Multiple sequence alignment - TraesCS1D01G034100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G034100 chr1D 100.000 4718 0 0 1 4718 14475904 14480621 0.000000e+00 8713.0
1 TraesCS1D01G034100 chr1D 93.360 738 49 0 1 738 38370757 38370020 0.000000e+00 1092.0
2 TraesCS1D01G034100 chr1D 100.000 40 0 0 3898 3937 14479763 14479802 1.820000e-09 75.0
3 TraesCS1D01G034100 chr1D 100.000 40 0 0 3860 3899 14479801 14479840 1.820000e-09 75.0
4 TraesCS1D01G034100 chr1A 91.528 1204 67 17 858 2038 15441421 15440230 0.000000e+00 1626.0
5 TraesCS1D01G034100 chr1A 94.487 1034 46 7 2868 3899 15439391 15438367 0.000000e+00 1583.0
6 TraesCS1D01G034100 chr1A 89.835 728 66 5 2112 2834 15440229 15439505 0.000000e+00 928.0
7 TraesCS1D01G034100 chr1A 88.978 372 21 5 4349 4718 15437490 15437137 4.330000e-120 442.0
8 TraesCS1D01G034100 chr1A 87.429 175 19 2 3898 4071 15438404 15438232 1.040000e-46 198.0
9 TraesCS1D01G034100 chr1B 92.952 979 51 8 2868 3833 20587252 20588225 0.000000e+00 1410.0
10 TraesCS1D01G034100 chr1B 86.093 1244 78 39 858 2038 20585200 20586411 0.000000e+00 1251.0
11 TraesCS1D01G034100 chr1B 90.141 710 65 4 2109 2814 20586409 20587117 0.000000e+00 918.0
12 TraesCS1D01G034100 chr1B 90.141 355 28 4 4369 4718 20589040 20589392 5.570000e-124 455.0
13 TraesCS1D01G034100 chr2B 93.271 743 49 1 1 743 733142602 733143343 0.000000e+00 1094.0
14 TraesCS1D01G034100 chr2B 93.001 743 52 0 1 743 385530205 385529463 0.000000e+00 1085.0
15 TraesCS1D01G034100 chr3D 93.136 743 48 3 1 743 113467238 113467977 0.000000e+00 1086.0
16 TraesCS1D01G034100 chr3D 93.001 743 52 0 1 743 541406784 541407526 0.000000e+00 1085.0
17 TraesCS1D01G034100 chr3D 92.246 748 57 1 1 748 547516557 547517303 0.000000e+00 1059.0
18 TraesCS1D01G034100 chr4B 92.598 743 52 2 1 743 302839667 302838928 0.000000e+00 1064.0
19 TraesCS1D01G034100 chr7B 92.369 747 56 1 1 747 362545739 362546484 0.000000e+00 1062.0
20 TraesCS1D01G034100 chr5B 92.236 747 53 5 4 750 635362661 635361920 0.000000e+00 1053.0
21 TraesCS1D01G034100 chr2A 91.045 67 6 0 2616 2682 31829957 31830023 1.810000e-14 91.6
22 TraesCS1D01G034100 chrUn 92.683 41 3 0 3059 3099 19129469 19129509 5.100000e-05 60.2
23 TraesCS1D01G034100 chr2D 100.000 31 0 0 1509 1539 29527229 29527259 1.830000e-04 58.4
24 TraesCS1D01G034100 chr6D 100.000 29 0 0 814 842 63715973 63715945 2.000000e-03 54.7
25 TraesCS1D01G034100 chr3A 92.308 39 1 1 814 852 742448102 742448066 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G034100 chr1D 14475904 14480621 4717 False 2954.333333 8713 100.00000 1 4718 3 chr1D.!!$F1 4717
1 TraesCS1D01G034100 chr1D 38370020 38370757 737 True 1092.000000 1092 93.36000 1 738 1 chr1D.!!$R1 737
2 TraesCS1D01G034100 chr1A 15437137 15441421 4284 True 955.400000 1626 90.45140 858 4718 5 chr1A.!!$R1 3860
3 TraesCS1D01G034100 chr1B 20585200 20589392 4192 False 1008.500000 1410 89.83175 858 4718 4 chr1B.!!$F1 3860
4 TraesCS1D01G034100 chr2B 733142602 733143343 741 False 1094.000000 1094 93.27100 1 743 1 chr2B.!!$F1 742
5 TraesCS1D01G034100 chr2B 385529463 385530205 742 True 1085.000000 1085 93.00100 1 743 1 chr2B.!!$R1 742
6 TraesCS1D01G034100 chr3D 113467238 113467977 739 False 1086.000000 1086 93.13600 1 743 1 chr3D.!!$F1 742
7 TraesCS1D01G034100 chr3D 541406784 541407526 742 False 1085.000000 1085 93.00100 1 743 1 chr3D.!!$F2 742
8 TraesCS1D01G034100 chr3D 547516557 547517303 746 False 1059.000000 1059 92.24600 1 748 1 chr3D.!!$F3 747
9 TraesCS1D01G034100 chr4B 302838928 302839667 739 True 1064.000000 1064 92.59800 1 743 1 chr4B.!!$R1 742
10 TraesCS1D01G034100 chr7B 362545739 362546484 745 False 1062.000000 1062 92.36900 1 747 1 chr7B.!!$F1 746
11 TraesCS1D01G034100 chr5B 635361920 635362661 741 True 1053.000000 1053 92.23600 4 750 1 chr5B.!!$R1 746

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
800 802 0.035343 TCACCACACACGGGTTTTGA 60.035 50.0 0.00 0.0 36.19 2.69 F
816 818 0.035820 TTGATTACACTGCCCGGTCC 60.036 55.0 0.00 0.0 0.00 4.46 F
2106 2171 0.033504 TTCTGCTGGTGTTCGTCTCC 59.966 55.0 0.00 0.0 0.00 3.71 F
2110 2175 0.033504 GCTGGTGTTCGTCTCCTGAA 59.966 55.0 10.39 0.0 32.75 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2087 2152 0.033504 GGAGACGAACACCAGCAGAA 59.966 55.0 0.00 0.0 0.00 3.02 R
2169 2234 0.684479 AGTCTGCAGCTACCGATGGA 60.684 55.0 9.47 0.0 0.00 3.41 R
3627 3787 0.598680 CATCGAACTCGGCATCCTCC 60.599 60.0 0.00 0.0 40.29 4.30 R
3798 3971 0.618981 ACCCGGTCCTTCAAGAATCC 59.381 55.0 0.00 0.0 0.00 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 84 4.326009 GCTTTACTTCTTCTCTTCTGCTCG 59.674 45.833 0.00 0.00 0.00 5.03
145 146 2.664568 CCATTGATTTGCTGCTTCAACG 59.335 45.455 12.86 7.26 32.61 4.10
310 312 4.293415 CAGCAAAACAAGCTTACTCCAAG 58.707 43.478 0.00 0.00 41.14 3.61
317 319 1.435256 AGCTTACTCCAAGTGGGTGT 58.565 50.000 0.00 0.00 45.12 4.16
347 349 2.168521 GGAGGCAGCAGTGTTGATAGTA 59.831 50.000 11.60 0.00 0.00 1.82
378 380 1.843851 AGGTGTCAAAGTGGAAGGTGA 59.156 47.619 0.00 0.00 0.00 4.02
409 411 1.608025 CGTCAGTTTGGGCTGAAGCTA 60.608 52.381 1.74 0.00 45.75 3.32
413 415 1.889170 AGTTTGGGCTGAAGCTAAAGC 59.111 47.619 11.26 11.26 41.70 3.51
430 432 4.978083 AAAGCATTTCATCATCTTCGCT 57.022 36.364 0.00 0.00 27.08 4.93
500 502 2.969821 TTGTGGGTAAGCTCACCAAT 57.030 45.000 8.72 0.00 45.29 3.16
566 568 1.503542 CTTGTCCATGTGCCGCTTC 59.496 57.895 0.00 0.00 0.00 3.86
699 701 1.497286 ACCAGGCTGGGTTGAAAAGTA 59.503 47.619 35.34 0.00 43.37 2.24
705 707 3.068165 GGCTGGGTTGAAAAGTATATGCC 59.932 47.826 0.00 0.00 0.00 4.40
748 750 0.251922 AACCAGACACGCCCCTAGTA 60.252 55.000 0.00 0.00 0.00 1.82
749 751 0.683504 ACCAGACACGCCCCTAGTAG 60.684 60.000 0.00 0.00 0.00 2.57
750 752 1.437986 CAGACACGCCCCTAGTAGC 59.562 63.158 0.00 0.00 0.00 3.58
751 753 1.038130 CAGACACGCCCCTAGTAGCT 61.038 60.000 0.00 0.00 0.00 3.32
752 754 0.752376 AGACACGCCCCTAGTAGCTC 60.752 60.000 0.00 0.00 0.00 4.09
753 755 0.752376 GACACGCCCCTAGTAGCTCT 60.752 60.000 0.00 0.00 0.00 4.09
754 756 0.324460 ACACGCCCCTAGTAGCTCTT 60.324 55.000 0.00 0.00 0.00 2.85
755 757 0.824759 CACGCCCCTAGTAGCTCTTT 59.175 55.000 0.00 0.00 0.00 2.52
756 758 2.029623 CACGCCCCTAGTAGCTCTTTA 58.970 52.381 0.00 0.00 0.00 1.85
757 759 2.030371 ACGCCCCTAGTAGCTCTTTAC 58.970 52.381 0.00 0.00 0.00 2.01
758 760 2.029623 CGCCCCTAGTAGCTCTTTACA 58.970 52.381 0.00 0.00 0.00 2.41
759 761 2.429610 CGCCCCTAGTAGCTCTTTACAA 59.570 50.000 0.00 0.00 0.00 2.41
760 762 3.118884 CGCCCCTAGTAGCTCTTTACAAA 60.119 47.826 0.00 0.00 0.00 2.83
761 763 4.622220 CGCCCCTAGTAGCTCTTTACAAAA 60.622 45.833 0.00 0.00 0.00 2.44
762 764 4.876679 GCCCCTAGTAGCTCTTTACAAAAG 59.123 45.833 0.00 0.00 0.00 2.27
763 765 5.338137 GCCCCTAGTAGCTCTTTACAAAAGA 60.338 44.000 0.00 2.39 0.00 2.52
764 766 6.342111 CCCCTAGTAGCTCTTTACAAAAGAG 58.658 44.000 20.16 20.16 44.95 2.85
765 767 6.154706 CCCCTAGTAGCTCTTTACAAAAGAGA 59.845 42.308 25.97 9.33 44.96 3.10
766 768 7.147637 CCCCTAGTAGCTCTTTACAAAAGAGAT 60.148 40.741 25.97 23.07 44.96 2.75
767 769 7.923878 CCCTAGTAGCTCTTTACAAAAGAGATC 59.076 40.741 25.97 16.22 44.96 2.75
768 770 8.470805 CCTAGTAGCTCTTTACAAAAGAGATCA 58.529 37.037 25.97 12.29 44.96 2.92
769 771 9.296400 CTAGTAGCTCTTTACAAAAGAGATCAC 57.704 37.037 25.97 19.41 44.96 3.06
770 772 7.902087 AGTAGCTCTTTACAAAAGAGATCACT 58.098 34.615 25.97 20.74 44.96 3.41
771 773 8.371699 AGTAGCTCTTTACAAAAGAGATCACTT 58.628 33.333 25.97 0.00 44.96 3.16
772 774 8.994170 GTAGCTCTTTACAAAAGAGATCACTTT 58.006 33.333 25.97 11.81 44.96 2.66
773 775 8.457238 AGCTCTTTACAAAAGAGATCACTTTT 57.543 30.769 25.97 20.89 46.57 2.27
774 776 8.907885 AGCTCTTTACAAAAGAGATCACTTTTT 58.092 29.630 25.97 17.45 44.33 1.94
792 794 4.349663 TTTTTCTCTTTCACCACACACG 57.650 40.909 0.00 0.00 0.00 4.49
793 795 1.948104 TTCTCTTTCACCACACACGG 58.052 50.000 0.00 0.00 0.00 4.94
794 796 0.105964 TCTCTTTCACCACACACGGG 59.894 55.000 0.00 0.00 0.00 5.28
795 797 0.179056 CTCTTTCACCACACACGGGT 60.179 55.000 0.00 0.00 39.88 5.28
