Multiple sequence alignment - TraesCS1D01G036400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G036400 chr1D 100.000 2915 0 0 1 2915 16979338 16976424 0.000000e+00 5384
1 TraesCS1D01G036400 chr1D 87.390 1253 109 23 673 1891 16894317 16895554 0.000000e+00 1393
2 TraesCS1D01G036400 chr1D 84.984 919 129 4 976 1891 17021456 17020544 0.000000e+00 924
3 TraesCS1D01G036400 chr1D 83.819 927 118 13 976 1892 17052130 17051226 0.000000e+00 852
4 TraesCS1D01G036400 chr1D 80.368 1034 156 22 876 1891 17048380 17047376 0.000000e+00 741
5 TraesCS1D01G036400 chr1D 83.634 776 112 11 1141 1909 17061854 17061087 0.000000e+00 715
6 TraesCS1D01G036400 chr1D 82.133 347 30 11 1905 2249 16895537 16895853 4.790000e-68 268
7 TraesCS1D01G036400 chr1B 90.436 1903 123 25 1 1891 30843391 30845246 0.000000e+00 2451
8 TraesCS1D01G036400 chr1B 88.218 348 29 7 1905 2249 30845229 30845567 3.500000e-109 405
9 TraesCS1D01G036400 chr1B 87.352 253 21 5 2251 2503 24772867 24772626 2.210000e-71 279
10 TraesCS1D01G036400 chr1B 87.234 141 16 1 2738 2876 57641508 57641648 3.010000e-35 159
11 TraesCS1D01G036400 chr1A 82.500 1040 146 23 876 1891 18321204 18320177 0.000000e+00 880
12 TraesCS1D01G036400 chr1A 88.205 585 63 4 1307 1891 18082314 18082892 0.000000e+00 693
13 TraesCS1D01G036400 chr1A 80.065 918 133 31 876 1780 18298984 18299864 1.140000e-178 636
14 TraesCS1D01G036400 chr1A 83.768 345 36 9 1905 2247 18082875 18083201 2.820000e-80 309
15 TraesCS1D01G036400 chr1A 83.239 352 37 11 1899 2247 18100315 18100647 1.310000e-78 303
16 TraesCS1D01G036400 chr1A 94.958 119 6 0 1773 1891 18300733 18300851 1.380000e-43 187
17 TraesCS1D01G036400 chr2A 86.266 233 23 5 2336 2561 733433864 733433634 8.070000e-61 244
18 TraesCS1D01G036400 chr2D 84.874 238 26 5 2337 2566 493192787 493193022 6.280000e-57 231
19 TraesCS1D01G036400 chr6A 83.193 238 30 5 2337 2566 68896222 68895987 2.940000e-50 209
20 TraesCS1D01G036400 chr2B 89.172 157 14 3 2411 2566 581582383 581582537 2.960000e-45 193
21 TraesCS1D01G036400 chr4A 83.415 205 28 5 2607 2806 589591133 589590930 4.960000e-43 185
22 TraesCS1D01G036400 chr4B 79.004 281 47 9 2607 2876 23462667 23462946 6.420000e-42 182
23 TraesCS1D01G036400 chr4D 78.986 276 46 9 2612 2876 12771320 12771594 8.300000e-41 178
24 TraesCS1D01G036400 chr6D 82.857 140 17 6 245 377 405573924 405573785 5.100000e-23 119


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G036400 chr1D 16976424 16979338 2914 True 5384.0 5384 100.0000 1 2915 1 chr1D.!!$R1 2914
1 TraesCS1D01G036400 chr1D 17020544 17021456 912 True 924.0 924 84.9840 976 1891 1 chr1D.!!$R2 915
2 TraesCS1D01G036400 chr1D 16894317 16895853 1536 False 830.5 1393 84.7615 673 2249 2 chr1D.!!$F1 1576
3 TraesCS1D01G036400 chr1D 17047376 17052130 4754 True 796.5 852 82.0935 876 1892 2 chr1D.!!$R4 1016
4 TraesCS1D01G036400 chr1D 17061087 17061854 767 True 715.0 715 83.6340 1141 1909 1 chr1D.!!$R3 768
5 TraesCS1D01G036400 chr1B 30843391 30845567 2176 False 1428.0 2451 89.3270 1 2249 2 chr1B.!!$F2 2248
6 TraesCS1D01G036400 chr1A 18320177 18321204 1027 True 880.0 880 82.5000 876 1891 1 chr1A.!!$R1 1015
7 TraesCS1D01G036400 chr1A 18082314 18083201 887 False 501.0 693 85.9865 1307 2247 2 chr1A.!!$F2 940
8 TraesCS1D01G036400 chr1A 18298984 18300851 1867 False 411.5 636 87.5115 876 1891 2 chr1A.!!$F3 1015

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
132 133 0.036306 GAAGGGGTGGTGAACGACAT 59.964 55.0 0.00 0.0 0.00 3.06 F
1011 1095 0.103026 CGACTCCGATGGATTCTGCA 59.897 55.0 2.33 0.0 38.22 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1603 1715 1.019673 AGCGTGATGGATGACATTGC 58.980 50.0 0.0 0.0 40.72 3.56 R
2737 4844 0.034863 GCAGGTTATTTGGACCCCGA 60.035 55.0 0.0 0.0 37.93 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 2.106857 ACGAACCCAACCATACTGGAAA 59.893 45.455 0.00 0.00 40.96 3.13
45 46 4.037923 CCCAACCATACTGGAAACATATGC 59.962 45.833 1.58 0.00 40.96 3.14
51 52 2.794103 ACTGGAAACATATGCAGCACA 58.206 42.857 0.00 0.00 41.95 4.57
86 87 3.827008 TGGCTGGTGATCTTGATCTAC 57.173 47.619 11.31 7.94 0.00 2.59
96 97 7.099764 GGTGATCTTGATCTACAAAGACTTCA 58.900 38.462 11.31 0.00 38.08 3.02
108 109 4.022589 ACAAAGACTTCACATTGCATCAGG 60.023 41.667 0.00 0.00 0.00 3.86
111 112 4.910195 AGACTTCACATTGCATCAGGTTA 58.090 39.130 0.00 0.00 0.00 2.85
127 128 2.041216 AGGTTATGAAGGGGTGGTGAAC 59.959 50.000 0.00 0.00 0.00 3.18
132 133 0.036306 GAAGGGGTGGTGAACGACAT 59.964 55.000 0.00 0.00 0.00 3.06
151 152 0.609131 TAAAGCAAGGCTCTGGTGGC 60.609 55.000 0.00 0.00 38.25 5.01
162 163 0.545071 TCTGGTGGCAGACATGGAGA 60.545 55.000 0.00 0.00 0.00 3.71
198 199 7.141758 AGATCATTGATAGAAAGGGTGCTTA 57.858 36.000 0.00 0.00 0.00 3.09
208 209 6.067217 AGAAAGGGTGCTTATAGTTCATGT 57.933 37.500 0.00 0.00 0.00 3.21
267 268 5.181009 AGCTCATCATCTCGTCAAATTTGA 58.819 37.500 16.91 16.91 34.20 2.69
303 304 1.272203 TGGGCGTCATATTTGGTTGGT 60.272 47.619 0.00 0.00 0.00 3.67
328 330 2.560981 CCCCATGACCAAAACCTTGTAC 59.439 50.000 0.00 0.00 0.00 2.90
329 331 2.560981 CCCATGACCAAAACCTTGTACC 59.439 50.000 0.00 0.00 0.00 3.34
346 348 6.404184 CCTTGTACCGATGAACATTATTGCAA 60.404 38.462 0.00 0.00 0.00 4.08
409 412 2.164422 AGCGCATAGGCTTTTCCTTTTC 59.836 45.455 11.47 0.00 44.75 2.29
428 433 3.863606 TTTTTGGGAGGGGTTGCG 58.136 55.556 0.00 0.00 0.00 4.85
438 443 2.338620 GGGTTGCGTGGGCTTTTC 59.661 61.111 0.00 0.00 40.82 2.29
449 455 3.421844 GTGGGCTTTTCCTACTTGACAT 58.578 45.455 0.00 0.00 42.51 3.06
456 462 5.163884 GCTTTTCCTACTTGACATCCGTTAC 60.164 44.000 0.00 0.00 0.00 2.50
457 463 3.770263 TCCTACTTGACATCCGTTACG 57.230 47.619 0.00 0.00 0.00 3.18
460 466 4.022068 TCCTACTTGACATCCGTTACGTTT 60.022 41.667 3.52 0.00 0.00 3.60
461 467 4.687483 CCTACTTGACATCCGTTACGTTTT 59.313 41.667 3.52 0.00 0.00 2.43
462 468 5.863397 CCTACTTGACATCCGTTACGTTTTA 59.137 40.000 3.52 0.00 0.00 1.52
465 471 7.014092 ACTTGACATCCGTTACGTTTTAAAA 57.986 32.000 3.52 0.00 0.00 1.52
489 495 2.093106 AGTTCAGTCTACGCCTACAGG 58.907 52.381 0.00 0.00 38.53 4.00
499 505 2.438434 CCTACAGGCCCCGCAAAG 60.438 66.667 0.00 0.00 0.00 2.77
503 509 0.178987 TACAGGCCCCGCAAAGAAAA 60.179 50.000 0.00 0.00 0.00 2.29
504 510 1.045911 ACAGGCCCCGCAAAGAAAAA 61.046 50.000 0.00 0.00 0.00 1.94
534 540 0.387622 TACACCTACAGCGACGCAAC 60.388 55.000 23.70 0.00 0.00 4.17
541 547 4.704833 AGCGACGCAACATGGGCT 62.705 61.111 23.70 0.00 33.10 5.19
542 548 2.817834 GCGACGCAACATGGGCTA 60.818 61.111 16.42 0.00 33.10 3.93
543 549 2.395360 GCGACGCAACATGGGCTAA 61.395 57.895 16.42 0.00 33.10 3.09
577 592 1.298667 GGCCGGCCAAAAGAGTCTA 59.701 57.895 40.73 0.00 35.81 2.59
627 642 6.801862 CCCAGAAAAATCTTAACGACAATCAC 59.198 38.462 0.00 0.00 0.00 3.06
634 649 7.925703 AATCTTAACGACAATCACCGTATAG 57.074 36.000 0.00 0.00 38.13 1.31
635 650 5.276270 TCTTAACGACAATCACCGTATAGC 58.724 41.667 0.00 0.00 38.13 2.97
683 702 3.055094 AGCAATACGTTGGAGGTCAAGAT 60.055 43.478 0.00 0.00 35.80 2.40
744 780 3.469863 GACCAGGCGACCCAACACA 62.470 63.158 0.00 0.00 0.00 3.72
748 784 3.656045 GGCGACCCAACACAACCG 61.656 66.667 0.00 0.00 0.00 4.44
749 785 2.589442 GCGACCCAACACAACCGA 60.589 61.111 0.00 0.00 0.00 4.69
750 786 1.964373 GCGACCCAACACAACCGAT 60.964 57.895 0.00 0.00 0.00 4.18
751 787 1.908066 GCGACCCAACACAACCGATC 61.908 60.000 0.00 0.00 0.00 3.69
752 788 1.623081 CGACCCAACACAACCGATCG 61.623 60.000 8.51 8.51 0.00 3.69
753 789 0.601841 GACCCAACACAACCGATCGT 60.602 55.000 15.09 0.00 0.00 3.73
754 790 0.882927 ACCCAACACAACCGATCGTG 60.883 55.000 15.09 9.30 39.10 4.35
755 791 1.573829 CCCAACACAACCGATCGTGG 61.574 60.000 15.09 12.61 37.45 4.94
756 792 1.206578 CAACACAACCGATCGTGGC 59.793 57.895 15.09 0.00 37.45 5.01
757 793 2.314647 AACACAACCGATCGTGGCG 61.315 57.895 15.09 5.27 37.45 5.69
