Multiple sequence alignment - TraesCS1D01G044900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G044900 chr1D 100.000 2753 0 0 1 2753 24159732 24156980 0.000000e+00 5084.0
1 TraesCS1D01G044900 chr1D 89.858 424 27 5 319 734 93500870 93501285 5.220000e-147 531.0
2 TraesCS1D01G044900 chr1D 91.329 173 11 3 607 776 110983252 110983423 1.650000e-57 233.0
3 TraesCS1D01G044900 chr1D 91.124 169 11 3 607 772 157783578 157783745 2.760000e-55 226.0
4 TraesCS1D01G044900 chr1D 90.698 172 13 2 607 775 295284246 295284075 2.760000e-55 226.0
5 TraesCS1D01G044900 chr1D 91.124 169 12 2 607 772 414928102 414928270 2.760000e-55 226.0
6 TraesCS1D01G044900 chr1D 76.735 245 39 12 2476 2707 234425855 234425616 1.340000e-23 121.0
7 TraesCS1D01G044900 chr1B 87.156 1308 107 37 773 2045 39706581 39705300 0.000000e+00 1428.0
8 TraesCS1D01G044900 chr1A 89.831 1062 76 16 772 1830 25289943 25288911 0.000000e+00 1334.0
9 TraesCS1D01G044900 chr1A 95.294 85 4 0 226 310 25296396 25296312 4.780000e-28 135.0
10 TraesCS1D01G044900 chr1A 93.827 81 5 0 2673 2753 25288878 25288798 3.720000e-24 122.0
11 TraesCS1D01G044900 chr5A 83.587 591 74 15 2149 2728 455641337 455641915 1.450000e-147 532.0
12 TraesCS1D01G044900 chr5A 72.345 452 81 23 2280 2703 435705465 435705030 4.850000e-18 102.0
13 TraesCS1D01G044900 chr5D 82.680 612 81 12 2149 2752 300873419 300872825 1.130000e-143 520.0
14 TraesCS1D01G044900 chr5D 95.500 200 8 1 409 607 121102461 121102660 4.420000e-83 318.0
15 TraesCS1D01G044900 chr5D 95.918 196 6 1 418 611 449617235 449617430 1.590000e-82 316.0
16 TraesCS1D01G044900 chr5D 94.175 206 11 1 417 622 399953473 399953677 2.060000e-81 313.0
17 TraesCS1D01G044900 chr5D 92.398 171 10 2 607 774 105860492 105860662 9.850000e-60 241.0
18 TraesCS1D01G044900 chr5D 91.124 169 12 2 607 772 277564964 277564796 2.760000e-55 226.0
19 TraesCS1D01G044900 chr4D 87.869 305 30 7 2425 2728 121173601 121173899 4.360000e-93 351.0
20 TraesCS1D01G044900 chr4D 94.581 203 8 2 407 607 218122826 218123027 7.400000e-81 311.0
21 TraesCS1D01G044900 chr4D 89.944 179 13 4 607 782 307364665 307364489 2.760000e-55 226.0
22 TraesCS1D01G044900 chr3D 97.340 188 5 0 424 611 71527736 71527549 1.230000e-83 320.0
23 TraesCS1D01G044900 chr3D 93.636 110 7 0 317 426 69857867 69857976 6.100000e-37 165.0
24 TraesCS1D01G044900 chr3D 82.524 103 18 0 1526 1628 514852556 514852658 1.050000e-14 91.6
25 TraesCS1D01G044900 chr2D 97.354 189 3 2 423 610 389280227 389280414 1.230000e-83 320.0
26 TraesCS1D01G044900 chr2D 96.373 193 7 0 419 611 20189301 20189493 4.420000e-83 318.0
27 TraesCS1D01G044900 chr2D 92.523 214 13 2 424 637 180927870 180927660 1.240000e-78 303.0
28 TraesCS1D01G044900 chr2D 91.379 116 10 0 311 426 409529211 409529326 2.840000e-35 159.0
29 TraesCS1D01G044900 chr2B 92.899 169 9 2 607 772 242229203 242229035 2.740000e-60 243.0
30 TraesCS1D01G044900 chr7D 91.716 169 11 2 607 772 219883364 219883196 5.930000e-57 231.0
31 TraesCS1D01G044900 chr7D 92.793 111 8 0 316 426 53409882 53409992 7.890000e-36 161.0
32 TraesCS1D01G044900 chr7D 93.519 108 7 0 319 426 487289728 487289621 7.890000e-36 161.0
33 TraesCS1D01G044900 chr7D 93.519 108 7 0 319 426 487298011 487297904 7.890000e-36 161.0
34 TraesCS1D01G044900 chr7D 93.519 108 7 0 319 426 487302096 487301989 7.890000e-36 161.0
35 TraesCS1D01G044900 chr7D 73.560 382 65 19 2161 2526 298353594 298353955 2.240000e-21 113.0
36 TraesCS1D01G044900 chr3B 89.873 158 13 2 1597 1753 544922983 544923138 1.670000e-47 200.0
37 TraesCS1D01G044900 chr3B 93.506 77 5 0 1606 1682 544821769 544821845 6.230000e-22 115.0
38 TraesCS1D01G044900 chr3B 83.333 102 15 2 2308 2407 88490823 88490924 2.920000e-15 93.5
39 TraesCS1D01G044900 chr3B 82.524 103 18 0 1526 1628 677290035 677290137 1.050000e-14 91.6
40 TraesCS1D01G044900 chrUn 93.519 108 7 0 319 426 320374370 320374263 7.890000e-36 161.0
41 TraesCS1D01G044900 chrUn 93.519 108 7 0 319 426 320377728 320377621 7.890000e-36 161.0
42 TraesCS1D01G044900 chrUn 92.793 111 8 0 316 426 367346628 367346738 7.890000e-36 161.0
43 TraesCS1D01G044900 chrUn 83.333 102 15 2 2308 2407 21394600 21394701 2.920000e-15 93.5
44 TraesCS1D01G044900 chrUn 71.795 429 86 22 2300 2701 183181854 183182274 3.780000e-14 89.8
45 TraesCS1D01G044900 chrUn 71.759 432 86 22 2300 2703 254879615 254880038 3.780000e-14 89.8
46 TraesCS1D01G044900 chrUn 71.694 431 87 21 2300 2703 339675600 339675178 1.360000e-13 87.9
47 TraesCS1D01G044900 chrUn 94.737 38 2 0 2300 2337 391942766 391942729 2.960000e-05 60.2
48 TraesCS1D01G044900 chrUn 94.737 38 2 0 2300 2337 391960441 391960478 2.960000e-05 60.2
49 TraesCS1D01G044900 chr3A 89.720 107 8 2 1357 1463 534174084 534174187 1.720000e-27 134.0
50 TraesCS1D01G044900 chr3A 82.418 91 16 0 1526 1616 649567768 649567858 2.270000e-11 80.5
51 TraesCS1D01G044900 chr6A 77.049 244 37 13 2476 2706 129249068 129248831 3.720000e-24 122.0
52 TraesCS1D01G044900 chr7B 75.676 222 34 8 2479 2699 354379219 354379017 2.920000e-15 93.5
53 TraesCS1D01G044900 chr4B 83.333 102 15 2 2308 2407 194339067 194339168 2.920000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G044900 chr1D 24156980 24159732 2752 True 5084 5084 100.000 1 2753 1 chr1D.!!$R1 2752
1 TraesCS1D01G044900 chr1B 39705300 39706581 1281 True 1428 1428 87.156 773 2045 1 chr1B.!!$R1 1272
2 TraesCS1D01G044900 chr1A 25288798 25289943 1145 True 728 1334 91.829 772 2753 2 chr1A.!!$R2 1981
3 TraesCS1D01G044900 chr5A 455641337 455641915 578 False 532 532 83.587 2149 2728 1 chr5A.!!$F1 579
4 TraesCS1D01G044900 chr5D 300872825 300873419 594 True 520 520 82.680 2149 2752 1 chr5D.!!$R2 603

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
71 72 0.034896 CACCTACACACTGGGTCCAC 59.965 60.0 0.0 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2046 2084 0.105964 TGTTCCTCCGTTGGACTGTG 59.894 55.0 0.0 0.0 35.58 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.772739 CCAACAGATCGCCCAAGAG 58.227 57.895 0.00 0.00 0.00 2.85
19 20 1.372087 CCAACAGATCGCCCAAGAGC 61.372 60.000 0.00 0.00 0.00 4.09
20 21 0.674581 CAACAGATCGCCCAAGAGCA 60.675 55.000 0.00 0.00 0.00 4.26
21 22 0.674895 AACAGATCGCCCAAGAGCAC 60.675 55.000 0.00 0.00 0.00 4.40
22 23 1.078918 CAGATCGCCCAAGAGCACA 60.079 57.895 0.00 0.00 0.00 4.57
23 24 1.078848 AGATCGCCCAAGAGCACAC 60.079 57.895 0.00 0.00 0.00 3.82
24 25 1.078848 GATCGCCCAAGAGCACACT 60.079 57.895 0.00 0.00 0.00 3.55
25 26 1.364626 GATCGCCCAAGAGCACACTG 61.365 60.000 0.00 0.00 0.00 3.66
26 27 3.730761 CGCCCAAGAGCACACTGC 61.731 66.667 0.00 0.00 45.46 4.40
57 58 2.366435 GGCCTGGCCCTACACCTA 60.366 66.667 27.77 0.00 44.06 3.08
58 59 2.743179 GGCCTGGCCCTACACCTAC 61.743 68.421 27.77 0.00 44.06 3.18
59 60 1.993391 GCCTGGCCCTACACCTACA 60.993 63.158 7.66 0.00 0.00 2.74
60 61 1.905512 CCTGGCCCTACACCTACAC 59.094 63.158 0.00 0.00 0.00 2.90
61 62 0.907704 CCTGGCCCTACACCTACACA 60.908 60.000 0.00 0.00 0.00 3.72
62 63 0.249398 CTGGCCCTACACCTACACAC 59.751 60.000 0.00 0.00 0.00 3.82
63 64 0.178915 TGGCCCTACACCTACACACT 60.179 55.000 0.00 0.00 0.00 3.55
64 65 0.249398 GGCCCTACACCTACACACTG 59.751 60.000 0.00 0.00 0.00 3.66
65 66 0.249398 GCCCTACACCTACACACTGG 59.751 60.000 0.00 0.00 0.00 4.00
66 67 0.902531 CCCTACACCTACACACTGGG 59.097 60.000 0.00 0.00 0.00 4.45
67 68 1.640917 CCTACACCTACACACTGGGT 58.359 55.000 0.00 0.00 0.00 4.51
68 69 1.549170 CCTACACCTACACACTGGGTC 59.451 57.143 0.00 0.00 0.00 4.46
69 70 1.549170 CTACACCTACACACTGGGTCC 59.451 57.143 0.00 0.00 0.00 4.46
70 71 0.399376 ACACCTACACACTGGGTCCA 60.399 55.000 0.00 0.00 0.00 4.02
71 72 0.034896 CACCTACACACTGGGTCCAC 59.965 60.000 0.00 0.00 0.00 4.02
72 73 1.292223 CCTACACACTGGGTCCACG 59.708 63.158 0.00 0.00 0.00 4.94
73 74 1.374252 CTACACACTGGGTCCACGC 60.374 63.158 0.00 0.00 0.00 5.34
74 75 2.094757 CTACACACTGGGTCCACGCA 62.095 60.000 0.00 0.00 37.27 5.24
75 76 2.372040 TACACACTGGGTCCACGCAC 62.372 60.000 0.00 0.00 34.94 5.34
76 77 3.475494 ACACTGGGTCCACGCACA 61.475 61.111 0.00 0.00 34.94 4.57
77 78 2.972505 CACTGGGTCCACGCACAC 60.973 66.667 0.00 0.00 34.94 3.82
78 79 3.475494 ACTGGGTCCACGCACACA 61.475 61.111 0.00 0.00 34.94 3.72
79 80 2.972505 CTGGGTCCACGCACACAC 60.973 66.667 0.00 0.00 34.94 3.82
80 81 4.901123 TGGGTCCACGCACACACG 62.901 66.667 0.00 0.00 39.50 4.49
107 108 3.052082 GTGCTCCACACGCATGCT 61.052 61.111 17.13 0.00 40.07 3.79
108 109 2.743538 TGCTCCACACGCATGCTC 60.744 61.111 17.13 0.00 31.40 4.26
109 110 2.743538 GCTCCACACGCATGCTCA 60.744 61.111 17.13 0.00 0.00 4.26
110 111 2.327343 GCTCCACACGCATGCTCAA 61.327 57.895 17.13 0.00 0.00 3.02
111 112 1.855213 GCTCCACACGCATGCTCAAA 61.855 55.000 17.13 0.00 0.00 2.69
112 113 0.110056 CTCCACACGCATGCTCAAAC 60.110 55.000 17.13 0.00 0.00 2.93
113 114 1.440850 CCACACGCATGCTCAAACG 60.441 57.895 17.13 0.80 0.00 3.60
114 115 2.076628 CACACGCATGCTCAAACGC 61.077 57.895 17.13 0.00 0.00 4.84
115 116 2.251963 CACGCATGCTCAAACGCA 59.748 55.556 17.13 0.00 45.10 5.24
116 117 1.370293 CACGCATGCTCAAACGCAA 60.370 52.632 17.13 0.00 44.06 4.85
117 118 1.370414 ACGCATGCTCAAACGCAAC 60.370 52.632 17.13 0.00 44.06 4.17
118 119 2.082366 CGCATGCTCAAACGCAACC 61.082 57.895 17.13 0.00 44.06 3.77
119 120 1.734117 GCATGCTCAAACGCAACCC 60.734 57.895 11.37 0.00 44.06 4.11
120 121 1.080569 CATGCTCAAACGCAACCCC 60.081 57.895 0.00 0.00 44.06 4.95
121 122 1.530419 ATGCTCAAACGCAACCCCA 60.530 52.632 0.00 0.00 44.06 4.96
122 123 1.805428 ATGCTCAAACGCAACCCCAC 61.805 55.000 0.00 0.00 44.06 4.61
123 124 3.039134 CTCAAACGCAACCCCACC 58.961 61.111 0.00 0.00 0.00 4.61
124 125 1.826054 CTCAAACGCAACCCCACCA 60.826 57.895 0.00 0.00 0.00 4.17
125 126 2.070654 CTCAAACGCAACCCCACCAC 62.071 60.000 0.00 0.00 0.00 4.16
126 127 3.213402 AAACGCAACCCCACCACG 61.213 61.111 0.00 0.00 0.00 4.94
165 166 4.953868 CACCCAACGCGTCCGACA 62.954 66.667 14.44 0.00 38.29 4.35
166 167 4.955774 ACCCAACGCGTCCGACAC 62.956 66.667 14.44 0.00 38.29 3.67
167 168 4.953868 CCCAACGCGTCCGACACA 62.954 66.667 14.44 0.00 38.29 3.72
168 169 2.962786 CCAACGCGTCCGACACAA 60.963 61.111 14.44 0.00 38.29 3.33
169 170 2.244382 CAACGCGTCCGACACAAC 59.756 61.111 14.44 0.00 38.29 3.32
170 171 2.963320 AACGCGTCCGACACAACC 60.963 61.111 14.44 0.00 38.29 3.77
171 172 3.719883 AACGCGTCCGACACAACCA 62.720 57.895 14.44 0.00 38.29 3.67
172 173 3.403057 CGCGTCCGACACAACCAG 61.403 66.667 0.00 0.00 36.29 4.00
173 174 3.712881 GCGTCCGACACAACCAGC 61.713 66.667 0.00 0.00 0.00 4.85
174 175 3.403057 CGTCCGACACAACCAGCG 61.403 66.667 0.00 0.00 0.00 5.18
175 176 3.712881 GTCCGACACAACCAGCGC 61.713 66.667 0.00 0.00 0.00 5.92
176 177 4.228567 TCCGACACAACCAGCGCA 62.229 61.111 11.47 0.00 0.00 6.09
177 178 4.012895 CCGACACAACCAGCGCAC 62.013 66.667 11.47 0.00 0.00 5.34
178 179 4.354212 CGACACAACCAGCGCACG 62.354 66.667 11.47 0.00 0.00 5.34
