68 2.62
5276 11918 3.826524 TGTGGTTTAGTGCTCCATGAAA 58.173 40.909 0.00 0.00 33.68 2.69
5277 11919 3.500448 TGTGGTTTAGTGCTCCATGAA 57.500 42.857 0.00 0.00 33.68 2.57
5278 11920 3.146066 GTTGTGGTTTAGTGCTCCATGA 58.854 45.455 0.00 0.00 33.68 3.07
5279 11921 2.228822 GGTTGTGGTTTAGTGCTCCATG 59.771 50.000 0.00 0.00 33.68 3.66
5280 11922 2.108250 AGGTTGTGGTTTAGTGCTCCAT 59.892 45.455 0.00 0.00 33.68 3.41
5281 11923 1.493022 AGGTTGTGGTTTAGTGCTCCA 59.507 47.619 0.00 0.00 0.00 3.86
5282 11924 2.271944 AGGTTGTGGTTTAGTGCTCC 57.728 50.000 0.00 0.00 0.00 4.70
5324 11966 3.302161 TGCGGTAGCCTATTCTCCTAAA 58.698 45.455 0.00 0.00 44.33 1.85
5335 11977 1.153289 CTGCTGATTGCGGTAGCCT 60.153 57.895 0.00 0.00 46.63 4.58
5343 11985 4.527157 GCGCGTCCTGCTGATTGC 62.527 66.667 8.43 0.00 43.27 3.56
5344 11986 2.301902 GAAGCGCGTCCTGCTGATTG 62.302 60.000 12.67 0.00 43.14 2.67
5353 11995 5.840940 AAATATACAATAGAAGCGCGTCC 57.159 39.130 19.90 4.10 0.00 4.79
5401 12043 7.120873 TCGATTATTGTTTTCAAACCCCGAATA 59.879 33.333 0.00 0.00 43.39 1.75
5402 12044 6.071840 TCGATTATTGTTTTCAAACCCCGAAT 60.072 34.615 0.00 0.00 43.39 3.34
5403 12045 5.241064 TCGATTATTGTTTTCAAACCCCGAA 59.759 36.000 0.00 0.00 43.39 4.30
5404 12046 4.760715 TCGATTATTGTTTTCAAACCCCGA 59.239 37.500 0.00 0.00 43.39 5.14
5408 12050 8.121167 TGTTGTTCGATTATTGTTTTCAAACC 57.879 30.769 0.00 0.00 43.39 3.27
5409 12051 9.015577 TCTGTTGTTCGATTATTGTTTTCAAAC 57.984 29.630 0.00 0.00 43.39 2.93
5413 12064 8.782533 ACTTCTGTTGTTCGATTATTGTTTTC 57.217 30.769 0.00 0.00 0.00 2.29
5424 12075 6.861572 CAGTACTGATAACTTCTGTTGTTCGA 59.138 38.462 18.45 0.00 37.63 3.71
5431 12082 3.119101 CCCGCAGTACTGATAACTTCTGT 60.119 47.826 27.08 0.00 39.55 3.41
5432 12083 3.119101 ACCCGCAGTACTGATAACTTCTG 60.119 47.826 27.08 3.22 0.00 3.02
5441 12092 1.262417 TCATTCACCCGCAGTACTGA 58.738 50.000 27.08 3.70 0.00 3.41
5446 12097 0.327924 TGGATTCATTCACCCGCAGT 59.672 50.000 0.00 0.00 0.00 4.40
5448 12099 0.327924 AGTGGATTCATTCACCCGCA 59.672 50.000 0.00 0.00 34.67 5.69
5453 12104 5.403466 GCAAGAACAAAGTGGATTCATTCAC 59.597 40.000 0.00 0.00 0.00 3.18
5469 12120 4.252073 ACAATGCTTTTGTTGCAAGAACA 58.748 34.783 8.78 4.59 44.01 3.18
5470 12121 4.863152 ACAATGCTTTTGTTGCAAGAAC 57.137 36.364 8.78 0.00 44.01 3.01
5472 12123 5.414360 TGTAACAATGCTTTTGTTGCAAGA 58.586 33.333 23.43 0.00 46.52 3.02
5473 12124 5.715429 TGTAACAATGCTTTTGTTGCAAG 57.285 34.783 23.43 0.00 46.52 4.01
5476 12127 7.967771 AAATTTGTAACAATGCTTTTGTTGC 57.032 28.000 21.22 20.23 42.05 4.17
5477 12128 9.008289 GGAAAATTTGTAACAATGCTTTTGTTG 57.992 29.630 21.22 6.68 42.05 3.33
5479 12130 8.180920 GTGGAAAATTTGTAACAATGCTTTTGT 58.819 29.630 0.00 0.47 0.00 2.83
5480 12131 8.180267 TGTGGAAAATTTGTAACAATGCTTTTG 58.820 29.630 0.00 0.00 0.00 2.44
5481 12132 8.273780 TGTGGAAAATTTGTAACAATGCTTTT 57.726 26.923 0.00 0.00 0.00 2.27
5482 12133 7.856145 TGTGGAAAATTTGTAACAATGCTTT 57.144 28.000 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.