Multiple sequence alignment - TraesCS1D01G033800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G033800 chr1D 100.000 8743 0 0 1 8743 13818663 13809921 0.000000e+00 16146.0
1 TraesCS1D01G033800 chr1D 97.673 4340 95 5 4409 8743 13725500 13721162 0.000000e+00 7450.0
2 TraesCS1D01G033800 chr1D 99.174 2664 21 1 510 3172 13729005 13726342 0.000000e+00 4796.0
3 TraesCS1D01G033800 chr1D 89.155 2462 239 24 4117 6564 99962012 99959565 0.000000e+00 3042.0
4 TraesCS1D01G033800 chr1D 88.417 2167 203 15 3175 5296 444291881 444289718 0.000000e+00 2567.0
5 TraesCS1D01G033800 chr1D 88.716 1737 174 18 5327 7049 262734251 262732523 0.000000e+00 2102.0
6 TraesCS1D01G033800 chr1D 96.226 1007 34 2 7116 8118 13817104 13816098 0.000000e+00 1646.0
7 TraesCS1D01G033800 chr1D 95.730 1007 39 2 7116 8118 13727955 13726949 0.000000e+00 1618.0
8 TraesCS1D01G033800 chr1D 93.681 364 18 3 8357 8716 13726662 13726300 2.780000e-149 540.0
9 TraesCS1D01G033800 chr1D 94.375 320 15 2 2853 3172 13721548 13721232 1.020000e-133 488.0
10 TraesCS1D01G033800 chr1D 94.375 320 15 2 2853 3172 13810307 13809991 1.020000e-133 488.0
11 TraesCS1D01G033800 chr1D 94.375 320 15 2 8357 8673 13815811 13815492 1.020000e-133 488.0
12 TraesCS1D01G033800 chr1D 91.542 201 17 0 8136 8336 13726855 13726655 2.400000e-70 278.0
13 TraesCS1D01G033800 chr1D 97.826 46 1 0 458 503 13729093 13729048 7.280000e-11 80.5
14 TraesCS1D01G033800 chr5D 86.768 3930 436 53 3175 7048 436847537 436843636 0.000000e+00 4300.0
15 TraesCS1D01G033800 chr5D 86.633 2798 312 41 3162 5935 85767798 85765039 0.000000e+00 3038.0
16 TraesCS1D01G033800 chr5D 87.018 2696 311 32 3183 5868 564598919 564601585 0.000000e+00 3003.0
17 TraesCS1D01G033800 chr1B 92.830 2664 137 24 516 3172 20048241 20045625 0.000000e+00 3812.0
18 TraesCS1D01G033800 chr1B 94.197 2361 119 13 510 2860 19620477 19618125 0.000000e+00 3585.0
19 TraesCS1D01G033800 chr1B 93.943 2361 126 12 510 2860 19840031 19837678 0.000000e+00 3552.0
20 TraesCS1D01G033800 chr1B 93.901 2361 127 12 510 2860 19951907 19949554 0.000000e+00 3546.0
21 TraesCS1D01G033800 chr1B 93.558 2375 121 16 510 2860 19720437 19718071 0.000000e+00 3509.0
22 TraesCS1D01G033800 chr1B 93.387 2359 129 14 512 2860 19781055 19778714 0.000000e+00 3467.0
23 TraesCS1D01G033800 chr1B 92.232 2240 122 23 329 2534 20554574 20556795 0.000000e+00 3125.0
24 TraesCS1D01G033800 chr1B 94.494 1925 89 12 946 2860 19892022 19890105 0.000000e+00 2952.0
25 TraesCS1D01G033800 chr1B 93.382 1632 78 10 7116 8743 20555824 20557429 0.000000e+00 2388.0
26 TraesCS1D01G033800 chr1B 94.632 1006 51 3 7116 8118 19891408 19890403 0.000000e+00 1555.0
27 TraesCS1D01G033800 chr1B 94.433 1006 53 3 7116 8118 19619428 19618423 0.000000e+00 1544.0
28 TraesCS1D01G033800 chr1B 94.176 1013 55 4 7109 8118 19780023 19779012 0.000000e+00 1541.0
29 TraesCS1D01G033800 chr1B 94.334 1006 54 3 7116 8118 19950857 19949852 0.000000e+00 1539.0
30 TraesCS1D01G033800 chr1B 94.235 1006 55 3 7116 8118 19838981 19837976 0.000000e+00 1533.0
31 TraesCS1D01G033800 chr1B 94.124 1004 56 3 7118 8118 20047226 20046223 0.000000e+00 1524.0
32 TraesCS1D01G033800 chr1B 89.626 588 51 6 8135 8712 19890314 19889727 0.000000e+00 739.0
33 TraesCS1D01G033800 chr1B 89.286 588 53 6 8135 8712 19837887 19837300 0.000000e+00 728.0
34 TraesCS1D01G033800 chr1B 89.286 588 53 6 8135 8712 19949763 19949176 0.000000e+00 728.0
35 TraesCS1D01G033800 chr1B 88.776 588 56 6 8135 8712 19618334 19617747 0.000000e+00 712.0
36 TraesCS1D01G033800 chr1B 88.776 588 56 6 8135 8712 19718280 19717693 0.000000e+00 712.0
37 TraesCS1D01G033800 chr1B 93.367 392 18 6 8357 8743 20045942 20045554 2.740000e-159 573.0
38 TraesCS1D01G033800 chr1B 93.769 321 17 3 2853 3172 20557041 20557359 6.140000e-131 479.0
39 TraesCS1D01G033800 chr1B 90.343 321 28 2 2853 3172 19890084 19889766 1.360000e-112 418.0
40 TraesCS1D01G033800 chr1B 90.031 321 29 2 2853 3172 19949533 19949215 6.320000e-111 412.0
41 TraesCS1D01G033800 chr1B 89.720 321 30 2 2853 3172 19778693 19778375 2.940000e-109 407.0
42 TraesCS1D01G033800 chr1B 92.574 202 13 1 8135 8336 20046134 20045935 1.110000e-73 289.0
43 TraesCS1D01G033800 chr1B 92.045 176 13 1 329 503 20048465 20048290 6.780000e-61 246.0
44 TraesCS1D01G033800 chr1B 88.406 69 5 2 7054 7119 367017861 367017793 7.280000e-11 80.5
45 TraesCS1D01G033800 chr1A 93.554 2296 94 6 570 2864 14792339 14790097 0.000000e+00 3371.0
46 TraesCS1D01G033800 chr1A 88.748 1502 137 17 4292 5765 126048304 126049801 0.000000e+00 1808.0
47 TraesCS1D01G033800 chr1A 91.326 1003 55 14 7118 8118 14791347 14790375 0.000000e+00 1341.0
48 TraesCS1D01G033800 chr1A 90.200 949 84 5 7118 8062 14839325 14838382 0.000000e+00 1229.0
49 TraesCS1D01G033800 chr1A 93.671 632 37 3 8115 8743 14790321 14789690 0.000000e+00 942.0
50 TraesCS1D01G033800 chr1A 92.835 321 20 2 2853 3172 14790079 14789761 6.180000e-126 462.0
51 TraesCS1D01G033800 chr1A 84.825 257 28 7 322 574 14795199 14794950 1.880000e-61 248.0
52 TraesCS1D01G033800 chr2D 89.715 2557 218 22 4109 6647 47881211 47878682 0.000000e+00 3223.0
53 TraesCS1D01G033800 chr2D 89.318 2200 210 13 4871 7049 24300111 24297916 0.000000e+00 2737.0
54 TraesCS1D01G033800 chr2D 88.664 2170 204 19 3162 5296 136809873 136812035 0.000000e+00 2606.0
55 TraesCS1D01G033800 chr2D 89.619 1705 163 12 5353 7050 24304758 24303061 0.000000e+00 2156.0
56 TraesCS1D01G033800 chr2D 89.461 1689 166 11 3175 4857 608057 606375 0.000000e+00 2122.0
57 TraesCS1D01G033800 chr2D 89.474 76 5 1 7047 7119 382045889 382045964 9.350000e-15 93.5
58 TraesCS1D01G033800 chr7D 88.657 2160 194 31 3183 5296 568808623 568810777 0.000000e+00 2584.0
59 TraesCS1D01G033800 chr7D 88.344 2162 198 19 3183 5296 60611488 60609333 0.000000e+00 2547.0
60 TraesCS1D01G033800 chr6D 88.300 2171 200 20 3175 5296 465247470 465245305 0.000000e+00 2553.0
61 TraesCS1D01G033800 chr2B 89.021 1849 169 12 3175 4995 239686386 239684544 0.000000e+00 2259.0
62 TraesCS1D01G033800 chr2B 95.804 286 11 1 40 324 612071172 612070887 2.220000e-125 460.0
63 TraesCS1D01G033800 chr2B 95.804 286 11 1 40 324 612077488 612077203 2.220000e-125 460.0
64 TraesCS1D01G033800 chr2B 88.406 69 5 2 7054 7119 452790257 452790325 7.280000e-11 80.5
65 TraesCS1D01G033800 chr3D 90.085 1654 157 7 3175 4824 502328699 502327049 0.000000e+00 2139.0
66 TraesCS1D01G033800 chr3D 88.889 1737 170 17 5327 7048 316718916 316717188 0.000000e+00 2117.0
67 TraesCS1D01G033800 chr4D 88.934 1735 171 16 5324 7048 446807354 446809077 0.000000e+00 2121.0
68 TraesCS1D01G033800 chr4D 89.124 1701 174 11 3162 4857 388327758 388329452 0.000000e+00 2106.0
69 TraesCS1D01G033800 chr4A 95.862 290 11 1 38 326 125402715 125403004 1.330000e-127 468.0
70 TraesCS1D01G033800 chr3A 95.804 286 11 1 40 324 739239541 739239256 2.220000e-125 460.0
71 TraesCS1D01G033800 chr2A 94.898 294 14 1 37 329 39974844 39974551 8.000000e-125 459.0
72 TraesCS1D01G033800 chr5A 95.172 290 13 1 38 326 41430478 41430189 2.880000e-124 457.0
73 TraesCS1D01G033800 chr7B 94.558 294 15 1 34 326 194755139 194755432 3.720000e-123 453.0
74 TraesCS1D01G033800 chr7B 89.855 69 4 1 7054 7119 483721910 483721842 1.560000e-12 86.1
75 TraesCS1D01G033800 chr5B 93.980 299 17 1 33 330 648311918 648312216 1.340000e-122 451.0
76 TraesCS1D01G033800 chr5B 94.257 296 16 1 36 330 648343275 648342980 1.340000e-122 451.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G033800 chr1D 13809921 13818663 8742 True 16146.000000 16146 100.000000 1 8743 1 chr1D.!!$R3 8742
1 TraesCS1D01G033800 chr1D 13721162 13725500 4338 True 7450.000000 7450 97.673000 4409 8743 1 chr1D.!!$R1 4334
2 TraesCS1D01G033800 chr1D 99959565 99962012 2447 True 3042.000000 3042 89.155000 4117 6564 1 chr1D.!!$R5 2447
3 TraesCS1D01G033800 chr1D 444289718 444291881 2163 True 2567.000000 2567 88.417000 3175 5296 1 chr1D.!!$R7 2121