179 180 4.666532 GACACAACCAGCGCACGC 62.667 66.667 11.47 6.99 42.33 5.34
196 197 4.054825 CCCACATGTGCGCCCAAC 62.055 66.667 20.81 0.00 0.00 3.77
215 216 4.891727 CGTCCTGCCGCGGCTTAT 62.892 66.667 45.79 0.00 42.51 1.73
216 217 2.513897 GTCCTGCCGCGGCTTATT 60.514 61.111 45.79 0.00 42.51 1.40
217 218 2.513666 TCCTGCCGCGGCTTATTG 60.514 61.111 45.79 29.29 42.51 1.90
218 219 3.585990 CCTGCCGCGGCTTATTGG 61.586 66.667 45.79 33.05 42.51 3.16
231 232 3.774066 GCTTATTGGCCAACATCTTCAC 58.226 45.455 23.27 1.22 0.00 3.18
232 233 3.193267 GCTTATTGGCCAACATCTTCACA 59.807 43.478 23.27 0.00 0.00 3.58
233 234 4.321899 GCTTATTGGCCAACATCTTCACAA 60.322 41.667 23.27 0.00 0.00 3.33
234 235 3.947910 ATTGGCCAACATCTTCACAAG 57.052 42.857 23.27 0.00 0.00 3.16
235 236 2.363306 TGGCCAACATCTTCACAAGT 57.637 45.000 0.61 0.00 0.00 3.16
236 237 2.665165 TGGCCAACATCTTCACAAGTT 58.335 42.857 0.61 0.00 0.00 2.66
237 238 3.030291 TGGCCAACATCTTCACAAGTTT 58.970 40.909 0.61 0.00 0.00 2.66
238 239 4.211125 TGGCCAACATCTTCACAAGTTTA 58.789 39.130 0.61 0.00 0.00 2.01
239 240 4.037446 TGGCCAACATCTTCACAAGTTTAC 59.963 41.667 0.61 0.00 0.00 2.01
240 241 4.037446 GGCCAACATCTTCACAAGTTTACA 59.963 41.667 0.00 0.00 0.00 2.41
241 242 4.976116 GCCAACATCTTCACAAGTTTACAC 59.024 41.667 0.00 0.00 0.00 2.90
242 243 5.204833 CCAACATCTTCACAAGTTTACACG 58.795 41.667 0.00 0.00 0.00 4.49
243 244 5.007234 CCAACATCTTCACAAGTTTACACGA 59.993 40.000 0.00 0.00 0.00 4.35
244 245 5.652744 ACATCTTCACAAGTTTACACGAC 57.347 39.130 0.00 0.00 0.00 4.34
245 246 5.357257 ACATCTTCACAAGTTTACACGACT 58.643 37.500 0.00 0.00 0.00 4.18
246 247 5.815740 ACATCTTCACAAGTTTACACGACTT 59.184 36.000 0.00 0.00 37.82 3.01
263 264 6.980051 ACGACTTGTGAGTACTTTTTCTTT 57.020 33.333 0.00 0.00 35.88 2.52
264 265 6.772078 ACGACTTGTGAGTACTTTTTCTTTG 58.228 36.000 0.00 0.00 35.88 2.77
265 266 6.183360 ACGACTTGTGAGTACTTTTTCTTTGG 60.183 38.462 0.00 0.00 35.88 3.28
266 267 6.183360 CGACTTGTGAGTACTTTTTCTTTGGT 60.183 38.462 0.00 0.00 35.88 3.67
267 268 7.462571 ACTTGTGAGTACTTTTTCTTTGGTT 57.537 32.000 0.00 0.00 33.32 3.67
268 269 8.570068 ACTTGTGAGTACTTTTTCTTTGGTTA 57.430 30.769 0.00 0.00 33.32 2.85
269 270 8.456471 ACTTGTGAGTACTTTTTCTTTGGTTAC 58.544 33.333 0.00 0.00 33.32 2.50
270 271 7.324354 TGTGAGTACTTTTTCTTTGGTTACC 57.676 36.000 0.00 0.00 0.00 2.85
271 272 6.037391 TGTGAGTACTTTTTCTTTGGTTACCG 59.963 38.462 0.00 0.00 0.00 4.02
272 273 5.007921 TGAGTACTTTTTCTTTGGTTACCGC 59.992 40.000 0.00 0.00 0.00 5.68
273 274 4.883006 AGTACTTTTTCTTTGGTTACCGCA 59.117 37.500 0.00 0.00 0.00 5.69
274 275 4.301637 ACTTTTTCTTTGGTTACCGCAG 57.698 40.909 0.00 0.00 0.00 5.18
275 276 3.949113 ACTTTTTCTTTGGTTACCGCAGA 59.051 39.130 0.00 0.00 0.00 4.26
276 277 4.583073 ACTTTTTCTTTGGTTACCGCAGAT 59.417 37.500 3.56 0.00 0.00 2.90
277 278 5.068591 ACTTTTTCTTTGGTTACCGCAGATT 59.931 36.000 3.56 0.00 0.00 2.40
278 279 4.759516 TTTCTTTGGTTACCGCAGATTC 57.240 40.909 3.56 0.00 0.00 2.52
279 280 3.410631 TCTTTGGTTACCGCAGATTCA 57.589 42.857 0.00 0.00 0.00 2.57
280 281 3.950397 TCTTTGGTTACCGCAGATTCAT 58.050 40.909 0.00 0.00 0.00 2.57
281 282 4.331968 TCTTTGGTTACCGCAGATTCATT 58.668 39.130 0.00 0.00 0.00 2.57
282 283 4.764823 TCTTTGGTTACCGCAGATTCATTT 59.235 37.500 0.00 0.00 0.00 2.32
283 284 5.941058 TCTTTGGTTACCGCAGATTCATTTA 59.059 36.000 0.00 0.00 0.00 1.40
284 285 6.601613 TCTTTGGTTACCGCAGATTCATTTAT 59.398 34.615 0.00 0.00 0.00 1.40
285 286 6.371809 TTGGTTACCGCAGATTCATTTATC 57.628 37.500 0.00 0.00 0.00 1.75
286 287 5.432645 TGGTTACCGCAGATTCATTTATCA 58.567 37.500 0.00 0.00 0.00 2.15
287 288 5.883115 TGGTTACCGCAGATTCATTTATCAA 59.117 36.000 0.00 0.00 0.00 2.57
288 289 6.183360 TGGTTACCGCAGATTCATTTATCAAC 60.183 38.462 0.00 0.00 0.00 3.18
289 290 6.183360 GGTTACCGCAGATTCATTTATCAACA 60.183 38.462 0.00 0.00 0.00 3.33
290 291 5.235305 ACCGCAGATTCATTTATCAACAC 57.765 39.130 0.00 0.00 0.00 3.32
291 292 4.201812 ACCGCAGATTCATTTATCAACACG 60.202 41.667 0.00 0.00 0.00 4.49
292 293 4.033932 CCGCAGATTCATTTATCAACACGA 59.966 41.667 0.00 0.00 0.00 4.35
293 294 5.277490 CCGCAGATTCATTTATCAACACGAT 60.277 40.000 0.00 0.00 38.21 3.73
294 295 5.618395 CGCAGATTCATTTATCAACACGATG 59.382 40.000 0.00 0.00 35.39 3.84
295 296 5.911280 GCAGATTCATTTATCAACACGATGG 59.089 40.000 0.00 0.00 35.39 3.51
296 297 6.432936 CAGATTCATTTATCAACACGATGGG 58.567 40.000 0.00 0.00 35.39 4.00
297 298 6.260714 CAGATTCATTTATCAACACGATGGGA 59.739 38.462 0.00 0.00 35.39 4.37
298 299 7.000472 AGATTCATTTATCAACACGATGGGAT 59.000 34.615 0.00 0.00 35.39 3.85
299 300 6.618287 TTCATTTATCAACACGATGGGATC 57.382 37.500 0.00 0.00 35.39 3.36
300 301 5.063204 TCATTTATCAACACGATGGGATCC 58.937 41.667 1.92 1.92 35.39 3.36
301 302 4.495690 TTTATCAACACGATGGGATCCA 57.504 40.909 15.23 0.00 38.19 3.41
302 303 2.627515 ATCAACACGATGGGATCCAG 57.372 50.000 15.23 4.15 36.75 3.86
303 304 0.541392 TCAACACGATGGGATCCAGG 59.459 55.000 15.23 1.43 36.75 4.45
304 305 0.253044 CAACACGATGGGATCCAGGT 59.747 55.000 15.23 2.11 36.75 4.00
305 306 0.253044 AACACGATGGGATCCAGGTG 59.747 55.000 15.23 16.44 43.18 4.00
306 307 0.617535 ACACGATGGGATCCAGGTGA 60.618 55.000 22.57 1.06 41.41 4.02
307 308 0.541392 CACGATGGGATCCAGGTGAA 59.459 55.000 15.23 0.00 41.41 3.18
308 309 1.141657 CACGATGGGATCCAGGTGAAT 59.858 52.381 15.23 0.00 41.41 2.57
309 310 2.368548 CACGATGGGATCCAGGTGAATA 59.631 50.000 15.23 0.00 41.41 1.75
310 311 3.045634 ACGATGGGATCCAGGTGAATAA 58.954 45.455 15.23 0.00 36.75 1.40
311 312 3.071602 ACGATGGGATCCAGGTGAATAAG 59.928 47.826 15.23 0.00 36.75 1.73
312 313 3.324846 CGATGGGATCCAGGTGAATAAGA 59.675 47.826 15.23 0.00 36.75 2.10
313 314 4.019860 CGATGGGATCCAGGTGAATAAGAT 60.020 45.833 15.23 0.00 36.75 2.40
314 315 5.513788 CGATGGGATCCAGGTGAATAAGATT 60.514 44.000 15.23 0.00 36.75 2.40
315 316 5.052693 TGGGATCCAGGTGAATAAGATTG 57.947 43.478 15.23 0.00 0.00 2.67
316 317 4.478317 TGGGATCCAGGTGAATAAGATTGT 59.522 41.667 15.23 0.00 0.00 2.71
317 318 4.823989 GGGATCCAGGTGAATAAGATTGTG 59.176 45.833 15.23 0.00 0.00 3.33
318 319 5.397899 GGGATCCAGGTGAATAAGATTGTGA 60.398 44.000 15.23 0.00 0.00 3.58
319 320 5.762218 GGATCCAGGTGAATAAGATTGTGAG 59.238 44.000 6.95 0.00 0.00 3.51
320 321 6.408548 GGATCCAGGTGAATAAGATTGTGAGA 60.409 42.308 6.95 0.00 0.00 3.27
321 322 5.734720 TCCAGGTGAATAAGATTGTGAGAC 58.265 41.667 0.00 0.00 0.00 3.36
322 323 5.485353 TCCAGGTGAATAAGATTGTGAGACT 59.515 40.000 0.00 0.00 0.00 3.24
323 324 6.667848 TCCAGGTGAATAAGATTGTGAGACTA 59.332 38.462 0.00 0.00 0.00 2.59
324 325 6.758886 CCAGGTGAATAAGATTGTGAGACTAC 59.241 42.308 0.00 0.00 0.00 2.73
325 326 6.758886 CAGGTGAATAAGATTGTGAGACTACC 59.241 42.308 0.00 0.00 0.00 3.18
326 327 6.049790 GGTGAATAAGATTGTGAGACTACCC 58.950 44.000 0.00 0.00 0.00 3.69
327 328 6.351881 GGTGAATAAGATTGTGAGACTACCCA 60.352 42.308 0.00 0.00 0.00 4.51
328 329 7.275920 GTGAATAAGATTGTGAGACTACCCAT 58.724 38.462 0.00 0.00 0.00 4.00
329 330 8.421784 GTGAATAAGATTGTGAGACTACCCATA 58.578 37.037 0.00 0.00 0.00 2.74
330 331 8.642432 TGAATAAGATTGTGAGACTACCCATAG 58.358 37.037 0.00 0.00 34.25 2.23
331 332 8.554490 AATAAGATTGTGAGACTACCCATAGT 57.446 34.615 0.00 0.00 44.74 2.12
332 333 5.860941 AGATTGTGAGACTACCCATAGTG 57.139 43.478 0.00 0.00 41.98 2.74
333 334 4.651503 AGATTGTGAGACTACCCATAGTGG 59.348 45.833 0.00 0.00 41.98 4.00
351 352 9.986157 CCATAGTGGGAGTAATATAGGTAGTAA 57.014 37.037 0.00 0.00 32.67 2.24
355 356 9.531158 AGTGGGAGTAATATAGGTAGTAACATC 57.469 37.037 0.00 0.00 0.00 3.06
356 357 9.305555 GTGGGAGTAATATAGGTAGTAACATCA 57.694 37.037 0.00 0.00 0.00 3.07
357 358 9.305555 TGGGAGTAATATAGGTAGTAACATCAC 57.694 37.037 0.00 0.00 0.00 3.06
358 359 9.305555 GGGAGTAATATAGGTAGTAACATCACA 57.694 37.037 0.00 0.00 0.00 3.58
368 369 8.410673 AGGTAGTAACATCACACATATCTAGG 57.589 38.462 0.00 0.00 0.00 3.02
369 370 8.005388 AGGTAGTAACATCACACATATCTAGGT 58.995 37.037 0.00 0.00 0.00 3.08
370 371 8.639761 GGTAGTAACATCACACATATCTAGGTT 58.360 37.037 0.00 0.00 0.00 3.50
390 391 9.640963 CTAGGTTAAATAGATGGTGTAGTATGC 57.359 37.037 0.00 0.00 0.00 3.14
391 392 8.029782 AGGTTAAATAGATGGTGTAGTATGCA 57.970 34.615 0.00 0.00 0.00 3.96
392 393 8.491134 AGGTTAAATAGATGGTGTAGTATGCAA 58.509 33.333 0.00 0.00 27.52 4.08
393 394 9.284968 GGTTAAATAGATGGTGTAGTATGCAAT 57.715 33.333 0.00 0.00 27.52 3.56
400 401 8.978874 AGATGGTGTAGTATGCAATAAATGAA 57.021 30.769 0.00 0.00 27.52 2.57
401 402 9.060347 AGATGGTGTAGTATGCAATAAATGAAG 57.940 33.333 0.00 0.00 27.52 3.02
402 403 8.978874 ATGGTGTAGTATGCAATAAATGAAGA 57.021 30.769 0.00 0.00 27.52 2.87
403 404 8.800370 TGGTGTAGTATGCAATAAATGAAGAA 57.200 30.769 0.00 0.00 27.52 2.52
404 405 9.237187 TGGTGTAGTATGCAATAAATGAAGAAA 57.763 29.630 0.00 0.00 27.52 2.52
405 406 9.722056 GGTGTAGTATGCAATAAATGAAGAAAG 57.278 33.333 0.00 0.00 27.52 2.62
421 422 9.750125 AATGAAGAAAGAAATCAAAGTGGTAAC 57.250 29.630 0.00 0.00 0.00 2.50
435 436 3.443145 TGGTAACATAGGGGGTGTTTG 57.557 47.619 0.00 0.00 46.17 2.93
436 437 2.041891 TGGTAACATAGGGGGTGTTTGG 59.958 50.000 0.00 0.00 46.17 3.28
437 438 2.042026 GGTAACATAGGGGGTGTTTGGT 59.958 50.000 0.00 0.00 40.13 3.67
438 439 3.500836 GGTAACATAGGGGGTGTTTGGTT 60.501 47.826 0.00 0.00 40.13 3.67
439 440 2.597578 ACATAGGGGGTGTTTGGTTC 57.402 50.000 0.00 0.00 0.00 3.62
440 441 1.783979 ACATAGGGGGTGTTTGGTTCA 59.216 47.619 0.00 0.00 0.00 3.18
441 442 2.225017 ACATAGGGGGTGTTTGGTTCAG 60.225 50.000 0.00 0.00 0.00 3.02
442 443 0.774908 TAGGGGGTGTTTGGTTCAGG 59.225 55.000 0.00 0.00 0.00 3.86
443 444 1.533033 GGGGGTGTTTGGTTCAGGG 60.533 63.158 0.00 0.00 0.00 4.45
444 445 1.539665 GGGGTGTTTGGTTCAGGGA 59.460 57.895 0.00 0.00 0.00 4.20
445 446 0.114364 GGGGTGTTTGGTTCAGGGAT 59.886 55.000 0.00 0.00 0.00 3.85
446 447 1.482365 GGGGTGTTTGGTTCAGGGATT 60.482 52.381 0.00 0.00 0.00 3.01
447 448 2.325484 GGGTGTTTGGTTCAGGGATTT 58.675 47.619 0.00 0.00 0.00 2.17
448 449 2.703536 GGGTGTTTGGTTCAGGGATTTT 59.296 45.455 0.00 0.00 0.00 1.82
449 450 3.135712 GGGTGTTTGGTTCAGGGATTTTT 59.864 43.478 0.00 0.00 0.00 1.94
475 476 5.239351 GTCCAAGAGACTAGAAAAAGTCCC 58.761 45.833 0.00 0.00 45.86 4.46
476 477 5.012251 GTCCAAGAGACTAGAAAAAGTCCCT 59.988 44.000 0.00 0.00 45.86 4.20
477 478 6.210984 GTCCAAGAGACTAGAAAAAGTCCCTA 59.789 42.308 0.00 0.00 45.86 3.53
478 479 6.785963 TCCAAGAGACTAGAAAAAGTCCCTAA 59.214 38.462 0.00 0.00 45.86 2.69
479 480 7.291651 TCCAAGAGACTAGAAAAAGTCCCTAAA 59.708 37.037 0.00 0.00 45.86 1.85
480 481 7.937394 CCAAGAGACTAGAAAAAGTCCCTAAAA 59.063 37.037 0.00 0.00 45.86 1.52
481 482 9.338622 CAAGAGACTAGAAAAAGTCCCTAAAAA 57.661 33.333 0.00 0.00 45.86 1.94
482 483 9.562408 AAGAGACTAGAAAAAGTCCCTAAAAAG 57.438 33.333 0.00 0.00 45.86 2.27
483 484 8.715842 AGAGACTAGAAAAAGTCCCTAAAAAGT 58.284 33.333 0.00 0.00 45.86 2.66
484 485 8.905660 AGACTAGAAAAAGTCCCTAAAAAGTC 57.094 34.615 0.00 0.00 45.86 3.01
485 486 7.937942 AGACTAGAAAAAGTCCCTAAAAAGTCC 59.062 37.037 0.00 0.00 45.86 3.85