796 798 0.253610 TCTTTCACCACACACGGGTT 59.746 50.000 0.00 0.00 36.19 4.11
797 799 1.099689 CTTTCACCACACACGGGTTT 58.900 50.000 0.00 0.00 36.19 3.27
798 800 1.474879 CTTTCACCACACACGGGTTTT 59.525 47.619 0.00 0.00 36.19 2.43
799 801 0.811915 TTCACCACACACGGGTTTTG 59.188 50.000 0.00 0.00 36.19 2.44
800 802 0.035343 TCACCACACACGGGTTTTGA 60.035 50.000 0.00 0.00 36.19 2.69
801 803 1.028905 CACCACACACGGGTTTTGAT 58.971 50.000 0.00 0.00 36.19 2.57
802 804 1.407258 CACCACACACGGGTTTTGATT 59.593 47.619 0.00 0.00 36.19 2.57
803 805 2.619177 CACCACACACGGGTTTTGATTA 59.381 45.455 0.00 0.00 36.19 1.75
804 806 2.619646 ACCACACACGGGTTTTGATTAC 59.380 45.455 0.00 0.00 34.10 1.89
805 807 2.619177 CCACACACGGGTTTTGATTACA 59.381 45.455 0.00 0.00 0.00 2.41
806 808 3.549221 CCACACACGGGTTTTGATTACAC 60.549 47.826 0.00 0.00 0.00 2.90
807 809 3.314080 CACACACGGGTTTTGATTACACT 59.686 43.478 0.00 0.00 0.00 3.55
808 810 3.314080 ACACACGGGTTTTGATTACACTG 59.686 43.478 0.00 0.00 0.00 3.66
809 811 2.292292 ACACGGGTTTTGATTACACTGC 59.708 45.455 0.00 0.00 0.00 4.40
810 812 1.883926 ACGGGTTTTGATTACACTGCC 59.116 47.619 0.00 0.00 0.00 4.85
811 813 1.201414 CGGGTTTTGATTACACTGCCC 59.799 52.381 0.00 0.00 0.00 5.36
812 814 1.201414 GGGTTTTGATTACACTGCCCG 59.799 52.381 0.00 0.00 0.00 6.13
813 815 1.201414 GGTTTTGATTACACTGCCCGG 59.799 52.381 0.00 0.00 0.00 5.73
814 816 1.883926 GTTTTGATTACACTGCCCGGT 59.116 47.619 0.00 0.00 0.00 5.28
815 817 1.816074 TTTGATTACACTGCCCGGTC 58.184 50.000 0.00 0.00 0.00 4.79
816 818 0.035820 TTGATTACACTGCCCGGTCC 60.036 55.000 0.00 0.00 0.00 4.46
817 819 1.153229 GATTACACTGCCCGGTCCC 60.153 63.158 0.00 0.00 0.00 4.46
818 820 1.906105 GATTACACTGCCCGGTCCCA 61.906 60.000 0.00 0.00 0.00 4.37
819 821 1.493854 ATTACACTGCCCGGTCCCAA 61.494 55.000 0.00 0.00 0.00 4.12
820 822 1.706995 TTACACTGCCCGGTCCCAAA 61.707 55.000 0.00 0.00 0.00 3.28
821 823 1.706995 TACACTGCCCGGTCCCAAAA 61.707 55.000 0.00 0.00 0.00 2.44
822 824 1.606313 CACTGCCCGGTCCCAAAAT 60.606 57.895 0.00 0.00 0.00 1.82
823 825 0.322997 CACTGCCCGGTCCCAAAATA 60.323 55.000 0.00 0.00 0.00 1.40
824 826 0.406361 ACTGCCCGGTCCCAAAATAA 59.594 50.000 0.00 0.00 0.00 1.40
825 827 1.102978 CTGCCCGGTCCCAAAATAAG 58.897 55.000 0.00 0.00 0.00 1.73
826 828 0.406361 TGCCCGGTCCCAAAATAAGT 59.594 50.000 0.00 0.00 0.00 2.24
827 829 0.815095 GCCCGGTCCCAAAATAAGTG 59.185 55.000 0.00 0.00 0.00 3.16
828 830 1.889262 GCCCGGTCCCAAAATAAGTGT 60.889 52.381 0.00 0.00 0.00 3.55
829 831 1.816224 CCCGGTCCCAAAATAAGTGTG 59.184 52.381 0.00 0.00 0.00 3.82
830 832 1.816224 CCGGTCCCAAAATAAGTGTGG 59.184 52.381 0.00 0.00 0.00 4.17
831 833 2.510613 CGGTCCCAAAATAAGTGTGGT 58.489 47.619 0.00 0.00 0.00 4.16
832 834 2.888414 CGGTCCCAAAATAAGTGTGGTT 59.112 45.455 0.00 0.00 0.00 3.67
833 835 3.305064 CGGTCCCAAAATAAGTGTGGTTG 60.305 47.826 0.00 0.00 0.00 3.77
834 836 3.892588 GGTCCCAAAATAAGTGTGGTTGA 59.107 43.478 0.00 0.00 0.00 3.18
835 837 4.526650 GGTCCCAAAATAAGTGTGGTTGAT 59.473 41.667 0.00 0.00 0.00 2.57
836 838 5.011635 GGTCCCAAAATAAGTGTGGTTGATT 59.988 40.000 0.00 0.00 0.00 2.57
837 839 6.463755 GGTCCCAAAATAAGTGTGGTTGATTT 60.464 38.462 0.00 0.00 0.00 2.17
838 840 7.256012 GGTCCCAAAATAAGTGTGGTTGATTTA 60.256 37.037 0.00 0.00 0.00 1.40
839 841 7.812669 GTCCCAAAATAAGTGTGGTTGATTTAG 59.187 37.037 0.00 0.00 0.00 1.85
840 842 7.507616 TCCCAAAATAAGTGTGGTTGATTTAGT 59.492 33.333 0.00 0.00 0.00 2.24
841 843 8.798402 CCCAAAATAAGTGTGGTTGATTTAGTA 58.202 33.333 0.00 0.00 0.00 1.82
874 876 2.163613 CACAGAGGGGCCGTAAAAATTC 59.836 50.000 0.00 0.00 0.00 2.17
985 1002 1.084084 AAACCCTAGCCTAGCCCCA 59.916 57.895 0.00 0.00 0.00 4.96
988 1005 3.234730 CCTAGCCTAGCCCCACCG 61.235 72.222 0.00 0.00 0.00 4.94
1008 1030 3.832237 ATCGCCGGCCATGGATGAC 62.832 63.158 23.46 0.00 0.00 3.06
1306 1334 1.658673 GACACCTTCGTCACCGACT 59.341 57.895 0.00 0.00 44.13 4.18
1381 1410 2.028420 TCACATGCCCATTTCTCTCG 57.972 50.000 0.00 0.00 0.00 4.04
1460 1511 7.540745 CGAACAGTTCCTGGTAAATTAAAATGG 59.459 37.037 7.76 0.00 35.51 3.16
1468 1519 9.131791 TCCTGGTAAATTAAAATGGATAGAAGC 57.868 33.333 0.00 0.00 0.00 3.86
1583 1637 7.812669 GGTAACCTAACAAAATTGGATGAAGTG 59.187 37.037 0.00 0.00 0.00 3.16
1621 1675 1.335233 CGCAGATTGCTTGCAAGTTGA 60.335 47.619 26.55 13.62 42.25 3.18
1641 1695 4.488879 TGAAACAGATCACATGAGTCTCG 58.511 43.478 0.00 0.00 0.00 4.04
1664 1719 2.726760 GTGCTAGTCTTTGTGTGACTCG 59.273 50.000 0.00 0.00 42.95 4.18
1692 1747 4.268884 GCCTTGCTAAATTCTGTCTACTCG 59.731 45.833 0.00 0.00 0.00 4.18
1806 1866 6.139671 TGTTCCCTCTAATCTCAGCTAAGAT 58.860 40.000 0.00 0.00 37.61 2.40
1808 1868 5.007034 TCCCTCTAATCTCAGCTAAGATCG 58.993 45.833 0.00 0.00 34.90 3.69
1837 1902 1.143073 GGGACTGAATGGGGGTATCAC 59.857 57.143 0.00 0.00 0.00 3.06
1844 1909 2.190398 ATGGGGGTATCACTGTGCTA 57.810 50.000 2.12 0.00 0.00 3.49
1856 1921 8.314751 GGTATCACTGTGCTACTTGGATATAAT 58.685 37.037 18.08 0.00 0.00 1.28
1996 2061 6.987403 AAAAGGCCTGTAGAAAACCAAATA 57.013 33.333 5.69 0.00 0.00 1.40
2016 2081 5.862924 ATAATCACTTTGACGGTTGAGTG 57.137 39.130 11.08 11.08 40.56 3.51
2060 2125 8.802267 AGATAAAGATGTAGATTAGCTCTGTCC 58.198 37.037 0.00 0.00 35.28 4.02
2061 2126 8.719645 ATAAAGATGTAGATTAGCTCTGTCCT 57.280 34.615 0.00 0.00 35.28 3.85
2062 2127 6.403866 AAGATGTAGATTAGCTCTGTCCTG 57.596 41.667 0.00 0.00 35.28 3.86
2063 2128 5.700183 AGATGTAGATTAGCTCTGTCCTGA 58.300 41.667 0.00 0.00 35.28 3.86
2064 2129 6.314120 AGATGTAGATTAGCTCTGTCCTGAT 58.686 40.000 0.00 0.00 35.28 2.90
2065 2130 6.782000 AGATGTAGATTAGCTCTGTCCTGATT 59.218 38.462 0.00 0.00 35.28 2.57
2066 2131 6.154203 TGTAGATTAGCTCTGTCCTGATTG 57.846 41.667 0.00 0.00 35.28 2.67
2067 2132 5.893824 TGTAGATTAGCTCTGTCCTGATTGA 59.106 40.000 0.00 0.00 35.28 2.57
2068 2133 5.534207 AGATTAGCTCTGTCCTGATTGAG 57.466 43.478 0.00 0.00 31.12 3.02
2069 2134 4.961730 AGATTAGCTCTGTCCTGATTGAGT 59.038 41.667 0.00 0.00 31.12 3.41
2070 2135 4.462508 TTAGCTCTGTCCTGATTGAGTG 57.537 45.455 0.00 0.00 0.00 3.51
2071 2136 1.554160 AGCTCTGTCCTGATTGAGTGG 59.446 52.381 0.00 0.00 0.00 4.00
2072 2137 2.011046 GCTCTGTCCTGATTGAGTGGC 61.011 57.143 0.00 0.00 0.00 5.01
2073 2138 1.554160 CTCTGTCCTGATTGAGTGGCT 59.446 52.381 0.00 0.00 0.00 4.75
2074 2139 1.980765 TCTGTCCTGATTGAGTGGCTT 59.019 47.619 0.00 0.00 0.00 4.35
2075 2140 2.027745 TCTGTCCTGATTGAGTGGCTTC 60.028 50.000 0.00 0.00 0.00 3.86
2076 2141 1.980765 TGTCCTGATTGAGTGGCTTCT 59.019 47.619 0.00 0.00 0.00 2.85
2077 2142 3.173151 TGTCCTGATTGAGTGGCTTCTA 58.827 45.455 0.00 0.00 0.00 2.10
2078 2143 3.776969 TGTCCTGATTGAGTGGCTTCTAT 59.223 43.478 0.00 0.00 0.00 1.98
2079 2144 4.125703 GTCCTGATTGAGTGGCTTCTATG 58.874 47.826 0.00 0.00 0.00 2.23
2080 2145 3.776969 TCCTGATTGAGTGGCTTCTATGT 59.223 43.478 0.00 0.00 0.00 2.29
2081 2146 3.875727 CCTGATTGAGTGGCTTCTATGTG 59.124 47.826 0.00 0.00 0.00 3.21
2082 2147 4.511527 CTGATTGAGTGGCTTCTATGTGT 58.488 43.478 0.00 0.00 0.00 3.72
2083 2148 4.910195 TGATTGAGTGGCTTCTATGTGTT 58.090 39.130 0.00 0.00 0.00 3.32
2084 2149 5.316167 TGATTGAGTGGCTTCTATGTGTTT 58.684 37.500 0.00 0.00 0.00 2.83
2085 2150 5.769662 TGATTGAGTGGCTTCTATGTGTTTT 59.230 36.000 0.00 0.00 0.00 2.43
2086 2151 5.689383 TTGAGTGGCTTCTATGTGTTTTC 57.311 39.130 0.00 0.00 0.00 2.29
2087 2152 4.973168 TGAGTGGCTTCTATGTGTTTTCT 58.027 39.130 0.00 0.00 0.00 2.52
2088 2153 5.376625 TGAGTGGCTTCTATGTGTTTTCTT 58.623 37.500 0.00 0.00 0.00 2.52
2089 2154 5.470098 TGAGTGGCTTCTATGTGTTTTCTTC 59.530 40.000 0.00 0.00 0.00 2.87
2090 2155 5.625150 AGTGGCTTCTATGTGTTTTCTTCT 58.375 37.500 0.00 0.00 0.00 2.85
2091 2156 5.471456 AGTGGCTTCTATGTGTTTTCTTCTG 59.529 40.000 0.00 0.00 0.00 3.02
2092 2157 4.216257 TGGCTTCTATGTGTTTTCTTCTGC 59.784 41.667 0.00 0.00 0.00 4.26
2093 2158 4.457257 GGCTTCTATGTGTTTTCTTCTGCT 59.543 41.667 0.00 0.00 0.00 4.24
2094 2159 5.388944 GCTTCTATGTGTTTTCTTCTGCTG 58.611 41.667 0.00 0.00 0.00 4.41
2095 2160 5.618640 GCTTCTATGTGTTTTCTTCTGCTGG 60.619 44.000 0.00 0.00 0.00 4.85
2096 2161 4.973168 TCTATGTGTTTTCTTCTGCTGGT 58.027 39.130 0.00 0.00 0.00 4.00
