Multiple sequence alignment - TraesCS1D01G029400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G029400 chr1D 100.000 7987 0 0 1 7987 11551513 11543527 0.000000e+00 14750.0
1 TraesCS1D01G029400 chr1D 91.710 193 12 4 5078 5268 201728843 201728653 1.710000e-66 265.0
2 TraesCS1D01G029400 chr1A 92.298 2415 94 30 5242 7605 13672205 13669832 0.000000e+00 3345.0
3 TraesCS1D01G029400 chr1A 89.981 2126 147 28 1920 4010 13675229 13673135 0.000000e+00 2686.0
4 TraesCS1D01G029400 chr1A 89.268 1435 66 22 441 1843 13676745 13675367 0.000000e+00 1716.0
5 TraesCS1D01G029400 chr1A 97.988 845 17 0 4236 5080 13673048 13672204 0.000000e+00 1467.0
6 TraesCS1D01G029400 chr1A 83.184 446 49 18 4 442 13677199 13676773 1.260000e-102 385.0
7 TraesCS1D01G029400 chr1A 87.926 323 25 10 7667 7987 13420145 13419835 1.270000e-97 368.0
8 TraesCS1D01G029400 chr1A 88.103 311 25 4 7325 7629 13420445 13420141 7.620000e-95 359.0
9 TraesCS1D01G029400 chr1A 94.944 178 6 3 5078 5254 233421341 233421516 7.900000e-70 276.0
10 TraesCS1D01G029400 chr1A 93.048 187 11 2 7739 7923 13669829 13669643 1.020000e-68 272.0
11 TraesCS1D01G029400 chr1B 89.070 1958 106 38 6083 7982 17353217 17351310 0.000000e+00 2331.0
12 TraesCS1D01G029400 chr1B 93.959 1556 50 24 6471 7987 16914927 16913377 0.000000e+00 2313.0
13 TraesCS1D01G029400 chr1B 89.068 1866 116 33 6157 7982 16851518 16849701 0.000000e+00 2235.0
14 TraesCS1D01G029400 chr1B 91.267 1649 100 24 1920 3559 17357461 17355848 0.000000e+00 2207.0
15 TraesCS1D01G029400 chr1B 87.821 1051 62 15 1 1035 17359594 17358594 0.000000e+00 1171.0
16 TraesCS1D01G029400 chr1B 91.412 850 66 4 5248 6094 17354383 17353538 0.000000e+00 1158.0
17 TraesCS1D01G029400 chr1B 96.129 620 21 3 2952 3568 16922339 16921720 0.000000e+00 1009.0
18 TraesCS1D01G029400 chr1B 90.762 682 39 10 1183 1843 17358275 17357597 0.000000e+00 889.0
19 TraesCS1D01G029400 chr1B 92.535 576 25 6 5248 5807 16920252 16919679 0.000000e+00 809.0
20 TraesCS1D01G029400 chr1B 89.655 609 37 10 5892 6475 16919680 16919073 0.000000e+00 752.0
21 TraesCS1D01G029400 chr1B 90.288 556 39 11 4168 4720 16921442 16920899 0.000000e+00 713.0
22 TraesCS1D01G029400 chr1B 90.270 555 38 12 4168 4720 17355563 17355023 0.000000e+00 712.0
23 TraesCS1D01G029400 chr1B 88.235 323 24 7 7667 7987 16742164 16741854 2.720000e-99 374.0
24 TraesCS1D01G029400 chr1B 88.746 311 23 4 7325 7629 16742464 16742160 3.520000e-98 370.0
25 TraesCS1D01G029400 chr3A 84.941 591 46 23 7049 7606 750729541 750728961 7.000000e-155 558.0
26 TraesCS1D01G029400 chr3A 78.431 357 60 12 4363 4714 740353103 740352759 4.850000e-52 217.0
27 TraesCS1D01G029400 chr3A 79.433 282 41 13 1000 1277 740356497 740356229 4.920000e-42 183.0
28 TraesCS1D01G029400 chr3A 85.496 131 15 4 6902 7031 750730107 750729980 5.030000e-27 134.0
29 TraesCS1D01G029400 chr3A 79.235 183 38 0 6680 6862 609956031 609956213 2.340000e-25 128.0
30 TraesCS1D01G029400 chr3A 83.478 115 11 4 6643 6749 750730365 750730251 5.100000e-17 100.0
31 TraesCS1D01G029400 chr3B 80.472 466 67 17 5290 5754 817823882 817823440 1.280000e-87 335.0
32 TraesCS1D01G029400 chr3B 97.024 168 3 2 5079 5245 655849421 655849587 1.700000e-71 281.0