803 860 2.830370 GCCTTGGATGGCCGGAAG 60.830 66.667 5.05 0.00 46.82 3.46
810 867 4.496336 ATGGCCGGAAGAGCAGCC 62.496 66.667 5.05 0.00 45.96 4.85
812 869 4.847444 GGCCGGAAGAGCAGCCTC 62.847 72.222 5.05 0.00 42.34 4.70
813 870 4.087892 GCCGGAAGAGCAGCCTCA 62.088 66.667 5.05 0.00 40.68 3.86
814 871 2.125350 CCGGAAGAGCAGCCTCAC 60.125 66.667 0.00 0.00 40.68 3.51
815 872 2.654079 CCGGAAGAGCAGCCTCACT 61.654 63.158 0.00 0.00 40.68 3.41
896 977 4.675114 CGTTTCTTTGGATCTTTCGGTTTG 59.325 41.667 0.00 0.00 0.00 2.93
897 978 5.504994 CGTTTCTTTGGATCTTTCGGTTTGA 60.505 40.000 0.00 0.00 0.00 2.69
898 979 5.689383 TTCTTTGGATCTTTCGGTTTGAG 57.311 39.130 0.00 0.00 0.00 3.02
899 980 4.968259 TCTTTGGATCTTTCGGTTTGAGA 58.032 39.130 0.00 0.00 0.00 3.27
901 982 5.238650 TCTTTGGATCTTTCGGTTTGAGAAC 59.761 40.000 0.00 0.00 34.96 3.01
902 983 4.351874 TGGATCTTTCGGTTTGAGAACT 57.648 40.909 0.00 0.00 36.03 3.01
905 986 7.177832 TGGATCTTTCGGTTTGAGAACTATA 57.822 36.000 0.00 0.00 36.03 1.31
1011 1095 0.103026 CGACTCCGATGGATTCTGCA 59.897 55.000 2.33 0.00 38.22 4.41
1049 1133 0.985549 GACTACGAGCAAGTCAAGCG 59.014 55.000 0.00 0.00 42.43 4.68
1082 1166 0.527385 GATGTCGTCTGCTCTGAGGC 60.527 60.000 6.83 0.00 0.00 4.70
1241 1340 1.740380 CGACGCCTTCTTGATGGACAT 60.740 52.381 6.72 0.00 0.00 3.06
1276 1375 1.716581 CAGAAGCACGAAAGACGACTC 59.283 52.381 0.00 0.00 45.77 3.36
1291 1390 3.744987 ACGACTCGACTTCATAAGTTCG 58.255 45.455 5.20 9.05 43.03 3.95
1603 1715 2.825836 GGTCCATGGCCGAAGCTG 60.826 66.667 6.96 0.00 39.73 4.24
1641 1753 0.469494 TGCATGATATCACACCCGCT 59.531 50.000 7.78 0.00 0.00 5.52
1707 1831 5.194334 TCCTACTACTACACAGGATAACCCA 59.806 44.000 0.00 0.00 37.41 4.51
1729 1853 6.405731 CCCATCCAATGACGTATTGTTTGATT 60.406 38.462 13.21 0.00 43.78 2.57
1730 1854 7.035004 CCATCCAATGACGTATTGTTTGATTT 58.965 34.615 13.21 0.00 43.78 2.17
1731 1855 8.187480 CCATCCAATGACGTATTGTTTGATTTA 58.813 33.333 13.21 0.00 43.78 1.40
1860 2860 2.368439 GCTGAGATGTACAATTGCCCA 58.632 47.619 5.05 2.52 0.00 5.36
1892 2892 7.944729 AGGACAAGTGCATTGACTTTATTAT 57.055 32.000 13.53 0.00 41.83 1.28
1893 2893 7.765307 AGGACAAGTGCATTGACTTTATTATG 58.235 34.615 13.53 0.00 41.83 1.90
1894 2894 6.473455 GGACAAGTGCATTGACTTTATTATGC 59.527 38.462 13.53 0.00 41.83 3.14
1895 2895 6.029607 ACAAGTGCATTGACTTTATTATGCG 58.970 36.000 13.53 0.00 44.77 4.73
1896 2896 4.936396 GTGCATTGACTTTATTATGCGC 57.064 40.909 0.00 0.00 44.77 6.09
1897 2897 4.629251 TGCATTGACTTTATTATGCGCA 57.371 36.364 14.96 14.96 44.77 6.09
1898 2898 4.991472 TGCATTGACTTTATTATGCGCAA 58.009 34.783 17.11 0.00 44.77 4.85
1899 2899 5.405797 TGCATTGACTTTATTATGCGCAAA 58.594 33.333 17.11 10.98 44.77 3.68
1900 2900 5.866092 TGCATTGACTTTATTATGCGCAAAA 59.134 32.000 17.11 9.74 44.77 2.44
1901 2901 6.367149 TGCATTGACTTTATTATGCGCAAAAA 59.633 30.769 17.11 13.09 44.77 1.94
1968 2991 0.749649 CTGGAGGAGTCTTCATCGGG 59.250 60.000 4.48 0.00 35.01 5.14
2002 3025 8.806146 GGGCACAAACTTCATGGATTATTATAT 58.194 33.333 0.00 0.00 0.00 0.86
2035 3064 7.040271 GGTGAGTTTAGACTTTAGAGAGAGTGT 60.040 40.741 0.00 0.00 35.88 3.55
2179 3244 5.067283 TCAGTGTTTTTCTTAGAAAGGGTGC 59.933 40.000 7.49 0.21 0.00 5.01
2204 3275 3.251487 CGACGGGGATTTACTGTGTTTTT 59.749 43.478 0.00 0.00 0.00 1.94
2254 3325 9.802039 ATATGGTTTTTAGTTTGTTAGTCCTGA 57.198 29.630 0.00 0.00 0.00 3.86
2255 3326 7.562454 TGGTTTTTAGTTTGTTAGTCCTGAG 57.438 36.000 0.00 0.00 0.00 3.35
2257 3328 5.917541 TTTTAGTTTGTTAGTCCTGAGCG 57.082 39.130 0.00 0.00 0.00 5.03
2259 3330 3.470645 AGTTTGTTAGTCCTGAGCGTT 57.529 42.857 0.00 0.00 0.00 4.84
2261 3332 3.128349 GTTTGTTAGTCCTGAGCGTTCA 58.872 45.455 0.88 0.88 0.00 3.18
2262 3333 3.678056 TTGTTAGTCCTGAGCGTTCAT 57.322 42.857 1.26 0.00 31.68 2.57
2263 3334 2.959516 TGTTAGTCCTGAGCGTTCATG 58.040 47.619 1.26 0.00 31.68 3.07
2264 3335 2.299013 TGTTAGTCCTGAGCGTTCATGT 59.701 45.455 1.26 0.00 31.68 3.21
2265 3336 2.654749 TAGTCCTGAGCGTTCATGTG 57.345 50.000 1.26 0.00 31.68 3.21
2266 3337 0.671781 AGTCCTGAGCGTTCATGTGC 60.672 55.000 1.26 0.00 31.68 4.57
2267 3338 1.737735 TCCTGAGCGTTCATGTGCG 60.738 57.895 1.26 7.17 35.87 5.34
2273 3344 3.869187 CGTTCATGTGCGCACCTA 58.131 55.556 35.72 20.45 0.00 3.08
2274 3345 2.383170 CGTTCATGTGCGCACCTAT 58.617 52.632 35.72 21.83 0.00 2.57
2275 3346 0.301687 CGTTCATGTGCGCACCTATC 59.698 55.000 35.72 20.58 0.00 2.08
2278 3349 3.194861 GTTCATGTGCGCACCTATCTTA 58.805 45.455 35.72 17.31 0.00 2.10
2279 3350 2.821546 TCATGTGCGCACCTATCTTAC 58.178 47.619 35.72 10.06 0.00 2.34
2280 3351 2.430694 TCATGTGCGCACCTATCTTACT 59.569 45.455 35.72 7.81 0.00 2.24
2282 3353 4.098807 TCATGTGCGCACCTATCTTACTTA 59.901 41.667 35.72 14.44 0.00 2.24
2283 3354 4.665833 TGTGCGCACCTATCTTACTTAT 57.334 40.909 35.72 0.00 0.00 1.73
2284 3355 4.368315 TGTGCGCACCTATCTTACTTATG 58.632 43.478 35.72 0.00 0.00 1.90
2285 3356 3.184581 GTGCGCACCTATCTTACTTATGC 59.815 47.826 30.12 0.00 0.00 3.14
2286 3357 3.181470 TGCGCACCTATCTTACTTATGCA 60.181 43.478 5.66 0.00 0.00 3.96
2287 3358 3.184581 GCGCACCTATCTTACTTATGCAC 59.815 47.826 0.30 0.00 0.00 4.57
2289 3360 4.369182 GCACCTATCTTACTTATGCACGT 58.631 43.478 0.00 0.00 0.00 4.49
2290 3361 4.444720 GCACCTATCTTACTTATGCACGTC 59.555 45.833 0.00 0.00 0.00 4.34
2291 3362 4.982916 CACCTATCTTACTTATGCACGTCC 59.017 45.833 0.00 0.00 0.00 4.79
2292 3363 4.647853 ACCTATCTTACTTATGCACGTCCA 59.352 41.667 0.00 0.00 0.00 4.02
2293 3364 4.982916 CCTATCTTACTTATGCACGTCCAC 59.017 45.833 0.00 0.00 0.00 4.02
2294 3365 4.737855 ATCTTACTTATGCACGTCCACT 57.262 40.909 0.00 0.00 0.00 4.00
2295 3366 3.845178 TCTTACTTATGCACGTCCACTG 58.155 45.455 0.00 0.00 0.00 3.66
2296 3367 2.665649 TACTTATGCACGTCCACTGG 57.334 50.000 0.00 0.00 0.00 4.00
2298 3369 1.337823 ACTTATGCACGTCCACTGGTC 60.338 52.381 0.00 0.00 0.00 4.02
2299 3370 0.973632 TTATGCACGTCCACTGGTCT 59.026 50.000 0.00 0.00 0.00 3.85
2300 3371 1.842052 TATGCACGTCCACTGGTCTA 58.158 50.000 0.00 0.00 0.00 2.59
2301 3372 0.532573 ATGCACGTCCACTGGTCTAG 59.467 55.000 0.00 0.00 0.00 2.43
2302 3373 1.215647 GCACGTCCACTGGTCTAGG 59.784 63.158 0.00 0.00 0.00 3.02
2303 3374 1.248785 GCACGTCCACTGGTCTAGGA 61.249 60.000 0.00 0.00 0.00 2.94
2304 3375 1.475403 CACGTCCACTGGTCTAGGAT 58.525 55.000 0.00 0.00 33.33 3.24
2305 3376 1.135139 CACGTCCACTGGTCTAGGATG 59.865 57.143 0.00 0.00 42.75 3.51
2306 3377 1.005569 ACGTCCACTGGTCTAGGATGA 59.994 52.381 6.89 0.00 40.16 2.92
2307 3378 2.311463 CGTCCACTGGTCTAGGATGAT 58.689 52.381 0.00 0.00 40.16 2.45
2308 3379 2.294791 CGTCCACTGGTCTAGGATGATC 59.705 54.545 0.00 0.00 40.16 2.92
2309 3380 2.630580 GTCCACTGGTCTAGGATGATCC 59.369 54.545 2.46 2.46 36.58 3.36
2311 3382 3.051803 TCCACTGGTCTAGGATGATCCTT 60.052 47.826 20.67 3.99 46.91 3.36
2312 3383 3.070734 CCACTGGTCTAGGATGATCCTTG 59.929 52.174 20.67 17.80 46.91 3.61
2313 3384 3.963374 CACTGGTCTAGGATGATCCTTGA 59.037 47.826 20.67 19.95 46.91 3.02
2315 3386 4.592351 ACTGGTCTAGGATGATCCTTGATG 59.408 45.833 24.49 19.34 46.91 3.07
2316 3387 3.906218 TGGTCTAGGATGATCCTTGATGG 59.094 47.826 24.49 9.46 46.91 3.51
2318 3389 3.326006 GTCTAGGATGATCCTTGATGGCA 59.674 47.826 24.49 3.55 46.91 4.92
2319 3390 2.653234 AGGATGATCCTTGATGGCAC 57.347 50.000 8.51 0.00 46.91 5.01
2320 3391 2.133520 AGGATGATCCTTGATGGCACT 58.866 47.619 8.51 0.00 46.91 4.40
2321 3392 2.158652 AGGATGATCCTTGATGGCACTG 60.159 50.000 8.51 0.00 46.91 3.66
2322 3393 2.158711 GGATGATCCTTGATGGCACTGA 60.159 50.000 3.71 0.00 32.53 3.41
2323 3394 3.498121 GGATGATCCTTGATGGCACTGAT 60.498 47.826 3.71 0.00 32.53 2.90
2325 3396 2.240414 TGATCCTTGATGGCACTGATGT 59.760 45.455 0.00 0.00 35.26 3.06
2326 3397 3.455543 TGATCCTTGATGGCACTGATGTA 59.544 43.478 0.00 0.00 35.26 2.29
2327 3398 3.266510 TCCTTGATGGCACTGATGTAC 57.733 47.619 0.00 0.00 35.26 2.90