2097 2162 3.996150 ATGTGTTTTCTTCTGCTGGTG 57.004 42.857 0.00 0.00 0.00 4.17
2098 2163 2.722094 TGTGTTTTCTTCTGCTGGTGT 58.278 42.857 0.00 0.00 0.00 4.16
2099 2164 3.088532 TGTGTTTTCTTCTGCTGGTGTT 58.911 40.909 0.00 0.00 0.00 3.32
2100 2165 3.128589 TGTGTTTTCTTCTGCTGGTGTTC 59.871 43.478 0.00 0.00 0.00 3.18
2101 2166 2.354510 TGTTTTCTTCTGCTGGTGTTCG 59.645 45.455 0.00 0.00 0.00 3.95
2102 2167 2.325583 TTTCTTCTGCTGGTGTTCGT 57.674 45.000 0.00 0.00 0.00 3.85
2103 2168 1.865865 TTCTTCTGCTGGTGTTCGTC 58.134 50.000 0.00 0.00 0.00 4.20
2104 2169 1.040646 TCTTCTGCTGGTGTTCGTCT 58.959 50.000 0.00 0.00 0.00 4.18
2105 2170 1.000163 TCTTCTGCTGGTGTTCGTCTC 60.000 52.381 0.00 0.00 0.00 3.36
2106 2171 0.033504 TTCTGCTGGTGTTCGTCTCC 59.966 55.000 0.00 0.00 0.00 3.71
2107 2172 0.827925 TCTGCTGGTGTTCGTCTCCT 60.828 55.000 0.00 0.00 0.00 3.69
2108 2173 0.668706 CTGCTGGTGTTCGTCTCCTG 60.669 60.000 0.00 0.00 33.68 3.86
2109 2174 1.112916 TGCTGGTGTTCGTCTCCTGA 61.113 55.000 10.39 0.00 32.75 3.86
2110 2175 0.033504 GCTGGTGTTCGTCTCCTGAA 59.966 55.000 10.39 0.00 32.75 3.02
2172 2237 3.091545 GGCATTTCTGACAATCCTTCCA 58.908 45.455 0.00 0.00 0.00 3.53
2207 2273 6.098679 CAGACTTCTCTGTTAATCTCCAGTG 58.901 44.000 0.00 0.00 39.43 3.66
2211 2277 6.948886 ACTTCTCTGTTAATCTCCAGTGACTA 59.051 38.462 0.00 0.00 32.65 2.59
2213 2279 7.575414 TCTCTGTTAATCTCCAGTGACTATC 57.425 40.000 0.00 0.00 0.00 2.08
2215 2281 7.500892 TCTCTGTTAATCTCCAGTGACTATCTC 59.499 40.741 0.00 0.00 0.00 2.75
2310 2376 5.146482 CAACCTTGCAAACTTTCACATTG 57.854 39.130 0.00 0.00 0.00 2.82
2333 2399 5.357878 TGTTATCCAACAAGCCATCAGAATC 59.642 40.000 0.00 0.00 41.69 2.52
2338 2404 4.461781 CCAACAAGCCATCAGAATCTTTCT 59.538 41.667 0.00 0.00 41.70 2.52
2371 2437 8.656849 ACTCATGTACTTAATGATGAACGTTTC 58.343 33.333 0.46 0.00 33.69 2.78
2386 2452 0.740737 GTTTCAGTGTGCCTGCACTT 59.259 50.000 21.62 8.62 46.45 3.16
2406 2474 8.339714 TGCACTTTTCATGTAGTTAACTTACAC 58.660 33.333 14.49 6.75 0.00 2.90
2443 2511 5.266733 CCACCTGGGTTCAAATCATTATG 57.733 43.478 0.00 0.00 0.00 1.90
2482 2550 4.910458 ATTTACTACACTGTTGGAGCCT 57.090 40.909 0.00 0.00 37.14 4.58
2485 2553 1.270907 CTACACTGTTGGAGCCTCCT 58.729 55.000 12.94 0.00 37.46 3.69
2492 2560 2.503356 CTGTTGGAGCCTCCTCTACAAT 59.497 50.000 12.94 0.00 37.46 2.71
2500 2568 5.279758 GGAGCCTCCTCTACAATATTTCCTC 60.280 48.000 2.64 0.00 38.21 3.71
2501 2569 5.219739 AGCCTCCTCTACAATATTTCCTCA 58.780 41.667 0.00 0.00 0.00 3.86
2566 2635 7.606456 CAGTTACCACTGGTACAAATCTGTATT 59.394 37.037 7.49 0.00 46.10 1.89
2571 2640 6.260377 CACTGGTACAAATCTGTATTGCATG 58.740 40.000 0.00 0.00 40.16 4.06
2673 2745 4.141711 TGCAACTGTTATATCCCCTCACTC 60.142 45.833 0.00 0.00 0.00 3.51
2720 2792 4.060038 ACTCCATATTCGTGTGACCATC 57.940 45.455 0.00 0.00 0.00 3.51
2806 2878 8.674263 TTTTGGTGCATTGAAATAAACTGATT 57.326 26.923 0.00 0.00 0.00 2.57
2814 2894 7.276438 GCATTGAAATAAACTGATTCCACTTCC 59.724 37.037 0.00 0.00 0.00 3.46
2819 2899 2.751166 ACTGATTCCACTTCCTGACG 57.249 50.000 0.00 0.00 0.00 4.35
2834 2914 0.389296 TGACGACCTAACACATGGCG 60.389 55.000 0.00 0.00 0.00 5.69
2849 2992 2.022764 TGGCGGTATCAAGTCATGTG 57.977 50.000 0.00 0.00 0.00 3.21
2851 2994 0.657840 GCGGTATCAAGTCATGTGGC 59.342 55.000 0.00 0.00 0.00 5.01
2857 3000 5.622007 CGGTATCAAGTCATGTGGCATTTTT 60.622 40.000 0.00 0.00 0.00 1.94
2858 3001 5.577945 GGTATCAAGTCATGTGGCATTTTTG 59.422 40.000 0.00 0.00 0.00 2.44
2861 3004 5.426504 TCAAGTCATGTGGCATTTTTGTTT 58.573 33.333 0.00 0.00 0.00 2.83
2862 3005 6.577103 TCAAGTCATGTGGCATTTTTGTTTA 58.423 32.000 0.00 0.00 0.00 2.01
2863 3006 6.700960 TCAAGTCATGTGGCATTTTTGTTTAG 59.299 34.615 0.00 0.00 0.00 1.85
2865 3008 6.815089 AGTCATGTGGCATTTTTGTTTAGAA 58.185 32.000 0.00 0.00 0.00 2.10
2866 3009 6.701400 AGTCATGTGGCATTTTTGTTTAGAAC 59.299 34.615 0.00 0.00 0.00 3.01
2897 3057 8.208224 TGTGACTGGAGTTAGACTTATTTGAAA 58.792 33.333 0.00 0.00 0.00 2.69
2898 3058 8.713271 GTGACTGGAGTTAGACTTATTTGAAAG 58.287 37.037 0.00 0.00 0.00 2.62
2899 3059 8.429641 TGACTGGAGTTAGACTTATTTGAAAGT 58.570 33.333 0.00 0.00 42.36 2.66
3013 3173 0.247185 AAGCATGATTGGGTTTGGCG 59.753 50.000 0.00 0.00 0.00 5.69
3094 3254 1.417517 TGAAGAGCCTTCAACTCAGCA 59.582 47.619 13.26 0.00 36.58 4.41
3139 3299 3.890313 TGGCAGAGGCAGTCAAGA 58.110 55.556 0.00 0.00 43.71 3.02
3180 3340 2.836262 CTGGAGATCACATTCTGCTCC 58.164 52.381 0.00 0.00 44.18 4.70
3459 3619 0.106819 GCTGCAACCTCCAGATGGAT 60.107 55.000 1.15 0.00 44.46 3.41
3466 3626 1.065647 CCTCCAGATGGATGATGCCT 58.934 55.000 1.15 0.00 44.46 4.75
3520 3680 4.356561 TTCCCCGGGACCCCATCA 62.357 66.667 26.32 0.00 35.37 3.07
3627 3787 2.126965 GACGTGGTCACCGACGAG 60.127 66.667 21.08 0.00 38.94 4.18
3653 3816 1.766143 GCCGAGTTCGATGACATGGC 61.766 60.000 2.59 0.00 43.02 4.40
3669 3832 3.258372 ACATGGCTGATTATATCGACGGT 59.742 43.478 0.00 0.00 0.00 4.83
3708 3871 3.857665 ACATGTATGATGACGTGTTCGAC 59.142 43.478 0.00 0.00 45.25 4.20
3737 3905 2.665603 GAGCTGTGACCAGGACCC 59.334 66.667 0.00 0.00 39.22 4.46
3751 3919 4.309950 ACCCGGGTTCTCACGTGC 62.310 66.667 24.16 0.00 39.02 5.34
3787 3959 3.780925 GCTGAAGCAATGTGGTGTC 57.219 52.632 0.00 0.00 41.59 3.67
3798 3971 2.613026 TGTGGTGTCTACTGTGTTGG 57.387 50.000 0.00 0.00 0.00 3.77
3810 3983 3.490348 ACTGTGTTGGGATTCTTGAAGG 58.510 45.455 0.00 0.00 0.00 3.46
3811 3984 3.138283 ACTGTGTTGGGATTCTTGAAGGA 59.862 43.478 0.00 0.00 0.00 3.36
3812 3985 3.486383 TGTGTTGGGATTCTTGAAGGAC 58.514 45.455 0.00 0.00 0.00 3.85
3813 3986 2.820197 GTGTTGGGATTCTTGAAGGACC 59.180 50.000 0.00 0.00 0.00 4.46
3836 4009 2.412325 GGTTCACGCACTTTGTTATCGG 60.412 50.000 0.00 0.00 0.00 4.18
3839 4012 2.029739 TCACGCACTTTGTTATCGGAGA 60.030 45.455 0.00 0.00 45.75 3.71
3841 4014 3.370978 CACGCACTTTGTTATCGGAGATT 59.629 43.478 0.00 0.00 45.12 2.40
3863 4036 8.338259 AGATTGATTCTCGTATTATGTTTGTGC 58.662 33.333 0.00 0.00 0.00 4.57
3868 4041 4.161565 TCTCGTATTATGTTTGTGCCTCCT 59.838 41.667 0.00 0.00 0.00 3.69
3883 4056 5.070714 TGTGCCTCCTGTTTGTTAACTAGTA 59.929 40.000 7.22 0.00 35.24 1.82
3891 4064 9.750783 TCCTGTTTGTTAACTAGTATACTCTCT 57.249 33.333 9.12 0.00 35.24 3.10
3894 4067 9.635520 TGTTTGTTAACTAGTATACTCTCTTGC 57.364 33.333 9.12 0.00 35.24 4.01
3895 4068 9.857957 GTTTGTTAACTAGTATACTCTCTTGCT 57.142 33.333 9.12 0.00 0.00 3.91
3896 4069 9.856488 TTTGTTAACTAGTATACTCTCTTGCTG 57.144 33.333 9.12 0.00 0.00 4.41
3897 4070 8.577048 TGTTAACTAGTATACTCTCTTGCTGT 57.423 34.615 9.12 0.00 0.00 4.40
3898 4071 8.459635 TGTTAACTAGTATACTCTCTTGCTGTG 58.540 37.037 9.12 0.00 0.00 3.66
3899 4072 8.460428 GTTAACTAGTATACTCTCTTGCTGTGT 58.540 37.037 9.12 0.00 0.00 3.72
3900 4073 6.443934 ACTAGTATACTCTCTTGCTGTGTG 57.556 41.667 9.12 0.00 0.00 3.82
3901 4074 4.116747 AGTATACTCTCTTGCTGTGTGC 57.883 45.455 0.00 0.00 43.25 4.57
3902 4075 2.393271 ATACTCTCTTGCTGTGTGCC 57.607 50.000 0.00 0.00 42.00 5.01
3903 4076 1.342074 TACTCTCTTGCTGTGTGCCT 58.658 50.000 0.00 0.00 42.00 4.75
3904 4077 0.034616 ACTCTCTTGCTGTGTGCCTC 59.965 55.000 0.00 0.00 42.00 4.70
3905 4078 0.673022 CTCTCTTGCTGTGTGCCTCC 60.673 60.000 0.00 0.00 42.00 4.30
3906 4079 1.123861 TCTCTTGCTGTGTGCCTCCT 61.124 55.000 0.00 0.00 42.00 3.69
3907 4080 0.954449 CTCTTGCTGTGTGCCTCCTG 60.954 60.000 0.00 0.00 42.00 3.86
3908 4081 1.228063 CTTGCTGTGTGCCTCCTGT 60.228 57.895 0.00 0.00 42.00 4.00
3909 4082 0.820891 CTTGCTGTGTGCCTCCTGTT 60.821 55.000 0.00 0.00 42.00 3.16
3910 4083 0.395586 TTGCTGTGTGCCTCCTGTTT 60.396 50.000 0.00 0.00 42.00 2.83
3911 4084 1.102809 TGCTGTGTGCCTCCTGTTTG 61.103 55.000 0.00 0.00 42.00 2.93
3912 4085 1.103398 GCTGTGTGCCTCCTGTTTGT 61.103 55.000 0.00 0.00 35.15 2.83
3913 4086 1.392589 CTGTGTGCCTCCTGTTTGTT 58.607 50.000 0.00 0.00 0.00 2.83
3914 4087 2.571212 CTGTGTGCCTCCTGTTTGTTA 58.429 47.619 0.00 0.00 0.00 2.41
3915 4088 2.948979 CTGTGTGCCTCCTGTTTGTTAA 59.051 45.455 0.00 0.00 0.00 2.01
3916 4089 2.685897 TGTGTGCCTCCTGTTTGTTAAC 59.314 45.455 0.00 0.00 34.75 2.01
3917 4090 2.949644 GTGTGCCTCCTGTTTGTTAACT 59.050 45.455 7.22 0.00 35.24 2.24