486 487 7.002879 ACTAGAAAAAGTCCCTAAAAAGTCCC 58.997 38.462 0.00 0.00 0.00 4.46
487 488 6.027025 AGAAAAAGTCCCTAAAAAGTCCCT 57.973 37.500 0.00 0.00 0.00 4.20
488 489 7.157947 AGAAAAAGTCCCTAAAAAGTCCCTA 57.842 36.000 0.00 0.00 0.00 3.53
489 490 7.232188 AGAAAAAGTCCCTAAAAAGTCCCTAG 58.768 38.462 0.00 0.00 0.00 3.02
490 491 5.516059 AAAGTCCCTAAAAAGTCCCTAGG 57.484 43.478 0.06 0.06 33.30 3.02
491 492 4.431158 AGTCCCTAAAAAGTCCCTAGGA 57.569 45.455 11.48 0.00 35.17 2.94
492 493 4.771338 AGTCCCTAAAAAGTCCCTAGGAA 58.229 43.478 11.48 0.00 35.17 3.36
493 494 5.360041 AGTCCCTAAAAAGTCCCTAGGAAT 58.640 41.667 11.48 0.00 35.17 3.01
494 495 5.429109 AGTCCCTAAAAAGTCCCTAGGAATC 59.571 44.000 11.48 0.00 35.17 2.52
495 496 5.191124 GTCCCTAAAAAGTCCCTAGGAATCA 59.809 44.000 11.48 0.00 35.17 2.57
496 497 5.793763 TCCCTAAAAAGTCCCTAGGAATCAA 59.206 40.000 11.48 0.00 35.17 2.57
497 498 6.276092 TCCCTAAAAAGTCCCTAGGAATCAAA 59.724 38.462 11.48 0.00 35.17 2.69
498 499 6.377429 CCCTAAAAAGTCCCTAGGAATCAAAC 59.623 42.308 11.48 0.00 35.17 2.93
499 500 5.959618 AAAAAGTCCCTAGGAATCAAACG 57.040 39.130 11.48 0.00 31.38 3.60
500 501 3.629142 AAGTCCCTAGGAATCAAACGG 57.371 47.619 11.48 0.00 31.38 4.44
501 502 1.838077 AGTCCCTAGGAATCAAACGGG 59.162 52.381 11.48 0.00 31.38 5.28
502 503 1.835531 GTCCCTAGGAATCAAACGGGA 59.164 52.381 11.48 0.00 38.33 5.14
503 504 2.116238 TCCCTAGGAATCAAACGGGAG 58.884 52.381 11.48 0.00 35.86 4.30
504 505 1.141053 CCCTAGGAATCAAACGGGAGG 59.859 57.143 11.48 0.00 33.46 4.30
505 506 1.141053 CCTAGGAATCAAACGGGAGGG 59.859 57.143 1.05 0.00 0.00 4.30
506 507 2.116238 CTAGGAATCAAACGGGAGGGA 58.884 52.381 0.00 0.00 0.00 4.20
507 508 0.618981 AGGAATCAAACGGGAGGGAC 59.381 55.000 0.00 0.00 0.00 4.46
509 510 1.004394 GGAATCAAACGGGAGGGACTT 59.996 52.381 0.00 0.00 41.55 3.01
510 511 2.554564 GGAATCAAACGGGAGGGACTTT 60.555 50.000 0.00 0.00 41.55 2.66
511 512 2.971901 ATCAAACGGGAGGGACTTTT 57.028 45.000 0.00 0.00 41.55 2.27
512 513 2.740506 TCAAACGGGAGGGACTTTTT 57.259 45.000 0.00 0.00 41.55 1.94
513 514 2.578786 TCAAACGGGAGGGACTTTTTC 58.421 47.619 0.00 0.00 41.55 2.29
514 515 2.173996 TCAAACGGGAGGGACTTTTTCT 59.826 45.455 0.00 0.00 41.55 2.52
515 516 3.391955 TCAAACGGGAGGGACTTTTTCTA 59.608 43.478 0.00 0.00 41.55 2.10
516 517 4.042435 TCAAACGGGAGGGACTTTTTCTAT 59.958 41.667 0.00 0.00 41.55 1.98
517 518 5.248934 TCAAACGGGAGGGACTTTTTCTATA 59.751 40.000 0.00 0.00 41.55 1.31
518 519 5.354842 AACGGGAGGGACTTTTTCTATAG 57.645 43.478 0.00 0.00 41.55 1.31
519 520 3.710165 ACGGGAGGGACTTTTTCTATAGG 59.290 47.826 0.00 0.00 41.55 2.57
520 521 3.071167 CGGGAGGGACTTTTTCTATAGGG 59.929 52.174 0.00 0.00 41.55 3.53
521 522 4.304659 GGGAGGGACTTTTTCTATAGGGA 58.695 47.826 0.00 0.00 41.55 4.20
522 523 4.102838 GGGAGGGACTTTTTCTATAGGGAC 59.897 50.000 0.00 0.00 41.55 4.46
523 524 4.969999 GGAGGGACTTTTTCTATAGGGACT 59.030 45.833 0.00 0.00 41.55 3.85
524 525 6.141790 GGAGGGACTTTTTCTATAGGGACTA 58.858 44.000 0.00 0.00 43.94 2.59
525 526 6.268158 GGAGGGACTTTTTCTATAGGGACTAG 59.732 46.154 0.00 0.00 43.06 2.57
526 527 6.994582 AGGGACTTTTTCTATAGGGACTAGA 58.005 40.000 0.00 0.00 40.14 2.43
527 528 7.428335 AGGGACTTTTTCTATAGGGACTAGAA 58.572 38.462 0.00 0.00 40.14 2.10
528 529 7.905106 AGGGACTTTTTCTATAGGGACTAGAAA 59.095 37.037 0.00 2.28 40.14 2.52
542 543 7.931046 AGGGACTAGAAAAAGACTCTACTAGA 58.069 38.462 0.00 0.00 36.02 2.43
543 544 8.050930 AGGGACTAGAAAAAGACTCTACTAGAG 58.949 40.741 11.06 11.06 42.94 2.43
544 545 8.048514 GGGACTAGAAAAAGACTCTACTAGAGA 58.951 40.741 18.41 0.00 45.07 3.10
599 600 4.618920 GTCCTAGGACTTCTGAACCAAA 57.381 45.455 31.12 0.00 41.57 3.28
600 601 4.316645 GTCCTAGGACTTCTGAACCAAAC 58.683 47.826 31.12 3.26 41.57 2.93
601 602 3.971305 TCCTAGGACTTCTGAACCAAACA 59.029 43.478 7.62 0.00 0.00 2.83
602 603 4.065789 CCTAGGACTTCTGAACCAAACAC 58.934 47.826 1.05 0.00 0.00 3.32
603 604 2.932261 AGGACTTCTGAACCAAACACC 58.068 47.619 0.58 0.00 0.00 4.16
604 605 1.954382 GGACTTCTGAACCAAACACCC 59.046 52.381 0.00 0.00 0.00 4.61
605 606 1.954382 GACTTCTGAACCAAACACCCC 59.046 52.381 0.00 0.00 0.00 4.95
606 607 1.328279 CTTCTGAACCAAACACCCCC 58.672 55.000 0.00 0.00 0.00 5.40
607 608 0.631753 TTCTGAACCAAACACCCCCA 59.368 50.000 0.00 0.00 0.00 4.96
608 609 0.856982 TCTGAACCAAACACCCCCAT 59.143 50.000 0.00 0.00 0.00 4.00
609 610 2.066592 TCTGAACCAAACACCCCCATA 58.933 47.619 0.00 0.00 0.00 2.74
610 611 2.041081 TCTGAACCAAACACCCCCATAG 59.959 50.000 0.00 0.00 0.00 2.23
611 612 1.182667 GAACCAAACACCCCCATAGC 58.817 55.000 0.00 0.00 0.00 2.97
612 613 0.783850 AACCAAACACCCCCATAGCT 59.216 50.000 0.00 0.00 0.00 3.32
613 614 1.676248 ACCAAACACCCCCATAGCTA 58.324 50.000 0.00 0.00 0.00 3.32
614 615 1.564348 ACCAAACACCCCCATAGCTAG 59.436 52.381 0.00 0.00 0.00 3.42
615 616 1.564348 CCAAACACCCCCATAGCTAGT 59.436 52.381 0.00 0.00 0.00 2.57
616 617 2.025321 CCAAACACCCCCATAGCTAGTT 60.025 50.000 0.00 0.00 0.00 2.24
617 618 3.201266 CCAAACACCCCCATAGCTAGTTA 59.799 47.826 0.00 0.00 0.00 2.24
618 619 4.196971 CAAACACCCCCATAGCTAGTTAC 58.803 47.826 0.00 0.00 0.00 2.50
619 620 2.405559 ACACCCCCATAGCTAGTTACC 58.594 52.381 0.00 0.00 0.00 2.85
620 621 2.293318 ACACCCCCATAGCTAGTTACCA 60.293 50.000 0.00 0.00 0.00 3.25
621 622 2.104281 CACCCCCATAGCTAGTTACCAC 59.896 54.545 0.00 0.00 0.00 4.16
622 623 2.022330 ACCCCCATAGCTAGTTACCACT 60.022 50.000 0.00 0.00 36.99 4.00
623 624 3.208234 ACCCCCATAGCTAGTTACCACTA 59.792 47.826 0.00 0.00 34.06 2.74
638 639 8.818622 AGTTACCACTAGTATGAGTAACATCA 57.181 34.615 24.42 0.00 43.23 3.07
639 640 8.684520 AGTTACCACTAGTATGAGTAACATCAC 58.315 37.037 24.42 10.18 43.23 3.06
640 641 8.464404 GTTACCACTAGTATGAGTAACATCACA 58.536 37.037 21.02 0.00 41.41 3.58
641 642 6.864342 ACCACTAGTATGAGTAACATCACAC 58.136 40.000 0.00 0.00 40.07 3.82
642 643 6.436218 ACCACTAGTATGAGTAACATCACACA 59.564 38.462 0.00 0.00 40.07 3.72
643 644 7.124298 ACCACTAGTATGAGTAACATCACACAT 59.876 37.037 0.00 0.00 40.07 3.21
644 645 8.630037 CCACTAGTATGAGTAACATCACACATA 58.370 37.037 0.00 0.00 40.07 2.29
649 650 9.755804 AGTATGAGTAACATCACACATATCAAG 57.244 33.333 0.00 0.00 40.07 3.02
650 651 8.982685 GTATGAGTAACATCACACATATCAAGG 58.017 37.037 0.00 0.00 40.07 3.61
651 652 5.817296 TGAGTAACATCACACATATCAAGGC 59.183 40.000 0.00 0.00 0.00 4.35
652 653 5.744171 AGTAACATCACACATATCAAGGCA 58.256 37.500 0.00 0.00 0.00 4.75
653 654 6.179756 AGTAACATCACACATATCAAGGCAA 58.820 36.000 0.00 0.00 0.00 4.52
654 655 5.571784 AACATCACACATATCAAGGCAAG 57.428 39.130 0.00 0.00 0.00 4.01
655 656 4.847198 ACATCACACATATCAAGGCAAGA 58.153 39.130 0.00 0.00 0.00 3.02
656 657 5.443283 ACATCACACATATCAAGGCAAGAT 58.557 37.500 0.00 0.00 0.00 2.40
657 658 5.298527 ACATCACACATATCAAGGCAAGATG 59.701 40.000 0.00 0.00 36.24 2.90
658 659 4.847198 TCACACATATCAAGGCAAGATGT 58.153 39.130 2.43 0.00 0.00 3.06
661 662 5.165911 CACATATCAAGGCAAGATGTGTC 57.834 43.478 15.13 0.00 43.18 3.67
663 664 6.051074 CACATATCAAGGCAAGATGTGTCTA 58.949 40.000 15.13 0.00 43.11 2.59
664 665 6.709397 CACATATCAAGGCAAGATGTGTCTAT 59.291 38.462 15.13 0.00 43.11 1.98
665 666 7.874528 CACATATCAAGGCAAGATGTGTCTATA 59.125 37.037 15.13 0.00 43.11 1.31
666 667 8.093307 ACATATCAAGGCAAGATGTGTCTATAG 58.907 37.037 13.16 0.00 43.11 1.31
667 668 4.697514 TCAAGGCAAGATGTGTCTATAGC 58.302 43.478 0.00 0.00 43.11 2.97
668 669 3.760580 AGGCAAGATGTGTCTATAGCC 57.239 47.619 0.00 0.00 41.69 3.93
669 670 3.312890 AGGCAAGATGTGTCTATAGCCT 58.687 45.455 11.05 11.05 41.69 4.58
670 671 4.483950 AGGCAAGATGTGTCTATAGCCTA 58.516 43.478 13.74 0.00 46.63 3.93
671 672 4.901849 AGGCAAGATGTGTCTATAGCCTAA 59.098 41.667 13.74 0.00 46.63 2.69
672 673 5.545723 AGGCAAGATGTGTCTATAGCCTAAT 59.454 40.000 13.74 0.00 46.63 1.73
673 674 6.726299 AGGCAAGATGTGTCTATAGCCTAATA 59.274 38.462 13.74 0.00 46.63 0.98
674 675 7.235606 AGGCAAGATGTGTCTATAGCCTAATAA 59.764 37.037 13.74 0.00 46.63 1.40
675 676 7.878127 GGCAAGATGTGTCTATAGCCTAATAAA 59.122 37.037 0.00 0.00 40.78 1.40
676 677 9.442047 GCAAGATGTGTCTATAGCCTAATAAAT 57.558 33.333 0.00 0.00 33.30 1.40
682 683 9.764363 TGTGTCTATAGCCTAATAAATGAAGTG 57.236 33.333 0.00 0.00 0.00 3.16
683 684 8.713271 GTGTCTATAGCCTAATAAATGAAGTGC 58.287 37.037 0.00 0.00 0.00 4.40
684 685 8.651389 TGTCTATAGCCTAATAAATGAAGTGCT 58.349 33.333 0.00 0.00 0.00 4.40
685 686 8.930760 GTCTATAGCCTAATAAATGAAGTGCTG 58.069 37.037 0.00 0.00 0.00 4.41
686 687 4.907879 AGCCTAATAAATGAAGTGCTGC 57.092 40.909 0.00 0.00 0.00 5.25
687 688 4.272489 AGCCTAATAAATGAAGTGCTGCA 58.728 39.130 0.00 0.00 0.00 4.41
688 689 4.891756 AGCCTAATAAATGAAGTGCTGCAT 59.108 37.500 5.27 0.00 0.00 3.96
689 690 5.361857 AGCCTAATAAATGAAGTGCTGCATT 59.638 36.000 5.27 0.00 36.35 3.56
690 691 6.044682 GCCTAATAAATGAAGTGCTGCATTT 58.955 36.000 18.80 18.80 44.36 2.32
691 692 6.536224 GCCTAATAAATGAAGTGCTGCATTTT 59.464 34.615 19.69 6.93 40.68 1.82
692 693 7.706179 GCCTAATAAATGAAGTGCTGCATTTTA 59.294 33.333 19.69 8.27 40.68 1.52
693 694 9.023967 CCTAATAAATGAAGTGCTGCATTTTAC 57.976 33.333 19.69 1.12 40.68 2.01
694 695 7.832503 AATAAATGAAGTGCTGCATTTTACC 57.167 32.000 19.69 0.43 40.68 2.85
695 696 4.870123 AATGAAGTGCTGCATTTTACCA 57.130 36.364 11.78 6.09 31.02 3.25
696 697 3.641437 TGAAGTGCTGCATTTTACCAC 57.359 42.857 11.78 0.00 0.00 4.16
697 698 2.954989 TGAAGTGCTGCATTTTACCACA 59.045 40.909 11.78 2.35 0.00 4.17
698 699 3.243367 TGAAGTGCTGCATTTTACCACAC 60.243 43.478 11.78 0.00 0.00 3.82
699 700 2.305928 AGTGCTGCATTTTACCACACA 58.694 42.857 5.27 0.00 0.00 3.72
700 701 2.892852 AGTGCTGCATTTTACCACACAT 59.107 40.909 5.27 0.00 0.00 3.21
701 702 4.078537 AGTGCTGCATTTTACCACACATA 58.921 39.130 5.27 0.00 0.00 2.29
702 703 4.706476 AGTGCTGCATTTTACCACACATAT 59.294 37.500 5.27 0.00 0.00 1.78
703 704 4.799949 GTGCTGCATTTTACCACACATATG 59.200 41.667 5.27 0.00 0.00 1.78
704 705 4.462132 TGCTGCATTTTACCACACATATGT 59.538 37.500 1.41 1.41 40.80 2.29
705 706 5.047448 TGCTGCATTTTACCACACATATGTT 60.047 36.000 5.37 0.00 36.72 2.71
706 707 6.151817 TGCTGCATTTTACCACACATATGTTA 59.848 34.615 5.37 0.00 36.72 2.41
707 708 6.472163 GCTGCATTTTACCACACATATGTTAC 59.528 38.462 5.37 0.00 36.72 2.50
708 709 7.628366 GCTGCATTTTACCACACATATGTTACT 60.628 37.037 5.37 0.00 36.72 2.24
709 710 7.757526 TGCATTTTACCACACATATGTTACTC 58.242 34.615 5.37 0.00 36.72 2.59
710 711 7.148154 TGCATTTTACCACACATATGTTACTCC 60.148 37.037 5.37 0.00 36.72 3.85
711 712 7.681065 GCATTTTACCACACATATGTTACTCCC 60.681 40.741 5.37 0.00 36.72 4.30
712 713 3.926058 ACCACACATATGTTACTCCCC 57.074 47.619 5.37 0.00 36.72 4.81
713 714 3.186283 ACCACACATATGTTACTCCCCA 58.814 45.455 5.37 0.00 36.72 4.96
714 715 3.054655 ACCACACATATGTTACTCCCCAC 60.055 47.826 5.37 0.00 36.72 4.61
715 716 3.199946 CCACACATATGTTACTCCCCACT 59.800 47.826 5.37 0.00 36.72 4.00
716 717 4.407621 CCACACATATGTTACTCCCCACTA 59.592 45.833 5.37 0.00 36.72 2.74
