Multiple sequence alignment - TraesCS1D01G030900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G030900 chr1D 100.000 6405 0 0 1 6405 12059537 12053133 0.000000e+00 11828.0
1 TraesCS1D01G030900 chr1D 85.008 3095 334 60 1803 4868 12032693 12029700 0.000000e+00 3025.0
2 TraesCS1D01G030900 chr1D 84.774 3113 344 58 1785 4868 12163055 12160044 0.000000e+00 3003.0
3 TraesCS1D01G030900 chr1D 89.719 2101 193 5 2709 4803 12006857 12004774 0.000000e+00 2662.0
4 TraesCS1D01G030900 chr1D 88.221 2012 231 1 2709 4714 12256347 12254336 0.000000e+00 2398.0
5 TraesCS1D01G030900 chr1D 87.657 1985 230 6 2742 4714 12143535 12141554 0.000000e+00 2294.0
6 TraesCS1D01G030900 chr1D 87.298 1984 234 11 2746 4714 12038955 12036975 0.000000e+00 2252.0
7 TraesCS1D01G030900 chr1D 87.052 2008 243 10 2713 4707 12296283 12294280 0.000000e+00 2252.0
8 TraesCS1D01G030900 chr1D 85.163 674 56 25 1563 2222 12013352 12012709 0.000000e+00 651.0
9 TraesCS1D01G030900 chr1D 79.255 940 116 47 5112 5988 12224007 12223084 3.330000e-162 582.0
10 TraesCS1D01G030900 chr1D 84.472 483 59 10 1805 2280 12223496 12223023 4.520000e-126 462.0
11 TraesCS1D01G030900 chr1D 81.157 605 72 21 1805 2377 12007887 12007293 1.270000e-121 448.0
12 TraesCS1D01G030900 chr1D 80.928 582 79 16 1851 2419 11972642 11972080 1.280000e-116 431.0
13 TraesCS1D01G030900 chr1D 88.506 348 24 6 1417 1764 12013689 12013358 2.150000e-109 407.0
14 TraesCS1D01G030900 chr1D 81.871 513 56 22 1881 2386 12053884 12053402 1.290000e-106 398.0
15 TraesCS1D01G030900 chr1D 81.871 513 56 22 5654 6136 12057657 12057152 1.290000e-106 398.0
16 TraesCS1D01G030900 chr1D 88.581 289 27 4 2422 2705 11971964 11971677 4.750000e-91 346.0
17 TraesCS1D01G030900 chr1D 76.167 814 92 46 5654 6403 11972608 11971833 1.030000e-87 335.0
18 TraesCS1D01G030900 chr1D 84.591 318 36 9 1417 1728 12290811 12290501 2.900000e-78 303.0
19 TraesCS1D01G030900 chr1D 90.604 149 12 2 5655 5802 12289719 12289572 5.070000e-46 196.0
20 TraesCS1D01G030900 chr1D 93.333 120 8 0 1528 1647 11975384 11975265 1.840000e-40 178.0
21 TraesCS1D01G030900 chr1D 85.000 160 17 4 1603 1761 12054088 12053935 8.600000e-34 156.0
22 TraesCS1D01G030900 chr1D 85.000 160 17 4 5450 5603 12057935 12057777 8.600000e-34 156.0
23 TraesCS1D01G030900 chr1D 89.600 125 8 2 6281 6405 12222828 12222709 3.090000e-33 154.0
24 TraesCS1D01G030900 chr1D 88.618 123 13 1 5451 5573 12290622 12290501 1.440000e-31 148.0
25 TraesCS1D01G030900 chr1D 86.916 107 14 0 5654 5760 11975027 11974921 3.140000e-23 121.0
26 TraesCS1D01G030900 chr1B 91.594 2177 163 10 2701 4868 17745743 17743578 0.000000e+00 2988.0
27 TraesCS1D01G030900 chr1B 88.637 2165 215 8 2709 4862 17737663 17735519 0.000000e+00 2606.0
28 TraesCS1D01G030900 chr1B 83.693 1067 119 27 1921 2970 17771422 17770394 0.000000e+00 955.0
29 TraesCS1D01G030900 chr1B 87.818 550 55 10 1881 2425 17746711 17746169 9.060000e-178 634.0
30 TraesCS1D01G030900 chr1B 79.846 779 82 36 5654 6379 17746711 17745955 3.450000e-137 499.0
31 TraesCS1D01G030900 chr1B 83.852 514 51 16 574 1066 60059814 60060316 1.630000e-125 460.0
32 TraesCS1D01G030900 chr1B 82.546 487 63 16 1864 2339 17783667 17783192 5.980000e-110 409.0
33 TraesCS1D01G030900 chr1B 86.765 340 36 8 5654 5988 17783650 17783315 2.820000e-98 370.0
34 TraesCS1D01G030900 chr1B 87.259 259 30 1 2419 2674 17746068 17745810 6.280000e-75 292.0
35 TraesCS1D01G030900 chr1B 80.150 267 32 10 2442 2701 17737965 17737713 5.100000e-41 180.0
36 TraesCS1D01G030900 chr1B 86.897 145 9 2 5356 5491 17771573 17771430 3.090000e-33 154.0
37 TraesCS1D01G030900 chr1B 88.136 118 14 0 1307 1424 60059525 60059408 2.410000e-29 141.0
38 TraesCS1D01G030900 chr1A 88.883 2015 215 2 2709 4714 14132412 14130398 0.000000e+00 2471.0
39 TraesCS1D01G030900 chr1A 87.123 1988 235 11 2742 4714 14084554 14082573 0.000000e+00 2233.0
40 TraesCS1D01G030900 chr1A 90.033 1515 90 15 4942 6405 14052896 14051392 0.000000e+00 1905.0
41 TraesCS1D01G030900 chr1A 78.426 1029 93 45 5458 6405 14056372 14055392 9.390000e-153 551.0
42 TraesCS1D01G030900 chr1A 86.525 423 37 14 1808 2222 14066102 14065692 1.270000e-121 448.0
43 TraesCS1D01G030900 chr1A 83.838 495 55 16 1803 2283 14078131 14077648 1.270000e-121 448.0
44 TraesCS1D01G030900 chr1A 81.930 570 56 23 1881 2430 14052173 14051631 7.620000e-119 438.0
45 TraesCS1D01G030900 chr1A 80.532 601 73 19 1801 2389 14056246 14055678 7.680000e-114 422.0
46 TraesCS1D01G030900 chr1A 82.422 512 52 21 575 1066 155145062 155145555 4.620000e-111 412.0
47 TraesCS1D01G030900 chr1A 86.957 345 27 6 1417 1761 14066662 14066336 7.840000e-99 372.0
48 TraesCS1D01G030900 chr1A 86.826 334 36 6 5654 5982 14133203 14132873 3.650000e-97 366.0
49 TraesCS1D01G030900 chr1A 91.053 190 11 6 65 250 14066835 14066648 1.070000e-62 252.0
50 TraesCS1D01G030900 chr1A 78.302 424 63 17 579 981 521897887 521898302 4.960000e-61 246.0
51 TraesCS1D01G030900 chr1A 80.233 344 28 13 6088 6405 14065638 14065309 8.360000e-54 222.0
52 TraesCS1D01G030900 chr1A 81.857 237 33 10 5112 5343 14079834 14079603 2.360000e-44 191.0
53 TraesCS1D01G030900 chr1A 77.650 349 41 17 1417 1761 14052539 14052224 1.840000e-40 178.0
54 TraesCS1D01G030900 chr1A 78.755 273 39 13 1169 1428 155217409 155217675 1.430000e-36 165.0
55 TraesCS1D01G030900 chr1A 81.443 194 24 9 59 247 14056659 14056473 1.440000e-31 148.0
56 TraesCS1D01G030900 chr1A 98.182 55 1 0 4885 4939 14053172 14053118 5.290000e-16 97.1
57 TraesCS1D01G030900 chr4A 84.180 512 55 13 574 1066 609138090 609137586 2.090000e-129 473.0
58 TraesCS1D01G030900 chr2B 82.846 513 55 21 575 1067 110469113 110469612 4.590000e-116 429.0
59 TraesCS1D01G030900 chr2B 82.150 521 63 16 567 1066 708359227 708359738 2.760000e-113 420.0
60 TraesCS1D01G030900 chr2B 86.179 246 22 9 826 1065 66488327 66488088 8.240000e-64 255.0
61 TraesCS1D01G030900 chr2B 86.122 245 23 8 826 1065 66489575 66489337 2.960000e-63 254.0
62 TraesCS1D01G030900 chr2B 85.714 245 24 8 826 1065 66487698 66487460 1.380000e-61 248.0
63 TraesCS1D01G030900 chr2B 85.463 227 20 8 846 1065 66491433 66491213 2.320000e-54 224.0
64 TraesCS1D01G030900 chr2B 85.185 162 15 5 1265 1426 708380732 708380884 2.390000e-34 158.0
65 TraesCS1D01G030900 chr2B 87.611 113 14 0 1307 1419 545247899 545247787 1.450000e-26 132.0
66 TraesCS1D01G030900 chr6A 82.794 494 62 11 575 1052 98892375 98892861 2.760000e-113 420.0
67 TraesCS1D01G030900 chr3D 80.469 512 71 16 575 1066 423832646 423833148 1.310000e-96 364.0
68 TraesCS1D01G030900 chr3D 80.533 488 61 24 579 1047 75980230 75979758 1.710000e-90 344.0
69 TraesCS1D01G030900 chr2D 88.546 227 15 8 846 1066 37985832 37985611 1.370000e-66 265.0
70 TraesCS1D01G030900 chr2D 86.420 162 13 5 1265 1426 586900465 586900617 1.100000e-37 169.0
71 TraesCS1D01G030900 chr2D 85.586 111 16 0 1296 1406 648292998 648293108 4.060000e-22 117.0
72 TraesCS1D01G030900 chr2A 87.111 225 17 9 846 1064 42838177 42837959 1.780000e-60 244.0
73 TraesCS1D01G030900 chr2A 87.111 225 18 8 846 1064 42931468 42931249 1.780000e-60 244.0
74 TraesCS1D01G030900 chr2A 87.111 225 18 8 846 1064 42961482 42961263 1.780000e-60 244.0
75 TraesCS1D01G030900 chr2A 87.111 225 18 8 846 1064 43005157 43004938 1.780000e-60 244.0
76 TraesCS1D01G030900 chr7A 85.246 122 17 1 1304 1424 545478807 545478928 2.420000e-24 124.0
77 TraesCS1D01G030900 chr4B 85.185 81 12 0 1346 1426 535098792 535098712 4.120000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G030900 chr1D 12053133 12059537 6404 True 11828.000000 11828 100.000000 1 6405 1 chr1D.!!$R3 6404