3918 4091 4.131596 GTGTGCCTCCTGTTTGTTAACTA 58.868 43.478 7.22 0.00 35.24 2.24
3919 4092 4.213482 GTGTGCCTCCTGTTTGTTAACTAG 59.787 45.833 7.22 0.00 35.24 2.57
3920 4093 4.141574 TGTGCCTCCTGTTTGTTAACTAGT 60.142 41.667 7.22 0.00 35.24 2.57
3921 4094 5.070714 TGTGCCTCCTGTTTGTTAACTAGTA 59.929 40.000 7.22 0.00 35.24 1.82
3939 4112 7.090953 ACTAGTATACTCTCTTGCTGTGAAC 57.909 40.000 9.12 0.00 0.00 3.18
3940 4113 4.987832 AGTATACTCTCTTGCTGTGAACG 58.012 43.478 0.00 0.00 0.00 3.95
3946 4120 0.759959 TCTTGCTGTGAACGGGGTTA 59.240 50.000 0.00 0.00 0.00 2.85
3948 4122 0.470766 TTGCTGTGAACGGGGTTAGT 59.529 50.000 0.00 0.00 0.00 2.24
3951 4125 1.534163 GCTGTGAACGGGGTTAGTTTC 59.466 52.381 0.00 0.00 31.14 2.78
3952 4126 1.796459 CTGTGAACGGGGTTAGTTTCG 59.204 52.381 0.00 0.00 31.14 3.46
3975 4150 5.050769 CGTCTCTGCGATTGTAATTTATGCT 60.051 40.000 0.00 0.00 0.00 3.79
4054 4230 7.197071 TGTTATGTTGTGTTAGGTTGATGAC 57.803 36.000 0.00 0.00 0.00 3.06
4071 4247 2.033448 CGCCCTAGTGTTTGCCCA 59.967 61.111 0.00 0.00 0.00 5.36
4072 4248 1.602323 CGCCCTAGTGTTTGCCCAA 60.602 57.895 0.00 0.00 0.00 4.12
4073 4249 1.862602 CGCCCTAGTGTTTGCCCAAC 61.863 60.000 0.00 0.00 35.71 3.77
4074 4250 0.825840 GCCCTAGTGTTTGCCCAACA 60.826 55.000 0.00 0.00 43.55 3.33
4119 4893 5.454045 GGAAGATGGGAATCTAGACTTGGAC 60.454 48.000 0.00 0.00 0.00 4.02
4127 4901 5.280011 GGAATCTAGACTTGGACAAACAGGA 60.280 44.000 0.00 0.00 0.00 3.86
4128 4902 5.825593 ATCTAGACTTGGACAAACAGGAA 57.174 39.130 0.00 0.00 0.00 3.36
4129 4903 5.215252 TCTAGACTTGGACAAACAGGAAG 57.785 43.478 0.00 0.00 0.00 3.46
4130 4904 4.899457 TCTAGACTTGGACAAACAGGAAGA 59.101 41.667 0.00 0.00 0.00 2.87
4131 4905 4.078639 AGACTTGGACAAACAGGAAGAG 57.921 45.455 0.00 0.00 0.00 2.85
4132 4906 3.456277 AGACTTGGACAAACAGGAAGAGT 59.544 43.478 0.00 0.00 0.00 3.24
4133 4907 3.809905 ACTTGGACAAACAGGAAGAGTC 58.190 45.455 0.00 0.00 0.00 3.36
4135 4909 4.141390 ACTTGGACAAACAGGAAGAGTCAT 60.141 41.667 0.00 0.00 0.00 3.06
4136 4910 4.437682 TGGACAAACAGGAAGAGTCATT 57.562 40.909 0.00 0.00 0.00 2.57
4137 4911 4.136796 TGGACAAACAGGAAGAGTCATTG 58.863 43.478 0.00 0.00 0.00 2.82
4138 4912 3.503748 GGACAAACAGGAAGAGTCATTGG 59.496 47.826 0.00 0.00 0.00 3.16
4140 4914 3.117512 ACAAACAGGAAGAGTCATTGGGT 60.118 43.478 0.00 0.00 0.00 4.51
4143 4917 2.982488 ACAGGAAGAGTCATTGGGTTCT 59.018 45.455 0.00 0.00 0.00 3.01
4144 4918 3.008485 ACAGGAAGAGTCATTGGGTTCTC 59.992 47.826 0.00 0.00 0.00 2.87
4145 4919 2.573915 AGGAAGAGTCATTGGGTTCTCC 59.426 50.000 0.00 0.00 0.00 3.71
4146 4920 2.305927 GGAAGAGTCATTGGGTTCTCCA 59.694 50.000 0.00 0.00 45.43 3.86
4154 4928 3.963733 TGGGTTCTCCAAGATGCAG 57.036 52.632 0.00 0.00 43.84 4.41
4155 4929 1.361204 TGGGTTCTCCAAGATGCAGA 58.639 50.000 0.00 0.00 43.84 4.26
4156 4930 1.280133 TGGGTTCTCCAAGATGCAGAG 59.720 52.381 0.00 0.00 43.84 3.35
4157 4931 1.556911 GGGTTCTCCAAGATGCAGAGA 59.443 52.381 0.00 0.00 34.90 3.10
4158 4932 2.172293 GGGTTCTCCAAGATGCAGAGAT 59.828 50.000 3.69 0.00 36.57 2.75
4159 4933 3.204526 GGTTCTCCAAGATGCAGAGATG 58.795 50.000 3.69 0.00 36.57 2.90
4160 4934 2.613133 GTTCTCCAAGATGCAGAGATGC 59.387 50.000 3.69 0.00 36.57 3.91
4161 4935 2.117051 TCTCCAAGATGCAGAGATGCT 58.883 47.619 1.53 0.00 31.80 3.79
4162 4936 3.303049 TCTCCAAGATGCAGAGATGCTA 58.697 45.455 1.53 0.00 31.80 3.49
4163 4937 3.069300 TCTCCAAGATGCAGAGATGCTAC 59.931 47.826 1.53 0.00 31.80 3.58
4164 4938 2.767960 TCCAAGATGCAGAGATGCTACA 59.232 45.455 1.53 0.00 35.49 2.74
4165 4939 3.132160 CCAAGATGCAGAGATGCTACAG 58.868 50.000 1.53 0.00 35.49 2.74
4166 4940 3.181468 CCAAGATGCAGAGATGCTACAGA 60.181 47.826 1.53 0.00 35.49 3.41
4167 4941 4.439968 CAAGATGCAGAGATGCTACAGAA 58.560 43.478 1.53 0.00 35.49 3.02
4168 4942 4.057406 AGATGCAGAGATGCTACAGAAC 57.943 45.455 1.53 0.00 35.49 3.01
4169 4943 3.705579 AGATGCAGAGATGCTACAGAACT 59.294 43.478 1.53 0.00 35.49 3.01
4170 4944 4.892345 AGATGCAGAGATGCTACAGAACTA 59.108 41.667 1.53 0.00 35.49 2.24
4171 4945 5.539574 AGATGCAGAGATGCTACAGAACTAT 59.460 40.000 1.53 0.00 35.49 2.12
4172 4946 4.941657 TGCAGAGATGCTACAGAACTATG 58.058 43.478 1.53 0.00 35.49 2.23
4173 4947 4.202192 TGCAGAGATGCTACAGAACTATGG 60.202 45.833 1.53 0.00 35.49 2.74
4174 4948 4.202202 GCAGAGATGCTACAGAACTATGGT 60.202 45.833 0.00 0.00 0.00 3.55
4175 4949 5.683509 GCAGAGATGCTACAGAACTATGGTT 60.684 44.000 0.00 0.00 38.52 3.67
4176 4950 9.715774 TGCAGAGATGCTACAGAACTATGGTTC 62.716 44.444 13.69 13.69 42.32 3.62
4191 4965 7.496346 ACTATGGTTCATTTCTAAGAGACCA 57.504 36.000 0.00 0.00 0.00 4.02
4192 4966 8.095452 ACTATGGTTCATTTCTAAGAGACCAT 57.905 34.615 9.70 9.70 38.72 3.55
4193 4967 7.989741 ACTATGGTTCATTTCTAAGAGACCATG 59.010 37.037 13.69 7.56 36.85 3.66
4194 4968 4.943705 TGGTTCATTTCTAAGAGACCATGC 59.056 41.667 0.00 0.00 0.00 4.06
4195 4969 4.336713 GGTTCATTTCTAAGAGACCATGCC 59.663 45.833 0.00 0.00 0.00 4.40
4196 4970 4.842531 TCATTTCTAAGAGACCATGCCA 57.157 40.909 0.00 0.00 0.00 4.92
4197 4971 5.378230 TCATTTCTAAGAGACCATGCCAT 57.622 39.130 0.00 0.00 0.00 4.40
4198 4972 6.499106 TCATTTCTAAGAGACCATGCCATA 57.501 37.500 0.00 0.00 0.00 2.74
4199 4973 6.291377 TCATTTCTAAGAGACCATGCCATAC 58.709 40.000 0.00 0.00 0.00 2.39
4200 4974 5.692115 TTTCTAAGAGACCATGCCATACA 57.308 39.130 0.00 0.00 0.00 2.29
4201 4975 5.894298 TTCTAAGAGACCATGCCATACAT 57.106 39.130 0.00 0.00 40.66 2.29
4202 4976 6.994421 TTCTAAGAGACCATGCCATACATA 57.006 37.500 0.00 0.00 36.64 2.29
4203 4977 7.559335 TTCTAAGAGACCATGCCATACATAT 57.441 36.000 0.00 0.00 36.64 1.78
4204 4978 6.939622 TCTAAGAGACCATGCCATACATATG 58.060 40.000 0.00 0.00 36.64 1.78
4205 4979 5.573380 AAGAGACCATGCCATACATATGT 57.427 39.130 13.93 13.93 36.64 2.29
4206 4980 6.686484 AAGAGACCATGCCATACATATGTA 57.314 37.500 17.65 17.65 36.64 2.29
4207 4981 6.291648 AGAGACCATGCCATACATATGTAG 57.708 41.667 19.80 9.31 36.64 2.74
4208 4982 4.836825 AGACCATGCCATACATATGTAGC 58.163 43.478 19.80 17.94 36.64 3.58
4209 4983 4.533707 AGACCATGCCATACATATGTAGCT 59.466 41.667 19.80 2.61 36.64 3.32
4210 4984 4.836825 ACCATGCCATACATATGTAGCTC 58.163 43.478 19.80 11.49 36.64 4.09
4211 4985 4.286808 ACCATGCCATACATATGTAGCTCA 59.713 41.667 19.80 15.86 36.64 4.26
4212 4986 4.874396 CCATGCCATACATATGTAGCTCAG 59.126 45.833 19.80 12.01 36.64 3.35
4213 4987 5.485620 CATGCCATACATATGTAGCTCAGT 58.514 41.667 19.80 0.46 36.64 3.41
4214 4988 4.886579 TGCCATACATATGTAGCTCAGTG 58.113 43.478 19.80 12.06 33.52 3.66
4215 4989 4.344968 TGCCATACATATGTAGCTCAGTGT 59.655 41.667 19.80 0.00 33.52 3.55
4216 4990 4.687948 GCCATACATATGTAGCTCAGTGTG 59.312 45.833 19.80 10.80 33.52 3.82
4217 4991 5.509670 GCCATACATATGTAGCTCAGTGTGA 60.510 44.000 19.80 0.00 33.52 3.58
4218 4992 6.695429 CCATACATATGTAGCTCAGTGTGAT 58.305 40.000 19.80 0.00 33.52 3.06
4219 4993 6.589139 CCATACATATGTAGCTCAGTGTGATG 59.411 42.308 19.80 9.97 33.52 3.07
4227 5001 6.930731 TGTAGCTCAGTGTGATGTTTATACA 58.069 36.000 0.00 0.00 38.95 2.29
4259 5033 5.130705 AGATTCAAACCCTAAATCCTCCC 57.869 43.478 0.00 0.00 31.21 4.30
4263 5037 6.410222 TTCAAACCCTAAATCCTCCCAATA 57.590 37.500 0.00 0.00 0.00 1.90
4265 5039 6.806217 TCAAACCCTAAATCCTCCCAATAAA 58.194 36.000 0.00 0.00 0.00 1.40
4268 5042 6.865651 ACCCTAAATCCTCCCAATAAATCT 57.134 37.500 0.00 0.00 0.00 2.40
4269 5043 6.614657 ACCCTAAATCCTCCCAATAAATCTG 58.385 40.000 0.00 0.00 0.00 2.90
4273 5047 6.796785 AAATCCTCCCAATAAATCTGGTTG 57.203 37.500 0.00 0.00 31.45 3.77
4296 5113 1.265635 CATTCGCTGAAACCGAAACCA 59.734 47.619 0.21 0.00 46.20 3.67
4298 5115 0.105224 TCGCTGAAACCGAAACCAGA 59.895 50.000 0.00 0.00 0.00 3.86
4299 5116 0.234884 CGCTGAAACCGAAACCAGAC 59.765 55.000 0.00 0.00 0.00 3.51
4301 5118 1.880027 GCTGAAACCGAAACCAGACAT 59.120 47.619 0.00 0.00 0.00 3.06
4302 5119 2.095718 GCTGAAACCGAAACCAGACATC 60.096 50.000 0.00 0.00 0.00 3.06
4303 5120 3.403038 CTGAAACCGAAACCAGACATCT 58.597 45.455 0.00 0.00 0.00 2.90
4308 5125 4.830826 ACCGAAACCAGACATCTTTTTC 57.169 40.909 0.00 3.89 0.00 2.29
4309 5126 4.204012 ACCGAAACCAGACATCTTTTTCA 58.796 39.130 10.98 0.00 30.91 2.69