4 TraesCS1D01G033800 chr1D 262732523 262734251 1728 True 2102.000000 2102 88.716000 5327 7049 1 chr1D.!!$R6 1722
5 TraesCS1D01G033800 chr1D 13726300 13729093 2793 True 1462.500000 4796 95.590600 458 8716 5 chr1D.!!$R8 8258
6 TraesCS1D01G033800 chr1D 13815492 13817104 1612 True 1067.000000 1646 95.300500 7116 8673 2 chr1D.!!$R9 1557
7 TraesCS1D01G033800 chr5D 436843636 436847537 3901 True 4300.000000 4300 86.768000 3175 7048 1 chr5D.!!$R2 3873
8 TraesCS1D01G033800 chr5D 85765039 85767798 2759 True 3038.000000 3038 86.633000 3162 5935 1 chr5D.!!$R1 2773
9 TraesCS1D01G033800 chr5D 564598919 564601585 2666 False 3003.000000 3003 87.018000 3183 5868 1 chr5D.!!$F1 2685
10 TraesCS1D01G033800 chr1B 19717693 19720437 2744 True 2110.500000 3509 91.167000 510 8712 2 chr1B.!!$R3 8202
11 TraesCS1D01G033800 chr1B 20554574 20557429 2855 False 1997.333333 3125 93.127667 329 8743 3 chr1B.!!$F1 8414
12 TraesCS1D01G033800 chr1B 19617747 19620477 2730 True 1947.000000 3585 92.468667 510 8712 3 chr1B.!!$R2 8202
13 TraesCS1D01G033800 chr1B 19837300 19840031 2731 True 1937.666667 3552 92.488000 510 8712 3 chr1B.!!$R5 8202
14 TraesCS1D01G033800 chr1B 19778375 19781055 2680 True 1805.000000 3467 92.427667 512 8118 3 chr1B.!!$R4 7606
15 TraesCS1D01G033800 chr1B 19949176 19951907 2731 True 1556.250000 3546 91.888000 510 8712 4 chr1B.!!$R7 8202
16 TraesCS1D01G033800 chr1B 19889727 19892022 2295 True 1416.000000 2952 92.273750 946 8712 4 chr1B.!!$R6 7766
17 TraesCS1D01G033800 chr1B 20045554 20048465 2911 True 1288.800000 3812 92.988000 329 8743 5 chr1B.!!$R8 8414
18 TraesCS1D01G033800 chr1A 126048304 126049801 1497 False 1808.000000 1808 88.748000 4292 5765 1 chr1A.!!$F1 1473
19 TraesCS1D01G033800 chr1A 14789690 14795199 5509 True 1272.800000 3371 91.242200 322 8743 5 chr1A.!!$R2 8421
20 TraesCS1D01G033800 chr1A 14838382 14839325 943 True 1229.000000 1229 90.200000 7118 8062 1 chr1A.!!$R1 944
21 TraesCS1D01G033800 chr2D 47878682 47881211 2529 True 3223.000000 3223 89.715000 4109 6647 1 chr2D.!!$R2 2538
22 TraesCS1D01G033800 chr2D 136809873 136812035 2162 False 2606.000000 2606 88.664000 3162 5296 1 chr2D.!!$F1 2134
23 TraesCS1D01G033800 chr2D 24297916 24304758 6842 True 2446.500000 2737 89.468500 4871 7050 2 chr2D.!!$R3 2179
24 TraesCS1D01G033800 chr2D 606375 608057 1682 True 2122.000000 2122 89.461000 3175 4857 1 chr2D.!!$R1 1682
25 TraesCS1D01G033800 chr7D 568808623 568810777 2154 False 2584.000000 2584 88.657000 3183 5296 1 chr7D.!!$F1 2113
26 TraesCS1D01G033800 chr7D 60609333 60611488 2155 True 2547.000000 2547 88.344000 3183 5296 1 chr7D.!!$R1 2113
27 TraesCS1D01G033800 chr6D 465245305 465247470 2165 True 2553.000000 2553 88.300000 3175 5296 1 chr6D.!!$R1 2121
28 TraesCS1D01G033800 chr2B 239684544 239686386 1842 True 2259.000000 2259 89.021000 3175 4995 1 chr2B.!!$R1 1820
29 TraesCS1D01G033800 chr3D 502327049 502328699 1650 True 2139.000000 2139 90.085000 3175 4824 1 chr3D.!!$R2 1649
30 TraesCS1D01G033800 chr3D 316717188 316718916 1728 True 2117.000000 2117 88.889000 5327 7048 1 chr3D.!!$R1 1721
31 TraesCS1D01G033800 chr4D 446807354 446809077 1723 False 2121.000000 2121 88.934000 5324 7048 1 chr4D.!!$F2 1724
32 TraesCS1D01G033800 chr4D 388327758 388329452 1694 False 2106.000000 2106 89.124000 3162 4857 1 chr4D.!!$F1 1695

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
433 435 0.034337 AGGCAAAACAAGGCATGCTG 59.966 50.000 18.92 11.66 38.79 4.41 F
956 3648 1.109323 GCACCTGACAAACCCTTGCT 61.109 55.000 0.00 0.00 35.84 3.91 F
960 3652 1.545428 CCTGACAAACCCTTGCTAGCA 60.545 52.381 14.93 14.93 35.84 3.49 F
961 3653 2.229792 CTGACAAACCCTTGCTAGCAA 58.770 47.619 27.67 27.67 35.84 3.91 F
2828 5523 1.662629 CAGCCATCAATCGAGACACAC 59.337 52.381 0.00 0.00 0.00 3.82 F
3576 6304 1.668826 AGCCCCAAGTAAGATGACCA 58.331 50.000 0.00 0.00 0.00 4.02 F
5355 8629 1.227853 AACGGCGCCAGAAAAGACT 60.228 52.632 28.98 0.00 0.00 3.24 F
6431 9779 1.123217 CGCGATACATCAAGATCGTGC 59.877 52.381 0.00 0.00 45.64 5.34 F
6609 9974 4.215399 TCAAGATTGGTTTTTCGTGGCTAG 59.785 41.667 0.00 0.00 0.00 3.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2241 4933 4.201891 CGCTCTCGTAACCACTTGTAGTAT 60.202 45.833 0.00 0.0 0.00 2.12 R
2800 5495 3.009723 TCGATTGATGGCTGGAAAAGAC 58.990 45.455 0.00 0.0 0.00 3.01 R
2828 5523 4.047627 AGTTCCTGGGGTGAAAAATAGG 57.952 45.455 0.00 0.0 0.00 2.57 R
3150 5877 8.545229 TTTCATGGTTTCAATATCGCATTTTT 57.455 26.923 0.00 0.0 0.00 1.94 R
4535 7281 3.209410 GGGAGAGGAACATATGCTTGTG 58.791 50.000 1.58 0.0 0.00 3.33 R
5538 8874 1.703411 ATTTGGTGTGTTGGGGACAG 58.297 50.000 0.00 0.0 44.54 3.51 R
7452 10824 2.042162 AGGGTGTGCAATCCAGAAGATT 59.958 45.455 10.04 0.0 46.54 2.40 R
7644 11017 0.340208 CCCCACTCCTTACCCTCTCT 59.660 60.000 0.00 0.0 0.00 3.10 R
7823 11196 2.936919 ACTCAGAACAGCCATCACAA 57.063 45.000 0.00 0.0 0.00 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.875080 GAACACAAATCGAGAACCGG 57.125 50.000 0.00 0.00 39.14 5.28
20 21 0.872388 AACACAAATCGAGAACCGGC 59.128 50.000 0.00 0.00 39.14 6.13
22 23 1.086696 CACAAATCGAGAACCGGCAT 58.913 50.000 0.00 0.00 39.14 4.40
23 24 1.062587 CACAAATCGAGAACCGGCATC 59.937 52.381 0.00 0.00 39.14 3.91
24 25 0.657840 CAAATCGAGAACCGGCATCC 59.342 55.000 0.00 0.00 39.14 3.51
25 26 0.463833 AAATCGAGAACCGGCATCCC 60.464 55.000 0.00 0.00 39.14 3.85
26 27 2.325393 AATCGAGAACCGGCATCCCC 62.325 60.000 0.00 0.00 39.14 4.81
27 28 3.781307 CGAGAACCGGCATCCCCA 61.781 66.667 0.00 0.00 33.91 4.96
28 29 2.674754 GAGAACCGGCATCCCCAA 59.325 61.111 0.00 0.00 0.00 4.12
29 30 1.227383 GAGAACCGGCATCCCCAAT 59.773 57.895 0.00 0.00 0.00 3.16
30 31 1.076777 AGAACCGGCATCCCCAATG 60.077 57.895 0.00 0.00 38.50 2.82
31 32 1.077068 GAACCGGCATCCCCAATGA 60.077 57.895 0.00 0.00 37.59 2.57
32 33 1.379843 AACCGGCATCCCCAATGAC 60.380 57.895 0.00 0.00 40.35 3.06
33 34 2.519302 CCGGCATCCCCAATGACC 60.519 66.667 0.00 0.00 40.70 4.02
34 35 2.597340 CGGCATCCCCAATGACCT 59.403 61.111 0.00 0.00 40.70 3.85
35 36 1.526917 CGGCATCCCCAATGACCTC 60.527 63.158 0.00 0.00 40.70 3.85
36 37 1.152673 GGCATCCCCAATGACCTCC 60.153 63.158 0.00 0.00 37.43 4.30
37 38 1.649271 GGCATCCCCAATGACCTCCT 61.649 60.000 0.00 0.00 37.43 3.69
38 39 1.140312 GCATCCCCAATGACCTCCTA 58.860 55.000 0.00 0.00 37.59 2.94
39 40 1.494721 GCATCCCCAATGACCTCCTAA 59.505 52.381 0.00 0.00 37.59 2.69
40 41 2.487986 GCATCCCCAATGACCTCCTAAG 60.488 54.545 0.00 0.00 37.59 2.18
41 42 5.649165 GCATCCCCAATGACCTCCTAAGG 62.649 56.522 0.00 0.00 41.13 2.69
51 52 1.511613 CCTCCTAAGGGCATCTCCAA 58.488 55.000 0.00 0.00 39.21 3.53
54 55 1.839994 TCCTAAGGGCATCTCCAACAG 59.160 52.381 0.00 0.00 36.21 3.16
56 57 1.561542 CTAAGGGCATCTCCAACAGGT 59.438 52.381 0.00 0.00 36.21 4.00
57 58 0.779997 AAGGGCATCTCCAACAGGTT 59.220 50.000 0.00 0.00 36.21 3.50
58 59 0.038744 AGGGCATCTCCAACAGGTTG 59.961 55.000 5.19 5.19 40.13 3.77
59 60 0.251341 GGGCATCTCCAACAGGTTGT 60.251 55.000 10.91 0.00 38.85 3.32
60 61 1.004277 GGGCATCTCCAACAGGTTGTA 59.996 52.381 10.91 0.00 38.85 2.41
61 62 2.357154 GGGCATCTCCAACAGGTTGTAT 60.357 50.000 10.91 0.00 38.85 2.29
65 66 4.941263 GCATCTCCAACAGGTTGTATGTTA 59.059 41.667 10.91 0.00 38.80 2.41
66 67 5.065218 GCATCTCCAACAGGTTGTATGTTAG 59.935 44.000 10.91 0.31 38.80 2.34
67 68 5.818678 TCTCCAACAGGTTGTATGTTAGT 57.181 39.130 10.91 0.00 38.80 2.24
68 69 5.790593 TCTCCAACAGGTTGTATGTTAGTC 58.209 41.667 10.91 0.00 38.80 2.59
69 70 5.542635 TCTCCAACAGGTTGTATGTTAGTCT 59.457 40.000 10.91 0.00 38.80 3.24
70 71 6.042781 TCTCCAACAGGTTGTATGTTAGTCTT 59.957 38.462 10.91 0.00 38.80 3.01
72 73 5.763204 CCAACAGGTTGTATGTTAGTCTTGT 59.237 40.000 10.91 0.00 38.80 3.16
74 75 6.861065 ACAGGTTGTATGTTAGTCTTGTTG 57.139 37.500 0.00 0.00 0.00 3.33
78 79 7.442969 CAGGTTGTATGTTAGTCTTGTTGGTAA 59.557 37.037 0.00 0.00 0.00 2.85
79 80 7.994334 AGGTTGTATGTTAGTCTTGTTGGTAAA 59.006 33.333 0.00 0.00 0.00 2.01
80 81 8.789762 GGTTGTATGTTAGTCTTGTTGGTAAAT 58.210 33.333 0.00 0.00 0.00 1.40