717 718 5.071788 CCACACATATGTTACTCCCCACTAT 59.928 44.000 5.37 0.00 36.72 2.12
718 719 6.269077 CCACACATATGTTACTCCCCACTATA 59.731 42.308 5.37 0.00 36.72 1.31
719 720 7.202056 CCACACATATGTTACTCCCCACTATAA 60.202 40.741 5.37 0.00 36.72 0.98
720 721 8.208224 CACACATATGTTACTCCCCACTATAAA 58.792 37.037 5.37 0.00 36.72 1.40
721 722 8.429641 ACACATATGTTACTCCCCACTATAAAG 58.570 37.037 5.37 0.00 34.46 1.85
722 723 7.878127 CACATATGTTACTCCCCACTATAAAGG 59.122 40.741 5.37 0.00 0.00 3.11
723 724 7.571357 ACATATGTTACTCCCCACTATAAAGGT 59.429 37.037 1.41 0.00 0.00 3.50
724 725 9.096823 CATATGTTACTCCCCACTATAAAGGTA 57.903 37.037 0.00 0.00 0.00 3.08
725 726 7.613551 ATGTTACTCCCCACTATAAAGGTAG 57.386 40.000 0.00 0.00 0.00 3.18
726 727 6.505754 TGTTACTCCCCACTATAAAGGTAGT 58.494 40.000 0.00 0.00 35.34 2.73
727 728 7.651607 TGTTACTCCCCACTATAAAGGTAGTA 58.348 38.462 0.00 0.00 33.29 1.82
728 729 8.121833 TGTTACTCCCCACTATAAAGGTAGTAA 58.878 37.037 0.00 0.00 33.29 2.24
729 730 8.417106 GTTACTCCCCACTATAAAGGTAGTAAC 58.583 40.741 18.13 18.13 40.83 2.50
730 731 6.505754 ACTCCCCACTATAAAGGTAGTAACA 58.494 40.000 0.00 0.00 33.29 2.41
731 732 7.137567 ACTCCCCACTATAAAGGTAGTAACAT 58.862 38.462 0.00 0.00 33.29 2.71
732 733 8.291745 ACTCCCCACTATAAAGGTAGTAACATA 58.708 37.037 0.00 0.00 33.29 2.29
733 734 8.716674 TCCCCACTATAAAGGTAGTAACATAG 57.283 38.462 0.00 0.00 33.29 2.23
734 735 8.291745 TCCCCACTATAAAGGTAGTAACATAGT 58.708 37.037 0.00 0.00 33.29 2.12
735 736 9.592196 CCCCACTATAAAGGTAGTAACATAGTA 57.408 37.037 0.00 0.00 33.29 1.82
762 763 9.705103 TTACTTGTCTATACTACTACCCATTGT 57.295 33.333 0.00 0.00 0.00 2.71
763 764 8.008513 ACTTGTCTATACTACTACCCATTGTG 57.991 38.462 0.00 0.00 0.00 3.33
764 765 6.971726 TGTCTATACTACTACCCATTGTGG 57.028 41.667 0.00 0.00 37.25 4.17
765 766 5.303589 TGTCTATACTACTACCCATTGTGGC 59.696 44.000 0.00 0.00 35.79 5.01
766 767 5.539193 GTCTATACTACTACCCATTGTGGCT 59.461 44.000 0.00 0.00 35.79 4.75
767 768 6.718454 GTCTATACTACTACCCATTGTGGCTA 59.282 42.308 0.00 0.00 35.79 3.93
768 769 6.946583 TCTATACTACTACCCATTGTGGCTAG 59.053 42.308 0.00 0.00 35.79 3.42
769 770 3.721021 ACTACTACCCATTGTGGCTAGT 58.279 45.455 8.55 8.55 35.79 2.57
770 771 3.705072 ACTACTACCCATTGTGGCTAGTC 59.295 47.826 7.13 0.00 35.79 2.59
789 790 5.886960 AGTCTGAAGGAAAATTGGATTCG 57.113 39.130 0.00 0.00 0.00 3.34
843 847 2.439409 TCATTACTCGTCGAGAACCCA 58.561 47.619 28.33 6.56 33.32 4.51
912 916 1.065126 CCAAATCTCTTCGCCTCCCTT 60.065 52.381 0.00 0.00 0.00 3.95
919 923 3.385111 TCTCTTCGCCTCCCTTCTTAATC 59.615 47.826 0.00 0.00 0.00 1.75
950 959 5.350547 CCTCCTATATAAATCCCTCCACCA 58.649 45.833 0.00 0.00 0.00 4.17
952 961 7.139619 CCTCCTATATAAATCCCTCCACCATA 58.860 42.308 0.00 0.00 0.00 2.74
963 979 2.427002 CCTCCACCATACCATCCTCTCT 60.427 54.545 0.00 0.00 0.00 3.10
1010 1030 1.340405 ACCATCAGCCATGTCTTCCAC 60.340 52.381 0.00 0.00 0.00 4.02
1035 1055 0.536260 AGATCTCGCTGAAGCTGCTT 59.464 50.000 15.92 15.92 39.32 3.91
1110 1130 0.037790 ACTTCGTCTTCAGCCTGCTC 60.038 55.000 0.00 0.00 0.00 4.26
1113 1133 2.091112 CGTCTTCAGCCTGCTCACG 61.091 63.158 0.00 0.00 0.00 4.35
1116 1136 2.047844 TTCAGCCTGCTCACGCTC 60.048 61.111 0.00 0.00 36.97 5.03
1222 1242 4.537433 GCTGCTACCTGCTCCCCG 62.537 72.222 0.00 0.00 43.37 5.73
1223 1243 3.854669 CTGCTACCTGCTCCCCGG 61.855 72.222 0.00 0.00 43.37 5.73
1234 1254 3.628646 CTCCCCGGCAAGGACAAGG 62.629 68.421 0.00 0.00 45.00 3.61
1239 1259 3.056328 GGCAAGGACAAGGCCGAC 61.056 66.667 0.00 0.00 38.04 4.79
1325 1345 4.931292 TGGTAAGGGCCAGGATGA 57.069 55.556 6.18 0.00 39.69 2.92
1326 1346 2.620234 TGGTAAGGGCCAGGATGAG 58.380 57.895 6.18 0.00 39.69 2.90
1327 1347 0.988145 TGGTAAGGGCCAGGATGAGG 60.988 60.000 6.18 0.00 39.69 3.86
1328 1348 0.694444 GGTAAGGGCCAGGATGAGGA 60.694 60.000 6.18 0.00 39.69 3.71
1329 1349 0.470341 GTAAGGGCCAGGATGAGGAC 59.530 60.000 6.18 0.00 39.69 3.85
1330 1350 1.048724 TAAGGGCCAGGATGAGGACG 61.049 60.000 6.18 0.00 39.69 4.79
1333 1353 4.899239 GCCAGGATGAGGACGCCG 62.899 72.222 0.00 0.00 39.69 6.46
1362 1382 1.424493 CGCTGGCGAGGTTCAAGATC 61.424 60.000 9.51 0.00 42.83 2.75
1464 1484 2.964925 GTGACGTTCGTGCTGCCA 60.965 61.111 1.74 0.00 0.00 4.92
1545 1568 1.445582 GTACGTGAAGGGGCTCGTG 60.446 63.158 0.00 0.00 38.30 4.35
1548 1571 2.432628 GTGAAGGGGCTCGTGACG 60.433 66.667 0.00 0.00 0.00 4.35
1557 1580 1.076533 GGCTCGTGACGTACATGGTG 61.077 60.000 4.40 0.00 36.29 4.17
1762 1789 5.174395 CCAAGAAGAAGTGAAGTGATCGAT 58.826 41.667 0.00 0.00 0.00 3.59
1788 1815 1.503542 CGTACCGTACGTGCCTCTT 59.496 57.895 20.61 0.00 46.41 2.85
1857 1895 1.616865 TGGTGTCTCCAAGTTAGTCGG 59.383 52.381 0.00 0.00 44.12 4.79
1865 1903 1.067071 CCAAGTTAGTCGGTCCTGGTC 60.067 57.143 0.00 0.00 0.00 4.02
1881 1919 2.481952 CTGGTCTAAGCTTGCTTGTGTC 59.518 50.000 17.04 8.04 0.00 3.67
1887 1925 2.283145 AGCTTGCTTGTGTCTCCAAT 57.717 45.000 0.00 0.00 0.00 3.16
1893 1931 5.105997 GCTTGCTTGTGTCTCCAATCTAATT 60.106 40.000 0.00 0.00 0.00 1.40
2009 2047 2.098117 GCATCAGTGGAAAAGAATCCGG 59.902 50.000 0.00 0.00 42.76 5.14
2025 2063 2.641559 GGGACGAGTCGACGTTGT 59.358 61.111 21.50 9.96 46.52 3.32
2041 2079 2.601266 CGTTGTGACGGAAACATCAACC 60.601 50.000 0.00 0.00 45.32 3.77
2044 2082 3.283751 TGTGACGGAAACATCAACCTTT 58.716 40.909 0.00 0.00 0.00 3.11
2045 2083 3.314080 TGTGACGGAAACATCAACCTTTC 59.686 43.478 0.00 0.00 0.00 2.62
2046 2084 2.882137 TGACGGAAACATCAACCTTTCC 59.118 45.455 0.00 0.00 41.43 3.13
2047 2085 2.882137 GACGGAAACATCAACCTTTCCA 59.118 45.455 9.29 0.00 43.97 3.53
2048 2086 2.621526 ACGGAAACATCAACCTTTCCAC 59.378 45.455 9.29 0.00 43.97 4.02
2049 2087 2.621055 CGGAAACATCAACCTTTCCACA 59.379 45.455 9.29 0.00 43.97 4.17
2050 2088 3.304659 CGGAAACATCAACCTTTCCACAG 60.305 47.826 9.29 0.00 43.97 3.66
2051 2089 3.636764 GGAAACATCAACCTTTCCACAGT 59.363 43.478 4.60 0.00 43.46 3.55
2052 2090 4.261614 GGAAACATCAACCTTTCCACAGTC 60.262 45.833 4.60 0.00 43.46 3.51
2053 2091 2.863809 ACATCAACCTTTCCACAGTCC 58.136 47.619 0.00 0.00 0.00 3.85
2054 2092 2.174639 ACATCAACCTTTCCACAGTCCA 59.825 45.455 0.00 0.00 0.00 4.02
2055 2093 3.221771 CATCAACCTTTCCACAGTCCAA 58.778 45.455 0.00 0.00 0.00 3.53
2056 2094 2.650322 TCAACCTTTCCACAGTCCAAC 58.350 47.619 0.00 0.00 0.00 3.77
2057 2095 1.333619 CAACCTTTCCACAGTCCAACG 59.666 52.381 0.00 0.00 0.00 4.10
2058 2096 0.179029 ACCTTTCCACAGTCCAACGG 60.179 55.000 0.00 0.00 0.00 4.44
2059 2097 0.107831 CCTTTCCACAGTCCAACGGA 59.892 55.000 0.00 0.00 0.00 4.69
2060 2098 1.512926 CTTTCCACAGTCCAACGGAG 58.487 55.000 0.00 0.00 29.39 4.63
2061 2099 0.107831 TTTCCACAGTCCAACGGAGG 59.892 55.000 0.00 0.00 29.39 4.30
2062 2100 0.761323 TTCCACAGTCCAACGGAGGA 60.761 55.000 0.00 0.00 32.21 3.71
2063 2101 0.761323 TCCACAGTCCAACGGAGGAA 60.761 55.000 0.00 0.00 39.92 3.36
2064 2102 0.602905 CCACAGTCCAACGGAGGAAC 60.603 60.000 0.00 0.00 39.92 3.62
2065 2103 0.105964 CACAGTCCAACGGAGGAACA 59.894 55.000 0.00 0.00 39.92 3.18
2066 2104 0.106149 ACAGTCCAACGGAGGAACAC 59.894 55.000 0.00 0.00 39.92 3.32
2067 2105 0.105964 CAGTCCAACGGAGGAACACA 59.894 55.000 0.00 0.00 39.92 3.72
2068 2106 0.106149 AGTCCAACGGAGGAACACAC 59.894 55.000 0.00 0.00 39.92 3.82
2069 2107 0.106149 GTCCAACGGAGGAACACACT 59.894 55.000 0.00 0.00 39.92 3.55
2070 2108 1.342174 GTCCAACGGAGGAACACACTA 59.658 52.381 0.00 0.00 39.92 2.74
2071 2109 1.616865 TCCAACGGAGGAACACACTAG 59.383 52.381 0.00 0.00 33.93 2.57
2072 2110 1.429463 CAACGGAGGAACACACTAGC 58.571 55.000 0.00 0.00 0.00 3.42
2073 2111 1.000955 CAACGGAGGAACACACTAGCT 59.999 52.381 0.00 0.00 0.00 3.32
2074 2112 2.211250 ACGGAGGAACACACTAGCTA 57.789 50.000 0.00 0.00 0.00 3.32
2075 2113 2.522185 ACGGAGGAACACACTAGCTAA 58.478 47.619 0.00 0.00 0.00 3.09
2076 2114 3.097614 ACGGAGGAACACACTAGCTAAT 58.902 45.455 0.00 0.00 0.00 1.73
2077 2115 3.119101 ACGGAGGAACACACTAGCTAATG 60.119 47.826 0.00 0.00 0.00 1.90
2078 2116 3.198872 GGAGGAACACACTAGCTAATGC 58.801 50.000 1.25 0.00 40.05 3.56
2088 2126 8.237267 AACACACTAGCTAATGCTATTTTGTTC 58.763 33.333 1.25 0.00 44.48 3.18
2093 2131 5.610908 GCTAATGCTATTTTGTTCTTGCG 57.389 39.130 0.00 0.00 36.03 4.85
2094 2132 5.095490 GCTAATGCTATTTTGTTCTTGCGT 58.905 37.500 0.00 0.00 36.03 5.24
2095 2133 6.255215 GCTAATGCTATTTTGTTCTTGCGTA 58.745 36.000 0.00 0.00 36.03 4.42
2096 2134 6.194692 GCTAATGCTATTTTGTTCTTGCGTAC 59.805 38.462 0.00 0.00 36.03 3.67
2097 2135 5.621197 ATGCTATTTTGTTCTTGCGTACA 57.379 34.783 0.00 0.00 0.00 2.90
2098 2136 5.425577 TGCTATTTTGTTCTTGCGTACAA 57.574 34.783 0.00 0.00 32.76 2.41
2109 2147 2.748461 TGCGTACAAGAGTTTTGTGC 57.252 45.000 9.22 6.91 34.11 4.57
2110 2148 2.010497 TGCGTACAAGAGTTTTGTGCA 58.990 42.857 13.64 10.44 35.24 4.57
2111 2149 2.223157 TGCGTACAAGAGTTTTGTGCAC 60.223 45.455 10.75 10.75 35.24 4.57
2112 2150 2.223157 GCGTACAAGAGTTTTGTGCACA 60.223 45.455 17.42 17.42 35.24 4.57
2113 2151 3.548014 GCGTACAAGAGTTTTGTGCACAT 60.548 43.478 22.39 5.14 35.24 3.21
2114 2152 4.319190 GCGTACAAGAGTTTTGTGCACATA 60.319 41.667 22.39 13.86 35.24 2.29
2115 2153 5.616866 GCGTACAAGAGTTTTGTGCACATAT 60.617 40.000 22.39 6.85 35.24 1.78
2116 2154 6.401688 GCGTACAAGAGTTTTGTGCACATATA 60.402 38.462 22.39 2.25 35.24 0.86
2117 2155 7.676338 GCGTACAAGAGTTTTGTGCACATATAT 60.676 37.037 22.39 7.63 35.24 0.86
2118 2156 8.813282 CGTACAAGAGTTTTGTGCACATATATA 58.187 33.333 22.39 1.34 35.24 0.86
2159 2197 7.718272 ATAATAAAATGTACATACGGCGTGT 57.282 32.000 24.86 14.45 0.00 4.49
2178 2216 5.865552 GCGTGTACAACCTAACTCAAGAATA 59.134 40.000 0.00 0.00 0.00 1.75
2186 2224 7.119846 ACAACCTAACTCAAGAATATGCAAGTC 59.880 37.037 0.00 0.00 0.00 3.01
2210 2248 7.479603 GTCGGTAATTTCCTTTACATTTCGTTC 59.520 37.037 0.00 0.00 34.42 3.95
2211 2249 7.172875 TCGGTAATTTCCTTTACATTTCGTTCA 59.827 33.333 0.00 0.00 34.42 3.18
2213 2251 8.294577 GGTAATTTCCTTTACATTTCGTTCAGT 58.705 33.333 0.00 0.00 34.42 3.41
2264 2305 8.600668 ACATAGATACAATTGCAGGAGTCATAT 58.399 33.333 5.05 0.00 0.00 1.78
2267 2308 7.285566 AGATACAATTGCAGGAGTCATATGTT 58.714 34.615 5.05 0.00 0.00 2.71
2296 2337 2.383855 CTACTGCTCCTGCTCCTTACT 58.616 52.381 0.00 0.00 40.48 2.24
2306 2355 1.974957 TGCTCCTTACTAGTGGCACAA 59.025 47.619 21.41 4.07 44.16 3.33
2339 2396 1.774110 TCAAGGTTCTGGCAAAAGCA 58.226 45.000 5.46 0.00 0.00 3.91
2345 2402 3.084786 GGTTCTGGCAAAAGCAGTCTAT 58.915 45.455 0.00 0.00 0.00 1.98
2346 2403 3.507622 GGTTCTGGCAAAAGCAGTCTATT 59.492 43.478 0.00 0.00 0.00 1.73
2347 2404 4.021981 GGTTCTGGCAAAAGCAGTCTATTT 60.022 41.667 0.00 0.00 0.00 1.40
2349 2406 4.144297 TCTGGCAAAAGCAGTCTATTTGT 58.856 39.130 0.00 0.00 36.63 2.83
2351 2408 3.636300 TGGCAAAAGCAGTCTATTTGTGT 59.364 39.130 0.00 0.00 36.63 3.72
2360 2417 5.237344 AGCAGTCTATTTGTGTGTCTTTGTC 59.763 40.000 0.00 0.00 0.00 3.18
2380 2437 0.861837 GTCCATATTGCCGAAGAGCG 59.138 55.000 0.00 0.00 40.47 5.03
2382 2439 1.344438 TCCATATTGCCGAAGAGCGAT 59.656 47.619 0.00 0.00 44.57 4.58