4310 5127 4.642885 ACCGAAACCAGACATCTTTTTCAA 59.357 37.500 10.98 0.00 30.91 2.69
4311 5128 5.301805 ACCGAAACCAGACATCTTTTTCAAT 59.698 36.000 10.98 0.15 30.91 2.57
4313 5130 6.144402 CCGAAACCAGACATCTTTTTCAATTG 59.856 38.462 0.00 0.00 30.91 2.32
4314 5131 6.144402 CGAAACCAGACATCTTTTTCAATTGG 59.856 38.462 5.42 0.00 30.91 3.16
4315 5132 4.886579 ACCAGACATCTTTTTCAATTGGC 58.113 39.130 5.42 0.00 0.00 4.52
4316 5133 3.922240 CCAGACATCTTTTTCAATTGGCG 59.078 43.478 5.42 0.00 0.00 5.69
4317 5134 3.365820 CAGACATCTTTTTCAATTGGCGC 59.634 43.478 5.42 0.00 0.00 6.53
4318 5135 3.005684 AGACATCTTTTTCAATTGGCGCA 59.994 39.130 10.83 0.00 0.00 6.09
4319 5136 3.319755 ACATCTTTTTCAATTGGCGCAG 58.680 40.909 10.83 0.00 0.00 5.18
4320 5137 2.437200 TCTTTTTCAATTGGCGCAGG 57.563 45.000 10.83 0.00 0.00 4.85
4331 5148 2.711924 GCGCAGGCTGCTGATAAC 59.288 61.111 34.17 14.40 42.25 1.89
4332 5149 1.817099 GCGCAGGCTGCTGATAACT 60.817 57.895 34.17 0.00 42.25 2.24
4333 5150 1.372087 GCGCAGGCTGCTGATAACTT 61.372 55.000 34.17 0.00 42.25 2.66
4334 5151 1.939974 CGCAGGCTGCTGATAACTTA 58.060 50.000 34.17 0.00 42.25 2.24
4335 5152 1.594862 CGCAGGCTGCTGATAACTTAC 59.405 52.381 34.17 4.17 42.25 2.34
4336 5153 1.943340 GCAGGCTGCTGATAACTTACC 59.057 52.381 31.37 0.00 40.96 2.85
4337 5154 2.680805 GCAGGCTGCTGATAACTTACCA 60.681 50.000 31.37 0.00 40.96 3.25
4338 5155 3.201290 CAGGCTGCTGATAACTTACCAG 58.799 50.000 0.00 0.00 0.00 4.00
4339 5156 2.840651 AGGCTGCTGATAACTTACCAGT 59.159 45.455 0.00 0.00 33.11 4.00
4340 5157 3.264450 AGGCTGCTGATAACTTACCAGTT 59.736 43.478 0.00 0.00 45.73 3.16
4341 5158 3.375299 GGCTGCTGATAACTTACCAGTTG 59.625 47.826 0.00 0.00 43.54 3.16
4342 5159 3.181506 GCTGCTGATAACTTACCAGTTGC 60.182 47.826 0.00 0.00 43.54 4.17
4343 5160 4.256920 CTGCTGATAACTTACCAGTTGCT 58.743 43.478 0.00 0.00 43.54 3.91
4344 5161 5.414789 TGCTGATAACTTACCAGTTGCTA 57.585 39.130 0.00 0.00 43.54 3.49
4345 5162 5.989477 TGCTGATAACTTACCAGTTGCTAT 58.011 37.500 0.00 0.00 43.54 2.97
4346 5163 7.119709 TGCTGATAACTTACCAGTTGCTATA 57.880 36.000 0.00 0.00 43.54 1.31
4347 5164 7.735917 TGCTGATAACTTACCAGTTGCTATAT 58.264 34.615 0.00 0.00 43.54 0.86
4348 5165 7.657354 TGCTGATAACTTACCAGTTGCTATATG 59.343 37.037 0.00 0.00 43.54 1.78
4349 5166 7.657761 GCTGATAACTTACCAGTTGCTATATGT 59.342 37.037 0.00 0.00 43.54 2.29
4388 5205 4.006989 TGTCGGAATAACTCCACCAAATG 58.993 43.478 0.00 0.00 45.74 2.32
4389 5206 3.013921 TCGGAATAACTCCACCAAATGC 58.986 45.455 0.00 0.00 45.74 3.56
4401 5218 1.695242 ACCAAATGCCATGCCCATATG 59.305 47.619 0.00 0.00 0.00 1.78
4405 5222 0.609957 ATGCCATGCCCATATGTCCG 60.610 55.000 1.24 0.00 0.00 4.79
4414 5231 4.096681 TGCCCATATGTCCGAAGATCTAT 58.903 43.478 0.00 0.00 0.00 1.98
4426 5243 7.123098 TGTCCGAAGATCTATACCACTTACAAA 59.877 37.037 0.00 0.00 0.00 2.83
4430 5247 7.376336 CGAAGATCTATACCACTTACAAAGACG 59.624 40.741 0.00 0.00 0.00 4.18
4435 5252 3.402628 ACCACTTACAAAGACGCTGAT 57.597 42.857 0.00 0.00 0.00 2.90
4440 5257 4.090642 CACTTACAAAGACGCTGATGACTC 59.909 45.833 0.00 0.00 0.00 3.36
4441 5258 2.086054 ACAAAGACGCTGATGACTCC 57.914 50.000 0.00 0.00 0.00 3.85
4442 5259 1.620819 ACAAAGACGCTGATGACTCCT 59.379 47.619 0.00 0.00 0.00 3.69
4450 5267 2.417933 CGCTGATGACTCCTTCCTTTTG 59.582 50.000 0.00 0.00 0.00 2.44
4498 5316 2.093394 TCACAACAGAAGAACACGGGAA 60.093 45.455 0.00 0.00 0.00 3.97
4501 5319 3.128068 ACAACAGAAGAACACGGGAAAAC 59.872 43.478 0.00 0.00 0.00 2.43
4513 5331 1.182667 GGGAAAACCATTCCTTCGGG 58.817 55.000 7.13 0.00 39.85 5.14
4641 5463 0.178973 TCCAGAGGACACGTCAAGGA 60.179 55.000 0.00 0.00 0.00 3.36
4652 5474 1.375326 GTCAAGGAAAGGCCCGAGT 59.625 57.895 0.00 0.00 37.37 4.18
4702 5524 6.020971 TCTCTTGCACAACTATCGACTTTA 57.979 37.500 0.00 0.00 0.00 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 84 5.276348 GCAAAGTAGCACACAAACAACAATC 60.276 40.000 0.00 0.00 0.00 2.67
293 294 3.222603 CCCACTTGGAGTAAGCTTGTTT 58.777 45.455 9.86 0.00 40.16 2.83
310 312 1.507141 CTCCGTGCTTTCACACCCAC 61.507 60.000 0.00 0.00 43.28 4.61
317 319 2.669569 GCTGCCTCCGTGCTTTCA 60.670 61.111 0.00 0.00 0.00 2.69
347 349 0.550914 TTGACACCTCCAACCTTGCT 59.449 50.000 0.00 0.00 0.00 3.91
378 380 3.370527 CCCAAACTGACGATCCACCTTAT 60.371 47.826 0.00 0.00 0.00 1.73
409 411 4.397103 TGAGCGAAGATGATGAAATGCTTT 59.603 37.500 0.00 0.00 0.00 3.51
413 415 5.064325 TGAACTGAGCGAAGATGATGAAATG 59.936 40.000 0.00 0.00 0.00 2.32
430 432 2.226200 CACAACAATGGCGATGAACTGA 59.774 45.455 0.00 0.00 0.00 3.41
500 502 3.008266 GGTGTGCTTACCTTGTACCCTAA 59.992 47.826 3.11 0.00 37.74 2.69
694 696 4.581824 CAGTTCCTGCATGGCATATACTTT 59.418 41.667 0.00 0.00 38.13 2.66
699 701 2.742428 ACAGTTCCTGCATGGCATAT 57.258 45.000 0.00 0.00 38.13 1.78
705 707 8.863049 GTTTAAATTATGAACAGTTCCTGCATG 58.137 33.333 10.93 0.00 34.37 4.06
722 724 3.083293 GGGGCGTGTCTGGTTTAAATTA 58.917 45.455 0.00 0.00 0.00 1.40
725 727 0.475044 AGGGGCGTGTCTGGTTTAAA 59.525 50.000 0.00 0.00 0.00 1.52
728 730 1.125711 ACTAGGGGCGTGTCTGGTTT 61.126 55.000 0.00 0.00 0.00 3.27
734 736 0.752376 AGAGCTACTAGGGGCGTGTC 60.752 60.000 0.00 0.00 0.00 3.67
748 750 8.457238 AAAAGTGATCTCTTTTGTAAAGAGCT 57.543 30.769 26.57 12.86 43.24 4.09
771 773 3.127895 CCGTGTGTGGTGAAAGAGAAAAA 59.872 43.478 0.00 0.00 0.00 1.94
772 774 2.680841 CCGTGTGTGGTGAAAGAGAAAA 59.319 45.455 0.00 0.00 0.00 2.29
773 775 2.285083 CCGTGTGTGGTGAAAGAGAAA 58.715 47.619 0.00 0.00 0.00 2.52
774 776 1.474320 CCCGTGTGTGGTGAAAGAGAA 60.474 52.381 0.00 0.00 0.00 2.87
775 777 0.105964 CCCGTGTGTGGTGAAAGAGA 59.894 55.000 0.00 0.00 0.00 3.10
776 778 0.179056 ACCCGTGTGTGGTGAAAGAG 60.179 55.000 0.00 0.00 33.94 2.85
777 779 0.253610 AACCCGTGTGTGGTGAAAGA 59.746 50.000 0.00 0.00 35.88 2.52
778 780 1.099689 AAACCCGTGTGTGGTGAAAG 58.900 50.000 0.00 0.00 35.88 2.62
779 781 1.202582 CAAAACCCGTGTGTGGTGAAA 59.797 47.619 0.00 0.00 35.88 2.69
780 782 0.811915 CAAAACCCGTGTGTGGTGAA 59.188 50.000 0.00 0.00 35.88 3.18
781 783 0.035343 TCAAAACCCGTGTGTGGTGA 60.035 50.000 0.00 0.00 35.88 4.02
782 784 1.028905 ATCAAAACCCGTGTGTGGTG 58.971 50.000 0.00 0.00 35.88 4.17
783 785 1.770294 AATCAAAACCCGTGTGTGGT 58.230 45.000 0.00 0.00 37.85 4.16
784 786 2.619177 TGTAATCAAAACCCGTGTGTGG 59.381 45.455 0.00 0.00 0.00 4.17
785 787 3.314080 AGTGTAATCAAAACCCGTGTGTG 59.686 43.478 0.00 0.00 0.00 3.82
786 788 3.314080 CAGTGTAATCAAAACCCGTGTGT 59.686 43.478 0.00 0.00 0.00 3.72
787 789 3.851838 GCAGTGTAATCAAAACCCGTGTG 60.852 47.826 0.00 0.00 0.00 3.82
788 790 2.292292 GCAGTGTAATCAAAACCCGTGT 59.708 45.455 0.00 0.00 0.00 4.49
789 791 2.351350 GGCAGTGTAATCAAAACCCGTG 60.351 50.000 0.00 0.00 0.00 4.94
790 792 1.883926 GGCAGTGTAATCAAAACCCGT 59.116 47.619 0.00 0.00 0.00 5.28
791 793 1.201414 GGGCAGTGTAATCAAAACCCG 59.799 52.381 0.00 0.00 0.00 5.28
792 794 1.201414 CGGGCAGTGTAATCAAAACCC 59.799 52.381 0.00 0.00 0.00 4.11
793 795 1.201414 CCGGGCAGTGTAATCAAAACC 59.799 52.381 0.00 0.00 0.00 3.27
794 796 1.883926 ACCGGGCAGTGTAATCAAAAC 59.116 47.619 6.32 0.00 0.00 2.43
795 797 2.156098 GACCGGGCAGTGTAATCAAAA 58.844 47.619 0.00 0.00 0.00 2.44
796 798 1.612199 GGACCGGGCAGTGTAATCAAA 60.612 52.381 11.00 0.00 0.00 2.69
797 799 0.035820 GGACCGGGCAGTGTAATCAA 60.036 55.000 11.00 0.00 0.00 2.57
798 800 1.600107 GGACCGGGCAGTGTAATCA 59.400 57.895 11.00 0.00 0.00 2.57
799 801 1.153229 GGGACCGGGCAGTGTAATC 60.153 63.158 11.00 0.00 0.00 1.75
800 802 1.493854 TTGGGACCGGGCAGTGTAAT 61.494 55.000 11.00 0.00 0.00 1.89
801 803 1.706995 TTTGGGACCGGGCAGTGTAA 61.707 55.000 11.00 0.00 0.00 2.41
802 804 1.706995 TTTTGGGACCGGGCAGTGTA 61.707 55.000 11.00 0.00 0.00 2.90
803 805 2.366153 ATTTTGGGACCGGGCAGTGT 62.366 55.000 11.00 0.00 0.00 3.55
804 806 0.322997 TATTTTGGGACCGGGCAGTG 60.323 55.000 11.00 0.00 0.00 3.66
805 807 0.406361 TTATTTTGGGACCGGGCAGT 59.594 50.000 11.00 0.00 0.00 4.40
806 808 1.102978 CTTATTTTGGGACCGGGCAG 58.897 55.000 11.00 0.00 0.00 4.85
807 809 0.406361 ACTTATTTTGGGACCGGGCA 59.594 50.000 11.00 0.00 0.00 5.36
808 810 0.815095 CACTTATTTTGGGACCGGGC 59.185 55.000 6.32 0.21 0.00 6.13