1 TraesCS1D01G030900 chr1D 12029700 12032693 2993 True 3025.000000 3025 85.008000 1803 4868 1 chr1D.!!$R1 3065
2 TraesCS1D01G030900 chr1D 12160044 12163055 3011 True 3003.000000 3003 84.774000 1785 4868 1 chr1D.!!$R5 3083
3 TraesCS1D01G030900 chr1D 12254336 12256347 2011 True 2398.000000 2398 88.221000 2709 4714 1 chr1D.!!$R6 2005
4 TraesCS1D01G030900 chr1D 12141554 12143535 1981 True 2294.000000 2294 87.657000 2742 4714 1 chr1D.!!$R4 1972
5 TraesCS1D01G030900 chr1D 12036975 12038955 1980 True 2252.000000 2252 87.298000 2746 4714 1 chr1D.!!$R2 1968
6 TraesCS1D01G030900 chr1D 12004774 12007887 3113 True 1555.000000 2662 85.438000 1805 4803 2 chr1D.!!$R8 2998
7 TraesCS1D01G030900 chr1D 12289572 12296283 6711 True 724.750000 2252 87.716250 1417 5802 4 chr1D.!!$R12 4385
8 TraesCS1D01G030900 chr1D 12012709 12013689 980 True 529.000000 651 86.834500 1417 2222 2 chr1D.!!$R9 805
9 TraesCS1D01G030900 chr1D 12222709 12224007 1298 True 399.333333 582 84.442333 1805 6405 3 chr1D.!!$R11 4600
10 TraesCS1D01G030900 chr1D 11971677 11975384 3707 True 282.200000 431 85.185000 1528 6403 5 chr1D.!!$R7 4875
11 TraesCS1D01G030900 chr1D 12053402 12057935 4533 True 277.000000 398 83.435500 1603 6136 4 chr1D.!!$R10 4533
12 TraesCS1D01G030900 chr1B 17735519 17737965 2446 True 1393.000000 2606 84.393500 2442 4862 2 chr1B.!!$R2 2420
13 TraesCS1D01G030900 chr1B 17743578 17746711 3133 True 1103.250000 2988 86.629250 1881 6379 4 chr1B.!!$R3 4498
14 TraesCS1D01G030900 chr1B 17770394 17771573 1179 True 554.500000 955 85.295000 1921 5491 2 chr1B.!!$R4 3570
15 TraesCS1D01G030900 chr1B 60059814 60060316 502 False 460.000000 460 83.852000 574 1066 1 chr1B.!!$F1 492
16 TraesCS1D01G030900 chr1A 14130398 14133203 2805 True 1418.500000 2471 87.854500 2709 5982 2 chr1A.!!$R4 3273
17 TraesCS1D01G030900 chr1A 14077648 14084554 6906 True 957.333333 2233 84.272667 1803 5343 3 chr1A.!!$R3 3540
18 TraesCS1D01G030900 chr1A 14051392 14056659 5267 True 534.157143 1905 84.028000 59 6405 7 chr1A.!!$R1 6346
19 TraesCS1D01G030900 chr1A 14065309 14066835 1526 True 323.500000 448 86.192000 65 6405 4 chr1A.!!$R2 6340
20 TraesCS1D01G030900 chr4A 609137586 609138090 504 True 473.000000 473 84.180000 574 1066 1 chr4A.!!$R1 492
21 TraesCS1D01G030900 chr2B 708359227 708359738 511 False 420.000000 420 82.150000 567 1066 1 chr2B.!!$F2 499
22 TraesCS1D01G030900 chr2B 66487460 66491433 3973 True 245.250000 255 85.869500 826 1065 4 chr2B.!!$R2 239
23 TraesCS1D01G030900 chr3D 423832646 423833148 502 False 364.000000 364 80.469000 575 1066 1 chr3D.!!$F1 491

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
457 460 0.034616 AGTTCAGGAGCTGCTGTGAC 59.965 55.0 31.17 27.71 0.00 3.67 F
1323 4242 0.037590 AAGGAGGCACCGTATTTGCA 59.962 50.0 0.00 0.00 42.12 4.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1372 4291 0.029300 CTTGCACGGTCAGTTTGGTG 59.971 55.000 0.0 0.0 0.0 4.17 R
5915 15271 3.168292 TCAGATCCAGTGCTTTGAGAGA 58.832 45.455 0.0 0.0 0.0 3.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 7.227314 TCACATATACATGACCAATCTCAAAGC 59.773 37.037 0.00 0.00 35.96 3.51
41 42 2.086869 CATGACCAATCTCAAAGCCGT 58.913 47.619 0.00 0.00 0.00 5.68
43 44 3.410631 TGACCAATCTCAAAGCCGTTA 57.589 42.857 0.00 0.00 0.00 3.18
46 47 4.873827 TGACCAATCTCAAAGCCGTTATAC 59.126 41.667 0.00 0.00 0.00 1.47
47 48 3.869246 ACCAATCTCAAAGCCGTTATACG 59.131 43.478 0.00 0.00 42.11 3.06
49 50 4.750098 CCAATCTCAAAGCCGTTATACGAT 59.250 41.667 0.05 0.00 46.05 3.73
54 55 4.362279 TCAAAGCCGTTATACGATACCAC 58.638 43.478 0.05 0.00 46.05 4.16
56 57 5.299028 TCAAAGCCGTTATACGATACCACTA 59.701 40.000 0.05 0.00 46.05 2.74
61 62 5.319139 CCGTTATACGATACCACTATCACG 58.681 45.833 0.05 0.00 46.05 4.35
68 69 4.042398 CGATACCACTATCACGGTGAAAG 58.958 47.826 15.72 5.35 36.69 2.62
268 271 8.304596 TGCTTCTATGAGTTAATTATACCGGAG 58.695 37.037 9.46 0.00 0.00 4.63
282 285 2.544726 CGGAGGTGCTTCAACTTCC 58.455 57.895 0.00 0.00 41.67 3.46
287 290 0.877743 GGTGCTTCAACTTCCTCTGC 59.122 55.000 0.00 0.00 0.00 4.26
288 291 1.597742 GTGCTTCAACTTCCTCTGCA 58.402 50.000 0.00 0.00 0.00 4.41
293 296 2.533266 TCAACTTCCTCTGCACAGTC 57.467 50.000 0.00 0.00 0.00 3.51
295 298 2.141517 CAACTTCCTCTGCACAGTCAG 58.858 52.381 0.00 0.00 35.46 3.51
300 303 3.667497 TCCTCTGCACAGTCAGTTTAG 57.333 47.619 0.00 0.00 35.63 1.85
301 304 2.965831 TCCTCTGCACAGTCAGTTTAGT 59.034 45.455 0.00 0.00 35.63 2.24
311 314 7.016361 CACAGTCAGTTTAGTGCTTAAAGTT 57.984 36.000 0.00 0.00 33.58 2.66
312 315 6.907212 CACAGTCAGTTTAGTGCTTAAAGTTG 59.093 38.462 0.00 0.00 33.58 3.16
316 319 9.169592 AGTCAGTTTAGTGCTTAAAGTTGTAAA 57.830 29.630 0.00 0.00 33.58 2.01
317 320 9.434559 GTCAGTTTAGTGCTTAAAGTTGTAAAG 57.565 33.333 0.00 0.00 33.58 1.85
324 327 8.671384 AGTGCTTAAAGTTGTAAAGTACATGA 57.329 30.769 0.00 0.00 38.02 3.07
325 328 9.116067 AGTGCTTAAAGTTGTAAAGTACATGAA 57.884 29.630 0.00 0.00 38.02 2.57
327 330 9.724839 TGCTTAAAGTTGTAAAGTACATGAAAC 57.275 29.630 0.00 0.00 38.68 2.78
328 331 9.177304 GCTTAAAGTTGTAAAGTACATGAAACC 57.823 33.333 0.00 0.00 38.68 3.27
331 334 7.875327 AAGTTGTAAAGTACATGAAACCAGT 57.125 32.000 0.00 0.00 38.68 4.00
332 335 7.259290 AGTTGTAAAGTACATGAAACCAGTG 57.741 36.000 0.00 0.00 38.68 3.66
340 343 2.146342 CATGAAACCAGTGCTCGAACT 58.854 47.619 0.00 0.00 0.00 3.01
342 345 1.939934 TGAAACCAGTGCTCGAACTTG 59.060 47.619 0.00 0.00 0.00 3.16
344 347 1.583054 AACCAGTGCTCGAACTTGTC 58.417 50.000 0.00 0.00 0.00 3.18
346 349 1.284982 CCAGTGCTCGAACTTGTCCG 61.285 60.000 0.00 0.00 0.00 4.79
348 351 0.387929 AGTGCTCGAACTTGTCCGAA 59.612 50.000 0.00 0.00 34.17 4.30
351 354 1.270094 TGCTCGAACTTGTCCGAATGT 60.270 47.619 0.00 0.00 34.17 2.71
352 355 1.126846 GCTCGAACTTGTCCGAATGTG 59.873 52.381 0.00 0.00 34.17 3.21
353 356 1.126846 CTCGAACTTGTCCGAATGTGC 59.873 52.381 0.00 0.00 34.17 4.57
355 358 1.262950 CGAACTTGTCCGAATGTGCAA 59.737 47.619 0.00 0.00 0.00 4.08
359 362 4.419522 ACTTGTCCGAATGTGCAAATAC 57.580 40.909 0.00 0.00 0.00 1.89
360 363 3.120338 ACTTGTCCGAATGTGCAAATACG 60.120 43.478 0.00 0.00 0.00 3.06
364 367 2.031560 TCCGAATGTGCAAATACGATGC 59.968 45.455 0.00 0.00 44.08 3.91
367 370 3.621794 GAATGTGCAAATACGATGCCTC 58.378 45.455 0.00 0.00 43.16 4.70
369 372 1.339535 TGTGCAAATACGATGCCTCCA 60.340 47.619 0.00 0.00 43.16 3.86
370 373 1.949525 GTGCAAATACGATGCCTCCAT 59.050 47.619 0.00 0.00 43.16 3.41
372 375 3.023119 TGCAAATACGATGCCTCCATTT 58.977 40.909 0.00 0.00 43.16 2.32
373 376 3.181488 TGCAAATACGATGCCTCCATTTG 60.181 43.478 14.32 14.32 43.16 2.32
374 377 3.181487 GCAAATACGATGCCTCCATTTGT 60.181 43.478 17.37 0.79 38.34 2.83
377 380 6.373779 CAAATACGATGCCTCCATTTGTATC 58.626 40.000 12.05 0.00 34.74 2.24
379 382 3.470709 ACGATGCCTCCATTTGTATCTG 58.529 45.455 0.00 0.00 0.00 2.90
380 383 2.810274 CGATGCCTCCATTTGTATCTGG 59.190 50.000 0.00 0.00 0.00 3.86
382 385 4.464008 GATGCCTCCATTTGTATCTGGAA 58.536 43.478 0.00 0.00 40.92 3.53
384 387 4.209538 TGCCTCCATTTGTATCTGGAATG 58.790 43.478 0.00 0.00 40.92 2.67
385 388 4.210331 GCCTCCATTTGTATCTGGAATGT 58.790 43.478 0.00 0.00 40.92 2.71
389 392 6.933521 CCTCCATTTGTATCTGGAATGTCTAG 59.066 42.308 0.00 0.00 40.92 2.43
390 393 6.291377 TCCATTTGTATCTGGAATGTCTAGC 58.709 40.000 0.00 0.00 38.59 3.42
398 401 1.134007 TGGAATGTCTAGCCTGCATGG 60.134 52.381 0.00 0.00 39.35 3.66
402 405 0.036105 TGTCTAGCCTGCATGGTGTG 60.036 55.000 3.77 0.00 38.35 3.82