2415 2472 1.047596 TGCCACCACCAGCATGTTTT 61.048 50.000 0.00 0.00 33.08 2.43
2416 2473 0.600782 GCCACCACCAGCATGTTTTG 60.601 55.000 0.00 0.00 0.00 2.44
2418 2475 1.138661 CCACCACCAGCATGTTTTGTT 59.861 47.619 0.00 0.00 0.00 2.83
2419 2476 2.363680 CCACCACCAGCATGTTTTGTTA 59.636 45.455 0.00 0.00 0.00 2.41
2420 2477 3.552684 CCACCACCAGCATGTTTTGTTAG 60.553 47.826 0.00 0.00 0.00 2.34
2421 2478 3.068024 CACCACCAGCATGTTTTGTTAGT 59.932 43.478 0.00 0.00 0.00 2.24
2422 2479 3.704061 ACCACCAGCATGTTTTGTTAGTT 59.296 39.130 0.00 0.00 0.00 2.24
2423 2480 4.161377 ACCACCAGCATGTTTTGTTAGTTT 59.839 37.500 0.00 0.00 0.00 2.66
2428 2485 8.132362 CACCAGCATGTTTTGTTAGTTTAGTTA 58.868 33.333 0.00 0.00 0.00 2.24
2430 2487 9.341899 CCAGCATGTTTTGTTAGTTTAGTTATC 57.658 33.333 0.00 0.00 0.00 1.75
2456 2513 5.129485 CACCTCCAATCTAATCAGTAGTGGT 59.871 44.000 0.00 0.00 0.00 4.16
2482 2539 8.588472 TCTCTCTGTATCTCAGTCAAATTTTCA 58.412 33.333 0.00 0.00 43.97 2.69
2486 2543 9.119418 TCTGTATCTCAGTCAAATTTTCACAAA 57.881 29.630 0.00 0.00 43.97 2.83
2503 2560 4.464244 TCACAAACATTCAACCAAAGTGGA 59.536 37.500 0.18 0.00 40.96 4.02
2529 2586 8.535335 AGATCAATATATCCACTCGCATAGTTT 58.465 33.333 0.00 0.00 35.76 2.66
2548 2605 6.573664 AGTTTGTTATTATGAGTTGCAGCA 57.426 33.333 2.55 0.00 0.00 4.41
2556 2613 1.080230 GAGTTGCAGCAGAGCTCGA 60.080 57.895 8.37 0.00 36.40 4.04
2572 2629 3.071479 GCTCGATTTAACAAGGTGTGGA 58.929 45.455 0.00 0.00 0.00 4.02
2573 2630 3.500680 GCTCGATTTAACAAGGTGTGGAA 59.499 43.478 0.00 0.00 0.00 3.53
2574 2631 4.023536 GCTCGATTTAACAAGGTGTGGAAA 60.024 41.667 0.00 0.00 0.00 3.13
2610 2667 3.838565 TGCTGGTCCCATTGAAGTTTAA 58.161 40.909 0.00 0.00 0.00 1.52
2640 2697 4.994852 TGTCTTTCCTAAAGTGTCGATTGG 59.005 41.667 0.00 0.00 39.52 3.16
2641 2698 4.000988 TCTTTCCTAAAGTGTCGATTGGC 58.999 43.478 0.00 0.00 39.52 4.52
2653 2710 8.687824 AAGTGTCGATTGGCTATAAATTTTTG 57.312 30.769 0.00 0.00 0.00 2.44
2657 2714 8.920665 TGTCGATTGGCTATAAATTTTTGTTTG 58.079 29.630 0.00 0.00 0.00 2.93
2706 2763 9.886132 AAATAAATCTCTATAGGTTGTCGTTGT 57.114 29.630 0.00 0.00 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.372087 GCTCTTGGGCGATCTGTTGG 61.372 60.000 0.00 0.00 0.00 3.77
1 2 0.674581 TGCTCTTGGGCGATCTGTTG 60.675 55.000 0.00 0.00 34.52 3.33
2 3 0.674895 GTGCTCTTGGGCGATCTGTT 60.675 55.000 0.00 0.00 34.52 3.16
3 4 1.078848 GTGCTCTTGGGCGATCTGT 60.079 57.895 0.00 0.00 34.52 3.41
4 5 1.078918 TGTGCTCTTGGGCGATCTG 60.079 57.895 0.00 0.00 34.52 2.90
5 6 1.078848 GTGTGCTCTTGGGCGATCT 60.079 57.895 0.00 0.00 34.52 2.75
6 7 1.078848 AGTGTGCTCTTGGGCGATC 60.079 57.895 0.00 0.00 34.52 3.69
7 8 1.376424 CAGTGTGCTCTTGGGCGAT 60.376 57.895 0.00 0.00 34.52 4.58
8 9 2.031012 CAGTGTGCTCTTGGGCGA 59.969 61.111 0.00 0.00 34.52 5.54
9 10 3.730761 GCAGTGTGCTCTTGGGCG 61.731 66.667 0.00 0.00 40.96 6.13
10 11 2.595463 TGCAGTGTGCTCTTGGGC 60.595 61.111 0.00 0.00 45.31 5.36
11 12 2.610694 CGTGCAGTGTGCTCTTGGG 61.611 63.158 0.00 0.00 45.31 4.12
12 13 2.610694 CCGTGCAGTGTGCTCTTGG 61.611 63.158 0.00 0.00 45.31 3.61
13 14 2.941333 CCGTGCAGTGTGCTCTTG 59.059 61.111 0.00 0.00 45.31 3.02
14 15 2.974698 GCCGTGCAGTGTGCTCTT 60.975 61.111 0.00 0.00 45.31 2.85
15 16 3.873026 GAGCCGTGCAGTGTGCTCT 62.873 63.158 15.61 0.00 45.31 4.09
16 17 3.418068 GAGCCGTGCAGTGTGCTC 61.418 66.667 9.94 9.94 45.31 4.26
41 42 1.993391 TGTAGGTGTAGGGCCAGGC 60.993 63.158 6.18 1.26 0.00 4.85
42 43 0.907704 TGTGTAGGTGTAGGGCCAGG 60.908 60.000 6.18 0.00 0.00 4.45
43 44 0.249398 GTGTGTAGGTGTAGGGCCAG 59.751 60.000 6.18 0.00 0.00 4.85
44 45 0.178915 AGTGTGTAGGTGTAGGGCCA 60.179 55.000 6.18 0.00 0.00 5.36
45 46 0.249398 CAGTGTGTAGGTGTAGGGCC 59.751 60.000 0.00 0.00 0.00 5.80
46 47 0.249398 CCAGTGTGTAGGTGTAGGGC 59.751 60.000 0.00 0.00 0.00 5.19
47 48 0.902531 CCCAGTGTGTAGGTGTAGGG 59.097 60.000 0.00 0.00 0.00 3.53
48 49 1.549170 GACCCAGTGTGTAGGTGTAGG 59.451 57.143 0.00 0.00 32.81 3.18
49 50 1.549170 GGACCCAGTGTGTAGGTGTAG 59.451 57.143 0.00 0.00 32.81 2.74
50 51 1.133104 TGGACCCAGTGTGTAGGTGTA 60.133 52.381 0.00 0.00 32.81 2.90
51 52 0.399376 TGGACCCAGTGTGTAGGTGT 60.399 55.000 0.00 0.00 32.81 4.16
52 53 0.034896 GTGGACCCAGTGTGTAGGTG 59.965 60.000 0.00 0.00 32.81 4.00
53 54 1.469335 CGTGGACCCAGTGTGTAGGT 61.469 60.000 0.00 0.00 36.31 3.08
54 55 1.292223 CGTGGACCCAGTGTGTAGG 59.708 63.158 0.00 0.00 0.00 3.18
55 56 1.374252 GCGTGGACCCAGTGTGTAG 60.374 63.158 0.00 0.00 0.00 2.74
56 57 2.134933 TGCGTGGACCCAGTGTGTA 61.135 57.895 0.00 0.00 0.00 2.90
57 58 3.475494 TGCGTGGACCCAGTGTGT 61.475 61.111 0.00 0.00 0.00 3.72
58 59 2.972505 GTGCGTGGACCCAGTGTG 60.973 66.667 0.00 0.00 0.00 3.82
59 60 3.475494 TGTGCGTGGACCCAGTGT 61.475 61.111 0.00 0.00 0.00 3.55
60 61 2.972505 GTGTGCGTGGACCCAGTG 60.973 66.667 0.00 0.00 0.00 3.66
61 62 3.475494 TGTGTGCGTGGACCCAGT 61.475 61.111 0.00 0.00 0.00 4.00
62 63 2.972505 GTGTGTGCGTGGACCCAG 60.973 66.667 0.00 0.00 0.00 4.45
63 64 4.901123 CGTGTGTGCGTGGACCCA 62.901 66.667 0.00 0.00 0.00 4.51
92 93 1.855213 TTTGAGCATGCGTGTGGAGC 61.855 55.000 13.01 0.00 0.00 4.70
93 94 0.110056 GTTTGAGCATGCGTGTGGAG 60.110 55.000 13.01 0.00 0.00 3.86
94 95 1.840630 CGTTTGAGCATGCGTGTGGA 61.841 55.000 13.01 0.00 0.00 4.02
95 96 1.440850 CGTTTGAGCATGCGTGTGG 60.441 57.895 13.01 0.00 0.00 4.17
96 97 2.076628 GCGTTTGAGCATGCGTGTG 61.077 57.895 13.01 2.71 37.05 3.82
97 98 2.252260 GCGTTTGAGCATGCGTGT 59.748 55.556 13.01 0.00 37.05 4.49
98 99 2.251963 TGCGTTTGAGCATGCGTG 59.748 55.556 13.01 0.09 42.92 5.34
104 105 2.124109 TGGGGTTGCGTTTGAGCA 60.124 55.556 0.00 0.00 46.54 4.26
105 106 2.335011 GTGGGGTTGCGTTTGAGC 59.665 61.111 0.00 0.00 37.71 4.26
106 107 1.826054 TGGTGGGGTTGCGTTTGAG 60.826 57.895 0.00 0.00 0.00 3.02
107 108 2.122167 GTGGTGGGGTTGCGTTTGA 61.122 57.895 0.00 0.00 0.00 2.69
108 109 2.415426 GTGGTGGGGTTGCGTTTG 59.585 61.111 0.00 0.00 0.00 2.93
109 110 3.213402 CGTGGTGGGGTTGCGTTT 61.213 61.111 0.00 0.00 0.00 3.60
148 149 4.953868 TGTCGGACGCGTTGGGTG 62.954 66.667 15.53 1.66 0.00 4.61
149 150 4.955774 GTGTCGGACGCGTTGGGT 62.956 66.667 15.53 0.00 0.00 4.51
150 151 4.953868 TGTGTCGGACGCGTTGGG 62.954 66.667 15.53 5.95 0.00 4.12
151 152 2.962786 TTGTGTCGGACGCGTTGG 60.963 61.111 15.53 8.89 0.00 3.77
152 153 2.244382 GTTGTGTCGGACGCGTTG 59.756 61.111 15.53 9.97 0.00 4.10
153 154 2.963320 GGTTGTGTCGGACGCGTT 60.963 61.111 15.53 0.00 0.00 4.84
154 155 4.210093 TGGTTGTGTCGGACGCGT 62.210 61.111 13.85 13.85 0.00 6.01
155 156 3.403057 CTGGTTGTGTCGGACGCG 61.403 66.667 16.13 3.53 0.00 6.01
156 157 3.712881 GCTGGTTGTGTCGGACGC 61.713 66.667 14.55 14.55 0.00 5.19
157 158 3.403057 CGCTGGTTGTGTCGGACG 61.403 66.667 3.34 0.00 0.00 4.79
158 159 3.712881 GCGCTGGTTGTGTCGGAC 61.713 66.667 0.00 0.00 0.00 4.79
159 160 4.228567 TGCGCTGGTTGTGTCGGA 62.229 61.111 9.73 0.00 0.00 4.55
160 161 4.012895 GTGCGCTGGTTGTGTCGG 62.013 66.667 9.73 0.00 0.00 4.79
161 162 4.354212 CGTGCGCTGGTTGTGTCG 62.354 66.667 9.73 0.00 0.00 4.35
162 163 4.666532 GCGTGCGCTGGTTGTGTC 62.667 66.667 9.73 0.00 38.26 3.67
179 180 4.054825 GTTGGGCGCACATGTGGG 62.055 66.667 32.24 32.24 45.07 4.61
180 181 4.403137 CGTTGGGCGCACATGTGG 62.403 66.667 26.55 17.21 0.00 4.17
210 211 3.193267 TGTGAAGATGTTGGCCAATAAGC 59.807 43.478 23.66 16.04 0.00 3.09
211 212 5.047802 ACTTGTGAAGATGTTGGCCAATAAG 60.048 40.000 23.66 12.69 0.00 1.73
212 213 4.832266 ACTTGTGAAGATGTTGGCCAATAA 59.168 37.500 23.66 14.03 0.00 1.40
213 214 4.406456 ACTTGTGAAGATGTTGGCCAATA 58.594 39.130 23.66 20.71 0.00 1.90
214 215 3.233507 ACTTGTGAAGATGTTGGCCAAT 58.766 40.909 23.66 6.32 0.00 3.16
215 216 2.665165 ACTTGTGAAGATGTTGGCCAA 58.335 42.857 16.05 16.05 0.00 4.52
216 217 2.363306 ACTTGTGAAGATGTTGGCCA 57.637 45.000 0.00 0.00 0.00 5.36
217 218 3.733443 AAACTTGTGAAGATGTTGGCC 57.267 42.857 0.00 0.00 0.00 5.36
218 219 4.976116 GTGTAAACTTGTGAAGATGTTGGC 59.024 41.667 0.00 0.00 0.00 4.52
219 220 5.007234 TCGTGTAAACTTGTGAAGATGTTGG 59.993 40.000 0.00 0.00 0.00 3.77
220 221 5.901884 GTCGTGTAAACTTGTGAAGATGTTG 59.098 40.000 0.00 0.00 0.00 3.33
221 222 5.815740 AGTCGTGTAAACTTGTGAAGATGTT 59.184 36.000 0.00 0.00 0.00 2.71
222 223 5.357257 AGTCGTGTAAACTTGTGAAGATGT 58.643 37.500 0.00 0.00 0.00 3.06
223 224 5.907197 AGTCGTGTAAACTTGTGAAGATG 57.093 39.130 0.00 0.00 0.00 2.90
224 225 6.287107 CAAGTCGTGTAAACTTGTGAAGAT 57.713 37.500 7.64 0.00 45.46 2.40
225 226 5.712217 CAAGTCGTGTAAACTTGTGAAGA 57.288 39.130 7.64 0.00 45.46 2.87
232 233 5.899299 AGTACTCACAAGTCGTGTAAACTT 58.101 37.500 0.00 0.00 46.44 2.66
233 234 5.511234 AGTACTCACAAGTCGTGTAAACT 57.489 39.130 0.00 0.00 46.44 2.66
234 235 6.579491 AAAGTACTCACAAGTCGTGTAAAC 57.421 37.500 0.00 0.00 46.44 2.01
235 236 7.546667 AGAAAAAGTACTCACAAGTCGTGTAAA 59.453 33.333 0.00 0.00 46.44 2.01
236 237 7.037438 AGAAAAAGTACTCACAAGTCGTGTAA 58.963 34.615 0.00 0.00 46.44 2.41
237 238 6.567050 AGAAAAAGTACTCACAAGTCGTGTA 58.433 36.000 0.00 0.00 46.44 2.90
238 239 5.416947 AGAAAAAGTACTCACAAGTCGTGT 58.583 37.500 0.00 0.00 46.44 4.49
240 241 6.183360 CCAAAGAAAAAGTACTCACAAGTCGT 60.183 38.462 0.00 0.00 36.92 4.34
241 242 6.183360 ACCAAAGAAAAAGTACTCACAAGTCG 60.183 38.462 0.00 0.00 36.92 4.18
242 243 7.085052 ACCAAAGAAAAAGTACTCACAAGTC 57.915 36.000 0.00 0.00 36.92 3.01
243 244 7.462571 AACCAAAGAAAAAGTACTCACAAGT 57.537 32.000 0.00 0.00 39.66 3.16
244 245 7.913821 GGTAACCAAAGAAAAAGTACTCACAAG 59.086 37.037 0.00 0.00 0.00 3.16
245 246 7.414319 CGGTAACCAAAGAAAAAGTACTCACAA 60.414 37.037 0.00 0.00 0.00 3.33
246 247 6.037391 CGGTAACCAAAGAAAAAGTACTCACA 59.963 38.462 0.00 0.00 0.00 3.58
247 248 6.424683 CGGTAACCAAAGAAAAAGTACTCAC 58.575 40.000 0.00 0.00 0.00 3.51
248 249 5.007921 GCGGTAACCAAAGAAAAAGTACTCA 59.992 40.000 0.00 0.00 0.00 3.41
249 250 5.007921 TGCGGTAACCAAAGAAAAAGTACTC 59.992 40.000 0.00 0.00 0.00 2.59
250 251 4.883006 TGCGGTAACCAAAGAAAAAGTACT 59.117 37.500 0.00 0.00 0.00 2.73
251 252 5.007921 TCTGCGGTAACCAAAGAAAAAGTAC 59.992 40.000 0.00 0.00 0.00 2.73
252 253 5.124645 TCTGCGGTAACCAAAGAAAAAGTA 58.875 37.500 0.00 0.00 0.00 2.24
253 254 3.949113 TCTGCGGTAACCAAAGAAAAAGT 59.051 39.130 0.00 0.00 0.00 2.66
254 255 4.561735 TCTGCGGTAACCAAAGAAAAAG 57.438 40.909 0.00 0.00 0.00 2.27
255 256 5.067936 TGAATCTGCGGTAACCAAAGAAAAA 59.932 36.000 0.00 0.00 0.00 1.94
256 257 4.580995 TGAATCTGCGGTAACCAAAGAAAA 59.419 37.500 0.00 0.00 0.00 2.29
257 258 4.138290 TGAATCTGCGGTAACCAAAGAAA 58.862 39.130 0.00 0.00 0.00 2.52
258 259 3.745799 TGAATCTGCGGTAACCAAAGAA 58.254 40.909 0.00 0.00 0.00 2.52
259 260 3.410631 TGAATCTGCGGTAACCAAAGA 57.589 42.857 0.00 0.00 0.00 2.52
260 261 4.701956 AATGAATCTGCGGTAACCAAAG 57.298 40.909 0.00 0.00 0.00 2.77
261 262 6.375736 TGATAAATGAATCTGCGGTAACCAAA 59.624 34.615 0.00 0.00 0.00 3.28
262 263 5.883115 TGATAAATGAATCTGCGGTAACCAA 59.117 36.000 0.00 0.00 0.00 3.67
263 264 5.432645 TGATAAATGAATCTGCGGTAACCA 58.567 37.500 0.00 0.00 0.00 3.67