33 TraesCS1D01G029400 chr3B 85.417 192 28 0 6679 6870 817822329 817822138 4.890000e-47 200.0
34 TraesCS1D01G029400 chr3B 77.591 357 63 15 4363 4714 817824720 817824376 4.890000e-47 200.0
35 TraesCS1D01G029400 chr3B 79.298 285 42 12 1000 1277 817828165 817827891 4.920000e-42 183.0
36 TraesCS1D01G029400 chr3D 80.440 455 66 18 5290 5743 608068148 608067716 7.730000e-85 326.0
37 TraesCS1D01G029400 chr3D 77.591 357 63 15 4363 4714 608069134 608068790 4.890000e-47 200.0
38 TraesCS1D01G029400 chr3D 78.322 286 37 15 1000 1277 608072581 608072313 2.310000e-35 161.0
39 TraesCS1D01G029400 chr4B 90.870 230 18 2 5390 5619 406211170 406211396 1.010000e-78 305.0
40 TraesCS1D01G029400 chr4B 89.256 121 13 0 5242 5362 406211053 406211173 1.390000e-32 152.0
41 TraesCS1D01G029400 chr4B 96.000 50 2 0 6058 6107 28151022 28150973 1.850000e-11 82.4
42 TraesCS1D01G029400 chr5A 95.028 181 6 3 5069 5248 349787525 349787347 1.700000e-71 281.0
43 TraesCS1D01G029400 chr5A 96.471 170 4 2 5078 5246 290391696 290391864 6.100000e-71 279.0
44 TraesCS1D01G029400 chr5A 79.592 147 26 4 4383 4527 484080641 484080497 1.420000e-17 102.0
45 TraesCS1D01G029400 chr7A 95.954 173 5 2 5072 5243 115807516 115807687 6.100000e-71 279.0
46 TraesCS1D01G029400 chr7A 85.156 128 17 2 5981 6107 130231539 130231665 6.500000e-26 130.0
47 TraesCS1D01G029400 chr4D 95.455 176 6 2 5073 5247 93338036 93338210 6.100000e-71 279.0
48 TraesCS1D01G029400 chr2D 95.429 175 5 3 5072 5245 426427971 426427799 7.900000e-70 276.0
49 TraesCS1D01G029400 chr2D 94.737 38 2 0 5904 5941 64064050 64064013 8.660000e-05 60.2
50 TraesCS1D01G029400 chr6D 93.989 183 7 4 5062 5243 392896960 392897139 2.840000e-69 274.0
51 TraesCS1D01G029400 chr7D 83.582 134 17 2 5975 6107 131468450 131468579 3.910000e-23 121.0
52 TraesCS1D01G029400 chr7B 82.836 134 18 2 5975 6107 92319477 92319606 1.820000e-21 115.0
53 TraesCS1D01G029400 chr5D 79.592 147 26 4 4383 4527 383778009 383777865 1.420000e-17 102.0
54 TraesCS1D01G029400 chr5B 78.912 147 27 4 4383 4527 460267527 460267383 6.600000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G029400 chr1D 11543527 11551513 7986 True 14750.000000 14750 100.000000 1 7987 1 chr1D.!!$R1 7986
1 TraesCS1D01G029400 chr1A 13669643 13677199 7556 True 1645.166667 3345 90.961167 4 7923 6 chr1A.!!$R2 7919
2 TraesCS1D01G029400 chr1A 13419835 13420445 610 True 363.500000 368 88.014500 7325 7987 2 chr1A.!!$R1 662
3 TraesCS1D01G029400 chr1B 16913377 16914927 1550 True 2313.000000 2313 93.959000 6471 7987 1 chr1B.!!$R2 1516
4 TraesCS1D01G029400 chr1B 16849701 16851518 1817 True 2235.000000 2235 89.068000 6157 7982 1 chr1B.!!$R1 1825
5 TraesCS1D01G029400 chr1B 17351310 17359594 8284 True 1411.333333 2331 90.100333 1 7982 6 chr1B.!!$R5 7981
6 TraesCS1D01G029400 chr1B 16919073 16922339 3266 True 820.750000 1009 92.151750 2952 6475 4 chr1B.!!$R4 3523
7 TraesCS1D01G029400 chr1B 16741854 16742464 610 True 372.000000 374 88.490500 7325 7987 2 chr1B.!!$R3 662
8 TraesCS1D01G029400 chr3A 750728961 750730365 1404 True 264.000000 558 84.638333 6643 7606 3 chr3A.!!$R2 963