81 82 9.607285 GTTGTATGTTAGTCTTGTTGGTAAATG 57.393 33.333 0.00 0.00 0.00 2.32
83 84 8.995220 TGTATGTTAGTCTTGTTGGTAAATGTC 58.005 33.333 0.00 0.00 0.00 3.06
84 85 6.870971 TGTTAGTCTTGTTGGTAAATGTCC 57.129 37.500 0.00 0.00 0.00 4.02
85 86 6.358178 TGTTAGTCTTGTTGGTAAATGTCCA 58.642 36.000 0.00 0.00 0.00 4.02
86 87 7.001674 TGTTAGTCTTGTTGGTAAATGTCCAT 58.998 34.615 0.00 0.00 34.75 3.41
87 88 5.964958 AGTCTTGTTGGTAAATGTCCATG 57.035 39.130 0.00 0.00 34.75 3.66
88 89 5.385198 AGTCTTGTTGGTAAATGTCCATGT 58.615 37.500 0.00 0.00 34.75 3.21
89 90 5.473504 AGTCTTGTTGGTAAATGTCCATGTC 59.526 40.000 0.00 0.00 34.75 3.06
90 91 5.240623 GTCTTGTTGGTAAATGTCCATGTCA 59.759 40.000 0.00 0.00 34.75 3.58
91 92 6.009589 TCTTGTTGGTAAATGTCCATGTCAT 58.990 36.000 0.00 0.00 34.75 3.06
92 93 5.895636 TGTTGGTAAATGTCCATGTCATC 57.104 39.130 0.00 0.00 34.75 2.92
93 94 5.320277 TGTTGGTAAATGTCCATGTCATCA 58.680 37.500 0.00 0.00 34.75 3.07
94 95 5.772169 TGTTGGTAAATGTCCATGTCATCAA 59.228 36.000 0.00 0.00 34.75 2.57
95 96 5.895636 TGGTAAATGTCCATGTCATCAAC 57.104 39.130 0.00 0.00 0.00 3.18
96 97 4.704540 TGGTAAATGTCCATGTCATCAACC 59.295 41.667 16.28 16.28 33.97 3.77
98 99 5.184864 GGTAAATGTCCATGTCATCAACCAA 59.815 40.000 17.24 0.00 33.76 3.67
99 100 4.789012 AATGTCCATGTCATCAACCAAC 57.211 40.909 0.00 0.00 0.00 3.77
101 102 3.560105 TGTCCATGTCATCAACCAACAA 58.440 40.909 0.00 0.00 0.00 2.83
102 103 3.569277 TGTCCATGTCATCAACCAACAAG 59.431 43.478 0.00 0.00 0.00 3.16
103 104 2.557924 TCCATGTCATCAACCAACAAGC 59.442 45.455 0.00 0.00 0.00 4.01
104 105 2.559668 CCATGTCATCAACCAACAAGCT 59.440 45.455 0.00 0.00 0.00 3.74
106 107 4.400251 CCATGTCATCAACCAACAAGCTAT 59.600 41.667 0.00 0.00 0.00 2.97
107 108 5.449588 CCATGTCATCAACCAACAAGCTATC 60.450 44.000 0.00 0.00 0.00 2.08
108 109 4.650734 TGTCATCAACCAACAAGCTATCA 58.349 39.130 0.00 0.00 0.00 2.15
110 111 6.413892 TGTCATCAACCAACAAGCTATCATA 58.586 36.000 0.00 0.00 0.00 2.15
111 112 6.316140 TGTCATCAACCAACAAGCTATCATAC 59.684 38.462 0.00 0.00 0.00 2.39
112 113 6.316140 GTCATCAACCAACAAGCTATCATACA 59.684 38.462 0.00 0.00 0.00 2.29
113 114 6.883756 TCATCAACCAACAAGCTATCATACAA 59.116 34.615 0.00 0.00 0.00 2.41
114 115 6.494893 TCAACCAACAAGCTATCATACAAC 57.505 37.500 0.00 0.00 0.00 3.32
115 116 6.237901 TCAACCAACAAGCTATCATACAACT 58.762 36.000 0.00 0.00 0.00 3.16
116 117 7.390823 TCAACCAACAAGCTATCATACAACTA 58.609 34.615 0.00 0.00 0.00 2.24
118 119 6.947464 ACCAACAAGCTATCATACAACTACT 58.053 36.000 0.00 0.00 0.00 2.57
119 120 7.394816 ACCAACAAGCTATCATACAACTACTT 58.605 34.615 0.00 0.00 0.00 2.24
120 121 7.549488 ACCAACAAGCTATCATACAACTACTTC 59.451 37.037 0.00 0.00 0.00 3.01
121 122 7.549134 CCAACAAGCTATCATACAACTACTTCA 59.451 37.037 0.00 0.00 0.00 3.02
122 123 8.935844 CAACAAGCTATCATACAACTACTTCAA 58.064 33.333 0.00 0.00 0.00 2.69
123 124 9.672673 AACAAGCTATCATACAACTACTTCAAT 57.327 29.630 0.00 0.00 0.00 2.57
124 125 9.102757 ACAAGCTATCATACAACTACTTCAATG 57.897 33.333 0.00 0.00 0.00 2.82
128 129 7.499232 GCTATCATACAACTACTTCAATGGGTT 59.501 37.037 0.00 0.00 0.00 4.11
129 130 7.630242 ATCATACAACTACTTCAATGGGTTG 57.370 36.000 0.00 0.00 41.75 3.77
133 134 6.817765 ACAACTACTTCAATGGGTTGTATG 57.182 37.500 7.80 5.77 45.35 2.39
135 136 7.455058 ACAACTACTTCAATGGGTTGTATGTA 58.545 34.615 7.80 0.00 45.35 2.29
137 138 8.450964 CAACTACTTCAATGGGTTGTATGTAAG 58.549 37.037 0.00 0.00 36.69 2.34
138 139 5.897377 ACTTCAATGGGTTGTATGTAAGC 57.103 39.130 0.00 0.00 36.69 3.09
139 140 5.570320 ACTTCAATGGGTTGTATGTAAGCT 58.430 37.500 0.00 0.00 36.69 3.74
140 141 6.717289 ACTTCAATGGGTTGTATGTAAGCTA 58.283 36.000 0.00 0.00 36.69 3.32
141 142 7.346471 ACTTCAATGGGTTGTATGTAAGCTAT 58.654 34.615 0.00 0.00 36.69 2.97
142 143 7.499232 ACTTCAATGGGTTGTATGTAAGCTATC 59.501 37.037 0.00 0.00 36.69 2.08
143 144 6.296026 TCAATGGGTTGTATGTAAGCTATCC 58.704 40.000 0.00 0.00 36.69 2.59
144 145 5.904984 ATGGGTTGTATGTAAGCTATCCA 57.095 39.130 0.00 0.00 0.00 3.41
145 146 5.702065 TGGGTTGTATGTAAGCTATCCAA 57.298 39.130 0.00 0.00 0.00 3.53
146 147 5.680619 TGGGTTGTATGTAAGCTATCCAAG 58.319 41.667 0.00 0.00 0.00 3.61
147 148 5.427157 TGGGTTGTATGTAAGCTATCCAAGA 59.573 40.000 0.00 0.00 0.00 3.02
148 149 5.992217 GGGTTGTATGTAAGCTATCCAAGAG 59.008 44.000 0.00 0.00 0.00 2.85
149 150 6.183360 GGGTTGTATGTAAGCTATCCAAGAGA 60.183 42.308 0.00 0.00 0.00 3.10
150 151 7.445945 GGTTGTATGTAAGCTATCCAAGAGAT 58.554 38.462 0.00 0.00 39.15 2.75
151 152 7.386299 GGTTGTATGTAAGCTATCCAAGAGATG 59.614 40.741 0.00 0.00 36.33 2.90
167 168 8.059798 CCAAGAGATGGTGAGAAAATAAATGT 57.940 34.615 0.00 0.00 44.85 2.71
168 169 7.972277 CCAAGAGATGGTGAGAAAATAAATGTG 59.028 37.037 0.00 0.00 44.85 3.21
169 170 7.636150 AGAGATGGTGAGAAAATAAATGTGG 57.364 36.000 0.00 0.00 0.00 4.17
171 172 7.671398 AGAGATGGTGAGAAAATAAATGTGGTT 59.329 33.333 0.00 0.00 0.00 3.67
172 173 7.605449 AGATGGTGAGAAAATAAATGTGGTTG 58.395 34.615 0.00 0.00 0.00 3.77
173 174 5.537188 TGGTGAGAAAATAAATGTGGTTGC 58.463 37.500 0.00 0.00 0.00 4.17
174 175 5.304101 TGGTGAGAAAATAAATGTGGTTGCT 59.696 36.000 0.00 0.00 0.00 3.91
175 176 5.863935 GGTGAGAAAATAAATGTGGTTGCTC 59.136 40.000 0.00 0.00 0.00 4.26
176 177 6.294731 GGTGAGAAAATAAATGTGGTTGCTCT 60.295 38.462 0.00 0.00 0.00 4.09
177 178 6.803807 GTGAGAAAATAAATGTGGTTGCTCTC 59.196 38.462 0.00 0.00 0.00 3.20
178 179 6.716628 TGAGAAAATAAATGTGGTTGCTCTCT 59.283 34.615 0.00 0.00 0.00 3.10
179 180 7.882791 TGAGAAAATAAATGTGGTTGCTCTCTA 59.117 33.333 0.00 0.00 0.00 2.43
181 182 9.247861 AGAAAATAAATGTGGTTGCTCTCTATT 57.752 29.630 0.00 0.00 0.00 1.73
184 185 8.579850 AATAAATGTGGTTGCTCTCTATTTCA 57.420 30.769 0.00 0.00 0.00 2.69
186 187 6.690194 AATGTGGTTGCTCTCTATTTCATC 57.310 37.500 0.00 0.00 0.00 2.92
189 190 5.645067 TGTGGTTGCTCTCTATTTCATCTTG 59.355 40.000 0.00 0.00 0.00 3.02
190 191 5.877012 GTGGTTGCTCTCTATTTCATCTTGA 59.123 40.000 0.00 0.00 0.00 3.02
191 192 6.372659 GTGGTTGCTCTCTATTTCATCTTGAA 59.627 38.462 0.00 0.00 34.03 2.69
192 193 6.596888 TGGTTGCTCTCTATTTCATCTTGAAG 59.403 38.462 0.00 0.00 37.70 3.02
194 195 5.987098 TGCTCTCTATTTCATCTTGAAGCT 58.013 37.500 0.00 0.00 37.70 3.74
195 196 6.413052 TGCTCTCTATTTCATCTTGAAGCTT 58.587 36.000 0.00 0.00 37.70 3.74
196 197 6.315642 TGCTCTCTATTTCATCTTGAAGCTTG 59.684 38.462 2.10 0.00 37.70 4.01
197 198 6.315891 GCTCTCTATTTCATCTTGAAGCTTGT 59.684 38.462 2.10 0.00 37.70 3.16
198 199 7.606858 TCTCTATTTCATCTTGAAGCTTGTG 57.393 36.000 2.10 0.00 37.70 3.33
199 200 6.093219 TCTCTATTTCATCTTGAAGCTTGTGC 59.907 38.462 2.10 0.00 37.70 4.57
200 201 4.859304 ATTTCATCTTGAAGCTTGTGCA 57.141 36.364 2.10 0.00 37.70 4.57
201 202 4.652421 TTTCATCTTGAAGCTTGTGCAA 57.348 36.364 2.10 0.64 37.70 4.08
203 204 4.233123 TCATCTTGAAGCTTGTGCAAAG 57.767 40.909 2.10 0.00 42.74 2.77
204 205 3.005050 TCATCTTGAAGCTTGTGCAAAGG 59.995 43.478 2.10 0.00 42.74 3.11
206 207 2.760092 TCTTGAAGCTTGTGCAAAGGTT 59.240 40.909 19.13 19.13 42.74 3.50
207 208 2.582728 TGAAGCTTGTGCAAAGGTTG 57.417 45.000 22.10 0.00 42.74 3.77
208 209 1.824230 TGAAGCTTGTGCAAAGGTTGT 59.176 42.857 22.10 7.42 42.74 3.32
209 210 2.233431 TGAAGCTTGTGCAAAGGTTGTT 59.767 40.909 22.10 6.89 42.74 2.83
210 211 2.298411 AGCTTGTGCAAAGGTTGTTG 57.702 45.000 7.29 0.00 42.74 3.33
212 213 1.405391 GCTTGTGCAAAGGTTGTTGGT 60.405 47.619 9.63 0.00 39.41 3.67
216 217 4.744795 TGTGCAAAGGTTGTTGGTTAAT 57.255 36.364 0.00 0.00 0.00 1.40
217 218 4.688021 TGTGCAAAGGTTGTTGGTTAATC 58.312 39.130 0.00 0.00 0.00 1.75
219 220 5.594725 TGTGCAAAGGTTGTTGGTTAATCTA 59.405 36.000 0.00 0.00 0.00 1.98
220 221 5.918576 GTGCAAAGGTTGTTGGTTAATCTAC 59.081 40.000 0.00 0.00 0.00 2.59
224 225 8.466798 GCAAAGGTTGTTGGTTAATCTACATAT 58.533 33.333 3.82 0.00 0.00 1.78
241 242 8.172352 TCTACATATAACTTTGCTCTCTCTCC 57.828 38.462 0.00 0.00 0.00 3.71
242 243 6.798427 ACATATAACTTTGCTCTCTCTCCA 57.202 37.500 0.00 0.00 0.00 3.86
243 244 6.578023 ACATATAACTTTGCTCTCTCTCCAC 58.422 40.000 0.00 0.00 0.00 4.02