423 426 1.683365 AGCATGGCATTGACCCACC 60.683 57.895 0.00 0.00 34.68 4.61
424 427 1.683365 GCATGGCATTGACCCACCT 60.683 57.895 0.00 0.00 34.68 4.00
425 428 1.952102 GCATGGCATTGACCCACCTG 61.952 60.000 0.00 0.00 34.68 4.00
426 429 0.612732 CATGGCATTGACCCACCTGT 60.613 55.000 0.00 0.00 34.68 4.00
429 432 0.962356 GGCATTGACCCACCTGTCAG 60.962 60.000 0.00 0.00 45.37 3.51
431 434 1.527034 CATTGACCCACCTGTCAGTG 58.473 55.000 0.00 2.92 45.37 3.66
437 440 2.047844 CACCTGTCAGTGGCGGAG 60.048 66.667 4.74 0.00 33.95 4.63
438 441 2.203640 ACCTGTCAGTGGCGGAGA 60.204 61.111 4.74 0.00 0.00 3.71
440 443 2.279069 CCTGTCAGTGGCGGAGAGT 61.279 63.158 4.74 0.00 0.00 3.24
442 445 0.389166 CTGTCAGTGGCGGAGAGTTC 60.389 60.000 0.00 0.00 0.00 3.01
444 447 0.389166 GTCAGTGGCGGAGAGTTCAG 60.389 60.000 0.00 0.00 0.00 3.02
445 448 1.079543 CAGTGGCGGAGAGTTCAGG 60.080 63.158 0.00 0.00 0.00 3.86
448 451 2.185608 GGCGGAGAGTTCAGGAGC 59.814 66.667 0.00 0.00 0.00 4.70
449 452 2.355193 GGCGGAGAGTTCAGGAGCT 61.355 63.158 0.00 0.00 0.00 4.09
453 456 0.108233 GGAGAGTTCAGGAGCTGCTG 60.108 60.000 27.83 27.83 0.00 4.41
457 460 0.034616 AGTTCAGGAGCTGCTGTGAC 59.965 55.000 31.17 27.71 0.00 3.67
458 461 0.952984 GTTCAGGAGCTGCTGTGACC 60.953 60.000 31.17 15.53 0.00 4.02
461 464 2.046507 GGAGCTGCTGTGACCTGG 60.047 66.667 7.01 0.00 0.00 4.45
463 466 4.341783 AGCTGCTGTGACCTGGGC 62.342 66.667 0.00 0.00 0.00 5.36
477 480 1.586154 CTGGGCGCGTGAGGATTTTT 61.586 55.000 8.43 0.00 0.00 1.94
561 564 2.740714 GCATGACGCAGGACCGAAC 61.741 63.158 0.00 0.00 41.79 3.95
562 565 2.100631 CATGACGCAGGACCGAACC 61.101 63.158 0.00 0.00 0.00 3.62
563 566 3.642778 ATGACGCAGGACCGAACCG 62.643 63.158 0.00 0.00 34.73 4.44
571 574 1.812507 GGACCGAACCGTGCCATAC 60.813 63.158 0.00 0.00 0.00 2.39
572 575 1.217244 GACCGAACCGTGCCATACT 59.783 57.895 0.00 0.00 0.00 2.12
614 620 0.518636 CTTTGGAGCACGGACACATG 59.481 55.000 0.00 0.00 0.00 3.21
615 621 0.107643 TTTGGAGCACGGACACATGA 59.892 50.000 0.00 0.00 0.00 3.07
650 658 5.273170 TGCGAAGTTCAAAGAAACAGATTG 58.727 37.500 3.32 0.00 0.00 2.67
870 2528 5.991328 TTTGAAAGTCACTTAGAGCACAG 57.009 39.130 0.00 0.00 0.00 3.66
942 3860 1.815003 AGGTTTTAGCATGCTCAGTGC 59.185 47.619 26.57 11.72 42.81 4.40
981 3899 1.062002 CCGCTTTGGTTGCTATGTACG 59.938 52.381 0.00 0.00 0.00 3.67
989 3907 3.991773 TGGTTGCTATGTACGTCTTCAAC 59.008 43.478 13.97 13.97 33.61 3.18
1043 3961 5.984323 GGACCCGCACAAGTTTTATTTTAAA 59.016 36.000 0.00 0.00 0.00 1.52
1068 3987 9.967245 AAATTTTCAAGTTCTTTAGTTTTTCGC 57.033 25.926 0.00 0.00 0.00 4.70
1069 3988 8.926715 ATTTTCAAGTTCTTTAGTTTTTCGCT 57.073 26.923 0.00 0.00 0.00 4.93
1070 3989 8.751302 TTTTCAAGTTCTTTAGTTTTTCGCTT 57.249 26.923 0.00 0.00 0.00 4.68
1071 3990 8.751302 TTTCAAGTTCTTTAGTTTTTCGCTTT 57.249 26.923 0.00 0.00 0.00 3.51
1072 3991 7.734538 TCAAGTTCTTTAGTTTTTCGCTTTG 57.265 32.000 0.00 0.00 0.00 2.77
1073 3992 6.750039 TCAAGTTCTTTAGTTTTTCGCTTTGG 59.250 34.615 0.00 0.00 0.00 3.28
1074 3993 5.041287 AGTTCTTTAGTTTTTCGCTTTGGC 58.959 37.500 0.00 0.00 0.00 4.52
1075 3994 4.640789 TCTTTAGTTTTTCGCTTTGGCA 57.359 36.364 0.00 0.00 38.60 4.92
1076 3995 5.000012 TCTTTAGTTTTTCGCTTTGGCAA 58.000 34.783 0.00 0.00 38.60 4.52
1077 3996 5.596845 TCTTTAGTTTTTCGCTTTGGCAAT 58.403 33.333 0.00 0.00 38.60 3.56
1078 3997 5.461737 TCTTTAGTTTTTCGCTTTGGCAATG 59.538 36.000 0.00 4.50 38.60 2.82
1079 3998 3.177997 AGTTTTTCGCTTTGGCAATGT 57.822 38.095 13.79 0.00 38.60 2.71
1080 3999 2.865551 AGTTTTTCGCTTTGGCAATGTG 59.134 40.909 17.69 17.69 38.60 3.21
1081 4000 2.593346 TTTTCGCTTTGGCAATGTGT 57.407 40.000 21.40 0.00 38.60 3.72
1082 4001 3.717400 TTTTCGCTTTGGCAATGTGTA 57.283 38.095 21.40 12.64 38.60 2.90
1083 4002 3.932545 TTTCGCTTTGGCAATGTGTAT 57.067 38.095 21.40 0.00 38.60 2.29
1084 4003 3.932545 TTCGCTTTGGCAATGTGTATT 57.067 38.095 21.40 0.00 38.60 1.89
1085 4004 3.932545 TCGCTTTGGCAATGTGTATTT 57.067 38.095 21.40 0.00 38.60 1.40
1086 4005 3.573598 TCGCTTTGGCAATGTGTATTTG 58.426 40.909 21.40 3.30 38.60 2.32
1087 4006 3.254411 TCGCTTTGGCAATGTGTATTTGA 59.746 39.130 21.40 3.68 38.60 2.69
1088 4007 3.364621 CGCTTTGGCAATGTGTATTTGAC 59.635 43.478 16.08 0.00 38.60 3.18
1089 4008 4.305769 GCTTTGGCAATGTGTATTTGACA 58.694 39.130 13.79 0.00 38.54 3.58
1090 4009 4.749099 GCTTTGGCAATGTGTATTTGACAA 59.251 37.500 13.79 0.72 37.92 3.18
1091 4010 5.409214 GCTTTGGCAATGTGTATTTGACAAT 59.591 36.000 13.79 0.00 37.92 2.71
1092 4011 6.589523 GCTTTGGCAATGTGTATTTGACAATA 59.410 34.615 13.79 0.00 37.92 1.90
1093 4012 7.117523 GCTTTGGCAATGTGTATTTGACAATAA 59.882 33.333 13.79 0.00 37.92 1.40
1094 4013 8.531622 TTTGGCAATGTGTATTTGACAATAAG 57.468 30.769 0.00 0.00 40.66 1.73
1095 4014 7.225784 TGGCAATGTGTATTTGACAATAAGT 57.774 32.000 0.00 0.00 40.66 2.24
1096 4015 7.665690 TGGCAATGTGTATTTGACAATAAGTT 58.334 30.769 0.00 0.00 40.66 2.66
1097 4016 7.812191 TGGCAATGTGTATTTGACAATAAGTTC 59.188 33.333 0.00 0.00 40.66 3.01
1098 4017 7.812191 GGCAATGTGTATTTGACAATAAGTTCA 59.188 33.333 0.00 0.00 40.66 3.18
1099 4018 9.190858 GCAATGTGTATTTGACAATAAGTTCAA 57.809 29.630 0.00 0.00 40.66 2.69
1101 4020 8.948853 ATGTGTATTTGACAATAAGTTCAACG 57.051 30.769 0.00 0.00 40.66 4.10
1102 4021 7.921787 TGTGTATTTGACAATAAGTTCAACGT 58.078 30.769 0.00 0.00 40.66 3.99
1103 4022 7.853437 TGTGTATTTGACAATAAGTTCAACGTG 59.147 33.333 0.00 0.00 40.66 4.49
1104 4023 7.853929 GTGTATTTGACAATAAGTTCAACGTGT 59.146 33.333 0.00 0.00 40.66 4.49
1105 4024 9.043079 TGTATTTGACAATAAGTTCAACGTGTA 57.957 29.630 0.00 0.00 34.15 2.90
1163 4082 9.535878 TTGAATTAAAATGTTTAACGCTTTCCT 57.464 25.926 0.00 0.00 0.00 3.36
1164 4083 8.973378 TGAATTAAAATGTTTAACGCTTTCCTG 58.027 29.630 0.00 0.00 0.00 3.86
1165 4084 8.880878 AATTAAAATGTTTAACGCTTTCCTGT 57.119 26.923 0.00 0.00 0.00 4.00
1166 4085 9.968870 AATTAAAATGTTTAACGCTTTCCTGTA 57.031 25.926 0.00 0.00 0.00 2.74
1167 4086 8.785468 TTAAAATGTTTAACGCTTTCCTGTAC 57.215 30.769 0.00 0.00 0.00 2.90
1168 4087 6.380095 AAATGTTTAACGCTTTCCTGTACA 57.620 33.333 0.00 0.00 0.00 2.90
1169 4088 6.569179 AATGTTTAACGCTTTCCTGTACAT 57.431 33.333 0.00 0.00 0.00 2.29
1170 4089 5.351233 TGTTTAACGCTTTCCTGTACATG 57.649 39.130 0.00 0.00 0.00 3.21
1171 4090 4.817464 TGTTTAACGCTTTCCTGTACATGT 59.183 37.500 2.69 2.69 0.00 3.21
1172 4091 5.144359 GTTTAACGCTTTCCTGTACATGTG 58.856 41.667 9.11 0.00 0.00 3.21
1173 4092 2.831685 ACGCTTTCCTGTACATGTGA 57.168 45.000 9.11 0.00 0.00 3.58
1174 4093 3.334583 ACGCTTTCCTGTACATGTGAT 57.665 42.857 9.11 0.00 0.00 3.06
1175 4094 3.674997 ACGCTTTCCTGTACATGTGATT 58.325 40.909 9.11 0.00 0.00 2.57
1176 4095 4.827692 ACGCTTTCCTGTACATGTGATTA 58.172 39.130 9.11 0.00 0.00 1.75
1177 4096 5.242434 ACGCTTTCCTGTACATGTGATTAA 58.758 37.500 9.11 0.00 0.00 1.40
1178 4097 5.703592 ACGCTTTCCTGTACATGTGATTAAA 59.296 36.000 9.11 2.24 0.00 1.52
1179 4098 6.374333 ACGCTTTCCTGTACATGTGATTAAAT 59.626 34.615 9.11 0.00 0.00 1.40
1180 4099 7.551262 ACGCTTTCCTGTACATGTGATTAAATA 59.449 33.333 9.11 0.00 0.00 1.40
1181 4100 8.394877 CGCTTTCCTGTACATGTGATTAAATAA 58.605 33.333 9.11 0.00 0.00 1.40
1224 4143 4.838959 AAAAATTCTCACGCGCGG 57.161 50.000 35.22 22.52 0.00 6.46
1225 4144 2.240230 AAAAATTCTCACGCGCGGA 58.760 47.368 35.22 25.37 0.00 5.54
1226 4145 0.802494 AAAAATTCTCACGCGCGGAT 59.198 45.000 35.22 11.70 0.00 4.18
1227 4146 0.373716 AAAATTCTCACGCGCGGATC 59.626 50.000 35.22 0.00 0.00 3.36
1228 4147 1.752501 AAATTCTCACGCGCGGATCG 61.753 55.000 35.22 18.95 42.12 3.69
1229 4148 2.884087 AATTCTCACGCGCGGATCGT 62.884 55.000 35.22 9.87 41.28 3.73
1230 4149 4.531912 TCTCACGCGCGGATCGTC 62.532 66.667 35.22 0.00 38.19 4.20