9 TraesCS1D01G029400 chr3B 817822138 817828165 6027 True 229.500000 335 80.694500 1000 6870 4 chr3B.!!$R1 5870
10 TraesCS1D01G029400 chr3D 608067716 608072581 4865 True 229.000000 326 78.784333 1000 5743 3 chr3D.!!$R1 4743

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
111 115 0.306533 GCCACGTACGCCCATTTATG 59.693 55.000 16.72 3.06 0.00 1.90 F
1438 1715 1.003718 GTGGTGGTTCCTTCCTCCG 60.004 63.158 0.00 0.00 42.19 4.63 F
2037 2595 0.172578 CGTCTTATCCGCTGTGACCA 59.827 55.000 0.00 0.00 0.00 4.02 F
2848 4389 1.005394 GAAACGTCCCGAGCAAGGA 60.005 57.895 0.00 0.00 0.00 3.36 F
3872 5453 0.733150 GCACGGTAATCCTCCTTTGC 59.267 55.000 0.00 0.00 0.00 3.68 F
4150 5735 0.108615 CCCCAGCGTGTCTAGTTCTG 60.109 60.000 0.00 0.00 0.00 3.02 F
4152 5737 0.244994 CCAGCGTGTCTAGTTCTGCT 59.755 55.000 0.00 0.00 0.00 4.24 F
4154 5739 0.389166 AGCGTGTCTAGTTCTGCTGC 60.389 55.000 0.00 0.00 0.00 5.25 F
4157 5742 1.201181 CGTGTCTAGTTCTGCTGCTCT 59.799 52.381 0.00 0.00 0.00 4.09 F
4158 5743 2.352225 CGTGTCTAGTTCTGCTGCTCTT 60.352 50.000 0.00 0.00 0.00 2.85 F
5142 7296 2.416836 GCAAGTGACTACATACGGAGCA 60.417 50.000 0.00 0.00 0.00 4.26 F
6547 9509 1.418334 ATCCTGTAGAGCGGCAGATT 58.582 50.000 1.45 0.00 34.87 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1733 2025 0.252479 ACTGAGAAGCATGCCTCCAG 59.748 55.000 22.73 22.73 0.00 3.86 R
2404 3933 0.748367 TAGCTCCAGTCTCGCGATGT 60.748 55.000 10.36 0.00 0.00 3.06 R
3656 5235 0.334335 TGCCATGCCTTGTTCCCATA 59.666 50.000 0.00 0.00 0.00 2.74 R
3974 5559 0.585838 TTGTGCAGTATGTGTGTGCG 59.414 50.000 0.00 0.00 40.23 5.34 R
5230 7384 0.032017 AGCCATCTACTCCCTCCGTT 60.032 55.000 0.00 0.00 0.00 4.44 R
5233 7387 0.105453 TCCAGCCATCTACTCCCTCC 60.105 60.000 0.00 0.00 0.00 4.30 R
5617 7787 1.065199 GGGATCATCACAGTGCTCCAA 60.065 52.381 0.00 0.00 36.38 3.53 R
6136 9061 3.461061 TCACTGCAAGACACTTGAAGAG 58.539 45.455 21.68 15.52 37.43 2.85 R
6168 9093 1.667722 GCCCAAAACAGAAGGCAGG 59.332 57.895 0.00 0.00 45.07 4.85 R
6293 9255 6.541641 GCAAAGTCCAGATCTCAGTATTCATT 59.458 38.462 0.00 0.00 0.00 2.57 R
6770 9792 0.329261 TCAGGTGGGCTTTGATCCTG 59.671 55.000 0.00 0.00 44.69 3.86 R
7728 11255 3.993081 GCATAGCCTACACATGCTCTTAG 59.007 47.826 0.00 0.00 41.44 2.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.831685 AAGCACACGGTGTATCTGAA 57.168 45.000 14.30 0.00 35.75 3.02
93 97 1.305930 AAGGATCGCTTTTGACCCGC 61.306 55.000 0.00 0.00 0.00 6.13
111 115 0.306533 GCCACGTACGCCCATTTATG 59.693 55.000 16.72 3.06 0.00 1.90
150 154 9.729281 ATTTTCTCAAAGCCAATCAACAAATAT 57.271 25.926 0.00 0.00 0.00 1.28
160 164 7.033185 GCCAATCAACAAATATACTCCGTTTT 58.967 34.615 0.00 0.00 0.00 2.43
176 180 4.756135 TCCGTTTTACGACTTGCCTATTTT 59.244 37.500 0.05 0.00 46.05 1.82
178 182 4.849383 CGTTTTACGACTTGCCTATTTTGG 59.151 41.667 0.00 0.00 46.05 3.28
184 188 3.686016 GACTTGCCTATTTTGGAGACCA 58.314 45.455 0.00 0.00 0.00 4.02
231 235 3.547214 CGGTATTGCAAGTTCAACAACGT 60.547 43.478 4.94 0.00 37.61 3.99
284 288 3.672767 AAATCTCTGGCAGCCAAAAAG 57.327 42.857 17.03 13.20 30.80 2.27
290 294 5.321102 TCTCTGGCAGCCAAAAAGTAAATA 58.679 37.500 17.03 0.00 30.80 1.40
317 321 8.463930 AGAAATAATGAAAGATTATTCCGCCA 57.536 30.769 0.00 0.00 34.25 5.69