244 245 6.155221 ACATATAACTTTGCTCTCTCTCCACA 59.845 38.462 0.00 0.00 0.00 4.17
245 246 5.690464 ATAACTTTGCTCTCTCTCCACAT 57.310 39.130 0.00 0.00 0.00 3.21
247 248 4.363991 ACTTTGCTCTCTCTCCACATTT 57.636 40.909 0.00 0.00 0.00 2.32
248 249 5.489792 ACTTTGCTCTCTCTCCACATTTA 57.510 39.130 0.00 0.00 0.00 1.40
249 250 5.869579 ACTTTGCTCTCTCTCCACATTTAA 58.130 37.500 0.00 0.00 0.00 1.52
250 251 6.479884 ACTTTGCTCTCTCTCCACATTTAAT 58.520 36.000 0.00 0.00 0.00 1.40
252 253 7.550906 ACTTTGCTCTCTCTCCACATTTAATAC 59.449 37.037 0.00 0.00 0.00 1.89
254 255 7.129457 TGCTCTCTCTCCACATTTAATACAT 57.871 36.000 0.00 0.00 0.00 2.29
255 256 6.988580 TGCTCTCTCTCCACATTTAATACATG 59.011 38.462 0.00 0.00 0.00 3.21
256 257 6.073331 GCTCTCTCTCCACATTTAATACATGC 60.073 42.308 0.00 0.00 0.00 4.06
257 258 6.291377 TCTCTCTCCACATTTAATACATGCC 58.709 40.000 0.00 0.00 0.00 4.40
258 259 6.000246 TCTCTCCACATTTAATACATGCCA 58.000 37.500 0.00 0.00 0.00 4.92
259 260 5.822519 TCTCTCCACATTTAATACATGCCAC 59.177 40.000 0.00 0.00 0.00 5.01
260 261 5.504853 TCTCCACATTTAATACATGCCACA 58.495 37.500 0.00 0.00 0.00 4.17
261 262 6.128486 TCTCCACATTTAATACATGCCACAT 58.872 36.000 0.00 0.00 0.00 3.21
262 263 6.262944 TCTCCACATTTAATACATGCCACATC 59.737 38.462 0.00 0.00 0.00 3.06
263 264 5.890419 TCCACATTTAATACATGCCACATCA 59.110 36.000 0.00 0.00 0.00 3.07
264 265 6.550481 TCCACATTTAATACATGCCACATCAT 59.450 34.615 0.00 0.00 0.00 2.45
265 266 6.864685 CCACATTTAATACATGCCACATCATC 59.135 38.462 0.00 0.00 0.00 2.92
266 267 7.427214 CACATTTAATACATGCCACATCATCA 58.573 34.615 0.00 0.00 0.00 3.07
267 268 7.380333 CACATTTAATACATGCCACATCATCAC 59.620 37.037 0.00 0.00 0.00 3.06
268 269 7.286087 ACATTTAATACATGCCACATCATCACT 59.714 33.333 0.00 0.00 0.00 3.41
269 270 8.785946 CATTTAATACATGCCACATCATCACTA 58.214 33.333 0.00 0.00 0.00 2.74
270 271 8.922931 TTTAATACATGCCACATCATCACTAT 57.077 30.769 0.00 0.00 0.00 2.12
273 274 4.132336 ACATGCCACATCATCACTATGTC 58.868 43.478 0.00 0.00 35.39 3.06
274 275 3.198409 TGCCACATCATCACTATGTCC 57.802 47.619 0.00 0.00 35.39 4.02
275 276 2.773661 TGCCACATCATCACTATGTCCT 59.226 45.455 0.00 0.00 35.39 3.85
276 277 3.966665 TGCCACATCATCACTATGTCCTA 59.033 43.478 0.00 0.00 35.39 2.94
277 278 4.039609 TGCCACATCATCACTATGTCCTAG 59.960 45.833 0.00 0.00 35.39 3.02
278 279 4.562347 GCCACATCATCACTATGTCCTAGG 60.562 50.000 0.82 0.82 35.39 3.02
281 282 4.590647 ACATCATCACTATGTCCTAGGTGG 59.409 45.833 9.08 0.00 32.02 4.61
282 283 2.965831 TCATCACTATGTCCTAGGTGGC 59.034 50.000 9.08 1.27 34.50 5.01
283 284 2.543037 TCACTATGTCCTAGGTGGCA 57.457 50.000 9.08 7.25 35.26 4.92
284 285 2.827755 TCACTATGTCCTAGGTGGCAA 58.172 47.619 9.08 0.00 35.26 4.52
285 286 3.178046 TCACTATGTCCTAGGTGGCAAA 58.822 45.455 9.08 0.00 35.26 3.68
287 288 4.227300 TCACTATGTCCTAGGTGGCAAATT 59.773 41.667 9.08 0.00 35.26 1.82
289 290 6.069905 TCACTATGTCCTAGGTGGCAAATTTA 60.070 38.462 9.08 0.00 35.26 1.40
290 291 6.038271 CACTATGTCCTAGGTGGCAAATTTAC 59.962 42.308 9.08 0.00 35.26 2.01
291 292 3.692690 TGTCCTAGGTGGCAAATTTACC 58.307 45.455 9.08 0.00 35.26 2.85
293 294 4.083565 GTCCTAGGTGGCAAATTTACCAA 58.916 43.478 11.84 0.00 37.79 3.67
294 295 4.082408 GTCCTAGGTGGCAAATTTACCAAC 60.082 45.833 16.58 16.58 44.45 3.77
296 297 3.744238 AGGTGGCAAATTTACCAACAC 57.256 42.857 24.37 12.47 46.66 3.32
298 299 2.549134 GGTGGCAAATTTACCAACACCC 60.549 50.000 18.95 9.37 43.52 4.61
301 302 3.007398 TGGCAAATTTACCAACACCCATC 59.993 43.478 7.73 0.00 31.46 3.51
302 303 3.260632 GGCAAATTTACCAACACCCATCT 59.739 43.478 2.30 0.00 0.00 2.90
303 304 4.262851 GGCAAATTTACCAACACCCATCTT 60.263 41.667 2.30 0.00 0.00 2.40
305 306 5.867174 GCAAATTTACCAACACCCATCTTAC 59.133 40.000 0.00 0.00 0.00 2.34
307 308 7.437748 CAAATTTACCAACACCCATCTTACAA 58.562 34.615 0.00 0.00 0.00 2.41
308 309 6.584185 ATTTACCAACACCCATCTTACAAC 57.416 37.500 0.00 0.00 0.00 3.32
309 310 3.876309 ACCAACACCCATCTTACAACT 57.124 42.857 0.00 0.00 0.00 3.16
310 311 3.486383 ACCAACACCCATCTTACAACTG 58.514 45.455 0.00 0.00 0.00 3.16
311 312 3.117663 ACCAACACCCATCTTACAACTGT 60.118 43.478 0.00 0.00 0.00 3.55
312 313 3.888930 CCAACACCCATCTTACAACTGTT 59.111 43.478 0.00 0.00 0.00 3.16
315 316 3.137544 ACACCCATCTTACAACTGTTGGA 59.862 43.478 23.15 13.57 34.12 3.53
317 318 4.582656 CACCCATCTTACAACTGTTGGAAA 59.417 41.667 23.15 15.54 31.97 3.13
318 319 5.243730 CACCCATCTTACAACTGTTGGAAAT 59.756 40.000 23.15 14.06 31.97 2.17
319 320 5.243730 ACCCATCTTACAACTGTTGGAAATG 59.756 40.000 23.15 21.95 31.97 2.32
320 321 5.163513 CCATCTTACAACTGTTGGAAATGC 58.836 41.667 23.15 0.00 31.97 3.56
326 327 4.159557 ACAACTGTTGGAAATGCCCTAAT 58.840 39.130 23.15 0.00 34.97 1.73
344 345 3.915437 AATAGGCAACCGACAACAAAG 57.085 42.857 0.00 0.00 37.17 2.77
355 356 3.303791 CCGACAACAAAGCAAAGGTACTC 60.304 47.826 0.00 0.00 38.49 2.59
433 435 0.034337 AGGCAAAACAAGGCATGCTG 59.966 50.000 18.92 11.66 38.79 4.41
956 3648 1.109323 GCACCTGACAAACCCTTGCT 61.109 55.000 0.00 0.00 35.84 3.91
958 3650 2.154462 CACCTGACAAACCCTTGCTAG 58.846 52.381 0.00 0.00 35.84 3.42
960 3652 1.545428 CCTGACAAACCCTTGCTAGCA 60.545 52.381 14.93 14.93 35.84 3.49
961 3653 2.229792 CTGACAAACCCTTGCTAGCAA 58.770 47.619 27.67 27.67 35.84 3.91
2241 4933 4.038042 TCGCCAACAACATAAAATCACCAA 59.962 37.500 0.00 0.00 0.00 3.67
2577 5272 6.313658 GCGATAACTGCATAATCCATATGTCA 59.686 38.462 1.24 0.00 42.89 3.58
2598 5293 3.857157 GGGATGCTAAACCCATCTACA 57.143 47.619 0.00 0.00 44.96 2.74
2800 5495 5.740569 GTGATTGTACTGTTTGCATGCATAG 59.259 40.000 23.37 20.96 0.00 2.23
2828 5523 1.662629 CAGCCATCAATCGAGACACAC 59.337 52.381 0.00 0.00 0.00 3.82
3031 5757 6.711277 ACTGTTATCCTTAAGAGCATGTCAA 58.289 36.000 3.36 0.00 33.15 3.18
3148 5875 6.094464 TCCATGCACTTTATTCATTCTGTCTG 59.906 38.462 0.00 0.00 0.00 3.51
3149 5876 6.094464 CCATGCACTTTATTCATTCTGTCTGA 59.906 38.462 0.00 0.00 0.00 3.27
3150 5877 7.362315 CCATGCACTTTATTCATTCTGTCTGAA 60.362 37.037 0.00 0.00 39.24 3.02
3151 5878 7.509141 TGCACTTTATTCATTCTGTCTGAAA 57.491 32.000 0.00 0.00 38.29 2.69
3152 5879 7.939782 TGCACTTTATTCATTCTGTCTGAAAA 58.060 30.769 0.00 0.00 38.29 2.29
3153 5880 8.412456 TGCACTTTATTCATTCTGTCTGAAAAA 58.588 29.630 0.00 0.00 38.29 1.94
3177 5904 8.721019 AAATGCGATATTGAAACCATGAAAAT 57.279 26.923 0.00 0.00 0.00 1.82
3242 5969 4.096984 GGACAATCTGTAAAGGATGCAAGG 59.903 45.833 0.00 0.00 0.00 3.61
3243 5970 4.922206 ACAATCTGTAAAGGATGCAAGGA 58.078 39.130 0.00 0.00 0.00 3.36
3244 5971 5.324409 ACAATCTGTAAAGGATGCAAGGAA 58.676 37.500 0.00 0.00 0.00 3.36
3246 5973 5.904362 ATCTGTAAAGGATGCAAGGAAAC 57.096 39.130 0.00 0.00 0.00 2.78
3251 5978 4.796038 AAAGGATGCAAGGAAACTCATG 57.204 40.909 0.00 0.00 42.68 3.07
3273 6000 5.132502 TGCTTCTCTGACTCCAAAAATTCA 58.867 37.500 0.00 0.00 0.00 2.57
3297 6024 9.349713 TCAGAAAAATTACCACACTGTAGAAAT 57.650 29.630 0.00 0.00 0.00 2.17
3432 6160 2.995258 CGCAAAATAAGCATGGCAAAGT 59.005 40.909 0.00 0.00 0.00 2.66
3449 6177 7.816640 TGGCAAAGTCTATACTTGACATTTTC 58.183 34.615 0.00 0.00 45.37 2.29
3525 6253 7.639113 AACAAAATAAAGTGACACTCCAAGA 57.361 32.000 8.93 0.00 0.00 3.02
3572 6300 8.641498 ATGAAAATATAGCCCCAAGTAAGATG 57.359 34.615 0.00 0.00 0.00 2.90
3576 6304 1.668826 AGCCCCAAGTAAGATGACCA 58.331 50.000 0.00 0.00 0.00 4.02
3692 6421 6.388689 TGGGCATTTCTAAGATTAGGGTCTTA 59.611 38.462 0.00 0.00 39.15 2.10
3723 6452 9.348476 TCCTTATTCTCCTCATATCGATATCTG 57.652 37.037 15.08 7.29 0.00 2.90
3777 6508 6.017400 ACTTAACGGAACTTCGTGAGATAA 57.983 37.500 0.00 0.00 43.07 1.75
3786 6517 7.587028 CGGAACTTCGTGAGATAAGTTAGTATC 59.413 40.741 0.00 0.00 43.97 2.24
3863 6597 3.684788 CACACAATGCCTACTGTACCTTC 59.315 47.826 0.00 0.00 0.00 3.46
3925 6659 7.940137 TGGAAACTAGGAAACAAGCAAACTATA 59.060 33.333 0.00 0.00 0.00 1.31
4036 6770 9.689501 AAAATTAGGATAACGTAGGGAATTTGA 57.310 29.630 0.00 0.00 0.00 2.69
4073 6808 9.185192 CCTGTAAAAACTTCAGATTAAAAGCAG 57.815 33.333 0.00 0.00 0.00 4.24
4084 6819 5.006386 AGATTAAAAGCAGGTTCCAGTGAG 58.994 41.667 0.00 0.00 0.00 3.51