1237 4156 4.498520 CGCGGATCGTCCTGCACT 62.499 66.667 0.00 0.00 36.39 4.40
1238 4157 2.125512 GCGGATCGTCCTGCACTT 60.126 61.111 12.24 0.00 36.53 3.16
1239 4158 2.456119 GCGGATCGTCCTGCACTTG 61.456 63.158 12.24 0.00 36.53 3.16
1240 4159 2.456119 CGGATCGTCCTGCACTTGC 61.456 63.158 0.00 0.00 42.50 4.01
1241 4160 2.109126 GGATCGTCCTGCACTTGCC 61.109 63.158 0.00 0.00 41.18 4.52
1242 4161 2.045926 ATCGTCCTGCACTTGCCC 60.046 61.111 0.00 0.00 41.18 5.36
1243 4162 3.958147 ATCGTCCTGCACTTGCCCG 62.958 63.158 0.00 0.00 41.18 6.13
1246 4165 4.704833 TCCTGCACTTGCCCGCTC 62.705 66.667 0.00 0.00 41.18 5.03
1248 4167 2.749044 CTGCACTTGCCCGCTCAT 60.749 61.111 0.00 0.00 41.18 2.90
1249 4168 1.450134 CTGCACTTGCCCGCTCATA 60.450 57.895 0.00 0.00 41.18 2.15
1250 4169 1.434622 CTGCACTTGCCCGCTCATAG 61.435 60.000 0.00 0.00 41.18 2.23
1251 4170 2.828128 GCACTTGCCCGCTCATAGC 61.828 63.158 0.00 0.00 34.52 2.97
1252 4171 2.182842 CACTTGCCCGCTCATAGCC 61.183 63.158 0.00 0.00 38.18 3.93
1253 4172 2.969238 CTTGCCCGCTCATAGCCG 60.969 66.667 0.00 0.00 38.18 5.52
1257 4176 3.916544 CCCGCTCATAGCCGCTGA 61.917 66.667 2.16 0.00 38.18 4.26
1258 4177 2.659897 CCGCTCATAGCCGCTGAC 60.660 66.667 2.16 0.00 38.18 3.51
1259 4178 2.104928 CGCTCATAGCCGCTGACA 59.895 61.111 2.16 0.00 38.18 3.58
1260 4179 1.948138 CGCTCATAGCCGCTGACAG 60.948 63.158 2.16 0.00 38.18 3.51
1261 4180 1.593750 GCTCATAGCCGCTGACAGG 60.594 63.158 2.16 0.00 34.48 4.00
1262 4181 1.819229 CTCATAGCCGCTGACAGGT 59.181 57.895 2.16 0.00 0.00 4.00
1263 4182 0.529337 CTCATAGCCGCTGACAGGTG 60.529 60.000 2.16 0.00 0.00 4.00
1264 4183 1.522355 CATAGCCGCTGACAGGTGG 60.522 63.158 2.16 2.59 39.64 4.61
1265 4184 2.735772 ATAGCCGCTGACAGGTGGG 61.736 63.158 2.16 0.00 37.35 4.61
1268 4187 3.625897 CCGCTGACAGGTGGGTCA 61.626 66.667 4.26 0.00 45.06 4.02
1269 4188 2.357517 CGCTGACAGGTGGGTCAC 60.358 66.667 4.26 0.00 42.56 3.67
1289 4208 2.986290 CCACGTGGGCTGGACATA 59.014 61.111 27.57 0.00 0.00 2.29
1290 4209 1.298340 CCACGTGGGCTGGACATAA 59.702 57.895 27.57 0.00 0.00 1.90
1291 4210 0.107214 CCACGTGGGCTGGACATAAT 60.107 55.000 27.57 0.00 0.00 1.28
1292 4211 1.016627 CACGTGGGCTGGACATAATG 58.983 55.000 7.95 0.00 0.00 1.90
1293 4212 0.618458 ACGTGGGCTGGACATAATGT 59.382 50.000 0.00 0.00 0.00 2.71
1294 4213 1.004277 ACGTGGGCTGGACATAATGTT 59.996 47.619 0.00 0.00 0.00 2.71
1295 4214 1.670811 CGTGGGCTGGACATAATGTTC 59.329 52.381 0.00 0.00 0.00 3.18
1296 4215 1.670811 GTGGGCTGGACATAATGTTCG 59.329 52.381 0.00 0.00 0.00 3.95
1297 4216 1.557371 TGGGCTGGACATAATGTTCGA 59.443 47.619 0.00 0.00 0.00 3.71
1298 4217 2.026729 TGGGCTGGACATAATGTTCGAA 60.027 45.455 0.00 0.00 0.00 3.71
1299 4218 3.214328 GGGCTGGACATAATGTTCGAAT 58.786 45.455 0.00 0.00 0.00 3.34
1300 4219 4.141597 TGGGCTGGACATAATGTTCGAATA 60.142 41.667 0.00 0.00 0.00 1.75
1301 4220 5.003804 GGGCTGGACATAATGTTCGAATAT 58.996 41.667 0.00 0.03 0.00 1.28
1302 4221 5.106555 GGGCTGGACATAATGTTCGAATATG 60.107 44.000 8.26 11.23 34.08 1.78
1303 4222 5.106555 GGCTGGACATAATGTTCGAATATGG 60.107 44.000 17.30 9.78 32.55 2.74
1304 4223 5.700832 GCTGGACATAATGTTCGAATATGGA 59.299 40.000 17.30 7.07 32.55 3.41
1305 4224 6.204688 GCTGGACATAATGTTCGAATATGGAA 59.795 38.462 17.30 5.20 32.55 3.53
1306 4225 7.571983 GCTGGACATAATGTTCGAATATGGAAG 60.572 40.741 17.30 12.99 32.55 3.46
1307 4226 6.710295 TGGACATAATGTTCGAATATGGAAGG 59.290 38.462 17.30 8.11 32.55 3.46
1308 4227 6.934645 GGACATAATGTTCGAATATGGAAGGA 59.065 38.462 17.30 0.00 32.55 3.36
1309 4228 7.118390 GGACATAATGTTCGAATATGGAAGGAG 59.882 40.741 17.30 4.92 32.55 3.69
1310 4229 6.936900 ACATAATGTTCGAATATGGAAGGAGG 59.063 38.462 17.30 2.86 32.55 4.30
1311 4230 3.194005 TGTTCGAATATGGAAGGAGGC 57.806 47.619 0.00 0.00 0.00 4.70
1312 4231 2.503765 TGTTCGAATATGGAAGGAGGCA 59.496 45.455 0.00 0.00 0.00 4.75
1313 4232 2.872858 GTTCGAATATGGAAGGAGGCAC 59.127 50.000 0.00 0.00 0.00 5.01
1314 4233 1.416401 TCGAATATGGAAGGAGGCACC 59.584 52.381 0.00 0.00 39.35 5.01
1315 4234 1.873903 CGAATATGGAAGGAGGCACCG 60.874 57.143 0.00 0.00 44.74 4.94
1316 4235 1.141053 GAATATGGAAGGAGGCACCGT 59.859 52.381 0.00 0.00 44.74 4.83
1317 4236 2.097110 ATATGGAAGGAGGCACCGTA 57.903 50.000 0.00 0.00 44.74 4.02
1318 4237 2.097110 TATGGAAGGAGGCACCGTAT 57.903 50.000 0.00 0.00 44.74 3.06
1319 4238 1.213296 ATGGAAGGAGGCACCGTATT 58.787 50.000 0.00 0.00 44.74 1.89
1320 4239 0.988832 TGGAAGGAGGCACCGTATTT 59.011 50.000 0.00 0.00 44.74 1.40
1321 4240 1.339631 TGGAAGGAGGCACCGTATTTG 60.340 52.381 0.00 0.00 44.74 2.32
1322 4241 0.733150 GAAGGAGGCACCGTATTTGC 59.267 55.000 0.00 0.00 44.74 3.68
1323 4242 0.037590 AAGGAGGCACCGTATTTGCA 59.962 50.000 0.00 0.00 42.12 4.08
1324 4243 0.255890 AGGAGGCACCGTATTTGCAT 59.744 50.000 0.00 0.00 42.12 3.96
1325 4244 0.381801 GGAGGCACCGTATTTGCATG 59.618 55.000 0.00 0.00 42.12 4.06
1326 4245 0.381801 GAGGCACCGTATTTGCATGG 59.618 55.000 0.00 0.00 42.12 3.66
1327 4246 1.226945 GGCACCGTATTTGCATGGC 60.227 57.895 0.00 0.00 42.12 4.40
1328 4247 1.226945 GCACCGTATTTGCATGGCC 60.227 57.895 0.00 0.00 39.93 5.36
1329 4248 1.063972 CACCGTATTTGCATGGCCG 59.936 57.895 0.00 0.00 0.00 6.13
1330 4249 2.118404 ACCGTATTTGCATGGCCGG 61.118 57.895 12.20 12.20 41.09 6.13
1331 4250 1.821759 CCGTATTTGCATGGCCGGA 60.822 57.895 5.05 0.00 37.66 5.14
1332 4251 1.355210 CGTATTTGCATGGCCGGAC 59.645 57.895 5.05 0.56 0.00 4.79
1333 4252 1.372838 CGTATTTGCATGGCCGGACA 61.373 55.000 15.46 15.46 0.00 4.02
1334 4253 0.814457 GTATTTGCATGGCCGGACAA 59.186 50.000 17.77 0.00 0.00 3.18
1335 4254 1.102154 TATTTGCATGGCCGGACAAG 58.898 50.000 17.77 12.75 0.00 3.16
1336 4255 0.899717 ATTTGCATGGCCGGACAAGT 60.900 50.000 17.77 0.00 0.00 3.16
1337 4256 1.112315 TTTGCATGGCCGGACAAGTT 61.112 50.000 17.77 0.00 0.00 2.66
1338 4257 1.523154 TTGCATGGCCGGACAAGTTC 61.523 55.000 17.77 3.98 0.00 3.01
1339 4258 3.039202 GCATGGCCGGACAAGTTCG 62.039 63.158 17.77 1.10 0.00 3.95
1340 4259 1.375396 CATGGCCGGACAAGTTCGA 60.375 57.895 17.77 0.00 0.00 3.71
1341 4260 1.079127 ATGGCCGGACAAGTTCGAG 60.079 57.895 17.77 0.00 0.00 4.04
1342 4261 3.119096 GGCCGGACAAGTTCGAGC 61.119 66.667 5.05 4.32 0.00 5.03
1343 4262 3.479269 GCCGGACAAGTTCGAGCG 61.479 66.667 5.05 0.00 0.00 5.03
1344 4263 2.049433 CCGGACAAGTTCGAGCGT 60.049 61.111 0.00 0.00 0.00 5.07
1345 4264 2.087009 CCGGACAAGTTCGAGCGTC 61.087 63.158 0.00 0.00 0.00 5.19
1346 4265 1.371267 CGGACAAGTTCGAGCGTCA 60.371 57.895 8.94 0.00 0.00 4.35
1347 4266 1.337817 CGGACAAGTTCGAGCGTCAG 61.338 60.000 8.94 2.40 0.00 3.51
1348 4267 0.318784 GGACAAGTTCGAGCGTCAGT 60.319 55.000 8.94 0.39 0.00 3.41
1349 4268 1.488527 GACAAGTTCGAGCGTCAGTT 58.511 50.000 3.14 0.00 0.00 3.16
1350 4269 1.859080 GACAAGTTCGAGCGTCAGTTT 59.141 47.619 3.14 0.00 0.00 2.66
1351 4270 2.277084 ACAAGTTCGAGCGTCAGTTTT 58.723 42.857 0.00 0.00 0.00 2.43
1352 4271 2.030457 ACAAGTTCGAGCGTCAGTTTTG 59.970 45.455 0.00 0.00 0.00 2.44
1353 4272 1.935933 AGTTCGAGCGTCAGTTTTGT 58.064 45.000 0.00 0.00 0.00 2.83
1354 4273 1.593006 AGTTCGAGCGTCAGTTTTGTG 59.407 47.619 0.00 0.00 0.00 3.33
1355 4274 1.326548 GTTCGAGCGTCAGTTTTGTGT 59.673 47.619 0.00 0.00 0.00 3.72
1356 4275 2.495409 TCGAGCGTCAGTTTTGTGTA 57.505 45.000 0.00 0.00 0.00 2.90
1357 4276 3.021269 TCGAGCGTCAGTTTTGTGTAT 57.979 42.857 0.00 0.00 0.00 2.29
1358 4277 3.386486 TCGAGCGTCAGTTTTGTGTATT 58.614 40.909 0.00 0.00 0.00 1.89
1359 4278 3.805422 TCGAGCGTCAGTTTTGTGTATTT 59.195 39.130 0.00 0.00 0.00 1.40
1360 4279 4.271533 TCGAGCGTCAGTTTTGTGTATTTT 59.728 37.500 0.00 0.00 0.00 1.82