401 407 2.680352 AGGACGGCTCACACGGAT 60.680 61.111 0.00 0.00 35.23 4.18
436 442 6.966534 AAAGAAGCTTGAAGAGGAATTTGA 57.033 33.333 2.10 0.00 0.00 2.69
437 443 5.956068 AGAAGCTTGAAGAGGAATTTGAC 57.044 39.130 2.10 0.00 0.00 3.18
438 444 4.764308 AGAAGCTTGAAGAGGAATTTGACC 59.236 41.667 2.10 0.00 0.00 4.02
439 445 4.379302 AGCTTGAAGAGGAATTTGACCT 57.621 40.909 0.00 0.00 40.80 3.85
440 446 4.077822 AGCTTGAAGAGGAATTTGACCTG 58.922 43.478 0.00 0.00 37.93 4.00
441 447 4.074970 GCTTGAAGAGGAATTTGACCTGA 58.925 43.478 0.00 0.00 37.93 3.86
442 448 4.083057 GCTTGAAGAGGAATTTGACCTGAC 60.083 45.833 0.00 0.00 37.93 3.51
443 449 4.021102 TGAAGAGGAATTTGACCTGACC 57.979 45.455 0.00 0.00 37.93 4.02
444 450 3.652869 TGAAGAGGAATTTGACCTGACCT 59.347 43.478 0.00 0.00 37.93 3.85
445 451 3.710209 AGAGGAATTTGACCTGACCTG 57.290 47.619 0.00 0.00 37.93 4.00
446 452 2.087646 GAGGAATTTGACCTGACCTGC 58.912 52.381 0.00 0.00 37.93 4.85
447 453 1.425066 AGGAATTTGACCTGACCTGCA 59.575 47.619 0.00 0.00 36.30 4.41
448 454 2.158475 AGGAATTTGACCTGACCTGCAA 60.158 45.455 0.00 0.00 36.30 4.08
449 455 2.627699 GGAATTTGACCTGACCTGCAAA 59.372 45.455 0.00 0.00 35.07 3.68
450 456 3.069443 GGAATTTGACCTGACCTGCAAAA 59.931 43.478 0.00 0.00 34.38 2.44
637 692 1.203137 TCTCTTCTTCCCCCACGAGAA 60.203 52.381 0.00 0.00 0.00 2.87
672 727 1.221840 CATTGGTAGCTGCGAGGGT 59.778 57.895 0.00 0.00 0.00 4.34
910 968 2.220470 GGGGTTTTAGGGGGATAAGGT 58.780 52.381 0.00 0.00 0.00 3.50
927 985 2.427506 AGGTTGCGGAGATCTTGTTTC 58.572 47.619 0.00 0.00 0.00 2.78
928 986 2.039084 AGGTTGCGGAGATCTTGTTTCT 59.961 45.455 0.00 0.00 0.00 2.52
929 987 2.416893 GGTTGCGGAGATCTTGTTTCTC 59.583 50.000 0.00 0.00 39.12 2.87
940 998 6.949449 AGATCTTGTTTCTCTTCGTTTGTTC 58.051 36.000 0.00 0.00 0.00 3.18
955 1013 1.065109 GTTCGTTTGGTGTGGTGGC 59.935 57.895 0.00 0.00 0.00 5.01
1438 1715 1.003718 GTGGTGGTTCCTTCCTCCG 60.004 63.158 0.00 0.00 42.19 4.63
1500 1781 9.002600 CAGCATGCTATTATTAGTATTGGTTCA 57.997 33.333 22.19 0.00 29.35 3.18
1587 1875 7.819900 GTCAACTGAATAGTCCAAGTTCATAGT 59.180 37.037 0.00 0.00 35.69 2.12
1591 1879 9.696572 ACTGAATAGTCCAAGTTCATAGTAGTA 57.303 33.333 0.00 0.00 32.05 1.82
1593 1881 9.696572 TGAATAGTCCAAGTTCATAGTAGTAGT 57.303 33.333 0.00 0.00 0.00 2.73
1676 1964 5.038683 TCATACGGTTAACTGAATAGTGCG 58.961 41.667 21.29 7.43 37.19 5.34
1678 1966 3.508762 ACGGTTAACTGAATAGTGCGAG 58.491 45.455 21.29 0.00 37.19 5.03
1679 1967 2.281762 CGGTTAACTGAATAGTGCGAGC 59.718 50.000 8.90 0.00 37.19 5.03
1687 1979 3.706698 TGAATAGTGCGAGCTCATACAC 58.293 45.455 15.40 17.50 0.00 2.90
1724 2016 2.925306 GCTCCTGCAGCTGTTTGATTTG 60.925 50.000 16.64 0.07 45.83 2.32
1733 2025 2.663119 GCTGTTTGATTTGTCGATTGGC 59.337 45.455 0.00 0.00 0.00 4.52
1832 2239 3.619038 CAGAAGGGCGACTATTCAGTTTC 59.381 47.826 9.04 0.00 34.21 2.78
1861 2291 4.159693 TGGATTCTCAGCTAGCGTTTCTTA 59.840 41.667 9.55 0.00 0.00 2.10
1869 2299 3.673809 AGCTAGCGTTTCTTACTTTCGTG 59.326 43.478 9.55 0.00 0.00 4.35
1870 2300 3.671928 GCTAGCGTTTCTTACTTTCGTGA 59.328 43.478 0.00 0.00 0.00 4.35
1875 2305 4.839174 GCGTTTCTTACTTTCGTGACATTC 59.161 41.667 0.00 0.00 0.00 2.67