4103 6838 5.656416 AGTGAGTTTTGAAAATTCCTGGACA 59.344 36.000 10.10 0.00 0.00 4.02
4126 6862 6.975772 ACATAGCGCAAAAGTTTCTGTTTTTA 59.024 30.769 11.47 0.00 0.00 1.52
4200 6938 6.852345 GGCACTTTATTGAAACAAAAGCAATG 59.148 34.615 0.00 0.00 34.31 2.82
4326 7067 5.936372 GCTAGGCATGATGAGTTCAATGATA 59.064 40.000 0.00 0.00 38.03 2.15
4335 7076 6.642540 TGATGAGTTCAATGATACTCGCATAC 59.357 38.462 15.45 8.88 42.88 2.39
4343 7084 9.710900 TTCAATGATACTCGCATACAAGATAAT 57.289 29.630 0.00 0.00 0.00 1.28
4555 7301 3.209410 CCACAAGCATATGTTCCTCTCC 58.791 50.000 4.29 0.00 0.00 3.71
4790 7538 8.902540 TTCTTTATACCATACATGTCATCACC 57.097 34.615 0.00 0.00 0.00 4.02
4791 7539 8.028652 TCTTTATACCATACATGTCATCACCA 57.971 34.615 0.00 0.00 0.00 4.17
4792 7540 8.659527 TCTTTATACCATACATGTCATCACCAT 58.340 33.333 0.00 0.00 0.00 3.55
4793 7541 9.942850 CTTTATACCATACATGTCATCACCATA 57.057 33.333 0.00 0.00 0.00 2.74
4797 7545 7.083062 ACCATACATGTCATCACCATAATCT 57.917 36.000 0.00 0.00 0.00 2.40
4798 7546 7.520798 ACCATACATGTCATCACCATAATCTT 58.479 34.615 0.00 0.00 0.00 2.40
4799 7547 7.663081 ACCATACATGTCATCACCATAATCTTC 59.337 37.037 0.00 0.00 0.00 2.87
4800 7548 7.662669 CCATACATGTCATCACCATAATCTTCA 59.337 37.037 0.00 0.00 0.00 3.02
4801 7549 9.227777 CATACATGTCATCACCATAATCTTCAT 57.772 33.333 0.00 0.00 0.00 2.57
4803 7551 8.843885 ACATGTCATCACCATAATCTTCATAG 57.156 34.615 0.00 0.00 0.00 2.23
4811 7559 9.664332 ATCACCATAATCTTCATAGATAGCAAC 57.336 33.333 0.00 0.00 40.26 4.17
4812 7560 8.874156 TCACCATAATCTTCATAGATAGCAACT 58.126 33.333 0.00 0.00 40.26 3.16
4813 7561 9.499479 CACCATAATCTTCATAGATAGCAACTT 57.501 33.333 0.00 0.00 40.26 2.66
4819 7567 8.798859 ATCTTCATAGATAGCAACTTTGTTGT 57.201 30.769 11.35 2.68 39.36 3.32
4820 7568 8.256611 TCTTCATAGATAGCAACTTTGTTGTC 57.743 34.615 11.35 0.89 31.48 3.18
4821 7569 7.877612 TCTTCATAGATAGCAACTTTGTTGTCA 59.122 33.333 11.35 1.61 33.24 3.58
4823 7571 9.665719 TTCATAGATAGCAACTTTGTTGTCATA 57.334 29.630 11.35 4.25 33.24 2.15
4824 7572 9.665719 TCATAGATAGCAACTTTGTTGTCATAA 57.334 29.630 11.35 0.44 33.24 1.90
4827 7575 8.565896 AGATAGCAACTTTGTTGTCATAATCA 57.434 30.769 11.35 0.00 33.24 2.57
4828 7576 9.013229 AGATAGCAACTTTGTTGTCATAATCAA 57.987 29.630 11.35 0.00 33.24 2.57
4829 7577 9.793252 GATAGCAACTTTGTTGTCATAATCAAT 57.207 29.630 11.35 0.00 31.63 2.57
4831 7579 8.301730 AGCAACTTTGTTGTCATAATCAATTG 57.698 30.769 11.35 0.00 0.00 2.32
4832 7580 8.143193 AGCAACTTTGTTGTCATAATCAATTGA 58.857 29.630 11.26 11.26 0.00 2.57
4836 7584 9.260002 ACTTTGTTGTCATAATCAATTGAAACC 57.740 29.630 13.09 0.00 0.00 3.27
4837 7585 9.480053 CTTTGTTGTCATAATCAATTGAAACCT 57.520 29.630 13.09 0.31 0.00 3.50
4839 7587 8.408043 TGTTGTCATAATCAATTGAAACCTCT 57.592 30.769 13.09 0.00 0.00 3.69
4840 7588 8.859090 TGTTGTCATAATCAATTGAAACCTCTT 58.141 29.630 13.09 3.60 0.00 2.85
4841 7589 9.346725 GTTGTCATAATCAATTGAAACCTCTTC 57.653 33.333 13.09 0.81 0.00 2.87
4842 7590 8.055279 TGTCATAATCAATTGAAACCTCTTCC 57.945 34.615 13.09 0.00 0.00 3.46
4844 7592 8.522830 GTCATAATCAATTGAAACCTCTTCCAA 58.477 33.333 13.09 0.00 0.00 3.53
4849 7597 9.933723 AATCAATTGAAACCTCTTCCAAAATAG 57.066 29.630 13.09 0.00 0.00 1.73
4851 7599 8.359642 TCAATTGAAACCTCTTCCAAAATAGTG 58.640 33.333 5.45 0.00 0.00 2.74
4853 7601 5.947663 TGAAACCTCTTCCAAAATAGTGGA 58.052 37.500 0.00 0.00 46.24 4.02
4919 8140 7.288389 AGGAGGCATGCTTTCATCATAATAAAA 59.712 33.333 18.92 0.00 0.00 1.52
5355 8629 1.227853 AACGGCGCCAGAAAAGACT 60.228 52.632 28.98 0.00 0.00 3.24
5494 8830 3.309296 GGGAGGTGTAGGATGAAGATGA 58.691 50.000 0.00 0.00 0.00 2.92
5795 9133 7.572546 TGGATCATATAATCATCCCTCAACA 57.427 36.000 0.00 0.00 36.03 3.33
5845 9183 7.952671 TCTTATCTAGCGGAGAACATAACAAT 58.047 34.615 0.00 0.00 37.85 2.71
5851 9189 9.391006 TCTAGCGGAGAACATAACAATAATTTT 57.609 29.630 0.00 0.00 0.00 1.82
6371 9719 8.316946 ACTCAATTCATCACAACAAGATAGAGA 58.683 33.333 0.00 0.00 0.00 3.10
6374 9722 5.604758 TCATCACAACAAGATAGAGAGGG 57.395 43.478 0.00 0.00 0.00 4.30
6375 9723 5.272402 TCATCACAACAAGATAGAGAGGGA 58.728 41.667 0.00 0.00 0.00 4.20
6431 9779 1.123217 CGCGATACATCAAGATCGTGC 59.877 52.381 0.00 0.00 45.64 5.34
6609 9974 4.215399 TCAAGATTGGTTTTTCGTGGCTAG 59.785 41.667 0.00 0.00 0.00 3.42
6836 10205 7.698130 GGGTGTTCTGATTCATAAAAATTCTCG 59.302 37.037 0.00 0.00 0.00 4.04
6873 10242 7.116233 GCTGTGTTTGAAATCCGTTTGATATTT 59.884 33.333 0.00 0.00 31.83 1.40
7420 10792 4.880537 AAGCGCTCGAGGATGCCG 62.881 66.667 12.06 9.78 0.00 5.69
7644 11017 0.323360 GGATGGCCAAGCAACCACTA 60.323 55.000 10.96 0.00 39.19 2.74
7750 11123 3.132824 ACAGCCACTACATGATCGATCAA 59.867 43.478 30.41 14.52 40.69 2.57
7755 11128 5.008019 GCCACTACATGATCGATCAACAAAT 59.992 40.000 30.41 12.26 40.69 2.32
7823 11196 1.208614 GTGGTTACGAGAGCGACGT 59.791 57.895 10.15 10.15 45.75 4.34
8015 11395 2.472695 TGTATGGGTTGCAGTGTCTC 57.527 50.000 0.00 0.00 0.00 3.36
8065 11445 3.774216 CCTGTCTCTTTTCCCTCTCATCT 59.226 47.826 0.00 0.00 0.00 2.90
8143 11599 9.511272 ACTAGTTATTAACCCCTTAGTGTTTTG 57.489 33.333 2.92 0.00 0.00 2.44
8186 11642 8.627208 ACATTCAAGACACTATTTTGATCAGT 57.373 30.769 0.00 0.00 31.54 3.41
8391 11883 1.613437 GCTTGTGTATTGGTGGCTGTT 59.387 47.619 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 1.062587 GATGCCGGTTCTCGATTTGTG 59.937 52.381 1.90 0.00 42.43 3.33
8 9 2.808206 GGGGATGCCGGTTCTCGAT 61.808 63.158 1.90 0.00 42.43 3.59
9 10 3.467226 GGGGATGCCGGTTCTCGA 61.467 66.667 1.90 0.00 42.43 4.04
10 11 2.608970 ATTGGGGATGCCGGTTCTCG 62.609 60.000 1.90 0.00 38.88 4.04
11 12 1.103398 CATTGGGGATGCCGGTTCTC 61.103 60.000 1.90 0.00 0.00 2.87
12 13 1.076777 CATTGGGGATGCCGGTTCT 60.077 57.895 1.90 0.00 0.00 3.01
13 14 1.077068 TCATTGGGGATGCCGGTTC 60.077 57.895 1.90 0.00 35.64 3.62
14 15 1.379843 GTCATTGGGGATGCCGGTT 60.380 57.895 1.90 0.00 35.64 4.44
15 16 2.275418 GTCATTGGGGATGCCGGT 59.725 61.111 1.90 0.00 35.64 5.28
16 17 2.519302 GGTCATTGGGGATGCCGG 60.519 66.667 0.00 0.00 35.64 6.13
19 20 1.140312 TAGGAGGTCATTGGGGATGC 58.860 55.000 0.00 0.00 35.64 3.91
20 21 2.107204 CCTTAGGAGGTCATTGGGGATG 59.893 54.545 0.00 0.00 38.32 3.51
22 23 1.628043 CCCTTAGGAGGTCATTGGGGA 60.628 57.143 0.00 0.00 41.85 4.81
23 24 0.846693 CCCTTAGGAGGTCATTGGGG 59.153 60.000 0.00 0.00 41.85 4.96
24 25 0.183731 GCCCTTAGGAGGTCATTGGG 59.816 60.000 0.00 0.00 41.85 4.12
25 26 0.918983 TGCCCTTAGGAGGTCATTGG 59.081 55.000 0.00 0.00 41.85 3.16
26 27 2.441001 AGATGCCCTTAGGAGGTCATTG 59.559 50.000 0.00 0.00 41.55 2.82
27 28 2.708325 GAGATGCCCTTAGGAGGTCATT 59.292 50.000 0.00 0.00 41.55 2.57
28 29 2.334023 GAGATGCCCTTAGGAGGTCAT 58.666 52.381 0.00 0.00 44.05 3.06
29 30 1.692762 GGAGATGCCCTTAGGAGGTCA 60.693 57.143 0.00 0.00 41.85 4.02
30 31 1.052617 GGAGATGCCCTTAGGAGGTC 58.947 60.000 0.00 0.00 41.85 3.85
31 32 0.343372 TGGAGATGCCCTTAGGAGGT 59.657 55.000 0.00 0.00 41.85 3.85
32 33 1.141858 GTTGGAGATGCCCTTAGGAGG 59.858 57.143 0.00 0.00 43.15 4.30
33 34 1.839994 TGTTGGAGATGCCCTTAGGAG 59.160 52.381 0.00 0.00 34.97 3.69
34 35 1.839994 CTGTTGGAGATGCCCTTAGGA 59.160 52.381 0.00 0.00 34.97 2.94
35 36 1.133976 CCTGTTGGAGATGCCCTTAGG 60.134 57.143 0.00 0.00 34.97 2.69
36 37 1.561542 ACCTGTTGGAGATGCCCTTAG 59.438 52.381 0.00 0.00 37.04 2.18
37 38 1.668826 ACCTGTTGGAGATGCCCTTA 58.331 50.000 0.00 0.00 37.04 2.69
38 39 0.779997 AACCTGTTGGAGATGCCCTT 59.220 50.000 0.00 0.00 37.04 3.95
39 40 0.038744 CAACCTGTTGGAGATGCCCT 59.961 55.000 2.03 0.00 36.95 5.19
40 41 0.251341 ACAACCTGTTGGAGATGCCC 60.251 55.000 14.05 0.00 44.45 5.36
41 42 2.489938 TACAACCTGTTGGAGATGCC 57.510 50.000 14.05 0.00 44.45 4.40
43 44 6.173339 ACTAACATACAACCTGTTGGAGATG 58.827 40.000 14.05 14.52 44.45 2.90
44 45 6.213600 AGACTAACATACAACCTGTTGGAGAT 59.786 38.462 14.05 2.53 44.45 2.75
45 46 5.542635 AGACTAACATACAACCTGTTGGAGA 59.457 40.000 14.05 0.34 44.45 3.71
46 47 5.794894 AGACTAACATACAACCTGTTGGAG 58.205 41.667 14.05 6.13 44.45 3.86