2332 3403 5.278907 CCTTGATGGCACTGATGTACAAAAA 60.279 40.000 0.00 0.00 0.00 1.94
2366 3437 5.904941 ACAAATGTCTTCTGCAACAATTGA 58.095 33.333 19.09 0.00 38.13 2.57
2367 3438 5.750067 ACAAATGTCTTCTGCAACAATTGAC 59.250 36.000 19.09 8.74 38.13 3.18
2368 3439 5.779529 AATGTCTTCTGCAACAATTGACT 57.220 34.783 13.59 0.00 0.00 3.41
2371 3442 6.882610 TGTCTTCTGCAACAATTGACTATT 57.117 33.333 13.59 0.00 0.00 1.73
2372 3443 6.902341 TGTCTTCTGCAACAATTGACTATTC 58.098 36.000 13.59 0.00 0.00 1.75
2374 3445 7.020010 GTCTTCTGCAACAATTGACTATTCAG 58.980 38.462 13.59 9.80 31.71 3.02
2375 3446 5.885230 TCTGCAACAATTGACTATTCAGG 57.115 39.130 13.59 0.00 31.71 3.86
2376 3447 5.559770 TCTGCAACAATTGACTATTCAGGA 58.440 37.500 13.59 0.00 31.71 3.86
2377 3448 6.182627 TCTGCAACAATTGACTATTCAGGAT 58.817 36.000 13.59 0.00 31.71 3.24
2378 3449 7.337938 TCTGCAACAATTGACTATTCAGGATA 58.662 34.615 13.59 0.00 31.71 2.59
2379 3450 7.828717 TCTGCAACAATTGACTATTCAGGATAA 59.171 33.333 13.59 0.00 31.71 1.75
2381 3452 8.623903 TGCAACAATTGACTATTCAGGATAATC 58.376 33.333 13.59 0.00 31.71 1.75
2382 3453 8.078596 GCAACAATTGACTATTCAGGATAATCC 58.921 37.037 13.59 0.00 36.58 3.01
2423 3955 8.974060 TTACAAAAACAACTAGACAATCCTCT 57.026 30.769 0.00 0.00 0.00 3.69
2424 3956 7.497925 ACAAAAACAACTAGACAATCCTCTC 57.502 36.000 0.00 0.00 0.00 3.20
2425 3957 7.283329 ACAAAAACAACTAGACAATCCTCTCT 58.717 34.615 0.00 0.00 0.00 3.10
2426 3958 7.775561 ACAAAAACAACTAGACAATCCTCTCTT 59.224 33.333 0.00 0.00 0.00 2.85
2427 3959 7.971183 AAAACAACTAGACAATCCTCTCTTC 57.029 36.000 0.00 0.00 0.00 2.87
2428 3960 6.926630 AACAACTAGACAATCCTCTCTTCT 57.073 37.500 0.00 0.00 0.00 2.85
2429 3961 6.926630 ACAACTAGACAATCCTCTCTTCTT 57.073 37.500 0.00 0.00 0.00 2.52
2430 3962 6.930731 ACAACTAGACAATCCTCTCTTCTTC 58.069 40.000 0.00 0.00 0.00 2.87
2432 3964 7.015682 ACAACTAGACAATCCTCTCTTCTTCAA 59.984 37.037 0.00 0.00 0.00 2.69
2433 3965 6.930731 ACTAGACAATCCTCTCTTCTTCAAC 58.069 40.000 0.00 0.00 0.00 3.18
2434 3966 5.815233 AGACAATCCTCTCTTCTTCAACA 57.185 39.130 0.00 0.00 0.00 3.33
2436 3968 5.306678 AGACAATCCTCTCTTCTTCAACAGT 59.693 40.000 0.00 0.00 0.00 3.55
2437 3969 5.934781 ACAATCCTCTCTTCTTCAACAGTT 58.065 37.500 0.00 0.00 0.00 3.16
2438 3970 5.762218 ACAATCCTCTCTTCTTCAACAGTTG 59.238 40.000 6.99 6.99 0.00 3.16
2439 3971 5.815233 ATCCTCTCTTCTTCAACAGTTGA 57.185 39.130 12.24 12.24 38.04 3.18
2440 3972 4.950050 TCCTCTCTTCTTCAACAGTTGAC 58.050 43.478 15.93 0.00 39.87 3.18
2441 3973 4.405680 TCCTCTCTTCTTCAACAGTTGACA 59.594 41.667 15.93 2.79 39.87 3.58
2443 3975 5.586243 CCTCTCTTCTTCAACAGTTGACAAA 59.414 40.000 15.93 11.51 39.87 2.83
2445 3977 6.842163 TCTCTTCTTCAACAGTTGACAAAAC 58.158 36.000 15.93 0.00 39.87 2.43
2449 3981 5.457140 TCTTCAACAGTTGACAAAACACAC 58.543 37.500 15.93 0.00 39.87 3.82
2450 3982 3.816091 TCAACAGTTGACAAAACACACG 58.184 40.909 12.24 0.00 34.08 4.49
2453 3985 1.135546 CAGTTGACAAAACACACGGCA 60.136 47.619 0.00 0.00 0.00 5.69
2454 3986 1.542030 AGTTGACAAAACACACGGCAA 59.458 42.857 0.00 0.00 0.00 4.52
2455 3987 1.917303 GTTGACAAAACACACGGCAAG 59.083 47.619 0.00 0.00 0.00 4.01
2456 3988 0.179150 TGACAAAACACACGGCAAGC 60.179 50.000 0.00 0.00 0.00 4.01
2458 3990 0.530288 ACAAAACACACGGCAAGCTT 59.470 45.000 0.00 0.00 0.00 3.74
2459 3991 1.199624 CAAAACACACGGCAAGCTTC 58.800 50.000 0.00 0.00 0.00 3.86
2461 3993 1.961793 AAACACACGGCAAGCTTCTA 58.038 45.000 0.00 0.00 0.00 2.10
2462 3994 2.185004 AACACACGGCAAGCTTCTAT 57.815 45.000 0.00 0.00 0.00 1.98
2463 3995 1.726853 ACACACGGCAAGCTTCTATC 58.273 50.000 0.00 0.00 0.00 2.08
2464 3996 1.001974 ACACACGGCAAGCTTCTATCA 59.998 47.619 0.00 0.00 0.00 2.15
2465 3997 2.283298 CACACGGCAAGCTTCTATCAT 58.717 47.619 0.00 0.00 0.00 2.45
2466 3998 3.118775 ACACACGGCAAGCTTCTATCATA 60.119 43.478 0.00 0.00 0.00 2.15
2468 4000 4.332543 CACACGGCAAGCTTCTATCATAAA 59.667 41.667 0.00 0.00 0.00 1.40
2469 4001 4.941263 ACACGGCAAGCTTCTATCATAAAA 59.059 37.500 0.00 0.00 0.00 1.52
2471 4003 6.765989 ACACGGCAAGCTTCTATCATAAAATA 59.234 34.615 0.00 0.00 0.00 1.40
2472 4004 7.445402 ACACGGCAAGCTTCTATCATAAAATAT 59.555 33.333 0.00 0.00 0.00 1.28
2473 4005 7.747799 CACGGCAAGCTTCTATCATAAAATATG 59.252 37.037 0.00 0.00 0.00 1.78
2476 4008 7.967303 GGCAAGCTTCTATCATAAAATATGCTC 59.033 37.037 0.00 0.00 0.00 4.26
2478 4010 7.840342 AGCTTCTATCATAAAATATGCTCGG 57.160 36.000 0.00 0.00 0.00 4.63
2480 4012 8.531982 AGCTTCTATCATAAAATATGCTCGGTA 58.468 33.333 0.00 0.00 0.00 4.02
2481 4013 8.596380 GCTTCTATCATAAAATATGCTCGGTAC 58.404 37.037 0.00 0.00 0.00 3.34
2482 4014 8.997621 TTCTATCATAAAATATGCTCGGTACC 57.002 34.615 0.16 0.16 0.00 3.34
2483 4015 7.553334 TCTATCATAAAATATGCTCGGTACCC 58.447 38.462 6.25 0.00 0.00 3.69
2484 4016 5.554437 TCATAAAATATGCTCGGTACCCA 57.446 39.130 6.25 0.00 0.00 4.51
2485 4017 5.931294 TCATAAAATATGCTCGGTACCCAA 58.069 37.500 6.25 0.00 0.00 4.12
2486 4018 5.761234 TCATAAAATATGCTCGGTACCCAAC 59.239 40.000 6.25 0.00 0.00 3.77
2500 4032 2.871453 ACCCAACCACCAACATACTTC 58.129 47.619 0.00 0.00 0.00 3.01
2501 4033 2.175931 ACCCAACCACCAACATACTTCA 59.824 45.455 0.00 0.00 0.00 3.02
2502 4034 3.226777 CCCAACCACCAACATACTTCAA 58.773 45.455 0.00 0.00 0.00 2.69
2503 4035 3.831911 CCCAACCACCAACATACTTCAAT 59.168 43.478 0.00 0.00 0.00 2.57
2504 4036 5.013547 CCCAACCACCAACATACTTCAATA 58.986 41.667 0.00 0.00 0.00 1.90
2505 4037 5.656416 CCCAACCACCAACATACTTCAATAT 59.344 40.000 0.00 0.00 0.00 1.28
2506 4038 6.405731 CCCAACCACCAACATACTTCAATATG 60.406 42.308 0.00 0.00 38.34 1.78
2508 4040 7.068593 CCAACCACCAACATACTTCAATATGAT 59.931 37.037 0.00 0.00 36.27 2.45
2509 4041 7.572523 ACCACCAACATACTTCAATATGATG 57.427 36.000 0.00 0.00 36.27 3.07
2511 4043 8.000709 ACCACCAACATACTTCAATATGATGAT 58.999 33.333 5.02 0.00 37.47 2.45
2512 4044 8.294577 CCACCAACATACTTCAATATGATGATG 58.705 37.037 5.02 0.00 37.47 3.07
2513 4045 9.059260 CACCAACATACTTCAATATGATGATGA 57.941 33.333 5.02 0.00 37.47 2.92
2514 4046 9.281371 ACCAACATACTTCAATATGATGATGAG 57.719 33.333 5.02 0.00 37.47 2.90
2515 4047 8.727910 CCAACATACTTCAATATGATGATGAGG 58.272 37.037 5.02 0.00 37.47 3.86
2519 4051 9.597170 CATACTTCAATATGATGATGAGGTAGG 57.403 37.037 9.08 6.29 38.50 3.18
2520 4052 7.862274 ACTTCAATATGATGATGAGGTAGGA 57.138 36.000 0.86 0.00 32.44 2.94
2522 4054 8.538701 ACTTCAATATGATGATGAGGTAGGATC 58.461 37.037 0.86 0.00 32.44 3.36
2524 4056 8.676397 TCAATATGATGATGAGGTAGGATCTT 57.324 34.615 0.00 0.00 0.00 2.40
2525 4057 8.756927 TCAATATGATGATGAGGTAGGATCTTC 58.243 37.037 0.00 0.00 0.00 2.87
2526 4058 8.537858 CAATATGATGATGAGGTAGGATCTTCA 58.462 37.037 0.00 0.00 37.25 3.02
2527 4059 8.676397 ATATGATGATGAGGTAGGATCTTCAA 57.324 34.615 0.00 0.00 36.74 2.69
2528 4060 6.813293 TGATGATGAGGTAGGATCTTCAAA 57.187 37.500 0.00 0.00 35.33 2.69
2529 4061 6.824553 TGATGATGAGGTAGGATCTTCAAAG 58.175 40.000 0.00 0.00 35.33 2.77
2530 4062 6.385176 TGATGATGAGGTAGGATCTTCAAAGT 59.615 38.462 0.00 0.00 35.33 2.66
2531 4063 5.982356 TGATGAGGTAGGATCTTCAAAGTG 58.018 41.667 0.00 0.00 30.48 3.16
2532 4064 5.721480 TGATGAGGTAGGATCTTCAAAGTGA 59.279 40.000 0.00 0.00 30.48 3.41
2533 4065 5.667539 TGAGGTAGGATCTTCAAAGTGAG 57.332 43.478 0.00 0.00 0.00 3.51
2534 4066 5.333581 TGAGGTAGGATCTTCAAAGTGAGA 58.666 41.667 0.00 0.00 0.00 3.27
2535 4067 5.780282 TGAGGTAGGATCTTCAAAGTGAGAA 59.220 40.000 0.00 0.00 0.00 2.87
2558 4090 9.790344 AGAATCATCAACTATCCTTTCTAATGG 57.210 33.333 0.00 0.00 0.00 3.16
2559 4091 7.992754 ATCATCAACTATCCTTTCTAATGGC 57.007 36.000 0.00 0.00 0.00 4.40
2560 4092 7.141758 TCATCAACTATCCTTTCTAATGGCT 57.858 36.000 0.00 0.00 0.00 4.75
2561 4093 7.577303 TCATCAACTATCCTTTCTAATGGCTT 58.423 34.615 0.00 0.00 0.00 4.35
2580 4112 5.505173 GCTTAATATTGCCAGCTTCAGAA 57.495 39.130 0.00 0.00 0.00 3.02