1361 4280 4.375698 CGAGCGTCAGTTTTGTGTATTTTG 59.624 41.667 0.00 0.00 0.00 2.44
1362 4281 4.041723 AGCGTCAGTTTTGTGTATTTTGC 58.958 39.130 0.00 0.00 0.00 3.68
1363 4282 3.794028 GCGTCAGTTTTGTGTATTTTGCA 59.206 39.130 0.00 0.00 0.00 4.08
1364 4283 4.266502 GCGTCAGTTTTGTGTATTTTGCAA 59.733 37.500 0.00 0.00 0.00 4.08
1365 4284 5.713281 CGTCAGTTTTGTGTATTTTGCAAC 58.287 37.500 0.00 0.00 0.00 4.17
1366 4285 5.514914 CGTCAGTTTTGTGTATTTTGCAACT 59.485 36.000 0.00 0.00 0.00 3.16
1367 4286 6.034470 CGTCAGTTTTGTGTATTTTGCAACTT 59.966 34.615 0.00 0.00 0.00 2.66
1368 4287 7.411372 CGTCAGTTTTGTGTATTTTGCAACTTT 60.411 33.333 0.00 0.00 0.00 2.66
1369 4288 8.865001 GTCAGTTTTGTGTATTTTGCAACTTTA 58.135 29.630 0.00 0.00 0.00 1.85
1370 4289 9.081997 TCAGTTTTGTGTATTTTGCAACTTTAG 57.918 29.630 0.00 0.00 0.00 1.85
1371 4290 9.081997 CAGTTTTGTGTATTTTGCAACTTTAGA 57.918 29.630 0.00 0.00 0.00 2.10
1372 4291 9.083080 AGTTTTGTGTATTTTGCAACTTTAGAC 57.917 29.630 0.00 0.88 0.00 2.59
1373 4292 8.865001 GTTTTGTGTATTTTGCAACTTTAGACA 58.135 29.630 0.00 3.61 0.00 3.41
1374 4293 7.979115 TTGTGTATTTTGCAACTTTAGACAC 57.021 32.000 15.44 15.44 36.16 3.67
1375 4294 6.500041 TGTGTATTTTGCAACTTTAGACACC 58.500 36.000 17.76 7.40 35.03 4.16
1376 4295 6.095580 TGTGTATTTTGCAACTTTAGACACCA 59.904 34.615 17.76 9.00 35.03 4.17
1377 4296 6.975772 GTGTATTTTGCAACTTTAGACACCAA 59.024 34.615 0.00 0.00 30.81 3.67
1378 4297 7.489757 GTGTATTTTGCAACTTTAGACACCAAA 59.510 33.333 0.00 0.00 30.81 3.28
1379 4298 6.902224 ATTTTGCAACTTTAGACACCAAAC 57.098 33.333 0.00 0.00 0.00 2.93
1380 4299 5.652994 TTTGCAACTTTAGACACCAAACT 57.347 34.783 0.00 0.00 0.00 2.66
1381 4300 4.630894 TGCAACTTTAGACACCAAACTG 57.369 40.909 0.00 0.00 0.00 3.16
1382 4301 4.265893 TGCAACTTTAGACACCAAACTGA 58.734 39.130 0.00 0.00 0.00 3.41
1383 4302 4.095782 TGCAACTTTAGACACCAAACTGAC 59.904 41.667 0.00 0.00 0.00 3.51
1384 4303 4.497507 GCAACTTTAGACACCAAACTGACC 60.498 45.833 0.00 0.00 0.00 4.02
1385 4304 3.463944 ACTTTAGACACCAAACTGACCG 58.536 45.455 0.00 0.00 0.00 4.79
1386 4305 3.118519 ACTTTAGACACCAAACTGACCGT 60.119 43.478 0.00 0.00 0.00 4.83
1387 4306 2.519377 TAGACACCAAACTGACCGTG 57.481 50.000 0.00 0.00 0.00 4.94
1388 4307 0.814010 AGACACCAAACTGACCGTGC 60.814 55.000 0.00 0.00 0.00 5.34
1389 4308 1.078072 ACACCAAACTGACCGTGCA 60.078 52.632 0.00 0.00 0.00 4.57
1390 4309 0.678366 ACACCAAACTGACCGTGCAA 60.678 50.000 0.00 0.00 0.00 4.08
1391 4310 0.029300 CACCAAACTGACCGTGCAAG 59.971 55.000 0.00 0.00 0.00 4.01
1392 4311 0.107410 ACCAAACTGACCGTGCAAGA 60.107 50.000 0.00 0.00 0.00 3.02
1393 4312 0.307760 CCAAACTGACCGTGCAAGAC 59.692 55.000 0.00 0.00 0.00 3.01
1394 4313 1.013596 CAAACTGACCGTGCAAGACA 58.986 50.000 0.00 0.37 0.00 3.41
1395 4314 1.400142 CAAACTGACCGTGCAAGACAA 59.600 47.619 0.00 0.00 0.00 3.18
1396 4315 1.745232 AACTGACCGTGCAAGACAAA 58.255 45.000 0.00 0.00 0.00 2.83
1397 4316 1.967319 ACTGACCGTGCAAGACAAAT 58.033 45.000 0.00 0.00 0.00 2.32
1398 4317 2.297701 ACTGACCGTGCAAGACAAATT 58.702 42.857 0.00 0.00 0.00 1.82
1399 4318 2.033299 ACTGACCGTGCAAGACAAATTG 59.967 45.455 0.00 0.00 0.00 2.32
1400 4319 2.290367 CTGACCGTGCAAGACAAATTGA 59.710 45.455 0.00 0.00 31.55 2.57
1401 4320 2.685388 TGACCGTGCAAGACAAATTGAA 59.315 40.909 0.00 0.00 31.55 2.69
1402 4321 3.243035 TGACCGTGCAAGACAAATTGAAG 60.243 43.478 0.00 0.00 31.55 3.02
1403 4322 2.053627 CCGTGCAAGACAAATTGAAGC 58.946 47.619 0.00 0.00 31.55 3.86
1404 4323 2.543445 CCGTGCAAGACAAATTGAAGCA 60.543 45.455 0.00 1.33 31.55 3.91
1405 4324 2.468777 CGTGCAAGACAAATTGAAGCAC 59.531 45.455 18.56 18.56 45.23 4.40
1406 4325 3.709987 GTGCAAGACAAATTGAAGCACT 58.290 40.909 20.02 3.87 45.24 4.40
1407 4326 4.114794 GTGCAAGACAAATTGAAGCACTT 58.885 39.130 20.02 8.11 45.24 3.16
1408 4327 4.207841 GTGCAAGACAAATTGAAGCACTTC 59.792 41.667 20.02 3.37 45.24 3.01
1409 4328 3.737774 GCAAGACAAATTGAAGCACTTCC 59.262 43.478 7.88 0.00 38.77 3.46
1410 4329 4.737352 GCAAGACAAATTGAAGCACTTCCA 60.737 41.667 7.88 0.00 38.77 3.53
1411 4330 4.843220 AGACAAATTGAAGCACTTCCAG 57.157 40.909 7.88 0.00 38.77 3.86
1412 4331 4.210331 AGACAAATTGAAGCACTTCCAGT 58.790 39.130 7.88 0.00 38.77 4.00
1413 4332 7.439573 CAAGACAAATTGAAGCACTTCCAGTG 61.440 42.308 7.88 0.00 39.59 3.66
1414 4333 9.702434 CAAGACAAATTGAAGCACTTCCAGTGT 62.702 40.741 7.88 6.82 39.18 3.55
1492 4414 4.665833 ATCTGGATGTGCATTTTCATGG 57.334 40.909 0.00 0.00 0.00 3.66
1496 4418 2.869801 GGATGTGCATTTTCATGGCATG 59.130 45.455 21.42 21.42 40.05 4.06
1500 4422 4.939271 TGTGCATTTTCATGGCATGATAG 58.061 39.130 29.22 19.23 40.05 2.08
1510 4432 4.692155 TCATGGCATGATAGCTAACAATCG 59.308 41.667 25.63 1.50 33.59 3.34
1511 4433 3.402110 TGGCATGATAGCTAACAATCGG 58.598 45.455 7.86 0.24 34.17 4.18
1514 4436 3.668447 CATGATAGCTAACAATCGGGCT 58.332 45.455 7.86 0.00 38.62 5.19
1595 4517 7.226720 CGTATCACTCAAGCCTTGGTAAAATAT 59.773 37.037 4.30 0.00 0.00 1.28
5915 15271 1.834263 GCCCACATCCTCACTACTCTT 59.166 52.381 0.00 0.00 0.00 2.85
5916 15272 2.159028 GCCCACATCCTCACTACTCTTC 60.159 54.545 0.00 0.00 0.00 2.87
6174 15586 7.490402 CCAAAAACAATCATAAGCTGAATCTCC 59.510 37.037 0.00 0.00 37.44 3.71
6180 15592 9.584008 ACAATCATAAGCTGAATCTCCAATAAT 57.416 29.630 0.00 0.00 37.44 1.28
6213 15625 4.074970 GCAGAAGGTGAAGGAAATGAAGA 58.925 43.478 0.00 0.00 0.00 2.87
6214 15626 4.520492 GCAGAAGGTGAAGGAAATGAAGAA 59.480 41.667 0.00 0.00 0.00 2.52
6215 15627 5.010012 GCAGAAGGTGAAGGAAATGAAGAAA 59.990 40.000 0.00 0.00 0.00 2.52
6251 15663 6.293845 GCTCGCTGATCAGAATTCCATTTAAT 60.294 38.462 27.04 0.00 0.00 1.40
6352 15788 8.239259 AAGCTAATTCATTTGCTGTGGGACAG 62.239 42.308 8.90 0.00 45.52 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 9.281371 CTTTGAGATTGGTCATGTATATGTGAT 57.719 33.333 0.00 0.00 35.73 3.06
16 17 5.702670 CGGCTTTGAGATTGGTCATGTATAT 59.297 40.000 0.00 0.00 0.00 0.86
19 20 3.270027 CGGCTTTGAGATTGGTCATGTA 58.730 45.455 0.00 0.00 0.00 2.29
21 22 2.086869 ACGGCTTTGAGATTGGTCATG 58.913 47.619 0.00 0.00 0.00 3.07
33 34 4.365723 AGTGGTATCGTATAACGGCTTTG 58.634 43.478 0.00 0.00 42.81 2.77
34 35 4.660789 AGTGGTATCGTATAACGGCTTT 57.339 40.909 0.00 0.00 42.81 3.51
35 36 5.474532 TGATAGTGGTATCGTATAACGGCTT 59.525 40.000 0.00 0.00 42.81 4.35
36 37 5.005740 TGATAGTGGTATCGTATAACGGCT 58.994 41.667 0.00 0.00 42.81 5.52
38 39 5.319139 CGTGATAGTGGTATCGTATAACGG 58.681 45.833 0.00 0.00 42.81 4.44
41 42 5.997129 TCACCGTGATAGTGGTATCGTATAA 59.003 40.000 0.00 0.00 38.37 0.98
43 44 4.392047 TCACCGTGATAGTGGTATCGTAT 58.608 43.478 0.00 0.00 38.37 3.06
46 47 3.703286 TTCACCGTGATAGTGGTATCG 57.297 47.619 1.09 0.00 38.37 2.92
47 48 5.007385 ACTTTCACCGTGATAGTGGTATC 57.993 43.478 19.97 0.00 37.30 2.24
49 50 5.981088 TTACTTTCACCGTGATAGTGGTA 57.019 39.130 25.99 13.60 38.71 3.25
54 55 7.745022 TTCGTAATTACTTTCACCGTGATAG 57.255 36.000 15.16 15.16 32.72 2.08
56 57 7.424227 TTTTCGTAATTACTTTCACCGTGAT 57.576 32.000 13.56 0.00 0.00 3.06
61 62 9.673454 ATCAAGTTTTTCGTAATTACTTTCACC 57.327 29.630 13.56 0.00 0.00 4.02
98 100 9.472361 GAGTGTAGTTTGTTGTACTTTATCTCA 57.528 33.333 0.00 0.00 0.00 3.27
170 172 6.041979 AGGAGGCACAATTCAAAAACTTGTAT 59.958 34.615 0.00 0.00 32.14 2.29
173 175 4.696455 AGGAGGCACAATTCAAAAACTTG 58.304 39.130 0.00 0.00 0.00 3.16
176 178 6.435430 AAAAAGGAGGCACAATTCAAAAAC 57.565 33.333 0.00 0.00 0.00 2.43
243 246 7.760340 CCTCCGGTATAATTAACTCATAGAAGC 59.240 40.741 0.00 0.00 0.00 3.86
248 251 6.495872 AGCACCTCCGGTATAATTAACTCATA 59.504 38.462 0.00 0.00 32.11 2.15
250 253 4.652421 AGCACCTCCGGTATAATTAACTCA 59.348 41.667 0.00 0.00 32.11 3.41