47 48 5.818678 AGACTAACATACAACCTGTTGGA 57.181 39.130 14.05 6.18 44.45 3.53
51 52 5.763204 CCAACAAGACTAACATACAACCTGT 59.237 40.000 0.00 0.00 0.00 4.00
54 55 7.733402 TTACCAACAAGACTAACATACAACC 57.267 36.000 0.00 0.00 0.00 3.77
56 57 9.344772 ACATTTACCAACAAGACTAACATACAA 57.655 29.630 0.00 0.00 0.00 2.41
57 58 8.911918 ACATTTACCAACAAGACTAACATACA 57.088 30.769 0.00 0.00 0.00 2.29
58 59 8.448615 GGACATTTACCAACAAGACTAACATAC 58.551 37.037 0.00 0.00 0.00 2.39
59 60 8.158132 TGGACATTTACCAACAAGACTAACATA 58.842 33.333 0.00 0.00 34.25 2.29
60 61 7.001674 TGGACATTTACCAACAAGACTAACAT 58.998 34.615 0.00 0.00 34.25 2.71
61 62 6.358178 TGGACATTTACCAACAAGACTAACA 58.642 36.000 0.00 0.00 34.25 2.41
65 66 5.385198 ACATGGACATTTACCAACAAGACT 58.615 37.500 0.00 0.00 40.93 3.24
66 67 5.240623 TGACATGGACATTTACCAACAAGAC 59.759 40.000 0.00 0.00 40.93 3.01
67 68 5.380900 TGACATGGACATTTACCAACAAGA 58.619 37.500 0.00 0.00 40.93 3.02
68 69 5.703978 TGACATGGACATTTACCAACAAG 57.296 39.130 0.00 0.00 40.93 3.16
69 70 5.772169 TGATGACATGGACATTTACCAACAA 59.228 36.000 0.00 0.00 40.93 2.83
70 71 5.320277 TGATGACATGGACATTTACCAACA 58.680 37.500 0.00 0.00 40.93 3.33
72 73 5.184864 GGTTGATGACATGGACATTTACCAA 59.815 40.000 20.67 13.40 40.93 3.67
74 75 4.704540 TGGTTGATGACATGGACATTTACC 59.295 41.667 19.78 19.78 34.81 2.85
78 79 4.151121 TGTTGGTTGATGACATGGACATT 58.849 39.130 0.00 0.00 0.00 2.71
79 80 3.765381 TGTTGGTTGATGACATGGACAT 58.235 40.909 7.24 7.24 0.00 3.06
80 81 3.220674 TGTTGGTTGATGACATGGACA 57.779 42.857 0.00 0.00 0.00 4.02
81 82 3.612479 GCTTGTTGGTTGATGACATGGAC 60.612 47.826 0.00 0.00 0.00 4.02
83 84 2.559668 AGCTTGTTGGTTGATGACATGG 59.440 45.455 0.00 0.00 0.00 3.66
84 85 3.928727 AGCTTGTTGGTTGATGACATG 57.071 42.857 0.00 0.00 0.00 3.21
85 86 5.255687 TGATAGCTTGTTGGTTGATGACAT 58.744 37.500 0.00 0.00 0.00 3.06
86 87 4.650734 TGATAGCTTGTTGGTTGATGACA 58.349 39.130 0.00 0.00 0.00 3.58
87 88 5.824904 ATGATAGCTTGTTGGTTGATGAC 57.175 39.130 0.00 0.00 0.00 3.06
88 89 6.413892 TGTATGATAGCTTGTTGGTTGATGA 58.586 36.000 0.00 0.00 0.00 2.92
89 90 6.682423 TGTATGATAGCTTGTTGGTTGATG 57.318 37.500 0.00 0.00 0.00 3.07
90 91 6.886459 AGTTGTATGATAGCTTGTTGGTTGAT 59.114 34.615 0.00 0.00 0.00 2.57
91 92 6.237901 AGTTGTATGATAGCTTGTTGGTTGA 58.762 36.000 0.00 0.00 0.00 3.18
92 93 6.500684 AGTTGTATGATAGCTTGTTGGTTG 57.499 37.500 0.00 0.00 0.00 3.77
93 94 7.394816 AGTAGTTGTATGATAGCTTGTTGGTT 58.605 34.615 0.00 0.00 0.00 3.67
94 95 6.947464 AGTAGTTGTATGATAGCTTGTTGGT 58.053 36.000 0.00 0.00 0.00 3.67
95 96 7.549134 TGAAGTAGTTGTATGATAGCTTGTTGG 59.451 37.037 0.00 0.00 0.00 3.77
96 97 8.479313 TGAAGTAGTTGTATGATAGCTTGTTG 57.521 34.615 0.00 0.00 0.00 3.33
98 99 9.102757 CATTGAAGTAGTTGTATGATAGCTTGT 57.897 33.333 0.00 0.00 0.00 3.16
99 100 8.554528 CCATTGAAGTAGTTGTATGATAGCTTG 58.445 37.037 0.00 0.00 0.00 4.01
101 102 7.147479 ACCCATTGAAGTAGTTGTATGATAGCT 60.147 37.037 0.00 0.00 0.00 3.32
102 103 6.992715 ACCCATTGAAGTAGTTGTATGATAGC 59.007 38.462 0.00 0.00 0.00 2.97
103 104 8.830580 CAACCCATTGAAGTAGTTGTATGATAG 58.169 37.037 0.00 0.00 38.15 2.08
104 105 8.325787 ACAACCCATTGAAGTAGTTGTATGATA 58.674 33.333 5.11 0.00 46.69 2.15
106 107 6.539173 ACAACCCATTGAAGTAGTTGTATGA 58.461 36.000 5.11 0.00 46.69 2.15
107 108 6.817765 ACAACCCATTGAAGTAGTTGTATG 57.182 37.500 5.11 0.00 46.69 2.39
111 112 6.817765 ACATACAACCCATTGAAGTAGTTG 57.182 37.500 0.00 0.00 42.67 3.16
112 113 7.120726 GCTTACATACAACCCATTGAAGTAGTT 59.879 37.037 0.00 0.00 39.30 2.24
113 114 6.598064 GCTTACATACAACCCATTGAAGTAGT 59.402 38.462 0.00 0.00 39.30 2.73
114 115 6.823689 AGCTTACATACAACCCATTGAAGTAG 59.176 38.462 0.00 0.00 39.30 2.57
115 116 6.717289 AGCTTACATACAACCCATTGAAGTA 58.283 36.000 0.00 0.00 39.30 2.24
116 117 5.570320 AGCTTACATACAACCCATTGAAGT 58.430 37.500 0.00 0.00 39.30 3.01
118 119 6.770785 GGATAGCTTACATACAACCCATTGAA 59.229 38.462 0.00 0.00 39.30 2.69
119 120 6.126623 TGGATAGCTTACATACAACCCATTGA 60.127 38.462 0.00 0.00 39.30 2.57
120 121 6.061441 TGGATAGCTTACATACAACCCATTG 58.939 40.000 0.00 0.00 41.98 2.82
121 122 6.260700 TGGATAGCTTACATACAACCCATT 57.739 37.500 0.00 0.00 0.00 3.16
122 123 5.904984 TGGATAGCTTACATACAACCCAT 57.095 39.130 0.00 0.00 0.00 4.00
123 124 5.427157 TCTTGGATAGCTTACATACAACCCA 59.573 40.000 0.00 0.00 0.00 4.51
124 125 5.925509 TCTTGGATAGCTTACATACAACCC 58.074 41.667 0.00 0.00 0.00 4.11
143 144 7.972277 CCACATTTATTTTCTCACCATCTCTTG 59.028 37.037 0.00 0.00 0.00 3.02
144 145 7.671398 ACCACATTTATTTTCTCACCATCTCTT 59.329 33.333 0.00 0.00 0.00 2.85
145 146 7.177878 ACCACATTTATTTTCTCACCATCTCT 58.822 34.615 0.00 0.00 0.00 3.10
146 147 7.396540 ACCACATTTATTTTCTCACCATCTC 57.603 36.000 0.00 0.00 0.00 2.75
147 148 7.605449 CAACCACATTTATTTTCTCACCATCT 58.395 34.615 0.00 0.00 0.00 2.90
148 149 6.311200 GCAACCACATTTATTTTCTCACCATC 59.689 38.462 0.00 0.00 0.00 3.51
149 150 6.014327 AGCAACCACATTTATTTTCTCACCAT 60.014 34.615 0.00 0.00 0.00 3.55
150 151 5.304101 AGCAACCACATTTATTTTCTCACCA 59.696 36.000 0.00 0.00 0.00 4.17
151 152 5.783111 AGCAACCACATTTATTTTCTCACC 58.217 37.500 0.00 0.00 0.00 4.02
152 153 6.681777 AGAGCAACCACATTTATTTTCTCAC 58.318 36.000 0.00 0.00 0.00 3.51
153 154 6.716628 AGAGAGCAACCACATTTATTTTCTCA 59.283 34.615 0.00 0.00 32.02 3.27
154 155 7.150783 AGAGAGCAACCACATTTATTTTCTC 57.849 36.000 0.00 0.00 0.00 2.87
156 157 9.860898 AAATAGAGAGCAACCACATTTATTTTC 57.139 29.630 0.00 0.00 0.00 2.29
157 158 9.860898 GAAATAGAGAGCAACCACATTTATTTT 57.139 29.630 0.00 0.00 0.00 1.82
158 159 9.023962 TGAAATAGAGAGCAACCACATTTATTT 57.976 29.630 0.00 0.00 0.00 1.40
159 160 8.579850 TGAAATAGAGAGCAACCACATTTATT 57.420 30.769 0.00 0.00 0.00 1.40
160 161 8.757982 ATGAAATAGAGAGCAACCACATTTAT 57.242 30.769 0.00 0.00 0.00 1.40
161 162 8.049117 AGATGAAATAGAGAGCAACCACATTTA 58.951 33.333 0.00 0.00 0.00 1.40
162 163 6.888632 AGATGAAATAGAGAGCAACCACATTT 59.111 34.615 0.00 0.00 0.00 2.32
165 166 5.426689 AGATGAAATAGAGAGCAACCACA 57.573 39.130 0.00 0.00 0.00 4.17
166 167 5.877012 TCAAGATGAAATAGAGAGCAACCAC 59.123 40.000 0.00 0.00 0.00 4.16
167 168 6.053632 TCAAGATGAAATAGAGAGCAACCA 57.946 37.500 0.00 0.00 0.00 3.67
168 169 6.458070 GCTTCAAGATGAAATAGAGAGCAACC 60.458 42.308 0.00 0.00 35.73 3.77
169 170 6.315891 AGCTTCAAGATGAAATAGAGAGCAAC 59.684 38.462 0.00 0.00 35.73 4.17
171 172 5.987098 AGCTTCAAGATGAAATAGAGAGCA 58.013 37.500 0.00 0.00 35.73 4.26
172 173 6.315891 ACAAGCTTCAAGATGAAATAGAGAGC 59.684 38.462 0.00 0.00 35.73 4.09
173 174 7.676807 GCACAAGCTTCAAGATGAAATAGAGAG 60.677 40.741 0.00 0.00 35.73 3.20
174 175 6.093219 GCACAAGCTTCAAGATGAAATAGAGA 59.907 38.462 0.00 0.00 35.73 3.10
175 176 6.128090 TGCACAAGCTTCAAGATGAAATAGAG 60.128 38.462 0.00 0.00 42.74 2.43
176 177 5.706833 TGCACAAGCTTCAAGATGAAATAGA 59.293 36.000 0.00 0.00 42.74 1.98
177 178 5.946298 TGCACAAGCTTCAAGATGAAATAG 58.054 37.500 0.00 0.00 42.74 1.73
178 179 5.963176 TGCACAAGCTTCAAGATGAAATA 57.037 34.783 0.00 0.00 42.74 1.40
179 180 4.859304 TGCACAAGCTTCAAGATGAAAT 57.141 36.364 0.00 0.00 42.74 2.17
181 182 4.500205 CCTTTGCACAAGCTTCAAGATGAA 60.500 41.667 0.00 0.00 42.74 2.57
184 185 2.961062 ACCTTTGCACAAGCTTCAAGAT 59.039 40.909 0.00 0.00 42.74 2.40
186 187 2.861935 CAACCTTTGCACAAGCTTCAAG 59.138 45.455 0.00 0.00 42.74 3.02
189 190 2.584492 ACAACCTTTGCACAAGCTTC 57.416 45.000 0.00 0.00 42.74 3.86
190 191 2.620242 CAACAACCTTTGCACAAGCTT 58.380 42.857 0.00 0.00 42.74 3.74
191 192 1.134729 CCAACAACCTTTGCACAAGCT 60.135 47.619 0.00 0.00 42.74 3.74
192 193 1.289276 CCAACAACCTTTGCACAAGC 58.711 50.000 0.00 0.00 42.57 4.01
194 195 4.537135 TTAACCAACAACCTTTGCACAA 57.463 36.364 0.00 0.00 0.00 3.33
195 196 4.404073 AGATTAACCAACAACCTTTGCACA 59.596 37.500 0.00 0.00 0.00 4.57
196 197 4.944048 AGATTAACCAACAACCTTTGCAC 58.056 39.130 0.00 0.00 0.00 4.57
197 198 5.594725 TGTAGATTAACCAACAACCTTTGCA 59.405 36.000 0.00 0.00 0.00 4.08
198 199 6.079424 TGTAGATTAACCAACAACCTTTGC 57.921 37.500 0.00 0.00 0.00 3.68