2582 4114 5.975939 GCTTAATATTGCCAGCTTCAGAAAG 59.024 40.000 0.00 0.00 35.47 2.62
2583 4115 4.996788 AATATTGCCAGCTTCAGAAAGG 57.003 40.909 0.00 0.00 32.79 3.11
2584 4116 1.553706 ATTGCCAGCTTCAGAAAGGG 58.446 50.000 0.00 0.00 32.79 3.95
2585 4117 0.185901 TTGCCAGCTTCAGAAAGGGT 59.814 50.000 0.00 0.00 32.79 4.34
2586 4118 0.538057 TGCCAGCTTCAGAAAGGGTG 60.538 55.000 0.00 0.00 32.79 4.61
2587 4119 1.871126 GCCAGCTTCAGAAAGGGTGC 61.871 60.000 0.00 0.00 32.79 5.01
2589 4121 0.603707 CAGCTTCAGAAAGGGTGCGA 60.604 55.000 0.00 0.00 32.79 5.10
2590 4122 0.603975 AGCTTCAGAAAGGGTGCGAC 60.604 55.000 0.00 0.00 32.79 5.19
2592 4124 1.151668 CTTCAGAAAGGGTGCGACTG 58.848 55.000 0.00 0.00 0.00 3.51
2594 4126 1.118965 TCAGAAAGGGTGCGACTGGA 61.119 55.000 0.00 0.00 0.00 3.86
2596 4128 0.472471 AGAAAGGGTGCGACTGGAAA 59.528 50.000 0.00 0.00 0.00 3.13
2597 4129 0.875059 GAAAGGGTGCGACTGGAAAG 59.125 55.000 0.00 0.00 0.00 2.62
2598 4130 0.537371 AAAGGGTGCGACTGGAAAGG 60.537 55.000 0.00 0.00 0.00 3.11
2600 4132 2.032681 GGTGCGACTGGAAAGGCT 59.967 61.111 0.00 0.00 0.00 4.58
2601 4133 1.295423 GGTGCGACTGGAAAGGCTA 59.705 57.895 0.00 0.00 0.00 3.93
2602 4134 0.107654 GGTGCGACTGGAAAGGCTAT 60.108 55.000 0.00 0.00 0.00 2.97
2603 4135 1.291132 GTGCGACTGGAAAGGCTATC 58.709 55.000 0.00 0.00 0.00 2.08
2604 4136 0.179111 TGCGACTGGAAAGGCTATCG 60.179 55.000 0.00 0.00 0.00 2.92
2605 4137 0.179108 GCGACTGGAAAGGCTATCGT 60.179 55.000 0.00 0.00 32.32 3.73
2607 4139 1.134367 CGACTGGAAAGGCTATCGTCA 59.866 52.381 0.00 0.00 0.00 4.35
2608 4140 2.541556 GACTGGAAAGGCTATCGTCAC 58.458 52.381 0.00 0.00 0.00 3.67
2609 4141 1.899814 ACTGGAAAGGCTATCGTCACA 59.100 47.619 0.00 0.00 0.00 3.58
2610 4142 2.301870 ACTGGAAAGGCTATCGTCACAA 59.698 45.455 0.00 0.00 0.00 3.33
2611 4143 2.673368 CTGGAAAGGCTATCGTCACAAC 59.327 50.000 0.00 0.00 0.00 3.32
2612 4144 2.301870 TGGAAAGGCTATCGTCACAACT 59.698 45.455 0.00 0.00 0.00 3.16
2613 4145 2.673368 GGAAAGGCTATCGTCACAACTG 59.327 50.000 0.00 0.00 0.00 3.16
2615 4147 2.949451 AGGCTATCGTCACAACTGAG 57.051 50.000 0.00 0.00 0.00 3.35
2616 4148 1.134965 AGGCTATCGTCACAACTGAGC 60.135 52.381 0.00 0.00 0.00 4.26
2618 4150 2.337583 GCTATCGTCACAACTGAGCAA 58.662 47.619 0.00 0.00 0.00 3.91
2619 4151 2.346847 GCTATCGTCACAACTGAGCAAG 59.653 50.000 0.00 0.00 0.00 4.01
2621 4153 2.140065 TCGTCACAACTGAGCAAGAG 57.860 50.000 0.00 0.00 0.00 2.85
2622 4154 0.510359 CGTCACAACTGAGCAAGAGC 59.490 55.000 0.00 0.00 42.56 4.09
2623 4155 1.586422 GTCACAACTGAGCAAGAGCA 58.414 50.000 0.00 0.00 45.49 4.26
2626 4158 2.158914 TCACAACTGAGCAAGAGCAGAA 60.159 45.455 0.00 0.00 45.49 3.02
2627 4159 2.223611 CACAACTGAGCAAGAGCAGAAG 59.776 50.000 0.00 0.00 45.49 2.85
2628 4160 2.103771 ACAACTGAGCAAGAGCAGAAGA 59.896 45.455 0.00 0.00 45.49 2.87
2629 4161 2.737783 CAACTGAGCAAGAGCAGAAGAG 59.262 50.000 0.00 0.00 45.49 2.85
2631 4163 1.549620 CTGAGCAAGAGCAGAAGAGGA 59.450 52.381 0.00 0.00 45.49 3.71
2632 4164 2.168936 CTGAGCAAGAGCAGAAGAGGAT 59.831 50.000 0.00 0.00 45.49 3.24
2633 4165 3.369175 TGAGCAAGAGCAGAAGAGGATA 58.631 45.455 0.00 0.00 45.49 2.59
2634 4166 3.131933 TGAGCAAGAGCAGAAGAGGATAC 59.868 47.826 0.00 0.00 45.49 2.24
2637 4169 3.131933 GCAAGAGCAGAAGAGGATACTGA 59.868 47.826 0.00 0.00 45.47 3.41
2649 4181 2.990941 GGATACTGACGCATTTGCATG 58.009 47.619 3.13 0.00 42.21 4.06
2652 4184 2.054687 ACTGACGCATTTGCATGTTG 57.945 45.000 3.13 0.00 42.21 3.33
2656 4763 3.500014 TGACGCATTTGCATGTTGTATG 58.500 40.909 3.13 0.00 42.21 2.39
2659 4766 5.065731 TGACGCATTTGCATGTTGTATGATA 59.934 36.000 3.13 0.00 42.21 2.15
2670 4777 9.489084 TGCATGTTGTATGATACTATAAGGAAC 57.511 33.333 4.03 0.00 0.00 3.62
2671 4778 8.936864 GCATGTTGTATGATACTATAAGGAACC 58.063 37.037 4.03 0.00 0.00 3.62
2673 4780 9.998106 ATGTTGTATGATACTATAAGGAACCAC 57.002 33.333 4.03 0.00 0.00 4.16
2674 4781 9.209048 TGTTGTATGATACTATAAGGAACCACT 57.791 33.333 4.03 0.00 0.00 4.00
2675 4782 9.694137 GTTGTATGATACTATAAGGAACCACTC 57.306 37.037 4.03 0.00 0.00 3.51
2676 4783 8.418597 TGTATGATACTATAAGGAACCACTCC 57.581 38.462 4.03 0.00 45.81 3.85
2691 4798 4.783764 CCACTCCTTGGTTACCAAAATC 57.216 45.455 18.10 0.00 43.44 2.17
2692 4799 3.190535 CCACTCCTTGGTTACCAAAATCG 59.809 47.826 18.10 6.22 43.44 3.34
2694 4801 4.700213 CACTCCTTGGTTACCAAAATCGAT 59.300 41.667 18.10 0.00 43.44 3.59
2695 4802 4.700213 ACTCCTTGGTTACCAAAATCGATG 59.300 41.667 18.10 4.43 43.44 3.84
2698 4805 5.878116 TCCTTGGTTACCAAAATCGATGTAG 59.122 40.000 18.10 2.02 43.44 2.74
2699 4806 5.878116 CCTTGGTTACCAAAATCGATGTAGA 59.122 40.000 18.10 0.00 43.44 2.59
2700 4807 6.373216 CCTTGGTTACCAAAATCGATGTAGAA 59.627 38.462 18.10 0.00 43.44 2.10
2703 4810 8.428186 TGGTTACCAAAATCGATGTAGAATAC 57.572 34.615 0.00 0.00 43.42 1.89
2708 4815 8.786826 ACCAAAATCGATGTAGAATACTTCAA 57.213 30.769 0.00 0.00 43.61 2.69
2709 4816 9.226606 ACCAAAATCGATGTAGAATACTTCAAA 57.773 29.630 0.00 0.00 43.61 2.69
2723 4830 8.883731 AGAATACTTCAAATTTGTCATCTACGG 58.116 33.333 17.47 2.50 0.00 4.02
2724 4831 8.786826 AATACTTCAAATTTGTCATCTACGGA 57.213 30.769 17.47 0.00 0.00 4.69
2725 4832 8.964476 ATACTTCAAATTTGTCATCTACGGAT 57.036 30.769 17.47 0.00 0.00 4.18
2726 4833 7.308782 ACTTCAAATTTGTCATCTACGGATC 57.691 36.000 17.47 0.00 0.00 3.36
2727 4834 6.316390 ACTTCAAATTTGTCATCTACGGATCC 59.684 38.462 17.47 0.00 0.00 3.36
2728 4835 4.808895 TCAAATTTGTCATCTACGGATCCG 59.191 41.667 32.20 32.20 46.03 4.18
2729 4836 4.665833 AATTTGTCATCTACGGATCCGA 57.334 40.909 39.55 21.58 42.83 4.55
2730 4837 3.431922 TTTGTCATCTACGGATCCGAC 57.568 47.619 39.55 25.25 42.83 4.79
2732 4839 0.237761 GTCATCTACGGATCCGACGG 59.762 60.000 39.55 25.68 42.83 4.79
2733 4840 1.081376 CATCTACGGATCCGACGGC 60.081 63.158 39.55 0.00 42.83 5.68
2734 4841 1.228184 ATCTACGGATCCGACGGCT 60.228 57.895 39.55 19.85 42.83 5.52
2735 4842 1.235948 ATCTACGGATCCGACGGCTC 61.236 60.000 39.55 9.44 42.83 4.70
2736 4843 2.903855 TACGGATCCGACGGCTCC 60.904 66.667 39.55 24.01 42.83 4.70
2737 4844 3.411114 TACGGATCCGACGGCTCCT 62.411 63.158 39.55 19.73 42.83 3.69
2738 4845 3.967335 CGGATCCGACGGCTCCTC 61.967 72.222 30.62 14.07 42.83 3.71
2750 4997 1.342672 GGCTCCTCGGGGTCCAAATA 61.343 60.000 0.00 0.00 0.00 1.40
2752 4999 1.746171 GCTCCTCGGGGTCCAAATAAC 60.746 57.143 0.00 0.00 0.00 1.89
2755 5002 1.408266 CCTCGGGGTCCAAATAACCTG 60.408 57.143 0.00 0.00 36.97 4.00
2759 5006 1.824852 GGGGTCCAAATAACCTGCAAG 59.175 52.381 0.00 0.00 36.97 4.01
2763 5010 3.826729 GGTCCAAATAACCTGCAAGAGTT 59.173 43.478 0.00 0.00 34.07 3.01
2765 5012 5.652452 GGTCCAAATAACCTGCAAGAGTTAT 59.348 40.000 9.51 9.51 39.99 1.89
2766 5013 6.826741 GGTCCAAATAACCTGCAAGAGTTATA 59.173 38.462 13.76 0.77 38.49 0.98
2767 5014 7.338449 GGTCCAAATAACCTGCAAGAGTTATAA 59.662 37.037 13.76 0.00 38.49 0.98
2768 5015 8.903820 GTCCAAATAACCTGCAAGAGTTATAAT 58.096 33.333 13.76 6.61 38.49 1.28
2769 5016 8.902806 TCCAAATAACCTGCAAGAGTTATAATG 58.097 33.333 13.76 14.35 38.49 1.90
2770 5017 8.137437 CCAAATAACCTGCAAGAGTTATAATGG 58.863 37.037 20.22 20.22 38.49 3.16
2774 5021 7.961326 AACCTGCAAGAGTTATAATGGAAAT 57.039 32.000 0.00 0.00 34.07 2.17
2779 5026 6.039717 TGCAAGAGTTATAATGGAAATGCTCC 59.960 38.462 0.00 0.00 45.64 4.70
2785 5032 8.697507 AGTTATAATGGAAATGCTCCTTTAGG 57.302 34.615 5.45 0.00 43.49 2.69
2786 5033 8.502738 AGTTATAATGGAAATGCTCCTTTAGGA 58.497 33.333 0.00 0.00 43.49 2.94
2787 5034 9.301897 GTTATAATGGAAATGCTCCTTTAGGAT 57.698 33.333 0.00 0.00 43.49 3.24
2795 5042 7.175119 GGAAATGCTCCTTTAGGATATTGTACC 59.825 40.741 0.00 5.57 44.46 3.34
2796 5043 6.763715 ATGCTCCTTTAGGATATTGTACCA 57.236 37.500 0.00 0.00 44.46 3.25
2797 5044 6.763715 TGCTCCTTTAGGATATTGTACCAT 57.236 37.500 0.00 0.00 44.46 3.55
2799 5046 7.582719 TGCTCCTTTAGGATATTGTACCATTT 58.417 34.615 0.00 0.00 44.46 2.32