1906 2336 7.012989 GGATGGGTTATTGTAACTGTTATCACC 59.987 40.741 3.23 5.95 0.00 4.02
1958 2428 7.724287 TCTCTGAATTTACTGGATCATGAGAG 58.276 38.462 0.09 0.00 30.22 3.20
1979 2449 7.069208 TGAGAGATATTGTCTAGTGCTTCACAT 59.931 37.037 0.00 0.00 37.29 3.21
1987 2457 5.007626 TGTCTAGTGCTTCACATTGTTTCAC 59.992 40.000 0.00 0.00 36.74 3.18
1990 2460 6.989759 TCTAGTGCTTCACATTGTTTCACTTA 59.010 34.615 12.29 3.57 36.74 2.24
1994 2464 8.239314 AGTGCTTCACATTGTTTCACTTATATG 58.761 33.333 0.00 0.00 36.74 1.78
2011 2482 4.644103 ATATGAAGCTGTTTGTGCATCC 57.356 40.909 0.00 0.00 0.00 3.51
2025 2583 1.502231 GCATCCATGCGTCGTCTTAT 58.498 50.000 0.00 0.00 44.67 1.73
2029 2587 1.548973 CCATGCGTCGTCTTATCCGC 61.549 60.000 0.00 0.00 45.92 5.54
2030 2588 0.595053 CATGCGTCGTCTTATCCGCT 60.595 55.000 0.00 0.00 45.90 5.52
2031 2589 0.595053 ATGCGTCGTCTTATCCGCTG 60.595 55.000 0.00 0.00 45.90 5.18
2032 2590 1.226603 GCGTCGTCTTATCCGCTGT 60.227 57.895 0.00 0.00 42.66 4.40
2033 2591 1.472276 GCGTCGTCTTATCCGCTGTG 61.472 60.000 0.00 0.00 42.66 3.66
2035 2593 1.546834 GTCGTCTTATCCGCTGTGAC 58.453 55.000 0.00 0.00 0.00 3.67
2036 2594 0.454600 TCGTCTTATCCGCTGTGACC 59.545 55.000 0.00 0.00 0.00 4.02
2037 2595 0.172578 CGTCTTATCCGCTGTGACCA 59.827 55.000 0.00 0.00 0.00 4.02
2057 2618 4.065088 CCAGCAAGTACTTGTTCTAGCAA 58.935 43.478 30.90 0.00 42.31 3.91
2073 2634 8.682710 TGTTCTAGCAAGTTTATTTCAGTTTGT 58.317 29.630 0.00 0.00 0.00 2.83
2089 2650 4.746115 CAGTTTGTGATTTGTGTTGGATGG 59.254 41.667 0.00 0.00 0.00 3.51
2134 2695 6.227522 AGTAGAGAGAAGCTTCCAAACTTTC 58.772 40.000 22.81 11.71 0.00 2.62
2135 2696 5.041191 AGAGAGAAGCTTCCAAACTTTCA 57.959 39.130 22.81 0.00 0.00 2.69
2137 2698 3.885901 AGAGAAGCTTCCAAACTTTCACC 59.114 43.478 22.81 0.00 0.00 4.02
2140 2701 3.018423 AGCTTCCAAACTTTCACCAGT 57.982 42.857 0.00 0.00 0.00 4.00
2141 2702 4.164843 AGCTTCCAAACTTTCACCAGTA 57.835 40.909 0.00 0.00 0.00 2.74
2144 2705 5.061179 GCTTCCAAACTTTCACCAGTAGTA 58.939 41.667 0.00 0.00 0.00 1.82
2145 2706 5.705905 GCTTCCAAACTTTCACCAGTAGTAT 59.294 40.000 0.00 0.00 0.00 2.12
2174 3105 7.930325 ACTACACTAATCCTGATCATGTTCATG 59.070 37.037 6.92 6.46 0.00 3.07
2198 3129 2.636830 CATCTGTCCTGGTTCCATGTC 58.363 52.381 0.00 0.00 0.00 3.06
2224 3155 5.376854 ACTGCAAACAATCTAATGTGACC 57.623 39.130 0.00 0.00 32.81 4.02
2228 3159 6.815089 TGCAAACAATCTAATGTGACCTTTT 58.185 32.000 0.00 0.00 32.81 2.27
2503 4032 3.002965 AGTTGTCATCACATGCATATGCG 59.997 43.478 22.21 11.74 45.83 4.73
2548 4077 2.558380 GAAGTGCATCCCCAGACCCC 62.558 65.000 0.00 0.00 0.00 4.95
2848 4389 1.005394 GAAACGTCCCGAGCAAGGA 60.005 57.895 0.00 0.00 0.00 3.36
2910 4460 9.503399 TTCTATGATGAGAAATCAGATGAATGG 57.497 33.333 0.00 0.00 32.46 3.16
2940 4490 6.243900 ACTTCACATCATCTGACAATTCCTT 58.756 36.000 0.00 0.00 0.00 3.36
3178 4740 3.515502 CCAGTGGACATCTAGGAAGTTCA 59.484 47.826 1.68 0.00 0.00 3.18
3394 4956 4.439057 CATCAGGCATGAGAAATTTTGGG 58.561 43.478 7.33 0.00 39.29 4.12
3442 5004 2.041620 CCTGGTTGGAAAGATGGAAGGA 59.958 50.000 0.00 0.00 38.35 3.36
3499 5061 6.039717 AGAGCAACAAAAGCAGAACTTATGAA 59.960 34.615 0.00 0.00 37.75 2.57
3552 5114 5.934625 AGTTCAGGTACACTTCTGCATTAAG 59.065 40.000 7.26 7.26 0.00 1.85