216 217 7.780271 TGGAGAGAGAGCAAAGTTATATGTAGA 59.220 37.037 0.00 0.00 0.00 2.59
217 218 7.865385 GTGGAGAGAGAGCAAAGTTATATGTAG 59.135 40.741 0.00 0.00 0.00 2.74
219 220 6.155221 TGTGGAGAGAGAGCAAAGTTATATGT 59.845 38.462 0.00 0.00 0.00 2.29
220 221 6.577103 TGTGGAGAGAGAGCAAAGTTATATG 58.423 40.000 0.00 0.00 0.00 1.78
224 225 5.489792 AATGTGGAGAGAGAGCAAAGTTA 57.510 39.130 0.00 0.00 0.00 2.24
225 226 4.363991 AATGTGGAGAGAGAGCAAAGTT 57.636 40.909 0.00 0.00 0.00 2.66
226 227 4.363991 AAATGTGGAGAGAGAGCAAAGT 57.636 40.909 0.00 0.00 0.00 2.66
227 228 6.998968 ATTAAATGTGGAGAGAGAGCAAAG 57.001 37.500 0.00 0.00 0.00 2.77
228 229 7.394016 TGTATTAAATGTGGAGAGAGAGCAAA 58.606 34.615 0.00 0.00 0.00 3.68
229 230 6.946340 TGTATTAAATGTGGAGAGAGAGCAA 58.054 36.000 0.00 0.00 0.00 3.91
230 231 6.544928 TGTATTAAATGTGGAGAGAGAGCA 57.455 37.500 0.00 0.00 0.00 4.26
231 232 6.073331 GCATGTATTAAATGTGGAGAGAGAGC 60.073 42.308 0.00 0.00 0.00 4.09
232 233 6.426328 GGCATGTATTAAATGTGGAGAGAGAG 59.574 42.308 0.00 0.00 0.00 3.20
233 234 6.126796 TGGCATGTATTAAATGTGGAGAGAGA 60.127 38.462 0.00 0.00 0.00 3.10
234 235 6.017605 GTGGCATGTATTAAATGTGGAGAGAG 60.018 42.308 0.00 0.00 0.00 3.20
237 238 5.504853 TGTGGCATGTATTAAATGTGGAGA 58.495 37.500 0.00 0.00 0.00 3.71
238 239 5.833406 TGTGGCATGTATTAAATGTGGAG 57.167 39.130 0.00 0.00 0.00 3.86
239 240 5.890419 TGATGTGGCATGTATTAAATGTGGA 59.110 36.000 0.00 0.00 0.00 4.02
240 241 6.146601 TGATGTGGCATGTATTAAATGTGG 57.853 37.500 0.00 0.00 0.00 4.17
241 242 7.380333 GTGATGATGTGGCATGTATTAAATGTG 59.620 37.037 0.00 0.00 0.00 3.21
242 243 7.286087 AGTGATGATGTGGCATGTATTAAATGT 59.714 33.333 0.00 0.00 0.00 2.71
243 244 7.654568 AGTGATGATGTGGCATGTATTAAATG 58.345 34.615 0.00 0.00 0.00 2.32
244 245 7.828508 AGTGATGATGTGGCATGTATTAAAT 57.171 32.000 0.00 0.00 0.00 1.40
245 246 8.785946 CATAGTGATGATGTGGCATGTATTAAA 58.214 33.333 0.00 0.00 34.73 1.52
247 248 7.452562 ACATAGTGATGATGTGGCATGTATTA 58.547 34.615 0.00 0.00 36.18 0.98
248 249 6.301486 ACATAGTGATGATGTGGCATGTATT 58.699 36.000 0.00 0.00 36.18 1.89
249 250 5.872963 ACATAGTGATGATGTGGCATGTAT 58.127 37.500 0.00 0.00 36.18 2.29
250 251 5.294734 ACATAGTGATGATGTGGCATGTA 57.705 39.130 0.00 0.00 36.18 2.29
252 253 3.501062 GGACATAGTGATGATGTGGCATG 59.499 47.826 0.00 0.00 37.65 4.06
254 255 2.773661 AGGACATAGTGATGATGTGGCA 59.226 45.455 0.00 0.00 37.65 4.92
255 256 3.482156 AGGACATAGTGATGATGTGGC 57.518 47.619 0.00 0.00 37.65 5.01
256 257 4.590647 ACCTAGGACATAGTGATGATGTGG 59.409 45.833 17.98 0.00 37.65 4.17
257 258 5.510349 CCACCTAGGACATAGTGATGATGTG 60.510 48.000 17.98 0.00 41.22 3.21
258 259 4.590647 CCACCTAGGACATAGTGATGATGT 59.409 45.833 17.98 0.00 41.22 3.06
259 260 4.562347 GCCACCTAGGACATAGTGATGATG 60.562 50.000 17.98 0.00 41.22 3.07
260 261 3.580458 GCCACCTAGGACATAGTGATGAT 59.420 47.826 17.98 0.00 41.22 2.45
261 262 2.965831 GCCACCTAGGACATAGTGATGA 59.034 50.000 17.98 0.00 41.22 2.92
262 263 2.700371 TGCCACCTAGGACATAGTGATG 59.300 50.000 17.98 0.00 41.22 3.07
263 264 3.046283 TGCCACCTAGGACATAGTGAT 57.954 47.619 17.98 0.00 41.22 3.06
264 265 2.543037 TGCCACCTAGGACATAGTGA 57.457 50.000 17.98 0.00 41.22 3.41
265 266 3.627395 TTTGCCACCTAGGACATAGTG 57.373 47.619 17.98 1.22 41.22 2.74
266 267 4.862641 AATTTGCCACCTAGGACATAGT 57.137 40.909 17.98 2.49 41.22 2.12
267 268 5.531287 GGTAAATTTGCCACCTAGGACATAG 59.469 44.000 17.98 0.00 41.22 2.23
268 269 5.044772 TGGTAAATTTGCCACCTAGGACATA 60.045 40.000 22.45 6.31 38.05 2.29
269 270 4.264172 TGGTAAATTTGCCACCTAGGACAT 60.264 41.667 22.45 0.00 38.05 3.06
270 271 3.074687 TGGTAAATTTGCCACCTAGGACA 59.925 43.478 22.45 7.83 38.05 4.02
273 274 3.829601 TGTTGGTAAATTTGCCACCTAGG 59.170 43.478 25.49 7.41 42.80 3.02
274 275 4.321675 GGTGTTGGTAAATTTGCCACCTAG 60.322 45.833 25.49 0.00 42.80 3.02
275 276 3.574826 GGTGTTGGTAAATTTGCCACCTA 59.425 43.478 25.49 10.46 42.80 3.08
276 277 2.367241 GGTGTTGGTAAATTTGCCACCT 59.633 45.455 25.49 0.00 42.80 4.00
277 278 2.549134 GGGTGTTGGTAAATTTGCCACC 60.549 50.000 25.49 21.94 42.80 4.61
278 279 2.103263 TGGGTGTTGGTAAATTTGCCAC 59.897 45.455 25.49 19.76 42.80 5.01
281 282 4.535526 AGATGGGTGTTGGTAAATTTGC 57.464 40.909 0.00 0.00 0.00 3.68
282 283 6.987386 TGTAAGATGGGTGTTGGTAAATTTG 58.013 36.000 0.00 0.00 0.00 2.32
283 284 7.289084 AGTTGTAAGATGGGTGTTGGTAAATTT 59.711 33.333 0.00 0.00 0.00 1.82
284 285 6.780522 AGTTGTAAGATGGGTGTTGGTAAATT 59.219 34.615 0.00 0.00 0.00 1.82
285 286 6.208599 CAGTTGTAAGATGGGTGTTGGTAAAT 59.791 38.462 0.00 0.00 0.00 1.40
287 288 5.067273 CAGTTGTAAGATGGGTGTTGGTAA 58.933 41.667 0.00 0.00 0.00 2.85
289 290 3.117663 ACAGTTGTAAGATGGGTGTTGGT 60.118 43.478 0.00 0.00 0.00 3.67
290 291 3.486383 ACAGTTGTAAGATGGGTGTTGG 58.514 45.455 0.00 0.00 0.00 3.77
291 292 4.261572 CCAACAGTTGTAAGATGGGTGTTG 60.262 45.833 12.42 5.51 41.79 3.33
293 294 3.137544 TCCAACAGTTGTAAGATGGGTGT 59.862 43.478 12.42 0.00 0.00 4.16
294 295 3.750371 TCCAACAGTTGTAAGATGGGTG 58.250 45.455 12.42 0.00 0.00 4.61
296 297 5.713025 CATTTCCAACAGTTGTAAGATGGG 58.287 41.667 12.42 0.00 0.00 4.00
298 299 5.163513 GGCATTTCCAACAGTTGTAAGATG 58.836 41.667 12.42 11.01 34.01 2.90
301 302 3.573967 AGGGCATTTCCAACAGTTGTAAG 59.426 43.478 12.42 0.00 36.21 2.34
302 303 3.571590 AGGGCATTTCCAACAGTTGTAA 58.428 40.909 12.42 6.55 36.21 2.41
303 304 3.237268 AGGGCATTTCCAACAGTTGTA 57.763 42.857 12.42 0.00 36.21 2.41
305 306 4.806640 ATTAGGGCATTTCCAACAGTTG 57.193 40.909 6.28 6.28 36.21 3.16
307 308 4.536765 CCTATTAGGGCATTTCCAACAGT 58.463 43.478 1.37 0.00 36.21 3.55
320 321 2.285977 GTTGTCGGTTGCCTATTAGGG 58.714 52.381 11.72 0.00 35.37 3.53
326 327 0.948678 GCTTTGTTGTCGGTTGCCTA 59.051 50.000 0.00 0.00 0.00 3.93
344 345 0.240145 GGTTTGCGGAGTACCTTTGC 59.760 55.000 3.52 0.00 0.00 3.68
382 383 1.094073 CAAAGAGCCGGCAGATCCTG 61.094 60.000 31.54 13.64 34.12 3.86
394 396 4.572795 GCCTAGTTCCATCTTACAAAGAGC 59.427 45.833 0.00 0.00 41.61 4.09
504 512 7.530426 AGTACGTAAAAAGGAGAACTAAGGA 57.470 36.000 0.00 0.00 0.00 3.36
507 515 6.381801 CCGAGTACGTAAAAAGGAGAACTAA 58.618 40.000 0.00 0.00 37.88 2.24
2241 4933 4.201891 CGCTCTCGTAACCACTTGTAGTAT 60.202 45.833 0.00 0.00 0.00 2.12
2577 5272 3.393687 TGTAGATGGGTTTAGCATCCCT 58.606 45.455 0.00 0.00 43.74 4.20
2763 5458 3.140325 ACAATCACAAACGGATGGAGT 57.860 42.857 0.00 0.00 0.00 3.85
2800 5495 3.009723 TCGATTGATGGCTGGAAAAGAC 58.990 45.455 0.00 0.00 0.00 3.01
2828 5523 4.047627 AGTTCCTGGGGTGAAAAATAGG 57.952 45.455 0.00 0.00 0.00 2.57
3150 5877 8.545229 TTTCATGGTTTCAATATCGCATTTTT 57.455 26.923 0.00 0.00 0.00 1.94
3151 5878 8.545229 TTTTCATGGTTTCAATATCGCATTTT 57.455 26.923 0.00 0.00 0.00 1.82
3152 5879 8.721019 ATTTTCATGGTTTCAATATCGCATTT 57.279 26.923 0.00 0.00 0.00 2.32
3153 5880 9.985730 ATATTTTCATGGTTTCAATATCGCATT 57.014 25.926 0.00 0.00 0.00 3.56
3161 5888 9.048446 GCTTGCATATATTTTCATGGTTTCAAT 57.952 29.630 0.00 0.00 0.00 2.57
3162 5889 8.039538 TGCTTGCATATATTTTCATGGTTTCAA 58.960 29.630 0.00 0.00 0.00 2.69
3163 5890 7.554211 TGCTTGCATATATTTTCATGGTTTCA 58.446 30.769 0.00 0.00 0.00 2.69
3164 5891 8.422973 TTGCTTGCATATATTTTCATGGTTTC 57.577 30.769 0.00 0.00 0.00 2.78
3165 5892 8.832521 CATTGCTTGCATATATTTTCATGGTTT 58.167 29.630 0.00 0.00 0.00 3.27
3166 5893 8.373048 CATTGCTTGCATATATTTTCATGGTT 57.627 30.769 0.00 0.00 0.00 3.67
3167 5894 7.956420 CATTGCTTGCATATATTTTCATGGT 57.044 32.000 0.00 0.00 0.00 3.55
3186 5913 9.286946 GATAGATTGCTCTTATATTTGCATTGC 57.713 33.333 0.46 0.46 35.27 3.56
3201 5928 7.930865 AGATTGTCCTGTTTAGATAGATTGCTC 59.069 37.037 0.00 0.00 0.00 4.26
3242 5969 3.932089 GGAGTCAGAGAAGCATGAGTTTC 59.068 47.826 0.00 0.00 35.45 2.78
3243 5970 3.326006 TGGAGTCAGAGAAGCATGAGTTT 59.674 43.478 0.00 0.00 0.00 2.66
3244 5971 2.902486 TGGAGTCAGAGAAGCATGAGTT 59.098 45.455 0.00 0.00 0.00 3.01
3246 5973 3.606595 TTGGAGTCAGAGAAGCATGAG 57.393 47.619 0.00 0.00 0.00 2.90
3251 5978 5.471456 TCTGAATTTTTGGAGTCAGAGAAGC 59.529 40.000 1.40 0.00 41.13 3.86