255 258 5.129815 AGTTGAAGCACCTCCGGTATAATTA 59.870 40.000 0.00 0.00 32.11 1.40
264 267 0.035458 AGGAAGTTGAAGCACCTCCG 59.965 55.000 0.00 0.00 0.00 4.63
268 271 0.877743 GCAGAGGAAGTTGAAGCACC 59.122 55.000 0.00 0.00 0.00 5.01
269 272 1.265365 GTGCAGAGGAAGTTGAAGCAC 59.735 52.381 0.00 0.00 43.08 4.40
276 279 1.765314 ACTGACTGTGCAGAGGAAGTT 59.235 47.619 16.19 0.00 39.20 2.66
281 284 3.062763 CACTAAACTGACTGTGCAGAGG 58.937 50.000 16.19 0.00 39.20 3.69
287 290 6.604735 ACTTTAAGCACTAAACTGACTGTG 57.395 37.500 0.00 0.00 0.00 3.66
288 291 6.598064 ACAACTTTAAGCACTAAACTGACTGT 59.402 34.615 0.00 0.00 0.00 3.55
300 303 9.724839 TTTCATGTACTTTACAACTTTAAGCAC 57.275 29.630 0.00 0.00 42.76 4.40
301 304 9.724839 GTTTCATGTACTTTACAACTTTAAGCA 57.275 29.630 0.00 0.00 42.76 3.91
311 314 5.373222 AGCACTGGTTTCATGTACTTTACA 58.627 37.500 0.00 0.00 43.80 2.41
312 315 5.389516 CGAGCACTGGTTTCATGTACTTTAC 60.390 44.000 0.00 0.00 0.00 2.01
316 319 2.299013 TCGAGCACTGGTTTCATGTACT 59.701 45.455 0.00 0.00 0.00 2.73
317 320 2.683968 TCGAGCACTGGTTTCATGTAC 58.316 47.619 0.00 0.00 0.00 2.90
324 327 1.940613 GACAAGTTCGAGCACTGGTTT 59.059 47.619 1.01 0.00 30.37 3.27
325 328 1.583054 GACAAGTTCGAGCACTGGTT 58.417 50.000 1.01 0.00 30.37 3.67
327 330 1.284982 CGGACAAGTTCGAGCACTGG 61.285 60.000 1.01 0.00 0.00 4.00
328 331 0.318699 TCGGACAAGTTCGAGCACTG 60.319 55.000 1.01 0.86 0.00 3.66
330 333 1.126846 CATTCGGACAAGTTCGAGCAC 59.873 52.381 3.59 0.00 36.72 4.40
331 334 1.270094 ACATTCGGACAAGTTCGAGCA 60.270 47.619 3.59 0.00 36.72 4.26
332 335 1.126846 CACATTCGGACAAGTTCGAGC 59.873 52.381 3.59 0.00 36.72 5.03
340 343 3.067833 TCGTATTTGCACATTCGGACAA 58.932 40.909 11.24 0.00 0.00 3.18
342 345 3.607439 CATCGTATTTGCACATTCGGAC 58.393 45.455 11.24 0.00 0.00 4.79
344 347 2.375110 GCATCGTATTTGCACATTCGG 58.625 47.619 11.24 0.00 39.90 4.30
346 349 3.548818 GGAGGCATCGTATTTGCACATTC 60.549 47.826 0.00 0.00 41.95 2.67
348 351 1.949525 GGAGGCATCGTATTTGCACAT 59.050 47.619 0.00 0.00 41.95 3.21
351 354 2.346766 ATGGAGGCATCGTATTTGCA 57.653 45.000 0.00 0.00 41.95 4.08
352 355 3.181487 ACAAATGGAGGCATCGTATTTGC 60.181 43.478 26.00 1.70 40.58 3.68
353 356 4.637483 ACAAATGGAGGCATCGTATTTG 57.363 40.909 25.16 25.16 41.55 2.32
355 358 5.702670 CAGATACAAATGGAGGCATCGTATT 59.297 40.000 0.00 0.00 0.00 1.89
359 362 2.810274 CCAGATACAAATGGAGGCATCG 59.190 50.000 0.00 0.00 39.02 3.84
360 363 4.090761 TCCAGATACAAATGGAGGCATC 57.909 45.455 0.00 0.00 40.70 3.91
364 367 5.688807 AGACATTCCAGATACAAATGGAGG 58.311 41.667 0.00 0.00 46.01 4.30
367 370 5.471456 GGCTAGACATTCCAGATACAAATGG 59.529 44.000 0.00 0.00 35.24 3.16
369 372 6.294473 CAGGCTAGACATTCCAGATACAAAT 58.706 40.000 0.00 0.00 0.00 2.32
370 373 5.674525 CAGGCTAGACATTCCAGATACAAA 58.325 41.667 0.00 0.00 0.00 2.83
372 375 3.070159 GCAGGCTAGACATTCCAGATACA 59.930 47.826 0.00 0.00 0.00 2.29
373 376 3.070159 TGCAGGCTAGACATTCCAGATAC 59.930 47.826 0.00 0.00 0.00 2.24
374 377 3.308401 TGCAGGCTAGACATTCCAGATA 58.692 45.455 0.00 0.00 0.00 1.98
377 380 2.219458 CATGCAGGCTAGACATTCCAG 58.781 52.381 0.00 0.00 0.00 3.86
379 382 1.133976 ACCATGCAGGCTAGACATTCC 60.134 52.381 0.00 0.00 43.14 3.01
380 383 1.945394 CACCATGCAGGCTAGACATTC 59.055 52.381 0.00 0.00 43.14 2.67
382 385 0.914644 ACACCATGCAGGCTAGACAT 59.085 50.000 0.00 0.00 43.14 3.06
384 387 2.772739 CACACCATGCAGGCTAGAC 58.227 57.895 0.00 0.00 43.14 2.59
403 406 1.683025 TGGGTCAATGCCATGCTGG 60.683 57.895 0.00 0.00 41.55 4.85
404 407 1.514087 GTGGGTCAATGCCATGCTG 59.486 57.895 0.00 0.00 0.00 4.41
405 408 1.683365 GGTGGGTCAATGCCATGCT 60.683 57.895 0.00 0.00 0.00 3.79
408 411 0.323725 GACAGGTGGGTCAATGCCAT 60.324 55.000 0.00 0.00 37.73 4.40
410 413 0.962356 CTGACAGGTGGGTCAATGCC 60.962 60.000 0.00 0.00 46.36 4.40
412 415 1.527034 CACTGACAGGTGGGTCAATG 58.473 55.000 7.51 0.00 46.36 2.82
420 423 2.047844 CTCCGCCACTGACAGGTG 60.048 66.667 7.51 2.99 37.00 4.00
423 426 0.389166 GAACTCTCCGCCACTGACAG 60.389 60.000 0.00 0.00 0.00 3.51
424 427 1.112916 TGAACTCTCCGCCACTGACA 61.113 55.000 0.00 0.00 0.00 3.58
425 428 0.389166 CTGAACTCTCCGCCACTGAC 60.389 60.000 0.00 0.00 0.00 3.51
426 429 1.536073 CCTGAACTCTCCGCCACTGA 61.536 60.000 0.00 0.00 0.00 3.41
429 432 1.216710 CTCCTGAACTCTCCGCCAC 59.783 63.158 0.00 0.00 0.00 5.01
431 434 2.185608 GCTCCTGAACTCTCCGCC 59.814 66.667 0.00 0.00 0.00 6.13
432 435 1.153667 CAGCTCCTGAACTCTCCGC 60.154 63.158 0.00 0.00 32.44 5.54
433 436 1.153667 GCAGCTCCTGAACTCTCCG 60.154 63.158 0.00 0.00 32.44 4.63
435 438 0.607620 ACAGCAGCTCCTGAACTCTC 59.392 55.000 12.78 0.00 36.67 3.20
437 440 0.319728 TCACAGCAGCTCCTGAACTC 59.680 55.000 12.78 0.00 36.67 3.01
438 441 0.034616 GTCACAGCAGCTCCTGAACT 59.965 55.000 12.78 0.00 36.67 3.01
440 443 1.123861 AGGTCACAGCAGCTCCTGAA 61.124 55.000 12.78 0.00 36.67 3.02
442 445 1.375652 CAGGTCACAGCAGCTCCTG 60.376 63.158 12.33 12.33 39.41 3.86
444 447 2.046507 CCAGGTCACAGCAGCTCC 60.047 66.667 0.00 0.00 0.00 4.70
445 448 2.046507 CCCAGGTCACAGCAGCTC 60.047 66.667 0.00 0.00 0.00 4.09
457 460 3.976701 AAATCCTCACGCGCCCAGG 62.977 63.158 5.73 9.37 0.00 4.45
458 461 1.586154 AAAAATCCTCACGCGCCCAG 61.586 55.000 5.73 0.00 0.00 4.45
544 547 2.100631 GGTTCGGTCCTGCGTCATG 61.101 63.158 0.00 0.00 0.00 3.07
546 549 4.351938 CGGTTCGGTCCTGCGTCA 62.352 66.667 0.00 0.00 0.00 4.35
547 550 4.353437 ACGGTTCGGTCCTGCGTC 62.353 66.667 0.00 0.00 0.00 5.19
551 554 2.233605 TATGGCACGGTTCGGTCCTG 62.234 60.000 0.00 0.00 0.00 3.86
552 555 1.985662 TATGGCACGGTTCGGTCCT 60.986 57.895 0.00 0.00 0.00 3.85
553 556 1.812507 GTATGGCACGGTTCGGTCC 60.813 63.158 0.00 0.00 0.00 4.46
556 559 0.806102 CAGAGTATGGCACGGTTCGG 60.806 60.000 0.00 0.00 0.00 4.30
558 561 0.391130 TGCAGAGTATGGCACGGTTC 60.391 55.000 0.00 0.00 34.58 3.62
561 564 0.659427 CAATGCAGAGTATGGCACGG 59.341 55.000 0.00 0.00 43.75 4.94
562 565 0.028505 GCAATGCAGAGTATGGCACG 59.971 55.000 0.00 0.00 43.75 5.34
563 566 1.386533 AGCAATGCAGAGTATGGCAC 58.613 50.000 8.35 0.00 43.75 5.01
571 574 7.533426 AGTTACTTTTTCATAGCAATGCAGAG 58.467 34.615 8.35 0.00 32.76 3.35
572 575 7.452880 AGTTACTTTTTCATAGCAATGCAGA 57.547 32.000 8.35 0.00 32.76 4.26
667 675 7.529158 TGTGTGCATGTACAGAATTATTTCAG 58.471 34.615 17.51 0.00 34.08 3.02
674 682 6.881065 ACTTCTATGTGTGCATGTACAGAATT 59.119 34.615 17.51 8.46 36.58 2.17
678 686 5.460571 CACTTCTATGTGTGCATGTACAG 57.539 43.478 17.51 5.74 36.58 2.74
840 1252 7.644157 GCTCTAAGTGACTTTCAAATTTCGTTT 59.356 33.333 1.97 0.00 0.00 3.60
942 3860 0.243636 GATTTTTGGAGCACGGTGGG 59.756 55.000 10.60 0.00 0.00 4.61
1000 3918 5.509840 GGGTCCATAGAAGCGCCATATATAG 60.510 48.000 2.29 0.00 0.00 1.31
1043 3961 9.366216 AGCGAAAAACTAAAGAACTTGAAAATT 57.634 25.926 0.00 0.00 0.00 1.82
1060 3979 2.607180 ACACATTGCCAAAGCGAAAAAC 59.393 40.909 0.00 0.00 44.31 2.43
1065 3984 3.254411 TCAAATACACATTGCCAAAGCGA 59.746 39.130 0.00 0.00 44.31 4.93
1066 3985 3.364621 GTCAAATACACATTGCCAAAGCG 59.635 43.478 0.00 0.00 44.31 4.68
1067 3986 4.305769 TGTCAAATACACATTGCCAAAGC 58.694 39.130 0.00 0.00 34.09 3.51
1068 3987 8.531622 TTATTGTCAAATACACATTGCCAAAG 57.468 30.769 0.00 0.00 38.00 2.77
1069 3988 8.147058 ACTTATTGTCAAATACACATTGCCAAA 58.853 29.630 0.00 0.00 38.00 3.28
1070 3989 7.665690 ACTTATTGTCAAATACACATTGCCAA 58.334 30.769 0.00 0.00 38.00 4.52
1071 3990 7.225784 ACTTATTGTCAAATACACATTGCCA 57.774 32.000 0.00 0.00 38.00 4.92
1072 3991 7.812191 TGAACTTATTGTCAAATACACATTGCC 59.188 33.333 0.00 0.00 38.00 4.52
1073 3992 8.741101 TGAACTTATTGTCAAATACACATTGC 57.259 30.769 0.00 0.00 38.00 3.56