809 811 1.816224 CACACTTATTTTGGGACCGGG 59.184 52.381 6.32 0.00 0.00 5.73
810 812 1.816224 CCACACTTATTTTGGGACCGG 59.184 52.381 0.00 0.00 0.00 5.28
811 813 2.510613 ACCACACTTATTTTGGGACCG 58.489 47.619 0.00 0.00 34.41 4.79
812 814 3.892588 TCAACCACACTTATTTTGGGACC 59.107 43.478 0.00 0.00 34.41 4.46
813 815 5.722021 ATCAACCACACTTATTTTGGGAC 57.278 39.130 0.00 0.00 34.41 4.46
814 816 6.739331 AAATCAACCACACTTATTTTGGGA 57.261 33.333 0.00 0.00 34.41 4.37
815 817 7.666623 ACTAAATCAACCACACTTATTTTGGG 58.333 34.615 0.00 0.00 34.41 4.12
837 839 8.645110 GCCCCTCTGTGTTAAATTAGTATACTA 58.355 37.037 8.59 8.59 0.00 1.82
838 840 7.419865 GGCCCCTCTGTGTTAAATTAGTATACT 60.420 40.741 10.87 10.87 0.00 2.12
839 841 6.709397 GGCCCCTCTGTGTTAAATTAGTATAC 59.291 42.308 0.00 0.00 0.00 1.47
840 842 6.463331 CGGCCCCTCTGTGTTAAATTAGTATA 60.463 42.308 0.00 0.00 0.00 1.47
841 843 5.686650 CGGCCCCTCTGTGTTAAATTAGTAT 60.687 44.000 0.00 0.00 0.00 2.12
842 844 4.383335 CGGCCCCTCTGTGTTAAATTAGTA 60.383 45.833 0.00 0.00 0.00 1.82
843 845 3.621461 CGGCCCCTCTGTGTTAAATTAGT 60.621 47.826 0.00 0.00 0.00 2.24
844 846 2.943033 CGGCCCCTCTGTGTTAAATTAG 59.057 50.000 0.00 0.00 0.00 1.73
845 847 2.306512 ACGGCCCCTCTGTGTTAAATTA 59.693 45.455 0.00 0.00 31.81 1.40
846 848 1.074889 ACGGCCCCTCTGTGTTAAATT 59.925 47.619 0.00 0.00 31.81 1.82
847 849 0.696501 ACGGCCCCTCTGTGTTAAAT 59.303 50.000 0.00 0.00 31.81 1.40
848 850 1.350071 TACGGCCCCTCTGTGTTAAA 58.650 50.000 0.00 0.00 35.51 1.52
849 851 1.350071 TTACGGCCCCTCTGTGTTAA 58.650 50.000 0.00 0.00 35.51 2.01
850 852 1.350071 TTTACGGCCCCTCTGTGTTA 58.650 50.000 0.00 0.00 35.51 2.41
851 853 0.475044 TTTTACGGCCCCTCTGTGTT 59.525 50.000 0.00 0.00 35.51 3.32
852 854 0.475044 TTTTTACGGCCCCTCTGTGT 59.525 50.000 0.00 0.00 35.51 3.72
853 855 1.834188 ATTTTTACGGCCCCTCTGTG 58.166 50.000 0.00 0.00 35.51 3.66
854 856 2.443416 GAATTTTTACGGCCCCTCTGT 58.557 47.619 0.00 0.00 38.08 3.41
855 857 1.749063 GGAATTTTTACGGCCCCTCTG 59.251 52.381 0.00 0.00 0.00 3.35
856 858 1.341679 GGGAATTTTTACGGCCCCTCT 60.342 52.381 0.00 0.00 32.50 3.69
857 859 1.108776 GGGAATTTTTACGGCCCCTC 58.891 55.000 0.00 0.00 32.50 4.30
858 860 0.681887 CGGGAATTTTTACGGCCCCT 60.682 55.000 0.00 0.00 35.30 4.79
859 861 1.811195 CGGGAATTTTTACGGCCCC 59.189 57.895 0.00 0.00 35.30 5.80
860 862 1.140161 GCGGGAATTTTTACGGCCC 59.860 57.895 0.00 0.00 35.40 5.80
861 863 0.179148 CAGCGGGAATTTTTACGGCC 60.179 55.000 0.00 0.00 0.00 6.13
874 876 2.440796 ACCCAATCATGCAGCGGG 60.441 61.111 7.04 7.04 43.02 6.13
991 1008 4.545706 GTCATCCATGGCCGGCGA 62.546 66.667 22.54 19.14 0.00 5.54
997 1019 3.272334 GGCGTCGTCATCCATGGC 61.272 66.667 6.96 0.00 0.00 4.40
1306 1334 1.133325 GGAGATGTAGCTGAGGAGGGA 60.133 57.143 0.00 0.00 0.00 4.20
1442 1473 9.131791 GCTTCTATCCATTTTAATTTACCAGGA 57.868 33.333 0.00 0.00 0.00 3.86
1443 1474 8.912988 TGCTTCTATCCATTTTAATTTACCAGG 58.087 33.333 0.00 0.00 0.00 4.45
1460 1511 7.602517 TTTCAGCTAAAAGAGTGCTTCTATC 57.397 36.000 0.00 0.00 34.14 2.08
1468 1519 8.778358 ACAGACTTATTTTCAGCTAAAAGAGTG 58.222 33.333 16.05 10.38 40.32 3.51
1621 1675 4.219507 ACTCGAGACTCATGTGATCTGTTT 59.780 41.667 21.68 0.00 0.00 2.83
1641 1695 3.983741 AGTCACACAAAGACTAGCACTC 58.016 45.455 0.00 0.00 44.10 3.51
1664 1719 4.397417 AGACAGAATTTAGCAAGGCACATC 59.603 41.667 0.00 0.00 0.00 3.06
1692 1747 5.470098 CACATACATTATGTCCCAAGCTACC 59.530 44.000 0.00 0.00 45.83 3.18
1789 1849 4.986783 TCCCGATCTTAGCTGAGATTAGA 58.013 43.478 20.85 14.78 36.54 2.10
1806 1866 2.961531 TTCAGTCCCAAAAATCCCGA 57.038 45.000 0.00 0.00 0.00 5.14
1808 1868 2.501316 CCCATTCAGTCCCAAAAATCCC 59.499 50.000 0.00 0.00 0.00 3.85
1837 1902 9.201989 TCCCTATATTATATCCAAGTAGCACAG 57.798 37.037 0.00 0.00 0.00 3.66
1844 1909 6.610425 GGTCGGTCCCTATATTATATCCAAGT 59.390 42.308 0.00 0.00 0.00 3.16
1926 1991 3.416156 ACAGAAAAGTTCAGATGGCCTC 58.584 45.455 3.32 0.00 0.00 4.70
1979 2044 9.410556 CAAAGTGATTATTTGGTTTTCTACAGG 57.589 33.333 0.00 0.00 34.66 4.00
1996 2061 2.290641 GCACTCAACCGTCAAAGTGATT 59.709 45.455 5.59 0.00 41.26 2.57
2038 2103 6.609212 TCAGGACAGAGCTAATCTACATCTTT 59.391 38.462 0.00 0.00 36.10 2.52
2039 2104 6.132658 TCAGGACAGAGCTAATCTACATCTT 58.867 40.000 0.00 0.00 36.10 2.40
2040 2105 5.700183 TCAGGACAGAGCTAATCTACATCT 58.300 41.667 0.00 0.00 36.10 2.90
2041 2106 6.588719 ATCAGGACAGAGCTAATCTACATC 57.411 41.667 0.00 0.00 36.10 3.06
2042 2107 6.552725 TCAATCAGGACAGAGCTAATCTACAT 59.447 38.462 0.00 0.00 36.10 2.29
2043 2108 5.893824 TCAATCAGGACAGAGCTAATCTACA 59.106 40.000 0.00 0.00 36.10 2.74
2044 2109 6.040391 ACTCAATCAGGACAGAGCTAATCTAC 59.960 42.308 0.00 0.00 36.10 2.59
2045 2110 6.040278 CACTCAATCAGGACAGAGCTAATCTA 59.960 42.308 0.00 0.00 36.10 1.98
2046 2111 4.961730 ACTCAATCAGGACAGAGCTAATCT 59.038 41.667 0.00 0.00 39.56 2.40
2047 2112 5.049167 CACTCAATCAGGACAGAGCTAATC 58.951 45.833 0.00 0.00 0.00 1.75
2048 2113 4.141756 CCACTCAATCAGGACAGAGCTAAT 60.142 45.833 0.00 0.00 0.00 1.73
2049 2114 3.196469 CCACTCAATCAGGACAGAGCTAA 59.804 47.826 0.00 0.00 0.00 3.09
2050 2115 2.762887 CCACTCAATCAGGACAGAGCTA 59.237 50.000 0.00 0.00 0.00 3.32
2051 2116 1.554160 CCACTCAATCAGGACAGAGCT 59.446 52.381 0.00 0.00 0.00 4.09
2052 2117 2.011046 GCCACTCAATCAGGACAGAGC 61.011 57.143 0.00 0.00 0.00 4.09
2053 2118 1.554160 AGCCACTCAATCAGGACAGAG 59.446 52.381 0.00 0.00 0.00 3.35
2054 2119 1.649321 AGCCACTCAATCAGGACAGA 58.351 50.000 0.00 0.00 0.00 3.41
2055 2120 2.027377 AGAAGCCACTCAATCAGGACAG 60.027 50.000 0.00 0.00 0.00 3.51
2056 2121 1.980765 AGAAGCCACTCAATCAGGACA 59.019 47.619 0.00 0.00 0.00 4.02
2057 2122 2.777832 AGAAGCCACTCAATCAGGAC 57.222 50.000 0.00 0.00 0.00 3.85
2058 2123 3.776969 ACATAGAAGCCACTCAATCAGGA 59.223 43.478 0.00 0.00 0.00 3.86
2059 2124 3.875727 CACATAGAAGCCACTCAATCAGG 59.124 47.826 0.00 0.00 0.00 3.86
2060 2125 4.511527 ACACATAGAAGCCACTCAATCAG 58.488 43.478 0.00 0.00 0.00 2.90
2061 2126 4.558226 ACACATAGAAGCCACTCAATCA 57.442 40.909 0.00 0.00 0.00 2.57
2062 2127 5.886960 AAACACATAGAAGCCACTCAATC 57.113 39.130 0.00 0.00 0.00 2.67
2063 2128 6.006449 AGAAAACACATAGAAGCCACTCAAT 58.994 36.000 0.00 0.00 0.00 2.57
2064 2129 5.376625 AGAAAACACATAGAAGCCACTCAA 58.623 37.500 0.00 0.00 0.00 3.02
2065 2130 4.973168 AGAAAACACATAGAAGCCACTCA 58.027 39.130 0.00 0.00 0.00 3.41
2066 2131 5.703130 AGAAGAAAACACATAGAAGCCACTC 59.297 40.000 0.00 0.00 0.00 3.51
2067 2132 5.471456 CAGAAGAAAACACATAGAAGCCACT 59.529 40.000 0.00 0.00 0.00 4.00
2068 2133 5.693814 CAGAAGAAAACACATAGAAGCCAC 58.306 41.667 0.00 0.00 0.00 5.01
2069 2134 4.216257 GCAGAAGAAAACACATAGAAGCCA 59.784 41.667 0.00 0.00 0.00 4.75
2070 2135 4.457257 AGCAGAAGAAAACACATAGAAGCC 59.543 41.667 0.00 0.00 0.00 4.35
2071 2136 5.388944 CAGCAGAAGAAAACACATAGAAGC 58.611 41.667 0.00 0.00 0.00 3.86
2072 2137 5.471456 ACCAGCAGAAGAAAACACATAGAAG 59.529 40.000 0.00 0.00 0.00 2.85
2073 2138 5.239306 CACCAGCAGAAGAAAACACATAGAA 59.761 40.000 0.00 0.00 0.00 2.10
2074 2139 4.756642 CACCAGCAGAAGAAAACACATAGA 59.243 41.667 0.00 0.00 0.00 1.98
2075 2140 4.516698 ACACCAGCAGAAGAAAACACATAG 59.483 41.667 0.00 0.00 0.00 2.23
2076 2141 4.460263 ACACCAGCAGAAGAAAACACATA 58.540 39.130 0.00 0.00 0.00 2.29
2077 2142 3.290710 ACACCAGCAGAAGAAAACACAT 58.709 40.909 0.00 0.00 0.00 3.21
2078 2143 2.722094 ACACCAGCAGAAGAAAACACA 58.278 42.857 0.00 0.00 0.00 3.72
2079 2144 3.695816 GAACACCAGCAGAAGAAAACAC 58.304 45.455 0.00 0.00 0.00 3.32
2080 2145 2.354510 CGAACACCAGCAGAAGAAAACA 59.645 45.455 0.00 0.00 0.00 2.83
2081 2146 2.354821 ACGAACACCAGCAGAAGAAAAC 59.645 45.455 0.00 0.00 0.00 2.43
2082 2147 2.612212 GACGAACACCAGCAGAAGAAAA 59.388 45.455 0.00 0.00 0.00 2.29
2083 2148 2.158957 AGACGAACACCAGCAGAAGAAA 60.159 45.455 0.00 0.00 0.00 2.52
2084 2149 1.412710 AGACGAACACCAGCAGAAGAA 59.587 47.619 0.00 0.00 0.00 2.52
2085 2150 1.000163 GAGACGAACACCAGCAGAAGA 60.000 52.381 0.00 0.00 0.00 2.87
2086 2151 1.423395 GAGACGAACACCAGCAGAAG 58.577 55.000 0.00 0.00 0.00 2.85
2087 2152 0.033504 GGAGACGAACACCAGCAGAA 59.966 55.000 0.00 0.00 0.00 3.02