3297 6024 9.571810 CTTTGTGCACAATAAGCTATGATAAAA 57.428 29.630 31.48 10.77 35.55 1.52
3411 6139 2.995258 ACTTTGCCATGCTTATTTTGCG 59.005 40.909 0.00 0.00 0.00 4.85
3512 6240 5.757850 ATGAGTTTTTCTTGGAGTGTCAC 57.242 39.130 0.00 0.00 0.00 3.67
3517 6245 7.884877 TCACATGATATGAGTTTTTCTTGGAGT 59.115 33.333 0.00 0.00 0.00 3.85
3525 6253 8.267620 TCATTCGTCACATGATATGAGTTTTT 57.732 30.769 0.00 0.00 0.00 1.94
3572 6300 7.214467 TCTTTTGTCTCCAACATTATTGGTC 57.786 36.000 5.62 0.06 40.40 4.02
3576 6304 5.716703 CCCCTCTTTTGTCTCCAACATTATT 59.283 40.000 0.00 0.00 37.82 1.40
3635 6363 7.041098 CCCCAAGTTAATATTCAAGGAAGATCG 60.041 40.741 0.00 0.00 0.00 3.69
3674 6403 8.290277 AGGAGTGATAAGACCCTAATCTTAGAA 58.710 37.037 0.00 0.00 42.88 2.10
3675 6404 7.827787 AGGAGTGATAAGACCCTAATCTTAGA 58.172 38.462 0.00 0.00 42.88 2.10
3692 6421 7.178573 TCGATATGAGGAGAATAAGGAGTGAT 58.821 38.462 0.00 0.00 0.00 3.06
3723 6452 8.655092 TGTGATTGAACTTTTCATGTTTTTGTC 58.345 29.630 0.00 0.00 39.84 3.18
3802 6536 6.177610 TCTTGTCTTTGACAGTACCAAAGTT 58.822 36.000 17.32 0.00 46.30 2.66
3863 6597 9.806203 TTGCTCAATATAAATTGTGGAAATGAG 57.194 29.630 5.13 0.00 41.15 2.90
3900 6634 5.515797 AGTTTGCTTGTTTCCTAGTTTCC 57.484 39.130 0.00 0.00 0.00 3.13
3925 6659 8.872845 GTTTTTGACAGATTCTGTTTTCAATGT 58.127 29.630 19.88 0.00 45.44 2.71
3979 6713 6.614694 TTTTGGAGTAGCAGAAGTATGGTA 57.385 37.500 0.00 0.00 32.19 3.25
4057 6791 5.474876 ACTGGAACCTGCTTTTAATCTGAAG 59.525 40.000 0.00 0.00 0.00 3.02
4073 6808 5.753438 GGAATTTTCAAAACTCACTGGAACC 59.247 40.000 0.00 0.00 0.00 3.62
4084 6819 5.572896 CGCTATGTCCAGGAATTTTCAAAAC 59.427 40.000 0.00 0.00 0.00 2.43
4103 6838 6.975772 TGTAAAAACAGAAACTTTTGCGCTAT 59.024 30.769 9.73 0.00 31.96 2.97
4126 6862 8.321353 TGGATGATAGTTGACTTTAATCTGTGT 58.679 33.333 0.00 0.00 0.00 3.72
4135 6871 7.275920 GGATAGTGTGGATGATAGTTGACTTT 58.724 38.462 0.00 0.00 0.00 2.66
4237 6976 8.680001 CCAACACTTTTACCTACTGTTTTAGTT 58.320 33.333 0.00 0.00 40.89 2.24
4240 6979 7.118060 ACCCAACACTTTTACCTACTGTTTTA 58.882 34.615 0.00 0.00 0.00 1.52
4387 7129 5.270979 AGGAAGTGGGTTAGGCTTAAATT 57.729 39.130 0.00 0.00 0.00 1.82
4419 7161 7.718753 TCCCATAAATTGTTTGCTCACAAAATT 59.281 29.630 5.52 6.74 46.94 1.82
4528 7274 6.101150 AGAGGAACATATGCTTGTGGGTATTA 59.899 38.462 1.58 0.00 0.00 0.98
4535 7281 3.209410 GGGAGAGGAACATATGCTTGTG 58.791 50.000 1.58 0.00 0.00 3.33
4620 7367 6.879276 ATTTCTATGCTTGTGGATCATGAG 57.121 37.500 0.09 0.00 0.00 2.90
4737 7485 7.757941 TGATAACCATGAAACTTGTCATCAA 57.242 32.000 0.00 0.00 36.04 2.57
4767 7515 8.853077 ATGGTGATGACATGTATGGTATAAAG 57.147 34.615 0.00 0.00 0.00 1.85
4772 7520 8.206126 AGATTATGGTGATGACATGTATGGTA 57.794 34.615 0.00 0.00 0.00 3.25
4774 7522 7.662669 TGAAGATTATGGTGATGACATGTATGG 59.337 37.037 0.00 0.00 0.00 2.74
4775 7523 8.611654 TGAAGATTATGGTGATGACATGTATG 57.388 34.615 0.00 0.00 0.00 2.39
4777 7525 9.933723 CTATGAAGATTATGGTGATGACATGTA 57.066 33.333 0.00 0.00 0.00 2.29
4779 7527 9.668497 ATCTATGAAGATTATGGTGATGACATG 57.332 33.333 0.00 0.00 39.55 3.21
4782 7530 9.311916 GCTATCTATGAAGATTATGGTGATGAC 57.688 37.037 0.00 0.00 39.55 3.06
4783 7531 9.039165 TGCTATCTATGAAGATTATGGTGATGA 57.961 33.333 0.00 0.00 39.55 2.92
4784 7532 9.662947 TTGCTATCTATGAAGATTATGGTGATG 57.337 33.333 0.00 0.00 39.55 3.07
4786 7534 8.874156 AGTTGCTATCTATGAAGATTATGGTGA 58.126 33.333 0.00 0.00 39.55 4.02
4787 7535 9.499479 AAGTTGCTATCTATGAAGATTATGGTG 57.501 33.333 0.00 0.00 39.55 4.17
4793 7541 9.236006 ACAACAAAGTTGCTATCTATGAAGATT 57.764 29.630 9.60 0.00 39.55 2.40
4794 7542 8.798859 ACAACAAAGTTGCTATCTATGAAGAT 57.201 30.769 9.60 0.00 44.80 2.40
4795 7543 7.877612 TGACAACAAAGTTGCTATCTATGAAGA 59.122 33.333 9.60 0.00 35.80 2.87
4796 7544 8.032952 TGACAACAAAGTTGCTATCTATGAAG 57.967 34.615 9.60 0.00 0.00 3.02
4797 7545 7.977789 TGACAACAAAGTTGCTATCTATGAA 57.022 32.000 9.60 0.00 0.00 2.57
4798 7546 9.665719 TTATGACAACAAAGTTGCTATCTATGA 57.334 29.630 9.60 0.00 0.00 2.15
4801 7549 9.665719 TGATTATGACAACAAAGTTGCTATCTA 57.334 29.630 9.60 0.00 0.00 1.98
4803 7551 9.793252 ATTGATTATGACAACAAAGTTGCTATC 57.207 29.630 9.60 1.71 0.00 2.08
4806 7554 8.143193 TCAATTGATTATGACAACAAAGTTGCT 58.857 29.630 3.38 0.00 0.00 3.91
4811 7559 9.480053 AGGTTTCAATTGATTATGACAACAAAG 57.520 29.630 9.40 0.00 0.00 2.77
4812 7560 9.474920 GAGGTTTCAATTGATTATGACAACAAA 57.525 29.630 9.40 0.00 0.00 2.83
4813 7561 8.859090 AGAGGTTTCAATTGATTATGACAACAA 58.141 29.630 9.40 0.00 0.00 2.83
4814 7562 8.408043 AGAGGTTTCAATTGATTATGACAACA 57.592 30.769 9.40 0.00 0.00 3.33
4815 7563 9.346725 GAAGAGGTTTCAATTGATTATGACAAC 57.653 33.333 9.40 8.51 0.00 3.32
4818 7566 8.055279 TGGAAGAGGTTTCAATTGATTATGAC 57.945 34.615 9.40 3.82 0.00 3.06
4819 7567 8.648698 TTGGAAGAGGTTTCAATTGATTATGA 57.351 30.769 9.40 0.00 0.00 2.15
4820 7568 9.709495 TTTTGGAAGAGGTTTCAATTGATTATG 57.291 29.630 9.40 0.00 30.81 1.90
4823 7571 9.933723 CTATTTTGGAAGAGGTTTCAATTGATT 57.066 29.630 9.40 0.00 30.81 2.57
4824 7572 9.093458 ACTATTTTGGAAGAGGTTTCAATTGAT 57.907 29.630 9.40 0.00 30.81 2.57
4825 7573 8.359642 CACTATTTTGGAAGAGGTTTCAATTGA 58.640 33.333 3.38 3.38 30.81 2.57
4826 7574 7.599998 CCACTATTTTGGAAGAGGTTTCAATTG 59.400 37.037 0.00 0.00 39.24 2.32
4827 7575 7.508977 TCCACTATTTTGGAAGAGGTTTCAATT 59.491 33.333 0.00 0.00 43.04 2.32
4828 7576 7.010160 TCCACTATTTTGGAAGAGGTTTCAAT 58.990 34.615 0.00 0.00 43.04 2.57
4829 7577 6.369629 TCCACTATTTTGGAAGAGGTTTCAA 58.630 36.000 0.00 0.00 43.04 2.69
4830 7578 5.947663 TCCACTATTTTGGAAGAGGTTTCA 58.052 37.500 0.00 0.00 43.04 2.69
4853 7601 7.729124 ATTGATGAAAGTGGATTTGGAGAAT 57.271 32.000 0.00 0.00 0.00 2.40
4854 7602 8.827832 ATATTGATGAAAGTGGATTTGGAGAA 57.172 30.769 0.00 0.00 0.00 2.87
4855 7603 9.919416 TTATATTGATGAAAGTGGATTTGGAGA 57.081 29.630 0.00 0.00 0.00 3.71
4919 8140 6.211384 CAGTCCCCCAAGTTTTAATGAGAAAT 59.789 38.462 0.00 0.00 0.00 2.17
4928 8149 7.242359 TGATATTTTCAGTCCCCCAAGTTTTA 58.758 34.615 0.00 0.00 0.00 1.52
5092 8343 5.540911 TGGAAAGGAAAATTGTGCTCAATC 58.459 37.500 13.98 3.58 42.60 2.67
5211 8485 8.728088 TTGCAATCGAATCTTTTAGTTTCTTC 57.272 30.769 0.00 0.00 0.00 2.87
5355 8629 8.542497 AATAAAGTTGCGTAGTAGACATCAAA 57.458 30.769 0.00 0.00 0.00 2.69
5494 8830 5.513267 GGTTGTAGGGTTGTTTGAGAGAGAT 60.513 44.000 0.00 0.00 0.00 2.75
5538 8874 1.703411 ATTTGGTGTGTTGGGGACAG 58.297 50.000 0.00 0.00 44.54 3.51
6371 9719 4.047166 TGGATCATATGGTGTTTCTCCCT 58.953 43.478 2.13 0.00 0.00 4.20
6374 9722 9.950496 ATATAGTTGGATCATATGGTGTTTCTC 57.050 33.333 2.13 0.00 0.00 2.87
6431 9779 3.441922 TCTCTCTCGTGTTCTTGAGATGG 59.558 47.826 0.00 0.00 40.27 3.51
6650 10016 7.610580 TTGTCAAATATTCCAAAAACCCTCT 57.389 32.000 0.00 0.00 0.00 3.69
6695 10061 4.101448 CCTCGGTGGCCTCCCAAG 62.101 72.222 18.19 14.70 44.33 3.61
6696 10062 4.974438 ACCTCGGTGGCCTCCCAA 62.974 66.667 18.19 5.88 44.33 4.12
6836 10205 5.755330 TTCAAACACAGCGAAACTTTTTC 57.245 34.783 0.00 0.00 0.00 2.29
6921 10292 6.884832 TGGGACTAACCTATTGACATAGTTG 58.115 40.000 0.00 0.00 38.98 3.16
6922 10293 7.504926 TTGGGACTAACCTATTGACATAGTT 57.495 36.000 0.00 0.00 38.98 2.24
7235 10607 4.295119 GCACGTCGGGGTCAGTGT 62.295 66.667 0.00 0.00 36.99 3.55
7416 10788 2.759973 CCTAGAGGCTGGACGGCA 60.760 66.667 5.39 0.00 41.46 5.69
7452 10824 2.042162 AGGGTGTGCAATCCAGAAGATT 59.958 45.455 10.04 0.00 46.54 2.40
7644 11017 0.340208 CCCCACTCCTTACCCTCTCT 59.660 60.000 0.00 0.00 0.00 3.10
7755 11128 8.731605 TGTTGGCGAATAAATAATAAAGTGTCA 58.268 29.630 0.00 0.00 0.00 3.58
7786 11159 5.548406 ACCACTTGTAGTACTGGTGATTTC 58.452 41.667 20.00 0.00 0.00 2.17
7823 11196 2.936919 ACTCAGAACAGCCATCACAA 57.063 45.000 0.00 0.00 0.00 3.33
8015 11395 2.985896 ACCGTACATGTTTGAGGATGG 58.014 47.619 2.30 1.78 0.00 3.51
8065 11445 7.114754 AGATGGTTAAGAAGCTCAATGATCAA 58.885 34.615 0.00 0.00 0.00 2.57
8143 11599 7.654022 TGAATGTCCCTATATTTGAAAACCC 57.346 36.000 0.00 0.00 0.00 4.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.