264 265 6.183360 TGTTGATAAATGAATCTGCGGTAACC 60.183 38.462 0.00 0.00 0.00 2.85
265 266 6.687105 GTGTTGATAAATGAATCTGCGGTAAC 59.313 38.462 0.00 0.00 0.00 2.50
266 267 6.456315 CGTGTTGATAAATGAATCTGCGGTAA 60.456 38.462 0.00 0.00 0.00 2.85
267 268 5.006261 CGTGTTGATAAATGAATCTGCGGTA 59.994 40.000 0.00 0.00 0.00 4.02
268 269 4.201812 CGTGTTGATAAATGAATCTGCGGT 60.202 41.667 0.00 0.00 0.00 5.68
269 270 4.033932 TCGTGTTGATAAATGAATCTGCGG 59.966 41.667 0.00 0.00 0.00 5.69
270 271 5.142635 TCGTGTTGATAAATGAATCTGCG 57.857 39.130 0.00 0.00 0.00 5.18
271 272 5.911280 CCATCGTGTTGATAAATGAATCTGC 59.089 40.000 0.00 0.00 34.83 4.26
272 273 6.260714 TCCCATCGTGTTGATAAATGAATCTG 59.739 38.462 0.00 0.00 34.83 2.90
273 274 6.356556 TCCCATCGTGTTGATAAATGAATCT 58.643 36.000 0.00 0.00 34.83 2.40
274 275 6.618287 TCCCATCGTGTTGATAAATGAATC 57.382 37.500 0.00 0.00 34.83 2.52
275 276 6.207417 GGATCCCATCGTGTTGATAAATGAAT 59.793 38.462 0.00 0.00 34.83 2.57
276 277 5.530915 GGATCCCATCGTGTTGATAAATGAA 59.469 40.000 0.00 0.00 34.83 2.57
277 278 5.063204 GGATCCCATCGTGTTGATAAATGA 58.937 41.667 0.00 0.00 34.83 2.57
278 279 4.821260 TGGATCCCATCGTGTTGATAAATG 59.179 41.667 9.90 0.00 34.83 2.32
279 280 5.047566 TGGATCCCATCGTGTTGATAAAT 57.952 39.130 9.90 0.00 34.83 1.40
280 281 4.450976 CTGGATCCCATCGTGTTGATAAA 58.549 43.478 9.90 0.00 34.83 1.40
281 282 3.181455 CCTGGATCCCATCGTGTTGATAA 60.181 47.826 9.90 0.00 34.83 1.75
282 283 2.368548 CCTGGATCCCATCGTGTTGATA 59.631 50.000 9.90 0.00 34.83 2.15
283 284 1.141657 CCTGGATCCCATCGTGTTGAT 59.858 52.381 9.90 0.00 38.01 2.57
284 285 0.541392 CCTGGATCCCATCGTGTTGA 59.459 55.000 9.90 0.00 30.82 3.18
285 286 0.253044 ACCTGGATCCCATCGTGTTG 59.747 55.000 9.90 0.00 30.82 3.33
286 287 0.253044 CACCTGGATCCCATCGTGTT 59.747 55.000 9.90 0.00 32.46 3.32
287 288 0.617535 TCACCTGGATCCCATCGTGT 60.618 55.000 9.90 0.00 36.05 4.49
288 289 0.541392 TTCACCTGGATCCCATCGTG 59.459 55.000 9.90 9.96 35.98 4.35
289 290 1.511613 ATTCACCTGGATCCCATCGT 58.488 50.000 9.90 0.00 30.82 3.73
290 291 3.324846 TCTTATTCACCTGGATCCCATCG 59.675 47.826 9.90 0.00 30.82 3.84
291 292 4.982241 TCTTATTCACCTGGATCCCATC 57.018 45.455 9.90 0.00 30.82 3.51
292 293 5.135020 ACAATCTTATTCACCTGGATCCCAT 59.865 40.000 9.90 0.00 30.82 4.00
293 294 4.478317 ACAATCTTATTCACCTGGATCCCA 59.522 41.667 9.90 0.00 0.00 4.37
294 295 4.823989 CACAATCTTATTCACCTGGATCCC 59.176 45.833 9.90 0.00 0.00 3.85
295 296 5.684704 TCACAATCTTATTCACCTGGATCC 58.315 41.667 4.20 4.20 0.00 3.36
296 297 6.481644 GTCTCACAATCTTATTCACCTGGATC 59.518 42.308 0.00 0.00 0.00 3.36
297 298 6.157645 AGTCTCACAATCTTATTCACCTGGAT 59.842 38.462 0.00 0.00 0.00 3.41
298 299 5.485353 AGTCTCACAATCTTATTCACCTGGA 59.515 40.000 0.00 0.00 0.00 3.86
299 300 5.738909 AGTCTCACAATCTTATTCACCTGG 58.261 41.667 0.00 0.00 0.00 4.45
300 301 6.758886 GGTAGTCTCACAATCTTATTCACCTG 59.241 42.308 0.00 0.00 0.00 4.00
301 302 6.127026 GGGTAGTCTCACAATCTTATTCACCT 60.127 42.308 0.00 0.00 0.00 4.00
302 303 6.049790 GGGTAGTCTCACAATCTTATTCACC 58.950 44.000 0.00 0.00 0.00 4.02
303 304 6.640518 TGGGTAGTCTCACAATCTTATTCAC 58.359 40.000 0.00 0.00 0.00 3.18
304 305 6.867519 TGGGTAGTCTCACAATCTTATTCA 57.132 37.500 0.00 0.00 0.00 2.57
305 306 8.643324 ACTATGGGTAGTCTCACAATCTTATTC 58.357 37.037 0.00 0.00 36.41 1.75
306 307 8.424918 CACTATGGGTAGTCTCACAATCTTATT 58.575 37.037 0.00 0.00 39.12 1.40
307 308 7.015682 CCACTATGGGTAGTCTCACAATCTTAT 59.984 40.741 0.00 0.00 39.12 1.73
308 309 6.323996 CCACTATGGGTAGTCTCACAATCTTA 59.676 42.308 0.00 0.00 39.12 2.10
309 310 5.129485 CCACTATGGGTAGTCTCACAATCTT 59.871 44.000 0.00 0.00 39.12 2.40
310 311 4.651503 CCACTATGGGTAGTCTCACAATCT 59.348 45.833 0.00 0.00 39.12 2.40
311 312 4.950050 CCACTATGGGTAGTCTCACAATC 58.050 47.826 0.00 0.00 39.12 2.67
325 326 9.986157 TTACTACCTATATTACTCCCACTATGG 57.014 37.037 0.00 0.00 37.25 2.74
329 330 9.531158 GATGTTACTACCTATATTACTCCCACT 57.469 37.037 0.00 0.00 0.00 4.00
330 331 9.305555 TGATGTTACTACCTATATTACTCCCAC 57.694 37.037 0.00 0.00 0.00 4.61
331 332 9.305555 GTGATGTTACTACCTATATTACTCCCA 57.694 37.037 0.00 0.00 0.00 4.37
332 333 9.305555 TGTGATGTTACTACCTATATTACTCCC 57.694 37.037 0.00 0.00 0.00 4.30
342 343 9.516546 CCTAGATATGTGTGATGTTACTACCTA 57.483 37.037 0.00 0.00 0.00 3.08
343 344 8.005388 ACCTAGATATGTGTGATGTTACTACCT 58.995 37.037 0.00 0.00 0.00 3.08
344 345 8.179509 ACCTAGATATGTGTGATGTTACTACC 57.820 38.462 0.00 0.00 0.00 3.18
364 365 9.640963 GCATACTACACCATCTATTTAACCTAG 57.359 37.037 0.00 0.00 0.00 3.02
365 366 9.150028 TGCATACTACACCATCTATTTAACCTA 57.850 33.333 0.00 0.00 0.00 3.08
366 367 8.029782 TGCATACTACACCATCTATTTAACCT 57.970 34.615 0.00 0.00 0.00 3.50
367 368 8.671384 TTGCATACTACACCATCTATTTAACC 57.329 34.615 0.00 0.00 0.00 2.85
375 376 8.978874 TTCATTTATTGCATACTACACCATCT 57.021 30.769 0.00 0.00 0.00 2.90
376 377 9.056005 TCTTCATTTATTGCATACTACACCATC 57.944 33.333 0.00 0.00 0.00 3.51
377 378 8.978874 TCTTCATTTATTGCATACTACACCAT 57.021 30.769 0.00 0.00 0.00 3.55
378 379 8.800370 TTCTTCATTTATTGCATACTACACCA 57.200 30.769 0.00 0.00 0.00 4.17
379 380 9.722056 CTTTCTTCATTTATTGCATACTACACC 57.278 33.333 0.00 0.00 0.00 4.16
395 396 9.750125 GTTACCACTTTGATTTCTTTCTTCATT 57.250 29.630 0.00 0.00 0.00 2.57
396 397 8.912988 TGTTACCACTTTGATTTCTTTCTTCAT 58.087 29.630 0.00 0.00 0.00 2.57
397 398 8.287439 TGTTACCACTTTGATTTCTTTCTTCA 57.713 30.769 0.00 0.00 0.00 3.02
400 401 9.014297 CCTATGTTACCACTTTGATTTCTTTCT 57.986 33.333 0.00 0.00 0.00 2.52
401 402 8.244113 CCCTATGTTACCACTTTGATTTCTTTC 58.756 37.037 0.00 0.00 0.00 2.62
402 403 7.178451 CCCCTATGTTACCACTTTGATTTCTTT 59.822 37.037 0.00 0.00 0.00 2.52
403 404 6.663523 CCCCTATGTTACCACTTTGATTTCTT 59.336 38.462 0.00 0.00 0.00 2.52
404 405 6.187682 CCCCTATGTTACCACTTTGATTTCT 58.812 40.000 0.00 0.00 0.00 2.52
405 406 5.359860 CCCCCTATGTTACCACTTTGATTTC 59.640 44.000 0.00 0.00 0.00 2.17
406 407 5.222463 ACCCCCTATGTTACCACTTTGATTT 60.222 40.000 0.00 0.00 0.00 2.17
407 408 4.293901 ACCCCCTATGTTACCACTTTGATT 59.706 41.667 0.00 0.00 0.00 2.57
408 409 3.856206 ACCCCCTATGTTACCACTTTGAT 59.144 43.478 0.00 0.00 0.00 2.57
409 410 3.009695 CACCCCCTATGTTACCACTTTGA 59.990 47.826 0.00 0.00 0.00 2.69
410 411 3.245122 ACACCCCCTATGTTACCACTTTG 60.245 47.826 0.00 0.00 0.00 2.77
411 412 2.990998 ACACCCCCTATGTTACCACTTT 59.009 45.455 0.00 0.00 0.00 2.66
412 413 2.639487 ACACCCCCTATGTTACCACTT 58.361 47.619 0.00 0.00 0.00 3.16
413 414 2.354261 ACACCCCCTATGTTACCACT 57.646 50.000 0.00 0.00 0.00 4.00
414 415 3.086282 CAAACACCCCCTATGTTACCAC 58.914 50.000 0.00 0.00 39.36 4.16
415 416 2.041891 CCAAACACCCCCTATGTTACCA 59.958 50.000 0.00 0.00 39.36 3.25
416 417 2.042026 ACCAAACACCCCCTATGTTACC 59.958 50.000 0.00 0.00 39.36 2.85
417 418 3.444792 ACCAAACACCCCCTATGTTAC 57.555 47.619 0.00 0.00 39.36 2.50
418 419 3.398292 TGAACCAAACACCCCCTATGTTA 59.602 43.478 0.00 0.00 39.36 2.41
419 420 2.178106 TGAACCAAACACCCCCTATGTT 59.822 45.455 0.00 0.00 42.07 2.71
420 421 1.783979 TGAACCAAACACCCCCTATGT 59.216 47.619 0.00 0.00 0.00 2.29
421 422 2.446435 CTGAACCAAACACCCCCTATG 58.554 52.381 0.00 0.00 0.00 2.23
422 423 1.357761 CCTGAACCAAACACCCCCTAT 59.642 52.381 0.00 0.00 0.00 2.57
423 424 0.774908 CCTGAACCAAACACCCCCTA 59.225 55.000 0.00 0.00 0.00 3.53
424 425 1.541672 CCTGAACCAAACACCCCCT 59.458 57.895 0.00 0.00 0.00 4.79
425 426 1.533033 CCCTGAACCAAACACCCCC 60.533 63.158 0.00 0.00 0.00 5.40
426 427 0.114364 ATCCCTGAACCAAACACCCC 59.886 55.000 0.00 0.00 0.00 4.95
427 428 2.009681 AATCCCTGAACCAAACACCC 57.990 50.000 0.00 0.00 0.00 4.61
428 429 4.415881 AAAAATCCCTGAACCAAACACC 57.584 40.909 0.00 0.00 0.00 4.16
452 453 5.239351 GGGACTTTTTCTAGTCTCTTGGAC 58.761 45.833 0.00 0.00 41.50 4.02
453 454 5.485209 GGGACTTTTTCTAGTCTCTTGGA 57.515 43.478 0.00 0.00 41.50 3.53
458 459 8.905660 ACTTTTTAGGGACTTTTTCTAGTCTC 57.094 34.615 0.00 0.00 44.42 3.36
459 460 7.937942 GGACTTTTTAGGGACTTTTTCTAGTCT 59.062 37.037 0.00 0.00 43.26 3.24
460 461 7.174599 GGGACTTTTTAGGGACTTTTTCTAGTC 59.825 40.741 0.00 0.00 43.05 2.59
461 462 7.002879 GGGACTTTTTAGGGACTTTTTCTAGT 58.997 38.462 0.00 0.00 41.75 2.57
462 463 7.232188 AGGGACTTTTTAGGGACTTTTTCTAG 58.768 38.462 0.00 0.00 34.75 2.43
463 464 7.157947 AGGGACTTTTTAGGGACTTTTTCTA 57.842 36.000 0.00 0.00 34.75 2.10
464 465 6.027025 AGGGACTTTTTAGGGACTTTTTCT 57.973 37.500 0.00 0.00 34.75 2.52
465 466 6.433404 CCTAGGGACTTTTTAGGGACTTTTTC 59.567 42.308 0.00 0.00 39.49 2.29
466 467 6.103649 TCCTAGGGACTTTTTAGGGACTTTTT 59.896 38.462 9.46 0.00 39.49 1.94
467 468 5.613973 TCCTAGGGACTTTTTAGGGACTTTT 59.386 40.000 9.46 0.00 39.49 2.27
468 469 5.167921 TCCTAGGGACTTTTTAGGGACTTT 58.832 41.667 9.46 0.00 39.49 2.66
469 470 4.771338 TCCTAGGGACTTTTTAGGGACTT 58.229 43.478 9.46 0.00 39.49 3.01
470 471 4.431158 TCCTAGGGACTTTTTAGGGACT 57.569 45.455 9.46 0.00 41.75 3.85
471 472 5.191124 TGATTCCTAGGGACTTTTTAGGGAC 59.809 44.000 9.46 0.00 41.75 4.46
472 473 5.355711 TGATTCCTAGGGACTTTTTAGGGA 58.644 41.667 9.46 0.00 41.75 4.20
473 474 5.710409 TGATTCCTAGGGACTTTTTAGGG 57.290 43.478 9.46 0.00 41.75 3.53
474 475 6.093633 CGTTTGATTCCTAGGGACTTTTTAGG 59.906 42.308 9.46 0.00 41.75 2.69
475 476 6.093633 CCGTTTGATTCCTAGGGACTTTTTAG 59.906 42.308 9.46 0.00 41.75 1.85
476 477 5.941647 CCGTTTGATTCCTAGGGACTTTTTA 59.058 40.000 9.46 0.00 41.75 1.52
477 478 4.765339 CCGTTTGATTCCTAGGGACTTTTT 59.235 41.667 9.46 0.00 41.75 1.94
478 479 4.332828 CCGTTTGATTCCTAGGGACTTTT 58.667 43.478 9.46 0.00 41.75 2.27
479 480 3.308188 CCCGTTTGATTCCTAGGGACTTT 60.308 47.826 9.46 0.00 41.26 2.66
480 481 2.238898 CCCGTTTGATTCCTAGGGACTT 59.761 50.000 9.46 0.00 41.26 3.01
481 482 1.838077 CCCGTTTGATTCCTAGGGACT 59.162 52.381 9.46 0.00 41.26 3.85
482 483 1.835531 TCCCGTTTGATTCCTAGGGAC 59.164 52.381 9.46 1.40 42.46 4.46
483 484 2.116238 CTCCCGTTTGATTCCTAGGGA 58.884 52.381 9.46 0.00 44.85 4.20
484 485 1.141053 CCTCCCGTTTGATTCCTAGGG 59.859 57.143 9.46 0.00 40.16 3.53
485 486 1.141053 CCCTCCCGTTTGATTCCTAGG 59.859 57.143 0.82 0.82 0.00 3.02
486 487 2.116238 TCCCTCCCGTTTGATTCCTAG 58.884 52.381 0.00 0.00 0.00 3.02
487 488 1.835531 GTCCCTCCCGTTTGATTCCTA 59.164 52.381 0.00 0.00 0.00 2.94
488 489 0.618981 GTCCCTCCCGTTTGATTCCT 59.381 55.000 0.00 0.00 0.00 3.36
489 490 0.618981 AGTCCCTCCCGTTTGATTCC 59.381 55.000 0.00 0.00 0.00 3.01
490 491 2.491675 AAGTCCCTCCCGTTTGATTC 57.508 50.000 0.00 0.00 0.00 2.52
491 492 2.971901 AAAGTCCCTCCCGTTTGATT 57.028 45.000 0.00 0.00 0.00 2.57
492 493 2.971901 AAAAGTCCCTCCCGTTTGAT 57.028 45.000 0.00 0.00 0.00 2.57
493 494 2.173996 AGAAAAAGTCCCTCCCGTTTGA 59.826 45.455 0.00 0.00 0.00 2.69
494 495 2.583143 AGAAAAAGTCCCTCCCGTTTG 58.417 47.619 0.00 0.00 0.00 2.93
495 496 4.652679 ATAGAAAAAGTCCCTCCCGTTT 57.347 40.909 0.00 0.00 0.00 3.60
496 497 4.163649 CCTATAGAAAAAGTCCCTCCCGTT 59.836 45.833 0.00 0.00 0.00 4.44