2802 5049 9.799106 CTCCTTTAGGATATTGTACCATTTCAT 57.201 33.333 0.00 0.00 44.46 2.57
2845 5350 7.986085 ACTAAGTTGTCATAAGAGCAAATGT 57.014 32.000 0.00 0.00 0.00 2.71
2848 5353 9.979270 CTAAGTTGTCATAAGAGCAAATGTAAG 57.021 33.333 0.00 0.00 0.00 2.34
2849 5354 6.846350 AGTTGTCATAAGAGCAAATGTAAGC 58.154 36.000 0.00 0.00 0.00 3.09
2852 5357 6.788243 TGTCATAAGAGCAAATGTAAGCATG 58.212 36.000 0.00 0.00 35.15 4.06
2853 5358 6.183360 TGTCATAAGAGCAAATGTAAGCATGG 60.183 38.462 0.00 0.00 35.15 3.66
2854 5359 6.038603 GTCATAAGAGCAAATGTAAGCATGGA 59.961 38.462 0.00 0.00 35.15 3.41
2871 5376 3.663995 TGGAACATTGCACTGAAATGG 57.336 42.857 11.48 0.00 38.98 3.16
2872 5377 2.299582 TGGAACATTGCACTGAAATGGG 59.700 45.455 11.48 0.00 38.98 4.00
2873 5378 2.562298 GGAACATTGCACTGAAATGGGA 59.438 45.455 11.48 0.00 38.98 4.37
2890 5395 3.659786 TGGGACACACTACAAAATCTCG 58.340 45.455 0.00 0.00 0.00 4.04
2891 5396 3.070446 TGGGACACACTACAAAATCTCGT 59.930 43.478 0.00 0.00 0.00 4.18
2892 5397 3.678548 GGGACACACTACAAAATCTCGTC 59.321 47.826 0.00 0.00 0.00 4.20
2893 5398 4.557205 GGACACACTACAAAATCTCGTCT 58.443 43.478 0.00 0.00 0.00 4.18
2894 5399 5.336213 GGGACACACTACAAAATCTCGTCTA 60.336 44.000 0.00 0.00 0.00 2.59
2895 5400 6.331061 GGACACACTACAAAATCTCGTCTAT 58.669 40.000 0.00 0.00 0.00 1.98
2897 5402 7.331193 GGACACACTACAAAATCTCGTCTATTT 59.669 37.037 0.00 0.00 0.00 1.40
2898 5403 8.603242 ACACACTACAAAATCTCGTCTATTTT 57.397 30.769 0.00 0.00 37.08 1.82
2904 5409 6.707752 CAAAATCTCGTCTATTTTGCGATG 57.292 37.500 14.72 0.00 43.47 3.84
2906 5411 6.422776 AAATCTCGTCTATTTTGCGATGTT 57.577 33.333 0.00 0.00 34.04 2.71
2907 5412 6.422776 AATCTCGTCTATTTTGCGATGTTT 57.577 33.333 0.00 0.00 34.04 2.83
2908 5413 5.450376 TCTCGTCTATTTTGCGATGTTTC 57.550 39.130 0.00 0.00 34.04 2.78
2909 5414 4.926832 TCTCGTCTATTTTGCGATGTTTCA 59.073 37.500 0.00 0.00 34.04 2.69
2910 5415 4.953269 TCGTCTATTTTGCGATGTTTCAC 58.047 39.130 0.00 0.00 0.00 3.18
2911 5416 4.688879 TCGTCTATTTTGCGATGTTTCACT 59.311 37.500 0.00 0.00 0.00 3.41
2912 5417 5.178623 TCGTCTATTTTGCGATGTTTCACTT 59.821 36.000 0.00 0.00 0.00 3.16
2913 5418 5.281376 CGTCTATTTTGCGATGTTTCACTTG 59.719 40.000 0.00 0.00 0.00 3.16
2914 5419 6.142817 GTCTATTTTGCGATGTTTCACTTGT 58.857 36.000 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 5.421277 CAGTATGGTTGGGTTCGTTATACA 58.579 41.667 0.00 0.00 0.00 2.29
38 39 1.747355 GGCTTCTTGTGCTGCATATGT 59.253 47.619 5.27 0.00 0.00 2.29
45 46 2.633509 GCCAGGGCTTCTTGTGCTG 61.634 63.158 2.30 0.00 38.26 4.41
51 52 1.986210 GCCAATGCCAGGGCTTCTT 60.986 57.895 12.19 0.00 46.74 2.52
73 74 7.670364 TGTGAAGTCTTTGTAGATCAAGATCA 58.330 34.615 12.21 0.00 40.22 2.92
86 87 4.022589 ACCTGATGCAATGTGAAGTCTTTG 60.023 41.667 0.00 0.00 0.00 2.77
96 97 3.956199 CCCTTCATAACCTGATGCAATGT 59.044 43.478 0.00 0.00 32.72 2.71
108 109 2.081462 CGTTCACCACCCCTTCATAAC 58.919 52.381 0.00 0.00 0.00 1.89
111 112 0.036306 GTCGTTCACCACCCCTTCAT 59.964 55.000 0.00 0.00 0.00 2.57
127 128 1.667724 CCAGAGCCTTGCTTTATGTCG 59.332 52.381 0.00 0.00 39.88 4.35
132 133 0.609131 GCCACCAGAGCCTTGCTTTA 60.609 55.000 0.00 0.00 39.88 1.85
151 152 4.711846 TCCCGGATAATATCTCCATGTCTG 59.288 45.833 0.73 0.00 32.72 3.51
162 163 9.439461 TTCTATCAATGATCTCCCGGATAATAT 57.561 33.333 0.73 0.00 34.33 1.28
235 236 6.818142 TGACGAGATGATGAGCTTCAAAATTA 59.182 34.615 0.00 0.00 0.00 1.40
267 268 5.071250 TGACGCCCAATACCTAGATTACAAT 59.929 40.000 0.00 0.00 0.00 2.71
303 304 4.044825 ACAAGGTTTTGGTCATGGGGTATA 59.955 41.667 0.00 0.00 38.66 1.47
328 330 7.276218 ACTTTGATTTGCAATAATGTTCATCGG 59.724 33.333 0.00 0.00 36.15 4.18
329 331 8.105742 CACTTTGATTTGCAATAATGTTCATCG 58.894 33.333 0.00 0.00 36.15 3.84
346 348 4.410099 TGAGAAATCTGCCCACTTTGATT 58.590 39.130 0.00 0.00 0.00 2.57
377 380 1.869767 CCTATGCGCTCCATGTCTTTC 59.130 52.381 9.73 0.00 35.34 2.62
379 382 0.533755 GCCTATGCGCTCCATGTCTT 60.534 55.000 9.73 0.00 35.34 3.01
425 430 0.109723 AAGTAGGAAAAGCCCACGCA 59.890 50.000 0.00 0.00 37.37 5.24
428 433 2.858745 TGTCAAGTAGGAAAAGCCCAC 58.141 47.619 0.00 0.00 37.37 4.61
438 443 3.498927 ACGTAACGGATGTCAAGTAGG 57.501 47.619 0.00 0.00 0.00 3.18
483 489 0.608035 TTTCTTTGCGGGGCCTGTAG 60.608 55.000 15.16 9.36 0.00 2.74
505 511 4.280174 TCGCTGTAGGTGTAGACTCTTTTT 59.720 41.667 0.00 0.00 0.00 1.94
506 512 3.825014 TCGCTGTAGGTGTAGACTCTTTT 59.175 43.478 0.00 0.00 0.00 2.27
507 513 3.190953 GTCGCTGTAGGTGTAGACTCTTT 59.809 47.826 0.00 0.00 0.00 2.52
508 514 2.748532 GTCGCTGTAGGTGTAGACTCTT 59.251 50.000 0.00 0.00 0.00 2.85
509 515 2.358015 GTCGCTGTAGGTGTAGACTCT 58.642 52.381 0.00 0.00 0.00 3.24
510 516 1.062294 CGTCGCTGTAGGTGTAGACTC 59.938 57.143 0.00 0.00 0.00 3.36
511 517 1.085091 CGTCGCTGTAGGTGTAGACT 58.915 55.000 0.00 0.00 0.00 3.24
512 518 0.522915 GCGTCGCTGTAGGTGTAGAC 60.523 60.000 10.68 0.00 0.00 2.59
513 519 0.956902 TGCGTCGCTGTAGGTGTAGA 60.957 55.000 19.50 0.00 0.00 2.59
514 520 0.109458 TTGCGTCGCTGTAGGTGTAG 60.109 55.000 19.50 0.00 0.00 2.74
515 521 0.387622 GTTGCGTCGCTGTAGGTGTA 60.388 55.000 19.50 0.00 0.00 2.90
516 522 1.663702 GTTGCGTCGCTGTAGGTGT 60.664 57.895 19.50 0.00 0.00 4.16
517 523 1.014044 ATGTTGCGTCGCTGTAGGTG 61.014 55.000 19.50 0.00 0.00 4.00
520 526 1.695893 CCCATGTTGCGTCGCTGTAG 61.696 60.000 19.50 4.66 0.00 2.74
541 547 3.380004 CGGCCCATCAAAAGCTAATGTTA 59.620 43.478 0.00 0.00 0.00 2.41
542 548 2.166254 CGGCCCATCAAAAGCTAATGTT 59.834 45.455 0.00 0.00 0.00 2.71
543 549 1.750778 CGGCCCATCAAAAGCTAATGT 59.249 47.619 0.00 0.00 0.00 2.71
551 566 1.410850 TTTTGGCCGGCCCATCAAAA 61.411 50.000 41.75 34.02 44.89 2.44
627 642 5.065859 CAGAGTCCTGATGATAGCTATACGG 59.934 48.000 6.13 6.56 43.02 4.02
634 649 3.255642 GTCTCCAGAGTCCTGATGATAGC 59.744 52.174 0.00 0.00 43.02 2.97
635 650 3.826157 GGTCTCCAGAGTCCTGATGATAG 59.174 52.174 3.98 0.00 43.02 2.08
683 702 1.675219 GGTGGCTAGGGTTTCGTGA 59.325 57.895 0.00 0.00 0.00 4.35
724 760 4.309950 GTTGGGTCGCCTGGTCGT 62.310 66.667 9.66 0.00 0.00 4.34
780 837 2.751436 GCCATCCAAGGCGCTCAA 60.751 61.111 7.64 0.00 46.12 3.02
803 860 1.217779 GGTGAGAGTGAGGCTGCTC 59.782 63.158 0.00 0.00 0.00 4.26
810 867 0.099613 CGATCGGTGGTGAGAGTGAG 59.900 60.000 7.38 0.00 0.00 3.51
811 868 1.934220 GCGATCGGTGGTGAGAGTGA 61.934 60.000 18.30 0.00 0.00 3.41
812 869 1.517257 GCGATCGGTGGTGAGAGTG 60.517 63.158 18.30 0.00 0.00 3.51
813 870 2.711922 GGCGATCGGTGGTGAGAGT 61.712 63.158 18.30 0.00 0.00 3.24
814 871 2.105128 GGCGATCGGTGGTGAGAG 59.895 66.667 18.30 0.00 0.00 3.20
815 872 3.822192 CGGCGATCGGTGGTGAGA 61.822 66.667 18.30 0.00 34.75 3.27
846 903 4.796495 CCACCGGCTTGCCTACCC 62.796 72.222 0.00 0.00 0.00 3.69
849 906 4.028490 CACCCACCGGCTTGCCTA 62.028 66.667 0.00 0.00 0.00 3.93
905 986 8.629158 TCAAATGAAGCAACAGTTAAATACACT 58.371 29.630 0.00 0.00 0.00 3.55
1011 1095 1.359474 TCTAGCCTGAACTGGAGGACT 59.641 52.381 2.01 0.00 31.48 3.85
1049 1133 1.201098 GACATCGTCGACGCTAAGGC 61.201 60.000 32.19 19.15 39.60 4.35
1241 1340 3.055458 TGCTTCTGATGGGTCGTCATTTA 60.055 43.478 0.00 0.00 0.00 1.40
1276 1375 6.455646 CCCTTGATTTCGAACTTATGAAGTCG 60.456 42.308 0.00 0.00 41.91 4.18
1603 1715 1.019673 AGCGTGATGGATGACATTGC 58.980 50.000 0.00 0.00 40.72 3.56
1641 1753 6.372937 TGAACCGAAGCATATGTTTGAATGTA 59.627 34.615 9.76 0.00 0.00 2.29
1716 1840 7.305190 GCGGCAAGTAATAAATCAAACAATACG 60.305 37.037 0.00 0.00 0.00 3.06
1860 2860 3.498774 ATGCACTTGTCCTTCAACTCT 57.501 42.857 0.00 0.00 32.18 3.24
1901 2901 8.359642 TCTAGCAATAAAGTCAATGCACTTTTT 58.640 29.630 13.15 6.05 42.81 1.94
1902 2902 7.885297 TCTAGCAATAAAGTCAATGCACTTTT 58.115 30.769 13.15 0.00 42.81 2.27
1903 2903 7.452880 TCTAGCAATAAAGTCAATGCACTTT 57.547 32.000 12.72 12.72 46.27 2.66
1904 2904 7.452880 TTCTAGCAATAAAGTCAATGCACTT 57.547 32.000 0.00 0.00 41.18 3.16