2088 2153 0.827925 AGGAGACGAACACCAGCAGA 60.828 55.000 0.00 0.00 0.00 4.26
2089 2154 0.668706 CAGGAGACGAACACCAGCAG 60.669 60.000 0.00 0.00 0.00 4.24
2090 2155 1.112916 TCAGGAGACGAACACCAGCA 61.113 55.000 0.00 0.00 0.00 4.41
2091 2156 0.033504 TTCAGGAGACGAACACCAGC 59.966 55.000 0.00 0.00 0.00 4.85
2092 2157 1.341531 ACTTCAGGAGACGAACACCAG 59.658 52.381 0.00 0.00 0.00 4.00
2093 2158 1.410004 ACTTCAGGAGACGAACACCA 58.590 50.000 0.00 0.00 0.00 4.17
2094 2159 3.219052 CTACTTCAGGAGACGAACACC 57.781 52.381 0.00 0.00 0.00 4.16
2130 2195 4.819630 GCCAAATTCCATCATGCATCAATT 59.180 37.500 0.00 0.00 0.00 2.32
2169 2234 0.684479 AGTCTGCAGCTACCGATGGA 60.684 55.000 9.47 0.00 0.00 3.41
2172 2237 1.407258 GAGAAGTCTGCAGCTACCGAT 59.593 52.381 9.47 0.00 0.00 4.18
2207 2273 5.212532 AGATGCATGAACCAGAGATAGTC 57.787 43.478 2.46 0.00 0.00 2.59
2211 2277 3.201487 TGGAAGATGCATGAACCAGAGAT 59.799 43.478 2.46 0.00 0.00 2.75
2213 2279 2.943690 CTGGAAGATGCATGAACCAGAG 59.056 50.000 25.62 10.31 45.02 3.35
2215 2281 2.719739 ACTGGAAGATGCATGAACCAG 58.280 47.619 26.89 26.89 46.78 4.00
2310 2376 5.591877 AGATTCTGATGGCTTGTTGGATAAC 59.408 40.000 0.00 0.00 37.32 1.89
2357 2423 3.304659 GGCACACTGAAACGTTCATCATT 60.305 43.478 0.00 0.00 39.30 2.57
2359 2425 1.601903 GGCACACTGAAACGTTCATCA 59.398 47.619 0.00 1.30 39.30 3.07
2386 2452 8.788806 CCCAATGTGTAAGTTAACTACATGAAA 58.211 33.333 18.68 8.29 32.75 2.69
2422 2490 5.920193 ACATAATGATTTGAACCCAGGTG 57.080 39.130 0.00 0.00 0.00 4.00
2454 2522 7.549488 GCTCCAACAGTGTAGTAAATATGAACT 59.451 37.037 0.00 0.00 0.00 3.01
2464 2532 2.176889 GGAGGCTCCAACAGTGTAGTA 58.823 52.381 28.55 0.00 36.28 1.82
2466 2534 1.205893 GAGGAGGCTCCAACAGTGTAG 59.794 57.143 33.86 0.00 39.61 2.74
2469 2537 1.205893 GTAGAGGAGGCTCCAACAGTG 59.794 57.143 33.86 0.00 39.61 3.66
2482 2550 8.547481 TGTATGTGAGGAAATATTGTAGAGGA 57.453 34.615 0.00 0.00 0.00 3.71
2510 2579 5.047306 GCATTCAGTAAGGCCCTTAGTTTTT 60.047 40.000 8.17 0.00 36.40 1.94
2511 2580 4.462834 GCATTCAGTAAGGCCCTTAGTTTT 59.537 41.667 8.17 0.00 36.40 2.43
2515 2584 2.213499 CGCATTCAGTAAGGCCCTTAG 58.787 52.381 2.67 0.00 39.20 2.18
2554 2623 8.965819 TGTTAATACCATGCAATACAGATTTGT 58.034 29.630 0.00 0.00 41.39 2.83
2555 2624 9.800433 TTGTTAATACCATGCAATACAGATTTG 57.200 29.630 0.00 0.00 0.00 2.32
2566 2635 8.309656 TGTTGATTTGATTGTTAATACCATGCA 58.690 29.630 0.00 0.00 0.00 3.96
2673 2745 1.963515 ACAGCTTAGGGGTTTTGCTTG 59.036 47.619 0.00 0.00 0.00 4.01
2740 2812 8.792830 AAGAAAATAGCAACTATGACTAGCAA 57.207 30.769 0.00 0.00 0.00 3.91
2750 2822 8.630054 ACACAACCATAAGAAAATAGCAACTA 57.370 30.769 0.00 0.00 0.00 2.24
2768 2840 3.123050 GCACCAAAAGATCAACACAACC 58.877 45.455 0.00 0.00 0.00 3.77
2806 2878 1.891150 GTTAGGTCGTCAGGAAGTGGA 59.109 52.381 0.00 0.00 0.00 4.02
2814 2894 1.359848 GCCATGTGTTAGGTCGTCAG 58.640 55.000 0.00 0.00 0.00 3.51
2819 2899 2.159014 TGATACCGCCATGTGTTAGGTC 60.159 50.000 0.00 0.00 36.49 3.85
2834 2914 4.989279 AAATGCCACATGACTTGATACC 57.011 40.909 0.00 0.00 0.00 2.73
2849 2992 5.466393 ACATGCAGTTCTAAACAAAAATGCC 59.534 36.000 5.26 0.00 43.67 4.40
2851 2994 7.436080 AGTCACATGCAGTTCTAAACAAAAATG 59.564 33.333 0.00 0.00 0.00 2.32
2857 3000 3.814842 CCAGTCACATGCAGTTCTAAACA 59.185 43.478 0.00 0.00 0.00 2.83
2858 3001 4.065088 TCCAGTCACATGCAGTTCTAAAC 58.935 43.478 0.00 0.00 0.00 2.01
2861 3004 2.899900 ACTCCAGTCACATGCAGTTCTA 59.100 45.455 0.00 0.00 0.00 2.10
2862 3005 1.696336 ACTCCAGTCACATGCAGTTCT 59.304 47.619 0.00 0.00 0.00 3.01
2863 3006 2.175878 ACTCCAGTCACATGCAGTTC 57.824 50.000 0.00 0.00 0.00 3.01
2865 3008 2.899900 TCTAACTCCAGTCACATGCAGT 59.100 45.455 0.00 0.00 0.00 4.40
2866 3009 3.056250 AGTCTAACTCCAGTCACATGCAG 60.056 47.826 0.00 0.00 0.00 4.41
2897 3057 5.763698 CCATGCTGTCAGATTCATCATAACT 59.236 40.000 3.32 0.00 0.00 2.24
2898 3058 5.761726 TCCATGCTGTCAGATTCATCATAAC 59.238 40.000 3.32 0.00 0.00 1.89
2899 3059 5.932455 TCCATGCTGTCAGATTCATCATAA 58.068 37.500 3.32 0.00 0.00 1.90
2912 3072 6.363357 GTGAAAGTAAAACATTCCATGCTGTC 59.637 38.462 0.00 0.00 0.00 3.51
3040 3200 2.629137 TGCATTGAGACATGGCAAGTTT 59.371 40.909 0.00 0.00 0.00 2.66
3094 3254 5.084818 TCGTTGGATACTTCATCACACAT 57.915 39.130 0.00 0.00 35.11 3.21
3466 3626 0.674581 CTGGCGCACTTGGATCTCAA 60.675 55.000 10.83 0.00 0.00 3.02
3520 3680 1.969862 CCCGGTACTTGAAGTCGGT 59.030 57.895 19.76 0.00 34.80 4.69
3627 3787 0.598680 CATCGAACTCGGCATCCTCC 60.599 60.000 0.00 0.00 40.29 4.30
3653 3816 3.575630 CCCACACCGTCGATATAATCAG 58.424 50.000 0.00 0.00 0.00 2.90
3708 3871 1.203287 TCACAGCTCCTTCAGACATCG 59.797 52.381 0.00 0.00 0.00 3.84
3737 3905 2.317609 CCTTGCACGTGAGAACCCG 61.318 63.158 22.23 0.00 0.00 5.28
3751 3919 1.515521 GCACCAAGTTCCCGTCCTTG 61.516 60.000 0.00 0.00 38.21 3.61
3785 3957 4.894784 TCAAGAATCCCAACACAGTAGAC 58.105 43.478 0.00 0.00 0.00 2.59
3787 3959 4.697352 CCTTCAAGAATCCCAACACAGTAG 59.303 45.833 0.00 0.00 0.00 2.57
3798 3971 0.618981 ACCCGGTCCTTCAAGAATCC 59.381 55.000 0.00 0.00 0.00 3.01
3810 3983 1.890510 AAAGTGCGTGAACCCGGTC 60.891 57.895 0.00 0.00 0.00 4.79
3811 3984 2.184167 CAAAGTGCGTGAACCCGGT 61.184 57.895 0.00 0.00 0.00 5.28
3812 3985 1.720694 AACAAAGTGCGTGAACCCGG 61.721 55.000 0.00 0.00 0.00 5.73
3813 3986 0.938713 TAACAAAGTGCGTGAACCCG 59.061 50.000 0.00 0.00 0.00 5.28
3839 4012 7.283127 AGGCACAAACATAATACGAGAATCAAT 59.717 33.333 0.00 0.00 33.17 2.57
3841 4014 6.112734 AGGCACAAACATAATACGAGAATCA 58.887 36.000 0.00 0.00 33.17 2.57
3853 4026 3.561143 ACAAACAGGAGGCACAAACATA 58.439 40.909 0.00 0.00 0.00 2.29
3854 4027 2.387757 ACAAACAGGAGGCACAAACAT 58.612 42.857 0.00 0.00 0.00 2.71
3855 4028 1.846007 ACAAACAGGAGGCACAAACA 58.154 45.000 0.00 0.00 0.00 2.83
3863 4036 8.968969 AGAGTATACTAGTTAACAAACAGGAGG 58.031 37.037 5.09 0.00 0.00 4.30
3868 4041 9.635520 GCAAGAGAGTATACTAGTTAACAAACA 57.364 33.333 5.09 0.00 0.00 2.83
3893 4066 1.103398 ACAAACAGGAGGCACACAGC 61.103 55.000 0.00 0.00 44.65 4.40
3894 4067 1.392589 AACAAACAGGAGGCACACAG 58.607 50.000 0.00 0.00 0.00 3.66
3895 4068 2.685897 GTTAACAAACAGGAGGCACACA 59.314 45.455 0.00 0.00 0.00 3.72
3896 4069 2.949644 AGTTAACAAACAGGAGGCACAC 59.050 45.455 8.61 0.00 0.00 3.82
3897 4070 3.290948 AGTTAACAAACAGGAGGCACA 57.709 42.857 8.61 0.00 0.00 4.57
3898 4071 4.386711 ACTAGTTAACAAACAGGAGGCAC 58.613 43.478 8.61 0.00 0.00 5.01
3899 4072 4.699925 ACTAGTTAACAAACAGGAGGCA 57.300 40.909 8.61 0.00 0.00 4.75
3900 4073 7.554211 AGTATACTAGTTAACAAACAGGAGGC 58.446 38.462 2.75 0.00 0.00 4.70
3901 4074 8.968969 AGAGTATACTAGTTAACAAACAGGAGG 58.031 37.037 5.09 0.00 0.00 4.30
3903 4076 9.750783 AGAGAGTATACTAGTTAACAAACAGGA 57.249 33.333 5.09 0.00 0.00 3.86
3906 4079 9.635520 GCAAGAGAGTATACTAGTTAACAAACA 57.364 33.333 5.09 0.00 0.00 2.83
3907 4080 9.857957 AGCAAGAGAGTATACTAGTTAACAAAC 57.142 33.333 5.09 0.00 0.00 2.93
3908 4081 9.856488 CAGCAAGAGAGTATACTAGTTAACAAA 57.144 33.333 5.09 0.00 0.00 2.83
3909 4082 9.021807 ACAGCAAGAGAGTATACTAGTTAACAA 57.978 33.333 5.09 0.00 0.00 2.83
3910 4083 8.459635 CACAGCAAGAGAGTATACTAGTTAACA 58.540 37.037 5.09 0.00 0.00 2.41
3911 4084 8.675504 TCACAGCAAGAGAGTATACTAGTTAAC 58.324 37.037 5.09 0.00 0.00 2.01
3912 4085 8.803397 TCACAGCAAGAGAGTATACTAGTTAA 57.197 34.615 5.09 0.00 0.00 2.01
3913 4086 8.675504 GTTCACAGCAAGAGAGTATACTAGTTA 58.324 37.037 5.09 0.00 0.00 2.24
3914 4087 7.540299 GTTCACAGCAAGAGAGTATACTAGTT 58.460 38.462 5.09 0.00 0.00 2.24
3915 4088 6.183360 CGTTCACAGCAAGAGAGTATACTAGT 60.183 42.308 5.09 0.00 0.00 2.57
3916 4089 6.195868 CGTTCACAGCAAGAGAGTATACTAG 58.804 44.000 5.09 0.00 0.00 2.57
3917 4090 5.066117 CCGTTCACAGCAAGAGAGTATACTA 59.934 44.000 5.09 0.00 0.00 1.82
3918 4091 4.142359 CCGTTCACAGCAAGAGAGTATACT 60.142 45.833 4.68 4.68 0.00 2.12
3919 4092 4.106197 CCGTTCACAGCAAGAGAGTATAC 58.894 47.826 0.00 0.00 0.00 1.47
3920 4093 3.130516 CCCGTTCACAGCAAGAGAGTATA 59.869 47.826 0.00 0.00 0.00 1.47
3921 4094 2.093973 CCCGTTCACAGCAAGAGAGTAT 60.094 50.000 0.00 0.00 0.00 2.12