497 498 3.710165 CCTATAGAAAAAGTCCCTCCCGT 59.290 47.826 0.00 0.00 0.00 5.28
498 499 3.071167 CCCTATAGAAAAAGTCCCTCCCG 59.929 52.174 0.00 0.00 0.00 5.14
499 500 4.102838 GTCCCTATAGAAAAAGTCCCTCCC 59.897 50.000 0.00 0.00 0.00 4.30
500 501 4.969999 AGTCCCTATAGAAAAAGTCCCTCC 59.030 45.833 0.00 0.00 0.00 4.30
501 502 7.068061 TCTAGTCCCTATAGAAAAAGTCCCTC 58.932 42.308 0.00 0.00 0.00 4.30
502 503 6.994582 TCTAGTCCCTATAGAAAAAGTCCCT 58.005 40.000 0.00 0.00 0.00 4.20
503 504 7.672122 TTCTAGTCCCTATAGAAAAAGTCCC 57.328 40.000 0.00 0.00 36.55 4.46
510 511 9.771140 AGAGTCTTTTTCTAGTCCCTATAGAAA 57.229 33.333 0.00 4.48 43.86 2.52
512 513 9.850198 GTAGAGTCTTTTTCTAGTCCCTATAGA 57.150 37.037 0.00 0.00 0.00 1.98
513 514 9.856162 AGTAGAGTCTTTTTCTAGTCCCTATAG 57.144 37.037 0.00 0.00 0.00 1.31
515 516 9.856162 CTAGTAGAGTCTTTTTCTAGTCCCTAT 57.144 37.037 0.00 0.00 33.84 2.57
516 517 9.055689 TCTAGTAGAGTCTTTTTCTAGTCCCTA 57.944 37.037 0.00 0.00 33.84 3.53
517 518 7.931046 TCTAGTAGAGTCTTTTTCTAGTCCCT 58.069 38.462 0.00 0.00 33.84 4.20
518 519 8.048514 TCTCTAGTAGAGTCTTTTTCTAGTCCC 58.951 40.741 23.51 0.00 42.83 4.46
519 520 9.106070 CTCTCTAGTAGAGTCTTTTTCTAGTCC 57.894 40.741 23.51 0.00 45.85 3.85
578 579 4.202326 TGTTTGGTTCAGAAGTCCTAGGAC 60.202 45.833 31.29 31.29 44.86 3.85
579 580 3.971305 TGTTTGGTTCAGAAGTCCTAGGA 59.029 43.478 7.62 7.62 0.00 2.94
580 581 4.065789 GTGTTTGGTTCAGAAGTCCTAGG 58.934 47.826 0.82 0.82 0.00 3.02
581 582 4.065789 GGTGTTTGGTTCAGAAGTCCTAG 58.934 47.826 0.00 0.00 0.00 3.02
582 583 3.181448 GGGTGTTTGGTTCAGAAGTCCTA 60.181 47.826 0.00 0.00 0.00 2.94
583 584 2.422945 GGGTGTTTGGTTCAGAAGTCCT 60.423 50.000 0.00 0.00 0.00 3.85
584 585 1.954382 GGGTGTTTGGTTCAGAAGTCC 59.046 52.381 0.00 0.00 0.00 3.85
585 586 1.954382 GGGGTGTTTGGTTCAGAAGTC 59.046 52.381 0.00 0.00 0.00 3.01
586 587 1.411074 GGGGGTGTTTGGTTCAGAAGT 60.411 52.381 0.00 0.00 0.00 3.01
587 588 1.328279 GGGGGTGTTTGGTTCAGAAG 58.672 55.000 0.00 0.00 0.00 2.85
588 589 0.631753 TGGGGGTGTTTGGTTCAGAA 59.368 50.000 0.00 0.00 0.00 3.02
589 590 0.856982 ATGGGGGTGTTTGGTTCAGA 59.143 50.000 0.00 0.00 0.00 3.27
590 591 2.446435 CTATGGGGGTGTTTGGTTCAG 58.554 52.381 0.00 0.00 0.00 3.02
591 592 1.549037 GCTATGGGGGTGTTTGGTTCA 60.549 52.381 0.00 0.00 0.00 3.18
592 593 1.182667 GCTATGGGGGTGTTTGGTTC 58.817 55.000 0.00 0.00 0.00 3.62
593 594 0.783850 AGCTATGGGGGTGTTTGGTT 59.216 50.000 0.00 0.00 0.00 3.67
594 595 1.564348 CTAGCTATGGGGGTGTTTGGT 59.436 52.381 0.00 0.00 0.00 3.67
595 596 1.564348 ACTAGCTATGGGGGTGTTTGG 59.436 52.381 0.00 0.00 0.00 3.28
596 597 3.366052 AACTAGCTATGGGGGTGTTTG 57.634 47.619 0.00 0.00 0.00 2.93
597 598 3.201487 GGTAACTAGCTATGGGGGTGTTT 59.799 47.826 0.00 0.00 0.00 2.83
598 599 2.775960 GGTAACTAGCTATGGGGGTGTT 59.224 50.000 0.00 0.00 0.00 3.32
599 600 2.293318 TGGTAACTAGCTATGGGGGTGT 60.293 50.000 0.00 0.00 37.61 4.16
600 601 2.104281 GTGGTAACTAGCTATGGGGGTG 59.896 54.545 0.00 0.00 37.61 4.61
601 602 2.022330 AGTGGTAACTAGCTATGGGGGT 60.022 50.000 0.00 0.00 33.79 4.95
602 603 2.690840 AGTGGTAACTAGCTATGGGGG 58.309 52.381 0.00 0.00 33.79 5.40
612 613 9.910267 TGATGTTACTCATACTAGTGGTAACTA 57.090 33.333 25.12 18.35 41.26 2.24
613 614 8.684520 GTGATGTTACTCATACTAGTGGTAACT 58.315 37.037 25.12 17.82 41.26 2.24
614 615 8.464404 TGTGATGTTACTCATACTAGTGGTAAC 58.536 37.037 21.92 21.92 41.14 2.50
615 616 8.464404 GTGTGATGTTACTCATACTAGTGGTAA 58.536 37.037 5.39 6.99 36.83 2.85
616 617 7.612633 TGTGTGATGTTACTCATACTAGTGGTA 59.387 37.037 5.39 1.10 37.92 3.25
617 618 6.436218 TGTGTGATGTTACTCATACTAGTGGT 59.564 38.462 5.39 2.05 37.92 4.16
618 619 6.863275 TGTGTGATGTTACTCATACTAGTGG 58.137 40.000 5.39 0.00 37.92 4.00
623 624 9.755804 CTTGATATGTGTGATGTTACTCATACT 57.244 33.333 10.75 3.32 38.84 2.12
624 625 8.982685 CCTTGATATGTGTGATGTTACTCATAC 58.017 37.037 0.00 5.35 38.84 2.39
625 626 7.657354 GCCTTGATATGTGTGATGTTACTCATA 59.343 37.037 0.00 0.00 39.73 2.15
626 627 6.484643 GCCTTGATATGTGTGATGTTACTCAT 59.515 38.462 0.00 0.00 38.11 2.90
627 628 5.817296 GCCTTGATATGTGTGATGTTACTCA 59.183 40.000 0.00 0.00 0.00 3.41
628 629 5.817296 TGCCTTGATATGTGTGATGTTACTC 59.183 40.000 0.00 0.00 0.00 2.59
629 630 5.744171 TGCCTTGATATGTGTGATGTTACT 58.256 37.500 0.00 0.00 0.00 2.24
630 631 6.316140 TCTTGCCTTGATATGTGTGATGTTAC 59.684 38.462 0.00 0.00 0.00 2.50
631 632 6.413892 TCTTGCCTTGATATGTGTGATGTTA 58.586 36.000 0.00 0.00 0.00 2.41
632 633 5.255687 TCTTGCCTTGATATGTGTGATGTT 58.744 37.500 0.00 0.00 0.00 2.71
633 634 4.847198 TCTTGCCTTGATATGTGTGATGT 58.153 39.130 0.00 0.00 0.00 3.06
634 635 5.298527 ACATCTTGCCTTGATATGTGTGATG 59.701 40.000 0.00 0.00 35.23 3.07
635 636 5.298527 CACATCTTGCCTTGATATGTGTGAT 59.701 40.000 0.00 0.00 41.46 3.06
636 637 4.637091 CACATCTTGCCTTGATATGTGTGA 59.363 41.667 0.00 0.00 41.46 3.58
637 638 4.916870 CACATCTTGCCTTGATATGTGTG 58.083 43.478 0.00 0.00 41.46 3.82
640 641 5.108187 AGACACATCTTGCCTTGATATGT 57.892 39.130 0.00 0.00 34.70 2.29
641 642 7.064371 GCTATAGACACATCTTGCCTTGATATG 59.936 40.741 3.21 0.00 36.29 1.78
642 643 7.102346 GCTATAGACACATCTTGCCTTGATAT 58.898 38.462 3.21 0.00 36.29 1.63
643 644 6.459066 GCTATAGACACATCTTGCCTTGATA 58.541 40.000 3.21 0.00 36.29 2.15
644 645 5.303971 GCTATAGACACATCTTGCCTTGAT 58.696 41.667 3.21 0.00 36.29 2.57
645 646 4.443457 GGCTATAGACACATCTTGCCTTGA 60.443 45.833 3.21 0.00 39.50 3.02
646 647 3.812053 GGCTATAGACACATCTTGCCTTG 59.188 47.826 3.21 0.00 39.50 3.61
647 648 3.713764 AGGCTATAGACACATCTTGCCTT 59.286 43.478 8.68 0.00 45.01 4.35
648 649 3.312890 AGGCTATAGACACATCTTGCCT 58.687 45.455 8.68 0.00 43.78 4.75
649 650 3.760580 AGGCTATAGACACATCTTGCC 57.239 47.619 8.68 0.00 41.26 4.52
650 651 8.833231 TTTATTAGGCTATAGACACATCTTGC 57.167 34.615 8.68 0.00 36.29 4.01
656 657 9.764363 CACTTCATTTATTAGGCTATAGACACA 57.236 33.333 8.68 0.00 0.00 3.72
657 658 8.713271 GCACTTCATTTATTAGGCTATAGACAC 58.287 37.037 8.68 0.00 0.00 3.67
658 659 8.651389 AGCACTTCATTTATTAGGCTATAGACA 58.349 33.333 8.68 0.00 0.00 3.41
659 660 8.930760 CAGCACTTCATTTATTAGGCTATAGAC 58.069 37.037 3.21 0.00 0.00 2.59
660 661 7.604164 GCAGCACTTCATTTATTAGGCTATAGA 59.396 37.037 3.21 0.00 0.00 1.98
661 662 7.388776 TGCAGCACTTCATTTATTAGGCTATAG 59.611 37.037 0.00 0.00 0.00 1.31
662 663 7.223584 TGCAGCACTTCATTTATTAGGCTATA 58.776 34.615 0.00 0.00 0.00 1.31
663 664 6.064060 TGCAGCACTTCATTTATTAGGCTAT 58.936 36.000 0.00 0.00 0.00 2.97
664 665 5.436175 TGCAGCACTTCATTTATTAGGCTA 58.564 37.500 0.00 0.00 0.00 3.93
665 666 4.272489 TGCAGCACTTCATTTATTAGGCT 58.728 39.130 0.00 0.00 0.00 4.58
666 667 4.637483 TGCAGCACTTCATTTATTAGGC 57.363 40.909 0.00 0.00 0.00 3.93
667 668 9.023967 GTAAAATGCAGCACTTCATTTATTAGG 57.976 33.333 8.36 0.00 40.73 2.69
668 669 9.023967 GGTAAAATGCAGCACTTCATTTATTAG 57.976 33.333 8.36 0.00 40.73 1.73
669 670 8.526978 TGGTAAAATGCAGCACTTCATTTATTA 58.473 29.630 8.36 0.00 40.73 0.98
670 671 7.331687 GTGGTAAAATGCAGCACTTCATTTATT 59.668 33.333 8.36 0.00 40.73 1.40
671 672 6.813152 GTGGTAAAATGCAGCACTTCATTTAT 59.187 34.615 8.36 3.44 40.73 1.40
672 673 6.155827 GTGGTAAAATGCAGCACTTCATTTA 58.844 36.000 8.36 0.00 40.73 1.40
673 674 4.990426 GTGGTAAAATGCAGCACTTCATTT 59.010 37.500 0.00 2.93 42.67 2.32
674 675 4.039004 TGTGGTAAAATGCAGCACTTCATT 59.961 37.500 0.00 0.00 43.21 2.57
675 676 3.573538 TGTGGTAAAATGCAGCACTTCAT 59.426 39.130 0.00 0.00 43.21 2.57
676 677 2.954989 TGTGGTAAAATGCAGCACTTCA 59.045 40.909 0.00 0.00 43.21 3.02
677 678 3.243367 TGTGTGGTAAAATGCAGCACTTC 60.243 43.478 0.00 0.00 43.21 3.01
678 679 2.692557 TGTGTGGTAAAATGCAGCACTT 59.307 40.909 0.00 0.00 43.21 3.16
679 680 2.305928 TGTGTGGTAAAATGCAGCACT 58.694 42.857 0.00 0.00 43.21 4.40
680 681 2.791383 TGTGTGGTAAAATGCAGCAC 57.209 45.000 0.00 0.00 43.13 4.40
681 682 4.462132 ACATATGTGTGGTAAAATGCAGCA 59.538 37.500 7.78 0.00 37.14 4.41
682 683 4.997565 ACATATGTGTGGTAAAATGCAGC 58.002 39.130 7.78 0.00 37.14 5.25
683 684 7.761409 AGTAACATATGTGTGGTAAAATGCAG 58.239 34.615 9.63 0.00 38.92 4.41
684 685 7.148154 GGAGTAACATATGTGTGGTAAAATGCA 60.148 37.037 9.63 0.00 38.92 3.96
685 686 7.193595 GGAGTAACATATGTGTGGTAAAATGC 58.806 38.462 9.63 0.00 38.92 3.56
686 687 7.201785 GGGGAGTAACATATGTGTGGTAAAATG 60.202 40.741 9.63 0.00 38.92 2.32
687 688 6.831868 GGGGAGTAACATATGTGTGGTAAAAT 59.168 38.462 9.63 0.00 38.92 1.82
688 689 6.181908 GGGGAGTAACATATGTGTGGTAAAA 58.818 40.000 9.63 0.00 38.92 1.52
689 690 5.251005 TGGGGAGTAACATATGTGTGGTAAA 59.749 40.000 9.63 0.00 38.92 2.01
690 691 4.783763 TGGGGAGTAACATATGTGTGGTAA 59.216 41.667 9.63 0.00 38.92 2.85
691 692 4.162698 GTGGGGAGTAACATATGTGTGGTA 59.837 45.833 9.63 0.00 38.92 3.25
692 693 3.054655 GTGGGGAGTAACATATGTGTGGT 60.055 47.826 9.63 0.00 38.92 4.16
693 694 3.199946 AGTGGGGAGTAACATATGTGTGG 59.800 47.826 9.63 0.00 38.92 4.17
694 695 4.487714 AGTGGGGAGTAACATATGTGTG 57.512 45.455 9.63 0.00 38.92 3.82
695 696 7.924358 TTATAGTGGGGAGTAACATATGTGT 57.076 36.000 9.63 2.63 41.28 3.72
696 697 7.878127 CCTTTATAGTGGGGAGTAACATATGTG 59.122 40.741 9.63 0.00 0.00 3.21
697 698 7.571357 ACCTTTATAGTGGGGAGTAACATATGT 59.429 37.037 1.41 1.41 0.00 2.29
698 699 7.974504 ACCTTTATAGTGGGGAGTAACATATG 58.025 38.462 0.00 0.00 0.00 1.78
699 700 9.322769 CTACCTTTATAGTGGGGAGTAACATAT 57.677 37.037 0.00 0.00 0.00 1.78
700 701 8.291745 ACTACCTTTATAGTGGGGAGTAACATA 58.708 37.037 0.00 0.00 42.00 2.29
701 702 7.137567 ACTACCTTTATAGTGGGGAGTAACAT 58.862 38.462 0.00 0.00 42.00 2.71
702 703 6.505754 ACTACCTTTATAGTGGGGAGTAACA 58.494 40.000 0.00 0.00 42.00 2.41
703 704 8.539117 TTACTACCTTTATAGTGGGGAGTAAC 57.461 38.462 15.57 0.00 45.93 2.50
705 706 7.651607 TGTTACTACCTTTATAGTGGGGAGTA 58.348 38.462 8.04 8.04 42.00 2.59
706 707 6.505754 TGTTACTACCTTTATAGTGGGGAGT 58.494 40.000 9.52 9.52 45.34 3.85
707 708 7.613551 ATGTTACTACCTTTATAGTGGGGAG 57.386 40.000 0.00 0.00 36.09 4.30
708 709 8.291745 ACTATGTTACTACCTTTATAGTGGGGA 58.708 37.037 0.00 0.00 36.09 4.81
709 710 8.488308 ACTATGTTACTACCTTTATAGTGGGG 57.512 38.462 0.00 0.00 36.09 4.96
736 737 9.705103 ACAATGGGTAGTAGTATAGACAAGTAA 57.295 33.333 0.00 0.00 0.00 2.24
737 738 9.128404 CACAATGGGTAGTAGTATAGACAAGTA 57.872 37.037 0.00 0.00 0.00 2.24
738 739 7.069578 CCACAATGGGTAGTAGTATAGACAAGT 59.930 40.741 0.00 0.00 32.67 3.16
739 740 7.434492 CCACAATGGGTAGTAGTATAGACAAG 58.566 42.308 0.00 0.00 32.67 3.16
740 741 6.183360 GCCACAATGGGTAGTAGTATAGACAA 60.183 42.308 0.00 0.00 38.19 3.18
741 742 5.303589 GCCACAATGGGTAGTAGTATAGACA 59.696 44.000 0.00 0.00 38.19 3.41
742 743 5.780984 GCCACAATGGGTAGTAGTATAGAC 58.219 45.833 0.00 0.00 38.19 2.59
755 756 2.636830 CTTCAGACTAGCCACAATGGG 58.363 52.381 0.00 0.00 38.19 4.00
756 757 2.237143 TCCTTCAGACTAGCCACAATGG 59.763 50.000 0.00 0.00 41.55 3.16
757 758 3.616956 TCCTTCAGACTAGCCACAATG 57.383 47.619 0.00 0.00 0.00 2.82
758 759 4.640771 TTTCCTTCAGACTAGCCACAAT 57.359 40.909 0.00 0.00 0.00 2.71