1905 2905 7.391554 TCTTTCTAGCAATAAAGTCAATGCACT 59.608 33.333 0.00 0.00 41.18 4.40
1906 2906 7.530010 TCTTTCTAGCAATAAAGTCAATGCAC 58.470 34.615 0.00 0.00 41.18 4.57
1907 2907 7.686438 TCTTTCTAGCAATAAAGTCAATGCA 57.314 32.000 0.00 0.00 41.18 3.96
1908 2908 8.970691 TTTCTTTCTAGCAATAAAGTCAATGC 57.029 30.769 2.59 0.00 39.06 3.56
1909 2909 9.565213 CCTTTCTTTCTAGCAATAAAGTCAATG 57.435 33.333 10.51 0.40 34.88 2.82
1910 2910 9.520515 TCCTTTCTTTCTAGCAATAAAGTCAAT 57.479 29.630 10.51 0.00 34.88 2.57
1911 2911 8.918202 TCCTTTCTTTCTAGCAATAAAGTCAA 57.082 30.769 10.51 2.62 34.88 3.18
1912 2912 9.167311 GATCCTTTCTTTCTAGCAATAAAGTCA 57.833 33.333 10.51 0.77 34.88 3.41
1913 2913 8.616942 GGATCCTTTCTTTCTAGCAATAAAGTC 58.383 37.037 3.84 4.62 34.88 3.01
1914 2914 8.109634 TGGATCCTTTCTTTCTAGCAATAAAGT 58.890 33.333 14.23 0.00 34.88 2.66
1915 2915 8.511604 TGGATCCTTTCTTTCTAGCAATAAAG 57.488 34.615 14.23 6.16 34.65 1.85
1916 2916 8.877864 TTGGATCCTTTCTTTCTAGCAATAAA 57.122 30.769 14.23 0.00 0.00 1.40
1917 2917 8.328758 TCTTGGATCCTTTCTTTCTAGCAATAA 58.671 33.333 14.23 0.00 0.00 1.40
1918 2918 7.861629 TCTTGGATCCTTTCTTTCTAGCAATA 58.138 34.615 14.23 0.00 0.00 1.90
1919 2919 6.725364 TCTTGGATCCTTTCTTTCTAGCAAT 58.275 36.000 14.23 0.00 0.00 3.56
1920 2920 6.126863 TCTTGGATCCTTTCTTTCTAGCAA 57.873 37.500 14.23 0.00 0.00 3.91
1921 2921 5.762179 TCTTGGATCCTTTCTTTCTAGCA 57.238 39.130 14.23 0.00 0.00 3.49
1922 2922 5.065859 GCTTCTTGGATCCTTTCTTTCTAGC 59.934 44.000 14.23 5.91 0.00 3.42
1968 2991 2.010497 GAAGTTTGTGCCCTAGCTAGC 58.990 52.381 15.74 6.62 40.80 3.42
2003 3026 9.310449 TCTCTAAAGTCTAAACTCACCAACTAT 57.690 33.333 0.00 0.00 33.48 2.12
2004 3027 8.701908 TCTCTAAAGTCTAAACTCACCAACTA 57.298 34.615 0.00 0.00 33.48 2.24
2005 3028 7.506261 TCTCTCTAAAGTCTAAACTCACCAACT 59.494 37.037 0.00 0.00 33.48 3.16
2026 3049 8.085296 CCAGTATATATGTTCCAACACTCTCTC 58.915 40.741 0.00 0.00 42.51 3.20
2158 3221 5.257082 TGCACCCTTTCTAAGAAAAACAC 57.743 39.130 0.00 0.00 0.00 3.32
2174 3239 2.886730 AAATCCCCGTCGATGCACCC 62.887 60.000 0.00 0.00 0.00 4.61
2179 3244 2.201732 CACAGTAAATCCCCGTCGATG 58.798 52.381 0.00 0.00 0.00 3.84
2237 3308 4.595762 ACGCTCAGGACTAACAAACTAA 57.404 40.909 0.00 0.00 0.00 2.24
2249 3320 1.737735 CGCACATGAACGCTCAGGA 60.738 57.895 7.56 0.00 36.83 3.86
2250 3321 2.780643 CGCACATGAACGCTCAGG 59.219 61.111 0.00 0.00 39.31 3.86
2257 3328 1.656652 AGATAGGTGCGCACATGAAC 58.343 50.000 38.60 25.95 0.00 3.18
2259 3330 2.430694 AGTAAGATAGGTGCGCACATGA 59.569 45.455 38.60 24.28 0.00 3.07
2261 3332 3.543680 AAGTAAGATAGGTGCGCACAT 57.456 42.857 38.60 35.18 0.00 3.21
2262 3333 4.368315 CATAAGTAAGATAGGTGCGCACA 58.632 43.478 38.60 22.42 0.00 4.57
2263 3334 3.184581 GCATAAGTAAGATAGGTGCGCAC 59.815 47.826 32.15 32.15 0.00 5.34
2264 3335 3.181470 TGCATAAGTAAGATAGGTGCGCA 60.181 43.478 5.66 5.66 34.06 6.09
2265 3336 3.184581 GTGCATAAGTAAGATAGGTGCGC 59.815 47.826 0.00 0.00 34.99 6.09
2266 3337 3.425525 CGTGCATAAGTAAGATAGGTGCG 59.574 47.826 0.00 0.00 34.06 5.34
2267 3338 4.369182 ACGTGCATAAGTAAGATAGGTGC 58.631 43.478 0.00 0.00 0.00 5.01
2268 3339 4.982916 GGACGTGCATAAGTAAGATAGGTG 59.017 45.833 0.63 0.00 0.00 4.00
2271 3342 5.687730 CAGTGGACGTGCATAAGTAAGATAG 59.312 44.000 14.45 0.00 0.00 2.08
2272 3343 5.451381 CCAGTGGACGTGCATAAGTAAGATA 60.451 44.000 14.45 0.00 0.00 1.98
2273 3344 4.433615 CAGTGGACGTGCATAAGTAAGAT 58.566 43.478 14.45 0.00 0.00 2.40
2274 3345 3.368013 CCAGTGGACGTGCATAAGTAAGA 60.368 47.826 14.45 0.00 0.00 2.10
2275 3346 2.930040 CCAGTGGACGTGCATAAGTAAG 59.070 50.000 14.45 0.00 0.00 2.34
2278 3349 0.685097 ACCAGTGGACGTGCATAAGT 59.315 50.000 18.40 8.01 0.00 2.24
2279 3350 1.066858 AGACCAGTGGACGTGCATAAG 60.067 52.381 18.40 7.32 0.00 1.73
2280 3351 0.973632 AGACCAGTGGACGTGCATAA 59.026 50.000 18.40 0.00 0.00 1.90
2282 3353 0.532573 CTAGACCAGTGGACGTGCAT 59.467 55.000 18.40 0.00 0.00 3.96
2283 3354 1.532604 CCTAGACCAGTGGACGTGCA 61.533 60.000 18.40 5.33 0.00 4.57
2284 3355 1.215647 CCTAGACCAGTGGACGTGC 59.784 63.158 18.40 0.00 0.00 5.34
2285 3356 1.135139 CATCCTAGACCAGTGGACGTG 59.865 57.143 18.40 7.99 32.16 4.49
2286 3357 1.005569 TCATCCTAGACCAGTGGACGT 59.994 52.381 18.40 1.77 32.16 4.34
2287 3358 1.763968 TCATCCTAGACCAGTGGACG 58.236 55.000 18.40 0.00 32.16 4.79
2289 3360 2.964209 GGATCATCCTAGACCAGTGGA 58.036 52.381 18.40 0.00 32.53 4.02
2301 3372 2.158711 TCAGTGCCATCAAGGATCATCC 60.159 50.000 0.00 0.00 41.22 3.51
2302 3373 3.204306 TCAGTGCCATCAAGGATCATC 57.796 47.619 0.00 0.00 41.22 2.92
2303 3374 3.117625 ACATCAGTGCCATCAAGGATCAT 60.118 43.478 0.00 0.00 41.22 2.45
2304 3375 2.240414 ACATCAGTGCCATCAAGGATCA 59.760 45.455 0.00 0.00 41.22 2.92
2305 3376 2.928334 ACATCAGTGCCATCAAGGATC 58.072 47.619 0.00 0.00 41.22 3.36
2306 3377 3.200605 TGTACATCAGTGCCATCAAGGAT 59.799 43.478 0.00 0.00 41.22 3.24
2307 3378 2.571202 TGTACATCAGTGCCATCAAGGA 59.429 45.455 0.00 0.00 41.22 3.36
2308 3379 2.989909 TGTACATCAGTGCCATCAAGG 58.010 47.619 0.00 0.00 41.84 3.61
2309 3380 5.375417 TTTTGTACATCAGTGCCATCAAG 57.625 39.130 0.00 0.00 0.00 3.02
2342 3413 5.978919 TCAATTGTTGCAGAAGACATTTGTC 59.021 36.000 17.11 2.41 45.08 3.18
2343 3414 5.750067 GTCAATTGTTGCAGAAGACATTTGT 59.250 36.000 17.11 0.00 37.89 2.83
2344 3415 5.981315 AGTCAATTGTTGCAGAAGACATTTG 59.019 36.000 13.78 13.78 37.96 2.32
2347 3418 7.175467 TGAATAGTCAATTGTTGCAGAAGACAT 59.825 33.333 5.13 0.00 0.00 3.06
2348 3419 6.486320 TGAATAGTCAATTGTTGCAGAAGACA 59.514 34.615 5.13 0.00 0.00 3.41
2349 3420 6.902341 TGAATAGTCAATTGTTGCAGAAGAC 58.098 36.000 5.13 0.00 0.00 3.01
2350 3421 6.149973 CCTGAATAGTCAATTGTTGCAGAAGA 59.850 38.462 5.13 0.00 31.88 2.87
2351 3422 6.149973 TCCTGAATAGTCAATTGTTGCAGAAG 59.850 38.462 5.13 0.00 31.88 2.85
2352 3423 6.003326 TCCTGAATAGTCAATTGTTGCAGAA 58.997 36.000 5.13 0.00 31.88 3.02
2353 3424 5.559770 TCCTGAATAGTCAATTGTTGCAGA 58.440 37.500 5.13 0.00 31.88 4.26
2354 3425 5.885230 TCCTGAATAGTCAATTGTTGCAG 57.115 39.130 5.13 3.86 31.88 4.41
2355 3426 7.936496 TTATCCTGAATAGTCAATTGTTGCA 57.064 32.000 5.13 0.00 31.88 4.08
2397 3929 9.403583 AGAGGATTGTCTAGTTGTTTTTGTAAA 57.596 29.630 0.00 0.00 0.00 2.01
2398 3930 8.974060 AGAGGATTGTCTAGTTGTTTTTGTAA 57.026 30.769 0.00 0.00 0.00 2.41
2408 3940 7.015682 TGTTGAAGAAGAGAGGATTGTCTAGTT 59.984 37.037 0.00 0.00 0.00 2.24
2409 3941 6.495181 TGTTGAAGAAGAGAGGATTGTCTAGT 59.505 38.462 0.00 0.00 0.00 2.57
2410 3942 6.929625 TGTTGAAGAAGAGAGGATTGTCTAG 58.070 40.000 0.00 0.00 0.00 2.43
2411 3943 6.495181 ACTGTTGAAGAAGAGAGGATTGTCTA 59.505 38.462 0.00 0.00 0.00 2.59
2413 3945 5.546526 ACTGTTGAAGAAGAGAGGATTGTC 58.453 41.667 0.00 0.00 0.00 3.18
2415 3947 5.994054 TCAACTGTTGAAGAAGAGAGGATTG 59.006 40.000 20.14 0.00 36.59 2.67
2416 3948 5.994668 GTCAACTGTTGAAGAAGAGAGGATT 59.005 40.000 23.55 0.00 42.15 3.01
2417 3949 5.070981 TGTCAACTGTTGAAGAAGAGAGGAT 59.929 40.000 23.55 0.00 42.15 3.24
2418 3950 4.405680 TGTCAACTGTTGAAGAAGAGAGGA 59.594 41.667 23.55 0.00 42.15 3.71
2419 3951 4.697514 TGTCAACTGTTGAAGAAGAGAGG 58.302 43.478 23.55 0.00 42.15 3.69
2420 3952 6.668541 TTTGTCAACTGTTGAAGAAGAGAG 57.331 37.500 23.55 0.00 42.15 3.20
2422 3954 6.524586 GTGTTTTGTCAACTGTTGAAGAAGAG 59.475 38.462 23.55 0.00 42.15 2.85
2423 3955 6.016693 TGTGTTTTGTCAACTGTTGAAGAAGA 60.017 34.615 23.55 13.95 42.15 2.87
2424 3956 6.088085 GTGTGTTTTGTCAACTGTTGAAGAAG 59.912 38.462 23.55 0.00 42.15 2.85
2425 3957 5.918011 GTGTGTTTTGTCAACTGTTGAAGAA 59.082 36.000 23.55 17.41 42.15 2.52
2426 3958 5.457140 GTGTGTTTTGTCAACTGTTGAAGA 58.543 37.500 23.55 12.86 42.15 2.87
2427 3959 4.320690 CGTGTGTTTTGTCAACTGTTGAAG 59.679 41.667 23.55 0.00 42.15 3.02
2428 3960 4.222886 CGTGTGTTTTGTCAACTGTTGAA 58.777 39.130 23.55 11.95 42.15 2.69