3554 5116 6.599356 TCAGGTACACTTCTGCATTAAGTA 57.401 37.500 12.72 0.00 35.44 2.24
3557 5119 8.924303 TCAGGTACACTTCTGCATTAAGTATAT 58.076 33.333 12.72 6.24 35.44 0.86
3558 5120 8.982685 CAGGTACACTTCTGCATTAAGTATATG 58.017 37.037 12.72 5.42 35.44 1.78
3559 5121 8.705594 AGGTACACTTCTGCATTAAGTATATGT 58.294 33.333 12.72 9.83 35.44 2.29
3560 5122 8.765219 GGTACACTTCTGCATTAAGTATATGTG 58.235 37.037 12.72 5.23 35.44 3.21
3563 5125 9.265901 ACACTTCTGCATTAAGTATATGTGATC 57.734 33.333 12.72 0.00 35.44 2.92
3586 5148 9.817365 GATCATTAGTATGACATAACAACATGC 57.183 33.333 0.00 0.00 43.29 4.06
3599 5178 3.690422 ACAACATGCAAACTGTAACACG 58.310 40.909 0.00 0.00 0.00 4.49
3619 5198 4.187594 CGCAAGTGCATCATACAGTTAG 57.812 45.455 3.87 0.00 42.21 2.34
3629 5208 6.816640 TGCATCATACAGTTAGTGTTACTTCC 59.183 38.462 0.00 0.00 40.94 3.46
3636 5215 7.592885 ACAGTTAGTGTTACTTCCTAGTCAA 57.407 36.000 0.00 0.00 34.94 3.18
3642 5221 7.086230 AGTGTTACTTCCTAGTCAATAGTCG 57.914 40.000 0.00 0.00 35.78 4.18
3656 5235 7.331791 AGTCAATAGTCGGAGCTATTTCTTTT 58.668 34.615 8.94 0.00 39.02 2.27
3701 5280 7.047271 TGAACTGCTATACTGCATACATGAAA 58.953 34.615 0.00 0.00 42.48 2.69
3787 5366 7.982354 AGATTGTTTCTACAGCCTAGTGATAAC 59.018 37.037 0.00 0.00 35.28 1.89
3857 5438 3.564511 CAAATACCCAACAGAAAGCACG 58.435 45.455 0.00 0.00 0.00 5.34
3858 5439 1.821216 ATACCCAACAGAAAGCACGG 58.179 50.000 0.00 0.00 0.00 4.94
3872 5453 0.733150 GCACGGTAATCCTCCTTTGC 59.267 55.000 0.00 0.00 0.00 3.68
3875 5456 2.420022 CACGGTAATCCTCCTTTGCTTG 59.580 50.000 0.00 0.00 0.00 4.01
3881 5466 3.515602 ATCCTCCTTTGCTTGTTCTGT 57.484 42.857 0.00 0.00 0.00 3.41
3893 5478 6.304356 TGCTTGTTCTGTTCACTCAAATAG 57.696 37.500 0.00 0.00 0.00 1.73
3927 5512 4.840716 TGGCCATTCCATTTTAGCAAAT 57.159 36.364 0.00 0.00 40.72 2.32
3962 5547 4.263905 TGTTTCTATGCCCCTCTCAAATGT 60.264 41.667 0.00 0.00 0.00 2.71
3966 5551 0.895100 TGCCCCTCTCAAATGTGCAC 60.895 55.000 10.75 10.75 0.00 4.57
3994 5579 1.660052 CGCACACACATACTGCACAAC 60.660 52.381 0.00 0.00 0.00 3.32
3997 5582 2.480037 CACACACATACTGCACAACGAT 59.520 45.455 0.00 0.00 0.00 3.73
4000 5585 2.995939 ACACATACTGCACAACGATGAG 59.004 45.455 0.00 0.00 0.00 2.90
4001 5586 2.002586 ACATACTGCACAACGATGAGC 58.997 47.619 8.12 8.12 42.66 4.26
4012 5597 7.141651 GCACAACGATGAGCAAAATTATAAG 57.858 36.000 10.07 0.00 42.02 1.73
4015 5600 7.162546 CACAACGATGAGCAAAATTATAAGACG 59.837 37.037 0.00 0.00 0.00 4.18
4017 5602 7.997107 ACGATGAGCAAAATTATAAGACGTA 57.003 32.000 0.00 0.00 0.00 3.57
4018 5603 8.415192 ACGATGAGCAAAATTATAAGACGTAA 57.585 30.769 0.00 0.00 0.00 3.18
4019 5604 9.042008 ACGATGAGCAAAATTATAAGACGTAAT 57.958 29.630 0.00 0.00 0.00 1.89
4020 5605 9.306280 CGATGAGCAAAATTATAAGACGTAATG 57.694 33.333 0.00 0.00 0.00 1.90
4021 5606 9.107367 GATGAGCAAAATTATAAGACGTAATGC 57.893 33.333 0.00 0.00 0.00 3.56
4022 5607 8.208718 TGAGCAAAATTATAAGACGTAATGCT 57.791 30.769 0.00 0.00 0.00 3.79
4023 5608 8.122330 TGAGCAAAATTATAAGACGTAATGCTG 58.878 33.333 0.00 0.00 0.00 4.41
4024 5609 8.208718 AGCAAAATTATAAGACGTAATGCTGA 57.791 30.769 0.00 0.00 0.00 4.26
4025 5610 8.840321 AGCAAAATTATAAGACGTAATGCTGAT 58.160 29.630 0.00 0.00 0.00 2.90