759 760 4.431416 TTTTCCTTCAGACTAGCCACAA 57.569 40.909 0.00 0.00 0.00 3.33
760 761 4.640771 ATTTTCCTTCAGACTAGCCACA 57.359 40.909 0.00 0.00 0.00 4.17
761 762 4.156739 CCAATTTTCCTTCAGACTAGCCAC 59.843 45.833 0.00 0.00 0.00 5.01
762 763 4.042809 TCCAATTTTCCTTCAGACTAGCCA 59.957 41.667 0.00 0.00 0.00 4.75
763 764 4.589908 TCCAATTTTCCTTCAGACTAGCC 58.410 43.478 0.00 0.00 0.00 3.93
764 765 6.457528 CGAATCCAATTTTCCTTCAGACTAGC 60.458 42.308 0.00 0.00 0.00 3.42
765 766 6.457528 GCGAATCCAATTTTCCTTCAGACTAG 60.458 42.308 0.00 0.00 0.00 2.57
766 767 5.354234 GCGAATCCAATTTTCCTTCAGACTA 59.646 40.000 0.00 0.00 0.00 2.59
767 768 4.156739 GCGAATCCAATTTTCCTTCAGACT 59.843 41.667 0.00 0.00 0.00 3.24
768 769 4.156739 AGCGAATCCAATTTTCCTTCAGAC 59.843 41.667 0.00 0.00 0.00 3.51
769 770 4.335416 AGCGAATCCAATTTTCCTTCAGA 58.665 39.130 0.00 0.00 0.00 3.27
770 771 4.708726 AGCGAATCCAATTTTCCTTCAG 57.291 40.909 0.00 0.00 0.00 3.02
789 790 2.032290 GGAACTGTAAACACACGGAAGC 60.032 50.000 0.00 0.00 0.00 3.86
843 847 1.731093 CGTTTGCGGTTGTCCCTTT 59.269 52.632 0.00 0.00 0.00 3.11
912 916 1.218196 AGGAGGGCCTCGAGATTAAGA 59.782 52.381 26.54 0.00 42.19 2.10
919 923 4.342665 GGATTTATATAGGAGGGCCTCGAG 59.657 50.000 26.54 5.13 45.54 4.04
950 959 7.564660 GGAGATGATCAATAGAGAGGATGGTAT 59.435 40.741 0.00 0.00 0.00 2.73
952 961 5.721000 GGAGATGATCAATAGAGAGGATGGT 59.279 44.000 0.00 0.00 0.00 3.55
984 1000 1.825191 CATGGCTGATGGTTCCCGG 60.825 63.158 0.00 0.00 0.00 5.73
985 1001 1.077501 ACATGGCTGATGGTTCCCG 60.078 57.895 0.00 0.00 36.23 5.14
987 1003 2.019984 GAAGACATGGCTGATGGTTCC 58.980 52.381 0.00 0.00 36.23 3.62
988 1004 2.019984 GGAAGACATGGCTGATGGTTC 58.980 52.381 0.00 0.00 36.23 3.62
989 1005 1.355381 TGGAAGACATGGCTGATGGTT 59.645 47.619 0.00 0.00 36.23 3.67
990 1006 0.994247 TGGAAGACATGGCTGATGGT 59.006 50.000 0.00 0.00 36.23 3.55
1010 1030 1.396301 GCTTCAGCGAGATCTTGTTGG 59.604 52.381 22.50 11.44 0.00 3.77
1131 1151 3.267860 GCGGAGATGAGCTTGGCG 61.268 66.667 0.00 0.00 0.00 5.69
1133 1153 2.587194 CGGCGGAGATGAGCTTGG 60.587 66.667 0.00 0.00 0.00 3.61
1195 1215 2.962253 GTAGCAGCCGCCGATGTC 60.962 66.667 0.00 0.00 39.83 3.06
1217 1237 3.646715 CCTTGTCCTTGCCGGGGA 61.647 66.667 2.18 0.00 0.00 4.81
1222 1242 3.056328 GTCGGCCTTGTCCTTGCC 61.056 66.667 0.00 0.00 41.85 4.52
1223 1243 3.056328 GGTCGGCCTTGTCCTTGC 61.056 66.667 0.00 0.00 0.00 4.01
1239 1259 3.655211 ACCTTGGGCTGGAGCAGG 61.655 66.667 0.20 1.62 44.36 4.85
1308 1328 0.988145 CCTCATCCTGGCCCTTACCA 60.988 60.000 0.00 0.00 38.29 3.25
1311 1331 1.048724 CGTCCTCATCCTGGCCCTTA 61.049 60.000 0.00 0.00 0.00 2.69
1312 1332 2.370445 CGTCCTCATCCTGGCCCTT 61.370 63.158 0.00 0.00 0.00 3.95
1313 1333 2.765807 CGTCCTCATCCTGGCCCT 60.766 66.667 0.00 0.00 0.00 5.19
1315 1335 4.554036 GGCGTCCTCATCCTGGCC 62.554 72.222 0.00 0.00 0.00 5.36
1316 1336 4.899239 CGGCGTCCTCATCCTGGC 62.899 72.222 0.00 0.00 0.00 4.85
1317 1337 4.899239 GCGGCGTCCTCATCCTGG 62.899 72.222 9.37 0.00 0.00 4.45
1362 1382 3.833645 TAGCCGGCGCAGGTGTAG 61.834 66.667 27.43 2.21 37.52 2.74
1434 1454 2.125106 GTCACCTCGGTGGCCATC 60.125 66.667 9.72 7.61 44.18 3.51
1449 1469 2.740714 GGATGGCAGCACGAACGTC 61.741 63.158 4.64 0.00 0.00 4.34
1512 1535 4.371417 TACCCGCCACCCTCGTCT 62.371 66.667 0.00 0.00 0.00 4.18
1519 1542 2.433664 CTTCACGTACCCGCCACC 60.434 66.667 0.00 0.00 37.70 4.61
1520 1543 2.433664 CCTTCACGTACCCGCCAC 60.434 66.667 0.00 0.00 37.70 5.01
1521 1544 3.697747 CCCTTCACGTACCCGCCA 61.698 66.667 0.00 0.00 37.70 5.69
1545 1568 0.795735 CGTCCGTCACCATGTACGTC 60.796 60.000 0.00 4.35 37.40 4.34
1548 1571 1.153706 CCCGTCCGTCACCATGTAC 60.154 63.158 0.00 0.00 0.00 2.90
1853 1891 0.896226 AAGCTTAGACCAGGACCGAC 59.104 55.000 0.00 0.00 0.00 4.79
1857 1895 2.079925 CAAGCAAGCTTAGACCAGGAC 58.920 52.381 7.03 0.00 34.50 3.85
1865 1903 2.771089 TGGAGACACAAGCAAGCTTAG 58.229 47.619 7.03 5.99 32.32 2.18
1881 1919 7.502120 AATGAACGGATCAATTAGATTGGAG 57.498 36.000 0.00 0.00 42.54 3.86
1887 1925 6.486657 GGATGGAAATGAACGGATCAATTAGA 59.513 38.462 0.00 0.00 42.54 2.10
1893 1931 2.169561 TCGGATGGAAATGAACGGATCA 59.830 45.455 0.00 0.00 43.67 2.92
1933 1971 4.404715 AGGCAGTAAATCGGTAGCTTAAGA 59.595 41.667 6.67 0.00 0.00 2.10
1934 1972 4.694339 AGGCAGTAAATCGGTAGCTTAAG 58.306 43.478 0.00 0.00 0.00 1.85
1936 1974 4.748277 AAGGCAGTAAATCGGTAGCTTA 57.252 40.909 0.00 0.00 0.00 3.09
1937 1975 3.629142 AAGGCAGTAAATCGGTAGCTT 57.371 42.857 0.00 0.00 0.00 3.74
1939 1977 3.673809 CGATAAGGCAGTAAATCGGTAGC 59.326 47.826 0.00 0.00 38.01 3.58
1992 2030 2.084546 GTCCCGGATTCTTTTCCACTG 58.915 52.381 0.73 0.00 35.34 3.66
2009 2047 0.995731 GTCACAACGTCGACTCGTCC 60.996 60.000 14.70 0.00 43.38 4.79
2025 2063 2.882137 GGAAAGGTTGATGTTTCCGTCA 59.118 45.455 0.00 0.00 41.72 4.35
2035 2073 3.222603 GTTGGACTGTGGAAAGGTTGAT 58.777 45.455 0.00 0.00 0.00 2.57
2037 2075 1.333619 CGTTGGACTGTGGAAAGGTTG 59.666 52.381 0.00 0.00 0.00 3.77
2039 2077 0.179029 CCGTTGGACTGTGGAAAGGT 60.179 55.000 0.00 0.00 0.00 3.50
2041 2079 1.512926 CTCCGTTGGACTGTGGAAAG 58.487 55.000 0.00 0.00 0.00 2.62
2044 2082 0.761323 TTCCTCCGTTGGACTGTGGA 60.761 55.000 0.00 0.00 35.58 4.02
2045 2083 0.602905 GTTCCTCCGTTGGACTGTGG 60.603 60.000 0.00 0.00 35.58 4.17
2046 2084 0.105964 TGTTCCTCCGTTGGACTGTG 59.894 55.000 0.00 0.00 35.58 3.66
2047 2085 0.106149 GTGTTCCTCCGTTGGACTGT 59.894 55.000 0.00 0.00 35.58 3.55
2048 2086 0.105964 TGTGTTCCTCCGTTGGACTG 59.894 55.000 0.00 0.00 35.58 3.51
2049 2087 0.106149 GTGTGTTCCTCCGTTGGACT 59.894 55.000 0.00 0.00 35.58 3.85
2050 2088 0.106149 AGTGTGTTCCTCCGTTGGAC 59.894 55.000 0.00 0.00 35.58 4.02
2051 2089 1.616865 CTAGTGTGTTCCTCCGTTGGA 59.383 52.381 0.00 0.00 0.00 3.53
2052 2090 1.939838 GCTAGTGTGTTCCTCCGTTGG 60.940 57.143 0.00 0.00 0.00 3.77
2053 2091 1.000955 AGCTAGTGTGTTCCTCCGTTG 59.999 52.381 0.00 0.00 0.00 4.10
2054 2092 1.339097 AGCTAGTGTGTTCCTCCGTT 58.661 50.000 0.00 0.00 0.00 4.44
2055 2093 2.211250 TAGCTAGTGTGTTCCTCCGT 57.789 50.000 0.00 0.00 0.00 4.69
2056 2094 3.448686 CATTAGCTAGTGTGTTCCTCCG 58.551 50.000 8.04 0.00 0.00 4.63
2057 2095 3.198872 GCATTAGCTAGTGTGTTCCTCC 58.801 50.000 16.62 0.00 37.91 4.30
2071 2109 5.095490 ACGCAAGAACAAAATAGCATTAGC 58.905 37.500 0.00 0.00 43.62 3.09
2072 2110 7.240674 TGTACGCAAGAACAAAATAGCATTAG 58.759 34.615 0.00 0.00 43.62 1.73
2073 2111 7.135089 TGTACGCAAGAACAAAATAGCATTA 57.865 32.000 0.00 0.00 43.62 1.90
2074 2112 6.007936 TGTACGCAAGAACAAAATAGCATT 57.992 33.333 0.00 0.00 43.62 3.56
2075 2113 5.621197 TGTACGCAAGAACAAAATAGCAT 57.379 34.783 0.00 0.00 43.62 3.79
2076 2114 5.425577 TTGTACGCAAGAACAAAATAGCA 57.574 34.783 0.00 0.00 43.62 3.49
2089 2127 2.420372 TGCACAAAACTCTTGTACGCAA 59.580 40.909 1.47 0.00 31.33 4.85
2090 2128 2.010497 TGCACAAAACTCTTGTACGCA 58.990 42.857 0.00 0.13 31.65 5.24
2091 2129 2.223157 TGTGCACAAAACTCTTGTACGC 60.223 45.455 19.28 0.00 0.00 4.42
2092 2130 3.666883 TGTGCACAAAACTCTTGTACG 57.333 42.857 19.28 0.00 0.00 3.67
2131 2169 9.642327 ACGCCGTATGTACATTTTATTATATCA 57.358 29.630 14.77 0.00 0.00 2.15
2132 2170 9.895894 CACGCCGTATGTACATTTTATTATATC 57.104 33.333 14.77 0.00 0.00 1.63
2133 2171 9.426837 ACACGCCGTATGTACATTTTATTATAT 57.573 29.630 14.77 0.00 0.00 0.86
2134 2172 8.815141 ACACGCCGTATGTACATTTTATTATA 57.185 30.769 14.77 0.00 0.00 0.98
2135 2173 7.718272 ACACGCCGTATGTACATTTTATTAT 57.282 32.000 14.77 0.00 0.00 1.28
2146 2184 1.818060 AGGTTGTACACGCCGTATGTA 59.182 47.619 0.00 0.00 31.20 2.29
2147 2185 0.604578 AGGTTGTACACGCCGTATGT 59.395 50.000 0.00 0.00 31.20 2.29
2155 2193 7.464178 GCATATTCTTGAGTTAGGTTGTACACG 60.464 40.741 0.00 0.00 0.00 4.49
2159 2197 8.100791 ACTTGCATATTCTTGAGTTAGGTTGTA 58.899 33.333 0.00 0.00 0.00 2.41
2178 2216 5.708230 TGTAAAGGAAATTACCGACTTGCAT 59.292 36.000 0.00 0.00 35.38 3.96
2186 2224 7.299586 TGAACGAAATGTAAAGGAAATTACCG 58.700 34.615 0.00 0.00 35.38 4.02
2210 2248 7.378181 ACAATAGGGAGTTAAAAATGCAACTG 58.622 34.615 0.00 0.00 35.17 3.16
2211 2249 7.539034 ACAATAGGGAGTTAAAAATGCAACT 57.461 32.000 0.00 0.00 37.69 3.16
2213 2251 9.699703 GTAAACAATAGGGAGTTAAAAATGCAA 57.300 29.630 0.00 0.00 0.00 4.08
2264 2305 2.355108 GGAGCAGTAGGAAGATGCAACA 60.355 50.000 0.00 0.00 42.45 3.33
2267 2308 1.483827 CAGGAGCAGTAGGAAGATGCA 59.516 52.381 0.00 0.00 42.45 3.96
2296 2337 1.150308 TTGCCTGCTTGTGCCACTA 59.850 52.632 0.00 0.00 38.71 2.74
2306 2355 1.377725 CTTGATCGGGTTGCCTGCT 60.378 57.895 0.00 0.00 0.00 4.24
2339 2396 5.357257 ACGACAAAGACACACAAATAGACT 58.643 37.500 0.00 0.00 0.00 3.24
2345 2402 2.701107 TGGACGACAAAGACACACAAA 58.299 42.857 0.00 0.00 0.00 2.83
2346 2403 2.388310 TGGACGACAAAGACACACAA 57.612 45.000 0.00 0.00 0.00 3.33
2347 2404 2.613026 ATGGACGACAAAGACACACA 57.387 45.000 0.00 0.00 0.00 3.72
2349 2406 3.435327 GCAATATGGACGACAAAGACACA 59.565 43.478 0.00 0.00 0.00 3.72
2351 2408 3.006940 GGCAATATGGACGACAAAGACA 58.993 45.455 0.00 0.00 0.00 3.41
2360 2417 0.861837 GCTCTTCGGCAATATGGACG 59.138 55.000 0.00 0.00 41.81 4.79
2380 2437 1.141657 TGGCACCAGGAAGATAGCATC 59.858 52.381 0.00 0.00 0.00 3.91
2382 2439 0.253044 GTGGCACCAGGAAGATAGCA 59.747 55.000 6.29 0.00 0.00 3.49
2403 2460 6.709018 ACTAAACTAACAAAACATGCTGGT 57.291 33.333 0.00 0.00 0.00 4.00
2415 2472 7.786046 TGGAGGTGAGATAACTAAACTAACA 57.214 36.000 0.00 0.00 0.00 2.41
2416 2473 9.315525 GATTGGAGGTGAGATAACTAAACTAAC 57.684 37.037 0.00 0.00 0.00 2.34
2418 2475 8.840200 AGATTGGAGGTGAGATAACTAAACTA 57.160 34.615 0.00 0.00 0.00 2.24
2419 2476 7.741554 AGATTGGAGGTGAGATAACTAAACT 57.258 36.000 0.00 0.00 0.00 2.66
2422 2479 9.434275 TGATTAGATTGGAGGTGAGATAACTAA 57.566 33.333 0.00 0.00 0.00 2.24
2423 2480 9.083422 CTGATTAGATTGGAGGTGAGATAACTA 57.917 37.037 0.00 0.00 0.00 2.24
2428 2485 7.015098 CACTACTGATTAGATTGGAGGTGAGAT 59.985 40.741 0.00 0.00 0.00 2.75
2430 2487 6.462207 CCACTACTGATTAGATTGGAGGTGAG 60.462 46.154 0.00 0.00 0.00 3.51
2482 2539 4.709397 TCTCCACTTTGGTTGAATGTTTGT 59.291 37.500 0.00 0.00 39.03 2.83
2486 2543 4.728772 TGATCTCCACTTTGGTTGAATGT 58.271 39.130 0.00 0.00 39.03 2.71
2503 2560 7.652524 ACTATGCGAGTGGATATATTGATCT 57.347 36.000 0.00 0.00 36.87 2.75
2520 2577 7.186128 TGCAACTCATAATAACAAACTATGCG 58.814 34.615 0.00 0.00 0.00 4.73
2529 2586 4.333649 GCTCTGCTGCAACTCATAATAACA 59.666 41.667 3.02 0.00 0.00 2.41
2548 2605 3.997021 CACACCTTGTTAAATCGAGCTCT 59.003 43.478 12.85 0.00 0.00 4.09
2573 2630 7.105588 GGGACCAGCAAAATTCATAGATTTTT 58.894 34.615 0.00 0.00 37.17 1.94
2574 2631 6.213195 TGGGACCAGCAAAATTCATAGATTTT 59.787 34.615 0.00 0.00 39.21 1.82
2610 2667 9.280174 TCGACACTTTAGGAAAGACAAATAAAT 57.720 29.630 5.98 0.00 41.02 1.40
2629 2686 7.826690 ACAAAAATTTATAGCCAATCGACACT 58.173 30.769 0.00 0.00 0.00 3.55
2706 2763 0.038618 CACGACAATCACTCCACCGA 60.039 55.000 0.00 0.00 0.00 4.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.