2429 3961 3.365465 CCGTGTGTTTTGTCAACTGTTGA 60.365 43.478 18.69 18.69 37.33 3.18
2430 3962 2.914214 CCGTGTGTTTTGTCAACTGTTG 59.086 45.455 14.24 14.24 0.00 3.33
2432 3964 1.135517 GCCGTGTGTTTTGTCAACTGT 60.136 47.619 0.00 0.00 0.00 3.55
2433 3965 1.135546 TGCCGTGTGTTTTGTCAACTG 60.136 47.619 0.00 0.00 0.00 3.16
2434 3966 1.169577 TGCCGTGTGTTTTGTCAACT 58.830 45.000 0.00 0.00 0.00 3.16
2436 3968 1.734047 GCTTGCCGTGTGTTTTGTCAA 60.734 47.619 0.00 0.00 0.00 3.18
2437 3969 0.179150 GCTTGCCGTGTGTTTTGTCA 60.179 50.000 0.00 0.00 0.00 3.58
2438 3970 0.100503 AGCTTGCCGTGTGTTTTGTC 59.899 50.000 0.00 0.00 0.00 3.18
2439 3971 0.530288 AAGCTTGCCGTGTGTTTTGT 59.470 45.000 0.00 0.00 0.00 2.83
2440 3972 1.199624 GAAGCTTGCCGTGTGTTTTG 58.800 50.000 2.10 0.00 0.00 2.44
2441 3973 1.102978 AGAAGCTTGCCGTGTGTTTT 58.897 45.000 2.10 0.00 0.00 2.43
2443 3975 2.076863 GATAGAAGCTTGCCGTGTGTT 58.923 47.619 2.10 0.00 0.00 3.32
2445 3977 1.725641 TGATAGAAGCTTGCCGTGTG 58.274 50.000 2.10 0.00 0.00 3.82
2449 3981 6.744537 GCATATTTTATGATAGAAGCTTGCCG 59.255 38.462 2.10 0.00 0.00 5.69
2450 3982 7.824672 AGCATATTTTATGATAGAAGCTTGCC 58.175 34.615 2.10 0.00 0.00 4.52
2453 3985 7.880195 ACCGAGCATATTTTATGATAGAAGCTT 59.120 33.333 0.00 0.00 0.00 3.74
2454 3986 7.390027 ACCGAGCATATTTTATGATAGAAGCT 58.610 34.615 0.00 0.00 0.00 3.74
2455 3987 7.602517 ACCGAGCATATTTTATGATAGAAGC 57.397 36.000 0.00 0.00 0.00 3.86
2456 3988 9.088512 GGTACCGAGCATATTTTATGATAGAAG 57.911 37.037 0.00 0.00 0.00 2.85
2458 3990 7.553334 GGGTACCGAGCATATTTTATGATAGA 58.447 38.462 5.65 0.00 40.86 1.98
2459 3991 7.772332 GGGTACCGAGCATATTTTATGATAG 57.228 40.000 5.65 0.00 40.86 2.08
2478 4010 3.428413 AGTATGTTGGTGGTTGGGTAC 57.572 47.619 0.00 0.00 0.00 3.34
2480 4012 2.175931 TGAAGTATGTTGGTGGTTGGGT 59.824 45.455 0.00 0.00 0.00 4.51
2481 4013 2.870175 TGAAGTATGTTGGTGGTTGGG 58.130 47.619 0.00 0.00 0.00 4.12
2482 4014 6.376864 TCATATTGAAGTATGTTGGTGGTTGG 59.623 38.462 0.00 0.00 34.44 3.77
2483 4015 7.389803 TCATATTGAAGTATGTTGGTGGTTG 57.610 36.000 0.00 0.00 34.44 3.77
2484 4016 7.833682 TCATCATATTGAAGTATGTTGGTGGTT 59.166 33.333 0.00 0.00 34.66 3.67
2485 4017 7.345691 TCATCATATTGAAGTATGTTGGTGGT 58.654 34.615 0.00 0.00 34.66 4.16
2486 4018 7.806409 TCATCATATTGAAGTATGTTGGTGG 57.194 36.000 0.00 0.00 34.66 4.61
2488 4020 9.281371 CTCATCATCATATTGAAGTATGTTGGT 57.719 33.333 0.00 0.00 34.66 3.67
2489 4021 8.727910 CCTCATCATCATATTGAAGTATGTTGG 58.272 37.037 0.00 0.00 34.66 3.77
2494 4026 9.552695 TCCTACCTCATCATCATATTGAAGTAT 57.447 33.333 0.00 0.00 0.00 2.12
2496 4028 7.862274 TCCTACCTCATCATCATATTGAAGT 57.138 36.000 0.00 0.00 0.00 3.01
2497 4029 8.760735 AGATCCTACCTCATCATCATATTGAAG 58.239 37.037 0.00 0.00 0.00 3.02
2500 4032 8.537858 TGAAGATCCTACCTCATCATCATATTG 58.462 37.037 0.00 0.00 0.00 1.90
2501 4033 8.676397 TGAAGATCCTACCTCATCATCATATT 57.324 34.615 0.00 0.00 0.00 1.28
2502 4034 8.676397 TTGAAGATCCTACCTCATCATCATAT 57.324 34.615 0.00 0.00 29.38 1.78
2503 4035 8.496534 TTTGAAGATCCTACCTCATCATCATA 57.503 34.615 0.00 0.00 29.38 2.15
2504 4036 7.072202 ACTTTGAAGATCCTACCTCATCATCAT 59.928 37.037 0.00 0.00 29.38 2.45
2505 4037 6.385176 ACTTTGAAGATCCTACCTCATCATCA 59.615 38.462 0.00 0.00 0.00 3.07
2506 4038 6.705381 CACTTTGAAGATCCTACCTCATCATC 59.295 42.308 0.00 0.00 0.00 2.92
2508 4040 5.721480 TCACTTTGAAGATCCTACCTCATCA 59.279 40.000 0.00 0.00 0.00 3.07
2509 4041 6.097554 TCTCACTTTGAAGATCCTACCTCATC 59.902 42.308 0.00 0.00 0.00 2.92
2511 4043 5.333581 TCTCACTTTGAAGATCCTACCTCA 58.666 41.667 0.00 0.00 0.00 3.86
2512 4044 5.923733 TCTCACTTTGAAGATCCTACCTC 57.076 43.478 0.00 0.00 0.00 3.85
2513 4045 6.441924 TGATTCTCACTTTGAAGATCCTACCT 59.558 38.462 0.00 0.00 0.00 3.08
2514 4046 6.644347 TGATTCTCACTTTGAAGATCCTACC 58.356 40.000 0.00 0.00 0.00 3.18
2515 4047 7.984050 TGATGATTCTCACTTTGAAGATCCTAC 59.016 37.037 0.00 0.00 0.00 3.18
2517 4049 6.955364 TGATGATTCTCACTTTGAAGATCCT 58.045 36.000 0.00 0.00 0.00 3.24
2518 4050 7.336427 AGTTGATGATTCTCACTTTGAAGATCC 59.664 37.037 0.00 0.00 0.00 3.36
2519 4051 8.266392 AGTTGATGATTCTCACTTTGAAGATC 57.734 34.615 0.00 0.00 0.00 2.75
2520 4052 9.902684 ATAGTTGATGATTCTCACTTTGAAGAT 57.097 29.630 0.00 0.00 0.00 2.40
2522 4054 8.610896 GGATAGTTGATGATTCTCACTTTGAAG 58.389 37.037 0.00 0.00 0.00 3.02
2524 4056 7.855375 AGGATAGTTGATGATTCTCACTTTGA 58.145 34.615 0.00 0.00 0.00 2.69
2525 4057 8.503458 AAGGATAGTTGATGATTCTCACTTTG 57.497 34.615 0.00 0.00 0.00 2.77
2526 4058 9.171877 GAAAGGATAGTTGATGATTCTCACTTT 57.828 33.333 0.00 0.00 0.00 2.66
2527 4059 8.547173 AGAAAGGATAGTTGATGATTCTCACTT 58.453 33.333 0.00 0.00 0.00 3.16
2528 4060 8.088463 AGAAAGGATAGTTGATGATTCTCACT 57.912 34.615 0.00 0.00 0.00 3.41
2529 4061 9.823647 TTAGAAAGGATAGTTGATGATTCTCAC 57.176 33.333 0.00 0.00 0.00 3.51
2532 4064 9.790344 CCATTAGAAAGGATAGTTGATGATTCT 57.210 33.333 0.00 0.00 0.00 2.40
2533 4065 8.510505 GCCATTAGAAAGGATAGTTGATGATTC 58.489 37.037 0.00 0.00 0.00 2.52
2534 4066 8.223330 AGCCATTAGAAAGGATAGTTGATGATT 58.777 33.333 0.00 0.00 0.00 2.57
2535 4067 7.753630 AGCCATTAGAAAGGATAGTTGATGAT 58.246 34.615 0.00 0.00 0.00 2.45
2558 4090 5.505173 TTCTGAAGCTGGCAATATTAAGC 57.495 39.130 8.28 8.28 35.86 3.09
2559 4091 6.460676 CCCTTTCTGAAGCTGGCAATATTAAG 60.461 42.308 0.00 0.00 0.00 1.85
2560 4092 5.360714 CCCTTTCTGAAGCTGGCAATATTAA 59.639 40.000 0.00 0.00 0.00 1.40
2561 4093 4.889409 CCCTTTCTGAAGCTGGCAATATTA 59.111 41.667 0.00 0.00 0.00 0.98
2564 4096 2.041620 ACCCTTTCTGAAGCTGGCAATA 59.958 45.455 0.00 0.00 0.00 1.90
2566 4098 0.185901 ACCCTTTCTGAAGCTGGCAA 59.814 50.000 0.00 0.00 0.00 4.52
2567 4099 0.538057 CACCCTTTCTGAAGCTGGCA 60.538 55.000 0.00 0.00 0.00 4.92
2568 4100 1.871126 GCACCCTTTCTGAAGCTGGC 61.871 60.000 0.00 0.00 0.00 4.85
2569 4101 1.580845 CGCACCCTTTCTGAAGCTGG 61.581 60.000 0.00 0.00 0.00 4.85
2570 4102 0.603707 TCGCACCCTTTCTGAAGCTG 60.604 55.000 0.00 0.00 0.00 4.24
2572 4104 0.603975 AGTCGCACCCTTTCTGAAGC 60.604 55.000 0.00 0.00 0.00 3.86
2573 4105 1.151668 CAGTCGCACCCTTTCTGAAG 58.848 55.000 0.00 0.00 0.00 3.02
2574 4106 0.250295 CCAGTCGCACCCTTTCTGAA 60.250 55.000 0.00 0.00 0.00 3.02
2575 4107 1.118965 TCCAGTCGCACCCTTTCTGA 61.119 55.000 0.00 0.00 0.00 3.27
2576 4108 0.250295 TTCCAGTCGCACCCTTTCTG 60.250 55.000 0.00 0.00 0.00 3.02
2578 4110 0.875059 CTTTCCAGTCGCACCCTTTC 59.125 55.000 0.00 0.00 0.00 2.62
2580 4112 1.073199 CCTTTCCAGTCGCACCCTT 59.927 57.895 0.00 0.00 0.00 3.95
2582 4114 2.180159 TAGCCTTTCCAGTCGCACCC 62.180 60.000 0.00 0.00 0.00 4.61
2583 4115 0.107654 ATAGCCTTTCCAGTCGCACC 60.108 55.000 0.00 0.00 0.00 5.01
2584 4116 1.291132 GATAGCCTTTCCAGTCGCAC 58.709 55.000 0.00 0.00 0.00 5.34
2585 4117 0.179111 CGATAGCCTTTCCAGTCGCA 60.179 55.000 0.00 0.00 0.00 5.10
2586 4118 0.179108 ACGATAGCCTTTCCAGTCGC 60.179 55.000 0.00 0.00 42.67 5.19
2587 4119 1.134367 TGACGATAGCCTTTCCAGTCG 59.866 52.381 0.00 0.00 42.67 4.18
2589 4121 1.899814 TGTGACGATAGCCTTTCCAGT 59.100 47.619 0.00 0.00 42.67 4.00
2590 4122 2.672961 TGTGACGATAGCCTTTCCAG 57.327 50.000 0.00 0.00 42.67 3.86
2592 4124 2.673368 CAGTTGTGACGATAGCCTTTCC 59.327 50.000 0.00 0.00 42.67 3.13
2594 4126 3.589988 CTCAGTTGTGACGATAGCCTTT 58.410 45.455 0.00 0.00 42.67 3.11
2596 4128 1.134965 GCTCAGTTGTGACGATAGCCT 60.135 52.381 0.00 0.00 42.67 4.58
2597 4129 1.281899 GCTCAGTTGTGACGATAGCC 58.718 55.000 0.00 0.00 42.67 3.93
2598 4130 1.996292 TGCTCAGTTGTGACGATAGC 58.004 50.000 0.00 0.00 42.67 2.97
2600 4132 3.838120 CTCTTGCTCAGTTGTGACGATA 58.162 45.455 0.00 0.00 0.00 2.92
2601 4133 2.681706 CTCTTGCTCAGTTGTGACGAT 58.318 47.619 0.00 0.00 0.00 3.73
2602 4134 1.869754 GCTCTTGCTCAGTTGTGACGA 60.870 52.381 0.00 0.00 36.03 4.20
2603 4135 0.510359 GCTCTTGCTCAGTTGTGACG 59.490 55.000 0.00 0.00 36.03 4.35