1075 3994 9.393249 CGTTGAACTTATTGTCAAATACACATT 57.607 29.630 0.00 0.00 38.00 2.71
1076 3995 8.564574 ACGTTGAACTTATTGTCAAATACACAT 58.435 29.630 0.00 0.00 38.00 3.21
1077 3996 7.853437 CACGTTGAACTTATTGTCAAATACACA 59.147 33.333 0.00 0.00 38.00 3.72
1078 3997 7.853929 ACACGTTGAACTTATTGTCAAATACAC 59.146 33.333 0.00 0.00 38.00 2.90
1079 3998 7.921787 ACACGTTGAACTTATTGTCAAATACA 58.078 30.769 0.00 0.00 35.88 2.29
1137 4056 9.535878 AGGAAAGCGTTAAACATTTTAATTCAA 57.464 25.926 0.00 0.00 0.00 2.69
1138 4057 8.973378 CAGGAAAGCGTTAAACATTTTAATTCA 58.027 29.630 0.00 0.00 0.00 2.57
1139 4058 8.974408 ACAGGAAAGCGTTAAACATTTTAATTC 58.026 29.630 0.00 0.00 0.00 2.17
1140 4059 8.880878 ACAGGAAAGCGTTAAACATTTTAATT 57.119 26.923 0.00 0.00 0.00 1.40
1141 4060 9.401873 GTACAGGAAAGCGTTAAACATTTTAAT 57.598 29.630 0.00 0.00 0.00 1.40
1142 4061 8.404000 TGTACAGGAAAGCGTTAAACATTTTAA 58.596 29.630 0.00 0.00 0.00 1.52
1143 4062 7.928103 TGTACAGGAAAGCGTTAAACATTTTA 58.072 30.769 0.00 0.00 0.00 1.52
1144 4063 6.797454 TGTACAGGAAAGCGTTAAACATTTT 58.203 32.000 0.00 0.00 0.00 1.82
1145 4064 6.380095 TGTACAGGAAAGCGTTAAACATTT 57.620 33.333 0.00 0.00 0.00 2.32
1146 4065 6.016610 ACATGTACAGGAAAGCGTTAAACATT 60.017 34.615 15.54 0.00 0.00 2.71
1147 4066 5.472137 ACATGTACAGGAAAGCGTTAAACAT 59.528 36.000 15.54 0.00 0.00 2.71
1148 4067 4.817464 ACATGTACAGGAAAGCGTTAAACA 59.183 37.500 15.54 0.00 0.00 2.83
1149 4068 5.049954 TCACATGTACAGGAAAGCGTTAAAC 60.050 40.000 15.54 0.00 0.00 2.01
1150 4069 5.057819 TCACATGTACAGGAAAGCGTTAAA 58.942 37.500 15.54 0.00 0.00 1.52
1151 4070 4.633175 TCACATGTACAGGAAAGCGTTAA 58.367 39.130 15.54 0.00 0.00 2.01
1152 4071 4.260139 TCACATGTACAGGAAAGCGTTA 57.740 40.909 15.54 0.00 0.00 3.18
1153 4072 3.120321 TCACATGTACAGGAAAGCGTT 57.880 42.857 15.54 0.00 0.00 4.84
1154 4073 2.831685 TCACATGTACAGGAAAGCGT 57.168 45.000 15.54 0.00 0.00 5.07
1155 4074 5.794687 TTAATCACATGTACAGGAAAGCG 57.205 39.130 15.54 0.00 0.00 4.68
1207 4126 0.802494 ATCCGCGCGTGAGAATTTTT 59.198 45.000 29.95 5.81 0.00 1.94
1208 4127 0.373716 GATCCGCGCGTGAGAATTTT 59.626 50.000 29.95 9.13 0.00 1.82
1209 4128 1.752501 CGATCCGCGCGTGAGAATTT 61.753 55.000 29.95 9.86 0.00 1.82
1210 4129 2.230940 CGATCCGCGCGTGAGAATT 61.231 57.895 29.95 10.23 0.00 2.17
1211 4130 2.655364 CGATCCGCGCGTGAGAAT 60.655 61.111 29.95 13.40 0.00 2.40
1212 4131 4.111016 ACGATCCGCGCGTGAGAA 62.111 61.111 29.95 8.80 46.04 2.87
1213 4132 4.531912 GACGATCCGCGCGTGAGA 62.532 66.667 29.95 19.40 46.04 3.27
1220 4139 3.989698 AAGTGCAGGACGATCCGCG 62.990 63.158 0.00 0.00 42.75 6.46
1221 4140 2.125512 AAGTGCAGGACGATCCGC 60.126 61.111 0.00 1.94 42.75 5.54
1222 4141 2.456119 GCAAGTGCAGGACGATCCG 61.456 63.158 0.00 0.00 42.75 4.18
1223 4142 2.109126 GGCAAGTGCAGGACGATCC 61.109 63.158 5.52 0.00 44.36 3.36
1224 4143 2.109126 GGGCAAGTGCAGGACGATC 61.109 63.158 5.52 0.00 44.36 3.69
1225 4144 2.045926 GGGCAAGTGCAGGACGAT 60.046 61.111 5.52 0.00 44.36 3.73
1226 4145 4.680237 CGGGCAAGTGCAGGACGA 62.680 66.667 5.52 0.00 44.36 4.20
1229 4148 4.704833 GAGCGGGCAAGTGCAGGA 62.705 66.667 5.52 0.00 44.36 3.86
1230 4149 2.874648 TATGAGCGGGCAAGTGCAGG 62.875 60.000 5.52 0.00 44.36 4.85
1231 4150 1.434622 CTATGAGCGGGCAAGTGCAG 61.435 60.000 5.52 0.00 44.36 4.41
1232 4151 1.450134 CTATGAGCGGGCAAGTGCA 60.450 57.895 5.52 0.00 44.36 4.57
1233 4152 2.828128 GCTATGAGCGGGCAAGTGC 61.828 63.158 0.00 0.00 41.14 4.40
1234 4153 2.182842 GGCTATGAGCGGGCAAGTG 61.183 63.158 0.00 0.00 43.62 3.16
1235 4154 2.190578 GGCTATGAGCGGGCAAGT 59.809 61.111 0.00 0.00 43.62 3.16
1236 4155 2.969238 CGGCTATGAGCGGGCAAG 60.969 66.667 0.00 0.00 43.62 4.01
1240 4159 3.916544 TCAGCGGCTATGAGCGGG 61.917 66.667 0.26 0.00 43.62 6.13
1241 4160 2.659897 GTCAGCGGCTATGAGCGG 60.660 66.667 0.26 1.94 43.62 5.52
1242 4161 1.948138 CTGTCAGCGGCTATGAGCG 60.948 63.158 0.26 0.00 43.62 5.03
1243 4162 1.593750 CCTGTCAGCGGCTATGAGC 60.594 63.158 0.26 0.00 41.46 4.26
1244 4163 0.529337 CACCTGTCAGCGGCTATGAG 60.529 60.000 0.26 0.00 0.00 2.90
1245 4164 1.517361 CACCTGTCAGCGGCTATGA 59.483 57.895 0.26 0.00 0.00 2.15
1246 4165 1.522355 CCACCTGTCAGCGGCTATG 60.522 63.158 0.26 0.00 0.00 2.23
1247 4166 2.735772 CCCACCTGTCAGCGGCTAT 61.736 63.158 0.26 0.00 0.00 2.97
1248 4167 3.390521 CCCACCTGTCAGCGGCTA 61.391 66.667 0.26 0.00 0.00 3.93
1251 4170 3.625897 TGACCCACCTGTCAGCGG 61.626 66.667 0.00 0.00 40.22 5.52
1252 4171 2.357517 GTGACCCACCTGTCAGCG 60.358 66.667 0.00 0.00 45.40 5.18
1272 4191 0.107214 ATTATGTCCAGCCCACGTGG 60.107 55.000 28.26 28.26 36.28 4.94
1273 4192 1.016627 CATTATGTCCAGCCCACGTG 58.983 55.000 9.08 9.08 0.00 4.49
1274 4193 0.618458 ACATTATGTCCAGCCCACGT 59.382 50.000 0.00 0.00 0.00 4.49
1275 4194 1.670811 GAACATTATGTCCAGCCCACG 59.329 52.381 0.00 0.00 0.00 4.94
1276 4195 1.670811 CGAACATTATGTCCAGCCCAC 59.329 52.381 0.00 0.00 0.00 4.61
1277 4196 1.557371 TCGAACATTATGTCCAGCCCA 59.443 47.619 0.00 0.00 0.00 5.36
1278 4197 2.325583 TCGAACATTATGTCCAGCCC 57.674 50.000 0.00 0.00 0.00 5.19
1279 4198 5.106555 CCATATTCGAACATTATGTCCAGCC 60.107 44.000 0.00 0.00 0.00 4.85
1280 4199 5.700832 TCCATATTCGAACATTATGTCCAGC 59.299 40.000 0.00 0.00 0.00 4.85
1281 4200 7.095060 CCTTCCATATTCGAACATTATGTCCAG 60.095 40.741 0.00 1.27 0.00 3.86
1282 4201 6.710295 CCTTCCATATTCGAACATTATGTCCA 59.290 38.462 0.00 0.00 0.00 4.02
1283 4202 6.934645 TCCTTCCATATTCGAACATTATGTCC 59.065 38.462 0.00 0.00 0.00 4.02
1284 4203 7.118390 CCTCCTTCCATATTCGAACATTATGTC 59.882 40.741 0.00 0.00 0.00 3.06
1285 4204 6.936900 CCTCCTTCCATATTCGAACATTATGT 59.063 38.462 0.00 0.00 0.00 2.29
1286 4205 6.128172 GCCTCCTTCCATATTCGAACATTATG 60.128 42.308 0.00 5.12 0.00 1.90
1287 4206 5.940470 GCCTCCTTCCATATTCGAACATTAT 59.060 40.000 0.00 0.00 0.00 1.28
1288 4207 5.163248 TGCCTCCTTCCATATTCGAACATTA 60.163 40.000 0.00 0.00 0.00 1.90
1289 4208 4.137543 GCCTCCTTCCATATTCGAACATT 58.862 43.478 0.00 0.00 0.00 2.71
1290 4209 3.136443 TGCCTCCTTCCATATTCGAACAT 59.864 43.478 0.00 0.00 0.00 2.71
1291 4210 2.503765 TGCCTCCTTCCATATTCGAACA 59.496 45.455 0.00 0.00 0.00 3.18
1292 4211 2.872858 GTGCCTCCTTCCATATTCGAAC 59.127 50.000 0.00 0.00 0.00 3.95
1293 4212 2.158813 GGTGCCTCCTTCCATATTCGAA 60.159 50.000 0.00 0.00 0.00 3.71
1294 4213 1.416401 GGTGCCTCCTTCCATATTCGA 59.584 52.381 0.00 0.00 0.00 3.71
1295 4214 1.873903 CGGTGCCTCCTTCCATATTCG 60.874 57.143 0.00 0.00 0.00 3.34
1296 4215 1.141053 ACGGTGCCTCCTTCCATATTC 59.859 52.381 0.00 0.00 0.00 1.75
1297 4216 1.213296 ACGGTGCCTCCTTCCATATT 58.787 50.000 0.00 0.00 0.00 1.28
1298 4217 2.097110 TACGGTGCCTCCTTCCATAT 57.903 50.000 0.00 0.00 0.00 1.78
1299 4218 2.097110 ATACGGTGCCTCCTTCCATA 57.903 50.000 0.00 0.00 0.00 2.74
1300 4219 1.213296 AATACGGTGCCTCCTTCCAT 58.787 50.000 0.00 0.00 0.00 3.41
1301 4220 0.988832 AAATACGGTGCCTCCTTCCA 59.011 50.000 0.00 0.00 0.00 3.53
1302 4221 1.379527 CAAATACGGTGCCTCCTTCC 58.620 55.000 0.00 0.00 0.00 3.46
1303 4222 0.733150 GCAAATACGGTGCCTCCTTC 59.267 55.000 0.00 0.00 35.91 3.46
1304 4223 0.037590 TGCAAATACGGTGCCTCCTT 59.962 50.000 0.00 0.00 41.49 3.36
1305 4224 0.255890 ATGCAAATACGGTGCCTCCT 59.744 50.000 0.00 0.00 41.49 3.69
1306 4225 0.381801 CATGCAAATACGGTGCCTCC 59.618 55.000 0.00 0.00 41.49 4.30
1307 4226 0.381801 CCATGCAAATACGGTGCCTC 59.618 55.000 0.00 0.00 41.49 4.70
1308 4227 1.666209 GCCATGCAAATACGGTGCCT 61.666 55.000 0.00 0.00 41.49 4.75
1309 4228 1.226945 GCCATGCAAATACGGTGCC 60.227 57.895 0.00 0.00 41.49 5.01
1310 4229 1.226945 GGCCATGCAAATACGGTGC 60.227 57.895 0.00 0.00 42.55 5.01