4026 5611 9.107367 GCAAAATTATAAGACGTAATGCTGATC 57.893 33.333 0.00 0.00 0.00 2.92
4027 5612 9.599322 CAAAATTATAAGACGTAATGCTGATCC 57.401 33.333 0.00 0.00 0.00 3.36
4028 5613 7.582435 AATTATAAGACGTAATGCTGATCCG 57.418 36.000 0.00 0.00 0.00 4.18
4029 5614 4.848562 ATAAGACGTAATGCTGATCCGA 57.151 40.909 0.00 0.00 0.00 4.55
4030 5615 2.493713 AGACGTAATGCTGATCCGAC 57.506 50.000 0.00 0.00 0.00 4.79
4031 5616 2.025155 AGACGTAATGCTGATCCGACT 58.975 47.619 0.00 0.00 0.00 4.18
4032 5617 3.211865 AGACGTAATGCTGATCCGACTA 58.788 45.455 0.00 0.00 0.00 2.59
4033 5618 3.821600 AGACGTAATGCTGATCCGACTAT 59.178 43.478 0.00 0.00 0.00 2.12
4034 5619 3.902150 ACGTAATGCTGATCCGACTATG 58.098 45.455 0.00 0.00 0.00 2.23
4035 5620 3.318275 ACGTAATGCTGATCCGACTATGT 59.682 43.478 0.00 0.00 0.00 2.29
4036 5621 4.517832 ACGTAATGCTGATCCGACTATGTA 59.482 41.667 0.00 0.00 0.00 2.29
4037 5622 4.852104 CGTAATGCTGATCCGACTATGTAC 59.148 45.833 0.00 0.00 0.00 2.90
4038 5623 4.937201 AATGCTGATCCGACTATGTACA 57.063 40.909 0.00 0.00 0.00 2.90
4039 5624 5.474578 AATGCTGATCCGACTATGTACAT 57.525 39.130 13.93 13.93 0.00 2.29
4040 5625 6.590234 AATGCTGATCCGACTATGTACATA 57.410 37.500 14.75 14.75 0.00 2.29
4041 5626 6.590234 ATGCTGATCCGACTATGTACATAA 57.410 37.500 16.17 2.08 0.00 1.90
4042 5627 6.590234 TGCTGATCCGACTATGTACATAAT 57.410 37.500 16.17 6.79 0.00 1.28
4043 5628 6.389906 TGCTGATCCGACTATGTACATAATG 58.610 40.000 16.17 8.53 0.00 1.90
4044 5629 5.289675 GCTGATCCGACTATGTACATAATGC 59.710 44.000 16.17 7.83 0.00 3.56
4045 5630 5.720202 TGATCCGACTATGTACATAATGCC 58.280 41.667 16.17 5.50 0.00 4.40
4046 5631 4.530710 TCCGACTATGTACATAATGCCC 57.469 45.455 16.17 3.98 0.00 5.36
4047 5632 3.898741 TCCGACTATGTACATAATGCCCA 59.101 43.478 16.17 0.00 0.00 5.36
4048 5633 4.021456 TCCGACTATGTACATAATGCCCAG 60.021 45.833 16.17 7.41 0.00 4.45
4049 5634 4.262463 CCGACTATGTACATAATGCCCAGT 60.262 45.833 16.17 10.47 0.00 4.00
4050 5635 4.686091 CGACTATGTACATAATGCCCAGTG 59.314 45.833 16.17 4.56 0.00 3.66
4051 5636 5.611374 GACTATGTACATAATGCCCAGTGT 58.389 41.667 16.17 7.53 0.00 3.55
4052 5637 6.001449 ACTATGTACATAATGCCCAGTGTT 57.999 37.500 16.17 0.00 0.00 3.32
4053 5638 6.423182 ACTATGTACATAATGCCCAGTGTTT 58.577 36.000 16.17 0.00 0.00 2.83
4054 5639 5.835113 ATGTACATAATGCCCAGTGTTTC 57.165 39.130 6.56 0.00 0.00 2.78
4055 5640 4.917385 TGTACATAATGCCCAGTGTTTCT 58.083 39.130 0.00 0.00 0.00 2.52
4056 5641 6.056090 TGTACATAATGCCCAGTGTTTCTA 57.944 37.500 0.00 0.00 0.00 2.10
4057 5642 6.658849 TGTACATAATGCCCAGTGTTTCTAT 58.341 36.000 0.00 0.00 0.00 1.98
4058 5643 7.116075 TGTACATAATGCCCAGTGTTTCTATT 58.884 34.615 0.00 0.00 0.00 1.73
4059 5644 7.613801 TGTACATAATGCCCAGTGTTTCTATTT 59.386 33.333 0.00 0.00 0.00 1.40
4060 5645 7.100458 ACATAATGCCCAGTGTTTCTATTTC 57.900 36.000 0.00 0.00 0.00 2.17
4061 5646 6.891908 ACATAATGCCCAGTGTTTCTATTTCT 59.108 34.615 0.00 0.00 0.00 2.52
4062 5647 5.649782 AATGCCCAGTGTTTCTATTTCTG 57.350 39.130 0.00 0.00 0.00 3.02
4063 5648 2.819608 TGCCCAGTGTTTCTATTTCTGC 59.180 45.455 0.00 0.00 0.00 4.26
4064 5649 3.084786 GCCCAGTGTTTCTATTTCTGCT 58.915 45.455 0.00 0.00 0.00 4.24
4065 5650 3.119708 GCCCAGTGTTTCTATTTCTGCTG 60.120 47.826 0.00 0.00 0.00 4.41