2604 4136 1.530293 CTGCTCTTGCTCAGTTGTGAC 59.470 52.381 0.00 0.00 40.48 3.67
2605 4137 1.413812 TCTGCTCTTGCTCAGTTGTGA 59.586 47.619 0.00 0.00 40.48 3.58
2607 4139 2.103771 TCTTCTGCTCTTGCTCAGTTGT 59.896 45.455 0.00 0.00 40.48 3.32
2608 4140 2.737783 CTCTTCTGCTCTTGCTCAGTTG 59.262 50.000 0.00 0.00 40.48 3.16
2609 4141 2.289569 CCTCTTCTGCTCTTGCTCAGTT 60.290 50.000 0.00 0.00 40.48 3.16
2610 4142 1.275856 CCTCTTCTGCTCTTGCTCAGT 59.724 52.381 0.00 0.00 40.48 3.41
2611 4143 1.549620 TCCTCTTCTGCTCTTGCTCAG 59.450 52.381 0.00 0.00 40.48 3.35
2612 4144 1.637338 TCCTCTTCTGCTCTTGCTCA 58.363 50.000 0.00 0.00 40.48 4.26
2613 4145 2.985957 ATCCTCTTCTGCTCTTGCTC 57.014 50.000 0.00 0.00 40.48 4.26
2615 4147 3.131933 TCAGTATCCTCTTCTGCTCTTGC 59.868 47.826 0.00 0.00 40.20 4.01
2616 4148 4.681744 GTCAGTATCCTCTTCTGCTCTTG 58.318 47.826 0.00 0.00 0.00 3.02
2618 4150 2.948979 CGTCAGTATCCTCTTCTGCTCT 59.051 50.000 0.00 0.00 0.00 4.09
2619 4151 2.542824 GCGTCAGTATCCTCTTCTGCTC 60.543 54.545 0.00 0.00 0.00 4.26
2621 4153 1.135139 TGCGTCAGTATCCTCTTCTGC 59.865 52.381 0.00 0.00 0.00 4.26
2622 4154 3.724508 ATGCGTCAGTATCCTCTTCTG 57.275 47.619 0.00 0.00 0.00 3.02
2623 4155 4.437239 CAAATGCGTCAGTATCCTCTTCT 58.563 43.478 0.00 0.00 0.00 2.85
2626 4158 2.093500 TGCAAATGCGTCAGTATCCTCT 60.093 45.455 0.35 0.00 45.83 3.69
2627 4159 2.279741 TGCAAATGCGTCAGTATCCTC 58.720 47.619 0.35 0.00 45.83 3.71
2628 4160 2.401583 TGCAAATGCGTCAGTATCCT 57.598 45.000 0.35 0.00 45.83 3.24
2629 4161 2.355756 ACATGCAAATGCGTCAGTATCC 59.644 45.455 0.00 0.00 45.83 2.59
2631 4163 3.191162 ACAACATGCAAATGCGTCAGTAT 59.809 39.130 0.00 0.00 45.83 2.12
2632 4164 2.551887 ACAACATGCAAATGCGTCAGTA 59.448 40.909 0.00 0.00 45.83 2.74
2633 4165 1.337703 ACAACATGCAAATGCGTCAGT 59.662 42.857 0.00 0.00 45.83 3.41
2634 4166 2.054687 ACAACATGCAAATGCGTCAG 57.945 45.000 0.00 0.00 45.83 3.51
2635 4167 3.190118 TCATACAACATGCAAATGCGTCA 59.810 39.130 0.00 0.00 45.83 4.35
2637 4169 3.846423 TCATACAACATGCAAATGCGT 57.154 38.095 0.00 0.00 45.83 5.24
2644 4176 9.489084 GTTCCTTATAGTATCATACAACATGCA 57.511 33.333 0.00 0.00 0.00 3.96
2645 4177 8.936864 GGTTCCTTATAGTATCATACAACATGC 58.063 37.037 0.00 0.00 0.00 4.06
2649 4181 9.694137 GAGTGGTTCCTTATAGTATCATACAAC 57.306 37.037 0.00 0.00 0.00 3.32
2671 4778 4.069304 TCGATTTTGGTAACCAAGGAGTG 58.931 43.478 0.00 0.00 44.84 3.51
2673 4780 4.700213 ACATCGATTTTGGTAACCAAGGAG 59.300 41.667 0.00 0.00 44.84 3.69
2674 4781 4.658063 ACATCGATTTTGGTAACCAAGGA 58.342 39.130 0.00 0.00 44.84 3.36
2675 4782 5.878116 TCTACATCGATTTTGGTAACCAAGG 59.122 40.000 0.00 0.00 44.84 3.61
2676 4783 6.978343 TCTACATCGATTTTGGTAACCAAG 57.022 37.500 0.00 0.00 44.84 3.61
2677 4784 7.931578 ATTCTACATCGATTTTGGTAACCAA 57.068 32.000 0.00 0.00 42.29 3.67
2699 4806 8.786826 TCCGTAGATGACAAATTTGAAGTATT 57.213 30.769 24.64 0.44 0.00 1.89
2700 4807 8.964476 ATCCGTAGATGACAAATTTGAAGTAT 57.036 30.769 24.64 11.90 0.00 2.12
2703 4810 6.510157 CGGATCCGTAGATGACAAATTTGAAG 60.510 42.308 26.35 3.48 30.90 3.02
2706 4813 4.808895 TCGGATCCGTAGATGACAAATTTG 59.191 41.667 32.15 16.67 40.74 2.32
2708 4815 4.369182 GTCGGATCCGTAGATGACAAATT 58.631 43.478 32.15 0.00 40.74 1.82
2709 4816 3.550233 CGTCGGATCCGTAGATGACAAAT 60.550 47.826 32.15 0.00 40.74 2.32
2710 4817 2.223409 CGTCGGATCCGTAGATGACAAA 60.223 50.000 32.15 7.42 40.74 2.83
2711 4818 1.332686 CGTCGGATCCGTAGATGACAA 59.667 52.381 32.15 8.21 40.74 3.18
2713 4820 0.237761 CCGTCGGATCCGTAGATGAC 59.762 60.000 32.15 20.69 40.74 3.06
2714 4821 1.512996 GCCGTCGGATCCGTAGATGA 61.513 60.000 32.15 10.60 40.74 2.92
2715 4822 1.081376 GCCGTCGGATCCGTAGATG 60.081 63.158 32.15 18.74 40.74 2.90
2718 4825 2.638154 GAGCCGTCGGATCCGTAG 59.362 66.667 32.15 25.04 40.74 3.51
2732 4839 0.544697 TTATTTGGACCCCGAGGAGC 59.455 55.000 0.00 0.00 36.73 4.70
2733 4840 1.134189 GGTTATTTGGACCCCGAGGAG 60.134 57.143 0.00 0.00 36.73 3.69
2734 4841 0.913924 GGTTATTTGGACCCCGAGGA 59.086 55.000 0.00 0.00 36.73 3.71
2735 4842 0.916809 AGGTTATTTGGACCCCGAGG 59.083 55.000 0.00 0.00 37.93 4.63
2736 4843 2.017113 GCAGGTTATTTGGACCCCGAG 61.017 57.143 0.00 0.00 37.93 4.63
2737 4844 0.034863 GCAGGTTATTTGGACCCCGA 60.035 55.000 0.00 0.00 37.93 5.14
2738 4845 0.322997 TGCAGGTTATTTGGACCCCG 60.323 55.000 0.00 0.00 37.93 5.73
2741 4848 3.421844 ACTCTTGCAGGTTATTTGGACC 58.578 45.455 0.00 0.00 37.44 4.46
2742 4849 6.759497 ATAACTCTTGCAGGTTATTTGGAC 57.241 37.500 12.73 0.00 35.80 4.02
2743 4850 8.902806 CATTATAACTCTTGCAGGTTATTTGGA 58.097 33.333 19.34 6.38 38.83 3.53
2744 4851 8.137437 CCATTATAACTCTTGCAGGTTATTTGG 58.863 37.037 19.34 19.88 38.83 3.28
2747 4994 9.474313 TTTCCATTATAACTCTTGCAGGTTATT 57.526 29.630 19.34 7.00 38.83 1.40
2750 4997 7.631377 GCATTTCCATTATAACTCTTGCAGGTT 60.631 37.037 0.00 1.58 0.00 3.50
2752 4999 6.040166 AGCATTTCCATTATAACTCTTGCAGG 59.960 38.462 0.00 0.00 0.00 4.85
2755 5002 6.442112 GGAGCATTTCCATTATAACTCTTGC 58.558 40.000 0.00 0.00 46.01 4.01
2770 5017 7.719633 TGGTACAATATCCTAAAGGAGCATTTC 59.280 37.037 4.77 1.48 41.98 2.17
2774 5021 6.763715 ATGGTACAATATCCTAAAGGAGCA 57.236 37.500 4.77 0.00 46.59 4.26
2819 5066 9.502091 ACATTTGCTCTTATGACAACTTAGTTA 57.498 29.630 0.00 0.00 0.00 2.24
2820 5067 8.396272 ACATTTGCTCTTATGACAACTTAGTT 57.604 30.769 0.00 0.00 0.00 2.24
2824 5329 7.040478 TGCTTACATTTGCTCTTATGACAACTT 60.040 33.333 0.00 0.00 0.00 2.66
2826 5331 6.611381 TGCTTACATTTGCTCTTATGACAAC 58.389 36.000 0.00 0.00 0.00 3.32
2832 5337 6.377996 TGTTCCATGCTTACATTTGCTCTTAT 59.622 34.615 0.00 0.00 32.87 1.73
2833 5338 5.709631 TGTTCCATGCTTACATTTGCTCTTA 59.290 36.000 0.00 0.00 32.87 2.10
2836 5341 4.439305 TGTTCCATGCTTACATTTGCTC 57.561 40.909 0.00 0.00 32.87 4.26
2838 5343 4.201744 GCAATGTTCCATGCTTACATTTGC 60.202 41.667 12.70 14.25 39.70 3.68
2839 5344 4.930405 TGCAATGTTCCATGCTTACATTTG 59.070 37.500 12.70 10.48 39.70 2.32
2843 5348 3.057386 CAGTGCAATGTTCCATGCTTACA 60.057 43.478 5.87 0.00 42.97 2.41
2845 5350 3.419943 TCAGTGCAATGTTCCATGCTTA 58.580 40.909 14.62 0.00 42.97 3.09
2848 5353 2.728690 TTCAGTGCAATGTTCCATGC 57.271 45.000 14.62 0.00 42.86 4.06
2849 5354 3.930229 CCATTTCAGTGCAATGTTCCATG 59.070 43.478 14.62 11.26 30.73 3.66
2852 5357 2.562298 TCCCATTTCAGTGCAATGTTCC 59.438 45.455 14.62 0.00 30.73 3.62
2853 5358 3.005684 TGTCCCATTTCAGTGCAATGTTC 59.994 43.478 14.62 5.26 30.73 3.18
2854 5359 2.964464 TGTCCCATTTCAGTGCAATGTT 59.036 40.909 14.62 0.00 30.73 2.71
2857 5362 2.297033 GTGTGTCCCATTTCAGTGCAAT 59.703 45.455 0.00 0.00 0.00 3.56
2858 5363 1.680735 GTGTGTCCCATTTCAGTGCAA 59.319 47.619 0.00 0.00 0.00 4.08
2862 5367 4.431416 TTGTAGTGTGTCCCATTTCAGT 57.569 40.909 0.00 0.00 0.00 3.41
2863 5368 5.766150 TTTTGTAGTGTGTCCCATTTCAG 57.234 39.130 0.00 0.00 0.00 3.02
2866 5371 5.181245 CGAGATTTTGTAGTGTGTCCCATTT 59.819 40.000 0.00 0.00 0.00 2.32
2869 5374 3.070446 ACGAGATTTTGTAGTGTGTCCCA 59.930 43.478 0.00 0.00 0.00 4.37
2870 5375 3.660865 ACGAGATTTTGTAGTGTGTCCC 58.339 45.455 0.00 0.00 0.00 4.46
2871 5376 4.557205 AGACGAGATTTTGTAGTGTGTCC 58.443 43.478 0.00 0.00 0.00 4.02
2872 5377 7.813852 AATAGACGAGATTTTGTAGTGTGTC 57.186 36.000 0.00 0.00 0.00 3.67
2873 5378 8.495949 CAAAATAGACGAGATTTTGTAGTGTGT 58.504 33.333 17.90 0.00 44.09 3.72
2885 5390 5.580691 TGAAACATCGCAAAATAGACGAGAT 59.419 36.000 0.00 0.00 39.48 2.75
2887 5392 5.015733 GTGAAACATCGCAAAATAGACGAG 58.984 41.667 0.00 0.00 39.48 4.18
2888 5393 4.688879 AGTGAAACATCGCAAAATAGACGA 59.311 37.500 0.00 0.00 41.43 4.20
2889 5394 4.957971 AGTGAAACATCGCAAAATAGACG 58.042 39.130 0.00 0.00 41.43 4.18
2890 5395 6.142817 ACAAGTGAAACATCGCAAAATAGAC 58.857 36.000 0.00 0.00 41.43 2.59
2891 5396 6.312399 ACAAGTGAAACATCGCAAAATAGA 57.688 33.333 0.00 0.00 41.43 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.