1311 4230 1.063972 CGGCCATGCAAATACGGTG 59.936 57.895 2.24 0.00 0.00 4.94
1312 4231 2.118404 CCGGCCATGCAAATACGGT 61.118 57.895 2.24 0.00 36.78 4.83
1313 4232 1.821759 TCCGGCCATGCAAATACGG 60.822 57.895 14.65 14.65 42.45 4.02
1314 4233 1.355210 GTCCGGCCATGCAAATACG 59.645 57.895 2.24 0.00 0.00 3.06
1315 4234 0.814457 TTGTCCGGCCATGCAAATAC 59.186 50.000 2.24 0.00 0.00 1.89
1316 4235 1.102154 CTTGTCCGGCCATGCAAATA 58.898 50.000 2.24 0.00 0.00 1.40
1317 4236 0.899717 ACTTGTCCGGCCATGCAAAT 60.900 50.000 2.24 0.00 0.00 2.32
1318 4237 1.112315 AACTTGTCCGGCCATGCAAA 61.112 50.000 2.24 0.00 0.00 3.68
1319 4238 1.523154 GAACTTGTCCGGCCATGCAA 61.523 55.000 2.24 2.96 0.00 4.08
1320 4239 1.971167 GAACTTGTCCGGCCATGCA 60.971 57.895 2.24 0.00 0.00 3.96
1321 4240 2.877691 GAACTTGTCCGGCCATGC 59.122 61.111 2.24 0.00 0.00 4.06
1322 4241 1.361668 CTCGAACTTGTCCGGCCATG 61.362 60.000 2.24 0.00 0.00 3.66
1323 4242 1.079127 CTCGAACTTGTCCGGCCAT 60.079 57.895 2.24 0.00 0.00 4.40
1324 4243 2.342279 CTCGAACTTGTCCGGCCA 59.658 61.111 2.24 0.00 0.00 5.36
1325 4244 3.119096 GCTCGAACTTGTCCGGCC 61.119 66.667 0.00 0.00 0.00 6.13
1326 4245 3.479269 CGCTCGAACTTGTCCGGC 61.479 66.667 0.00 0.00 0.00 6.13
1327 4246 2.049433 ACGCTCGAACTTGTCCGG 60.049 61.111 0.00 0.00 0.00 5.14
1328 4247 1.337817 CTGACGCTCGAACTTGTCCG 61.338 60.000 0.00 0.00 0.00 4.79
1329 4248 0.318784 ACTGACGCTCGAACTTGTCC 60.319 55.000 0.00 0.00 0.00 4.02
1330 4249 1.488527 AACTGACGCTCGAACTTGTC 58.511 50.000 0.00 0.00 0.00 3.18
1331 4250 1.935933 AAACTGACGCTCGAACTTGT 58.064 45.000 0.00 0.00 0.00 3.16
1332 4251 2.030457 ACAAAACTGACGCTCGAACTTG 59.970 45.455 0.00 0.00 0.00 3.16
1333 4252 2.030457 CACAAAACTGACGCTCGAACTT 59.970 45.455 0.00 0.00 0.00 2.66
1334 4253 1.593006 CACAAAACTGACGCTCGAACT 59.407 47.619 0.00 0.00 0.00 3.01
1335 4254 1.326548 ACACAAAACTGACGCTCGAAC 59.673 47.619 0.00 0.00 0.00 3.95
1336 4255 1.647346 ACACAAAACTGACGCTCGAA 58.353 45.000 0.00 0.00 0.00 3.71
1337 4256 2.495409 TACACAAAACTGACGCTCGA 57.505 45.000 0.00 0.00 0.00 4.04
1338 4257 3.788434 AATACACAAAACTGACGCTCG 57.212 42.857 0.00 0.00 0.00 5.03
1339 4258 4.146443 GCAAAATACACAAAACTGACGCTC 59.854 41.667 0.00 0.00 0.00 5.03
1340 4259 4.041723 GCAAAATACACAAAACTGACGCT 58.958 39.130 0.00 0.00 0.00 5.07
1341 4260 3.794028 TGCAAAATACACAAAACTGACGC 59.206 39.130 0.00 0.00 0.00 5.19
1342 4261 5.514914 AGTTGCAAAATACACAAAACTGACG 59.485 36.000 0.00 0.00 0.00 4.35
1343 4262 6.885735 AGTTGCAAAATACACAAAACTGAC 57.114 33.333 0.00 0.00 0.00 3.51
1344 4263 7.897575 AAAGTTGCAAAATACACAAAACTGA 57.102 28.000 0.00 0.00 0.00 3.41
1345 4264 9.081997 TCTAAAGTTGCAAAATACACAAAACTG 57.918 29.630 0.00 0.00 0.00 3.16
1346 4265 9.083080 GTCTAAAGTTGCAAAATACACAAAACT 57.917 29.630 0.00 0.00 0.00 2.66
1347 4266 8.865001 TGTCTAAAGTTGCAAAATACACAAAAC 58.135 29.630 0.00 0.00 0.00 2.43
1348 4267 8.865001 GTGTCTAAAGTTGCAAAATACACAAAA 58.135 29.630 0.00 0.00 35.83 2.44
1349 4268 7.489757 GGTGTCTAAAGTTGCAAAATACACAAA 59.510 33.333 20.58 0.00 37.13 2.83
1350 4269 6.975772 GGTGTCTAAAGTTGCAAAATACACAA 59.024 34.615 20.58 0.00 37.13 3.33
1351 4270 6.095580 TGGTGTCTAAAGTTGCAAAATACACA 59.904 34.615 20.58 10.71 37.13 3.72
1352 4271 6.500041 TGGTGTCTAAAGTTGCAAAATACAC 58.500 36.000 0.00 10.00 35.21 2.90
1353 4272 6.701145 TGGTGTCTAAAGTTGCAAAATACA 57.299 33.333 0.00 0.00 0.00 2.29
1354 4273 7.704899 AGTTTGGTGTCTAAAGTTGCAAAATAC 59.295 33.333 0.00 0.00 0.00 1.89
1355 4274 7.704472 CAGTTTGGTGTCTAAAGTTGCAAAATA 59.296 33.333 0.00 0.00 0.00 1.40
1356 4275 6.534793 CAGTTTGGTGTCTAAAGTTGCAAAAT 59.465 34.615 0.00 0.00 0.00 1.82
1357 4276 5.866633 CAGTTTGGTGTCTAAAGTTGCAAAA 59.133 36.000 0.00 0.00 0.00 2.44
1358 4277 5.184096 TCAGTTTGGTGTCTAAAGTTGCAAA 59.816 36.000 0.00 0.00 0.00 3.68
1359 4278 4.702612 TCAGTTTGGTGTCTAAAGTTGCAA 59.297 37.500 0.00 0.00 0.00 4.08
1360 4279 4.095782 GTCAGTTTGGTGTCTAAAGTTGCA 59.904 41.667 0.00 0.00 0.00 4.08
1361 4280 4.497507 GGTCAGTTTGGTGTCTAAAGTTGC 60.498 45.833 0.00 0.00 0.00 4.17
1362 4281 4.260620 CGGTCAGTTTGGTGTCTAAAGTTG 60.261 45.833 0.00 0.00 0.00 3.16
1363 4282 3.875134 CGGTCAGTTTGGTGTCTAAAGTT 59.125 43.478 0.00 0.00 0.00 2.66
1364 4283 3.118519 ACGGTCAGTTTGGTGTCTAAAGT 60.119 43.478 0.00 0.00 0.00 2.66
1365 4284 3.247648 CACGGTCAGTTTGGTGTCTAAAG 59.752 47.826 0.00 0.00 0.00 1.85
1366 4285 3.199677 CACGGTCAGTTTGGTGTCTAAA 58.800 45.455 0.00 0.00 0.00 1.85
1367 4286 2.828877 CACGGTCAGTTTGGTGTCTAA 58.171 47.619 0.00 0.00 0.00 2.10
1368 4287 1.539496 GCACGGTCAGTTTGGTGTCTA 60.539 52.381 0.00 0.00 33.09 2.59
1369 4288 0.814010 GCACGGTCAGTTTGGTGTCT 60.814 55.000 0.00 0.00 33.09 3.41
1370 4289 1.092921 TGCACGGTCAGTTTGGTGTC 61.093 55.000 0.00 0.00 33.09 3.67
1371 4290 0.678366 TTGCACGGTCAGTTTGGTGT 60.678 50.000 0.00 0.00 33.09 4.16
1372 4291 0.029300 CTTGCACGGTCAGTTTGGTG 59.971 55.000 0.00 0.00 0.00 4.17
1373 4292 0.107410 TCTTGCACGGTCAGTTTGGT 60.107 50.000 0.00 0.00 0.00 3.67
1374 4293 0.307760 GTCTTGCACGGTCAGTTTGG 59.692 55.000 0.00 0.00 0.00 3.28
1375 4294 1.013596 TGTCTTGCACGGTCAGTTTG 58.986 50.000 0.00 0.00 0.00 2.93
1376 4295 1.745232 TTGTCTTGCACGGTCAGTTT 58.255 45.000 0.00 0.00 0.00 2.66
1377 4296 1.745232 TTTGTCTTGCACGGTCAGTT 58.255 45.000 0.00 0.00 0.00 3.16
1378 4297 1.967319 ATTTGTCTTGCACGGTCAGT 58.033 45.000 0.00 0.00 0.00 3.41
1379 4298 2.290367 TCAATTTGTCTTGCACGGTCAG 59.710 45.455 0.00 0.00 0.00 3.51
1380 4299 2.293170 TCAATTTGTCTTGCACGGTCA 58.707 42.857 0.00 0.00 0.00 4.02
1381 4300 3.300009 CTTCAATTTGTCTTGCACGGTC 58.700 45.455 0.00 0.00 0.00 4.79
1382 4301 2.543653 GCTTCAATTTGTCTTGCACGGT 60.544 45.455 0.00 0.00 0.00 4.83
1383 4302 2.053627 GCTTCAATTTGTCTTGCACGG 58.946 47.619 0.00 0.00 0.00 4.94
1384 4303 2.468777 GTGCTTCAATTTGTCTTGCACG 59.531 45.455 16.09 0.00 39.54 5.34
1385 4304 3.709987 AGTGCTTCAATTTGTCTTGCAC 58.290 40.909 19.85 19.85 46.38 4.57
1386 4305 4.362279 GAAGTGCTTCAATTTGTCTTGCA 58.638 39.130 7.03 0.00 39.31 4.08
1387 4306 3.737774 GGAAGTGCTTCAATTTGTCTTGC 59.262 43.478 13.16 0.00 41.20 4.01
1388 4307 4.935702 TGGAAGTGCTTCAATTTGTCTTG 58.064 39.130 13.16 0.00 41.20 3.02
1389 4308 5.192327 CTGGAAGTGCTTCAATTTGTCTT 57.808 39.130 13.16 0.00 41.20 3.01
1390 4309 4.843220 CTGGAAGTGCTTCAATTTGTCT 57.157 40.909 13.16 0.00 41.20 3.41
1492 4414 2.160417 GCCCGATTGTTAGCTATCATGC 59.840 50.000 5.35 0.00 0.00 4.06
1496 4418 3.386768 TCAGCCCGATTGTTAGCTATC 57.613 47.619 0.00 0.00 33.33 2.08
1500 4422 1.668419 ACATCAGCCCGATTGTTAGC 58.332 50.000 0.00 0.00 29.21 3.09
1510 4432 8.250332 TCTGAATTTTATTTACAACATCAGCCC 58.750 33.333 0.00 0.00 33.55 5.19
1511 4433 9.294030 CTCTGAATTTTATTTACAACATCAGCC 57.706 33.333 0.00 0.00 33.55 4.85
1514 4436 8.801299 TGCCTCTGAATTTTATTTACAACATCA 58.199 29.630 0.00 0.00 0.00 3.07
1569 4491 2.386661 ACCAAGGCTTGAGTGATACG 57.613 50.000 28.18 11.17 0.00 3.06
1595 4517 2.851263 ATGTTCTGCCGTACCTGAAA 57.149 45.000 0.00 0.00 0.00 2.69
5915 15271 3.168292 TCAGATCCAGTGCTTTGAGAGA 58.832 45.455 0.00 0.00 0.00 3.10
5916 15272 3.606595 TCAGATCCAGTGCTTTGAGAG 57.393 47.619 0.00 0.00 0.00 3.20
6174 15586 8.186821 CACCTTCTGCTTCTTCCTTTATTATTG 58.813 37.037 0.00 0.00 0.00 1.90
6180 15592 4.974645 TCACCTTCTGCTTCTTCCTTTA 57.025 40.909 0.00 0.00 0.00 1.85
6251 15663 5.675684 TGTGCTACAATCTAGAATGTCCA 57.324 39.130 16.69 12.27 0.00 4.02
6332 15768 3.499338 TCTGTCCCACAGCAAATGAATT 58.501 40.909 0.00 0.00 45.54 2.17
6377 15813 2.350863 AGTCTGATTTCCACCTCCCT 57.649 50.000 0.00 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.