3939 4112 1.992170 CAGAGACGAAACTAACCCCG 58.008 55.000 0.00 0.00 0.00 5.73
3940 4113 1.723220 GCAGAGACGAAACTAACCCC 58.277 55.000 0.00 0.00 0.00 4.95
3946 4120 2.440539 ACAATCGCAGAGACGAAACT 57.559 45.000 0.00 0.00 46.59 2.66
3948 4122 5.856126 AAATTACAATCGCAGAGACGAAA 57.144 34.783 0.00 0.00 46.59 3.46
3951 4125 5.050769 AGCATAAATTACAATCGCAGAGACG 60.051 40.000 0.00 0.00 43.63 4.18
3952 4126 6.132056 CAGCATAAATTACAATCGCAGAGAC 58.868 40.000 0.00 0.00 43.63 3.36
4025 4200 5.385509 ACCTAACACAACATAACATTGGC 57.614 39.130 0.00 0.00 0.00 4.52
4054 4230 1.602323 TTGGGCAAACACTAGGGCG 60.602 57.895 0.00 0.00 0.00 6.13
4071 4247 9.601810 TCCTAGTATCATTGACCTACATATGTT 57.398 33.333 14.77 0.00 0.00 2.71
4072 4248 9.601810 TTCCTAGTATCATTGACCTACATATGT 57.398 33.333 13.93 13.93 0.00 2.29
4076 4252 8.811017 CATCTTCCTAGTATCATTGACCTACAT 58.189 37.037 0.00 0.00 0.00 2.29
4079 4255 6.726299 CCCATCTTCCTAGTATCATTGACCTA 59.274 42.308 0.00 0.00 0.00 3.08
4080 4256 5.545723 CCCATCTTCCTAGTATCATTGACCT 59.454 44.000 0.00 0.00 0.00 3.85
4081 4257 5.544176 TCCCATCTTCCTAGTATCATTGACC 59.456 44.000 0.00 0.00 0.00 4.02
4082 4258 6.672266 TCCCATCTTCCTAGTATCATTGAC 57.328 41.667 0.00 0.00 0.00 3.18
4119 4893 3.490348 ACCCAATGACTCTTCCTGTTTG 58.510 45.455 0.00 0.00 0.00 2.93
4136 4910 1.280133 CTCTGCATCTTGGAGAACCCA 59.720 52.381 0.43 0.00 44.20 4.51
4137 4911 1.556911 TCTCTGCATCTTGGAGAACCC 59.443 52.381 0.39 0.00 44.20 4.11
4138 4912 3.204526 CATCTCTGCATCTTGGAGAACC 58.795 50.000 6.69 0.00 44.20 3.62
4140 4914 2.915349 GCATCTCTGCATCTTGGAGAA 58.085 47.619 6.69 0.00 44.20 2.87
4152 4926 5.528043 ACCATAGTTCTGTAGCATCTCTG 57.472 43.478 0.00 0.00 0.00 3.35
4166 4940 7.918076 TGGTCTCTTAGAAATGAACCATAGTT 58.082 34.615 0.00 0.00 39.54 2.24
4167 4941 7.496346 TGGTCTCTTAGAAATGAACCATAGT 57.504 36.000 0.00 0.00 0.00 2.12
4168 4942 7.041508 GCATGGTCTCTTAGAAATGAACCATAG 60.042 40.741 3.97 1.64 34.15 2.23
4169 4943 6.767902 GCATGGTCTCTTAGAAATGAACCATA 59.232 38.462 3.97 0.00 34.15 2.74
4170 4944 5.591877 GCATGGTCTCTTAGAAATGAACCAT 59.408 40.000 0.00 0.00 36.04 3.55
4171 4945 4.943705 GCATGGTCTCTTAGAAATGAACCA 59.056 41.667 0.00 0.00 0.00 3.67
4172 4946 4.336713 GGCATGGTCTCTTAGAAATGAACC 59.663 45.833 0.00 0.00 0.00 3.62
4173 4947 4.943705 TGGCATGGTCTCTTAGAAATGAAC 59.056 41.667 0.00 0.00 0.00 3.18
4174 4948 5.178096 TGGCATGGTCTCTTAGAAATGAA 57.822 39.130 0.00 0.00 0.00 2.57
4175 4949 4.842531 TGGCATGGTCTCTTAGAAATGA 57.157 40.909 0.00 0.00 0.00 2.57
4176 4950 6.057533 TGTATGGCATGGTCTCTTAGAAATG 58.942 40.000 10.98 0.00 0.00 2.32
4177 4951 6.252599 TGTATGGCATGGTCTCTTAGAAAT 57.747 37.500 10.98 0.00 0.00 2.17
4178 4952 5.692115 TGTATGGCATGGTCTCTTAGAAA 57.308 39.130 10.98 0.00 0.00 2.52
4179 4953 5.894298 ATGTATGGCATGGTCTCTTAGAA 57.106 39.130 10.98 0.00 36.26 2.10
4180 4954 6.498303 ACATATGTATGGCATGGTCTCTTAGA 59.502 38.462 10.98 0.00 38.47 2.10
4181 4955 6.705302 ACATATGTATGGCATGGTCTCTTAG 58.295 40.000 10.98 0.00 38.47 2.18
4182 4956 6.686484 ACATATGTATGGCATGGTCTCTTA 57.314 37.500 10.98 0.00 38.47 2.10
4183 4957 5.573380 ACATATGTATGGCATGGTCTCTT 57.427 39.130 10.98 0.00 38.47 2.85
4184 4958 5.337894 GCTACATATGTATGGCATGGTCTCT 60.338 44.000 15.81 0.00 38.47 3.10
4185 4959 4.872691 GCTACATATGTATGGCATGGTCTC 59.127 45.833 15.81 0.00 38.47 3.36
4186 4960 4.533707 AGCTACATATGTATGGCATGGTCT 59.466 41.667 22.21 7.87 38.47 3.85
4187 4961 4.836825 AGCTACATATGTATGGCATGGTC 58.163 43.478 22.21 1.30 38.47 4.02
4188 4962 4.286808 TGAGCTACATATGTATGGCATGGT 59.713 41.667 22.21 13.41 38.47 3.55
4189 4963 4.835678 TGAGCTACATATGTATGGCATGG 58.164 43.478 22.21 9.71 38.47 3.66
4190 4964 5.350640 CACTGAGCTACATATGTATGGCATG 59.649 44.000 22.21 15.54 38.47 4.06
4191 4965 5.012458 ACACTGAGCTACATATGTATGGCAT 59.988 40.000 22.21 4.88 41.42 4.40
4192 4966 4.344968 ACACTGAGCTACATATGTATGGCA 59.655 41.667 22.21 15.87 38.00 4.92
4193 4967 4.687948 CACACTGAGCTACATATGTATGGC 59.312 45.833 15.81 15.79 38.00 4.40
4194 4968 6.089249 TCACACTGAGCTACATATGTATGG 57.911 41.667 15.81 6.87 38.00 2.74
4195 4969 7.150640 ACATCACACTGAGCTACATATGTATG 58.849 38.462 15.81 12.14 39.55 2.39
4196 4970 7.295322 ACATCACACTGAGCTACATATGTAT 57.705 36.000 15.81 2.31 0.00 2.29
4197 4971 6.715347 ACATCACACTGAGCTACATATGTA 57.285 37.500 14.75 14.75 0.00 2.29
4198 4972 5.604758 ACATCACACTGAGCTACATATGT 57.395 39.130 13.93 13.93 0.00 2.29
4199 4973 6.915544 AAACATCACACTGAGCTACATATG 57.084 37.500 0.00 0.00 0.00 1.78
4200 4974 9.698309 GTATAAACATCACACTGAGCTACATAT 57.302 33.333 0.00 0.00 0.00 1.78
4201 4975 8.691797 TGTATAAACATCACACTGAGCTACATA 58.308 33.333 0.00 0.00 0.00 2.29
4202 4976 7.555965 TGTATAAACATCACACTGAGCTACAT 58.444 34.615 0.00 0.00 0.00 2.29
4203 4977 6.930731 TGTATAAACATCACACTGAGCTACA 58.069 36.000 0.00 0.00 0.00 2.74
4204 4978 8.331022 CAATGTATAAACATCACACTGAGCTAC 58.669 37.037 0.00 0.00 45.79 3.58
4205 4979 8.040727 ACAATGTATAAACATCACACTGAGCTA 58.959 33.333 0.00 0.00 45.79 3.32
4206 4980 6.881065 ACAATGTATAAACATCACACTGAGCT 59.119 34.615 0.00 0.00 45.79 4.09
4207 4981 7.076842 ACAATGTATAAACATCACACTGAGC 57.923 36.000 0.00 0.00 45.79 4.26
4248 5022 7.561356 ACAACCAGATTTATTGGGAGGATTTAG 59.439 37.037 0.00 0.00 40.11 1.85
4259 5033 4.266029 GCGAATGCACAACCAGATTTATTG 59.734 41.667 0.00 0.00 42.15 1.90
4263 5037 1.888512 AGCGAATGCACAACCAGATTT 59.111 42.857 0.00 0.00 46.23 2.17
4265 5039 0.806868 CAGCGAATGCACAACCAGAT 59.193 50.000 0.00 0.00 46.23 2.90
4268 5042 1.028130 TTTCAGCGAATGCACAACCA 58.972 45.000 0.00 0.00 46.23 3.67
4269 5043 1.408422 GTTTCAGCGAATGCACAACC 58.592 50.000 0.00 0.00 46.23 3.77
4273 5047 1.866237 TCGGTTTCAGCGAATGCAC 59.134 52.632 0.00 0.00 45.67 4.57
4296 5113 3.005684 TGCGCCAATTGAAAAAGATGTCT 59.994 39.130 7.12 0.00 0.00 3.41
4298 5115 3.319755 CTGCGCCAATTGAAAAAGATGT 58.680 40.909 7.12 0.00 0.00 3.06
4299 5116 2.669434 CCTGCGCCAATTGAAAAAGATG 59.331 45.455 7.12 0.00 0.00 2.90
4301 5118 1.605202 GCCTGCGCCAATTGAAAAAGA 60.605 47.619 7.12 0.00 0.00 2.52
4302 5119 0.792031 GCCTGCGCCAATTGAAAAAG 59.208 50.000 7.12 0.00 0.00 2.27
4303 5120 0.392336 AGCCTGCGCCAATTGAAAAA 59.608 45.000 7.12 0.00 34.57 1.94
4316 5133 1.943340 GGTAAGTTATCAGCAGCCTGC 59.057 52.381 9.13 9.13 45.46 4.85
4317 5134 3.201290 CTGGTAAGTTATCAGCAGCCTG 58.799 50.000 10.19 0.00 40.54 4.85
4318 5135 2.840651 ACTGGTAAGTTATCAGCAGCCT 59.159 45.455 20.86 0.67 42.62 4.58
4319 5136 3.268023 ACTGGTAAGTTATCAGCAGCC 57.732 47.619 20.86 0.22 42.62 4.85
4320 5137 3.181506 GCAACTGGTAAGTTATCAGCAGC 60.182 47.826 20.86 19.72 45.07 5.25
4321 5138 4.256920 AGCAACTGGTAAGTTATCAGCAG 58.743 43.478 20.86 14.85 45.07 4.24
4322 5139 4.286297 AGCAACTGGTAAGTTATCAGCA 57.714 40.909 20.86 0.00 45.07 4.41
4323 5140 7.657761 ACATATAGCAACTGGTAAGTTATCAGC 59.342 37.037 20.86 9.90 45.07 4.26
4370 5187 3.096092 TGGCATTTGGTGGAGTTATTCC 58.904 45.455 0.00 0.00 46.98 3.01
4388 5205 0.537143 TTCGGACATATGGGCATGGC 60.537 55.000 11.56 11.56 32.74 4.40
4389 5206 1.072173 TCTTCGGACATATGGGCATGG 59.928 52.381 7.80 0.00 0.00 3.66
4401 5218 6.630444 TGTAAGTGGTATAGATCTTCGGAC 57.370 41.667 0.00 0.00 0.00 4.79
4405 5222 7.167801 GCGTCTTTGTAAGTGGTATAGATCTTC 59.832 40.741 0.00 0.00 0.00 2.87
4414 5231 4.021807 TCATCAGCGTCTTTGTAAGTGGTA 60.022 41.667 0.00 0.00 0.00 3.25
4426 5243 0.820871 GGAAGGAGTCATCAGCGTCT 59.179 55.000 0.00 0.00 0.00 4.18
4430 5247 3.679389 TCAAAAGGAAGGAGTCATCAGC 58.321 45.455 0.00 0.00 0.00 4.26
4435 5252 5.373812 AGTCTTTCAAAAGGAAGGAGTCA 57.626 39.130 2.83 0.00 40.18 3.41
4440 5257 3.813166 TGCGTAGTCTTTCAAAAGGAAGG 59.187 43.478 2.83 0.00 36.72 3.46
4441 5258 4.511826 AGTGCGTAGTCTTTCAAAAGGAAG 59.488 41.667 2.83 0.00 36.72 3.46
4442 5259 4.272504 CAGTGCGTAGTCTTTCAAAAGGAA 59.727 41.667 2.83 0.00 36.67 3.36
4450 5267 2.030185 TCAGGTCAGTGCGTAGTCTTTC 60.030 50.000 0.00 0.00 0.00 2.62
4641 5463 1.318576 CTTGTTTCACTCGGGCCTTT 58.681 50.000 0.84 0.00 0.00 3.11
4652 5474 5.575157 TGTATATTCAAGGGCCTTGTTTCA 58.425 37.500 37.83 26.05 41.66 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.