4066 5651 3.119708 CCCAGTGTTTCTATTTCTGCTGC 60.120 47.826 0.00 0.00 0.00 5.25
4067 5652 3.755378 CCAGTGTTTCTATTTCTGCTGCT 59.245 43.478 0.00 0.00 0.00 4.24
4068 5653 4.142730 CCAGTGTTTCTATTTCTGCTGCTC 60.143 45.833 0.00 0.00 0.00 4.26
4069 5654 4.694509 CAGTGTTTCTATTTCTGCTGCTCT 59.305 41.667 0.00 0.00 0.00 4.09
4070 5655 5.871524 CAGTGTTTCTATTTCTGCTGCTCTA 59.128 40.000 0.00 0.00 0.00 2.43
4071 5656 6.538021 CAGTGTTTCTATTTCTGCTGCTCTAT 59.462 38.462 0.00 0.00 0.00 1.98
4072 5657 6.538021 AGTGTTTCTATTTCTGCTGCTCTATG 59.462 38.462 0.00 0.00 0.00 2.23
4073 5658 5.819379 TGTTTCTATTTCTGCTGCTCTATGG 59.181 40.000 0.00 0.00 0.00 2.74
4074 5659 5.876651 TTCTATTTCTGCTGCTCTATGGA 57.123 39.130 0.00 0.00 0.00 3.41
4075 5660 5.207110 TCTATTTCTGCTGCTCTATGGAC 57.793 43.478 0.00 0.00 0.00 4.02
4090 5675 5.419542 TCTATGGACATCTTTGTAGTGTGC 58.580 41.667 0.00 0.00 35.79 4.57
4137 5722 2.492088 GACACCTAACAAAATCCCCAGC 59.508 50.000 0.00 0.00 0.00 4.85
4145 5730 2.009774 CAAAATCCCCAGCGTGTCTAG 58.990 52.381 0.00 0.00 0.00 2.43
4146 5731 1.276622 AAATCCCCAGCGTGTCTAGT 58.723 50.000 0.00 0.00 0.00 2.57
4147 5732 1.276622 AATCCCCAGCGTGTCTAGTT 58.723 50.000 0.00 0.00 0.00 2.24
4148 5733 0.824759 ATCCCCAGCGTGTCTAGTTC 59.175 55.000 0.00 0.00 0.00 3.01
4149 5734 0.251653 TCCCCAGCGTGTCTAGTTCT 60.252 55.000 0.00 0.00 0.00 3.01
4150 5735 0.108615 CCCCAGCGTGTCTAGTTCTG 60.109 60.000 0.00 0.00 0.00 3.02
4151 5736 0.737715 CCCAGCGTGTCTAGTTCTGC 60.738 60.000 0.00 0.00 0.00 4.26
4152 5737 0.244994 CCAGCGTGTCTAGTTCTGCT 59.755 55.000 0.00 0.00 0.00 4.24
4153 5738 1.344458 CAGCGTGTCTAGTTCTGCTG 58.656 55.000 12.71 12.71 43.08 4.41
4154 5739 0.389166 AGCGTGTCTAGTTCTGCTGC 60.389 55.000 0.00 0.00 0.00 5.25
4155 5740 0.389166 GCGTGTCTAGTTCTGCTGCT 60.389 55.000 0.00 0.00 0.00 4.24
4156 5741 1.623359 CGTGTCTAGTTCTGCTGCTC 58.377 55.000 0.00 0.00 0.00 4.26
4157 5742 1.201181 CGTGTCTAGTTCTGCTGCTCT 59.799 52.381 0.00 0.00 0.00 4.09
4158 5743 2.352225 CGTGTCTAGTTCTGCTGCTCTT 60.352 50.000 0.00 0.00 0.00 2.85
4159 5744 3.658709 GTGTCTAGTTCTGCTGCTCTTT 58.341 45.455 0.00 0.00 0.00 2.52
4160 5745 3.431572 GTGTCTAGTTCTGCTGCTCTTTG 59.568 47.826 0.00 0.00 0.00 2.77
4161 5746 2.999355 GTCTAGTTCTGCTGCTCTTTGG 59.001 50.000 0.00 0.00 0.00 3.28
4162 5747 2.634940 TCTAGTTCTGCTGCTCTTTGGT 59.365 45.455 0.00 0.00 0.00 3.67
4163 5748 3.832490 TCTAGTTCTGCTGCTCTTTGGTA 59.168 43.478 0.00 0.00 0.00 3.25
4164 5749 3.492102 AGTTCTGCTGCTCTTTGGTAA 57.508 42.857 0.00 0.00 0.00 2.85
4165 5750 3.820557 AGTTCTGCTGCTCTTTGGTAAA 58.179 40.909 0.00 0.00 0.00 2.01
4166 5751 4.401925 AGTTCTGCTGCTCTTTGGTAAAT 58.598 39.130 0.00 0.00 0.00 1.40
4194 5779 7.878477 AACAATGTTCAGCTTTGTATTGATG 57.122 32.000 14.13 0.00 42.36 3.07
4201 5786 5.128205 TCAGCTTTGTATTGATGATCCCTG 58.872 41.667 0.00 0.00 0.00 4.45
4204 5789 4.883585 GCTTTGTATTGATGATCCCTGTCA 59.116 41.667 0.00 0.00 0.00 3.58
4207 5792 7.229306 GCTTTGTATTGATGATCCCTGTCATAA 59.771 37.037 0.00 0.00 38.88 1.90
4209 5794 9.645128 TTTGTATTGATGATCCCTGTCATAAAT 57.355 29.630 5.17 5.17 40.89 1.40
4226 5811 7.039363 TGTCATAAATACTTGTTTCAAAGGGGG 60.039 37.037 0.00 0.00 0.00 5.40
4227 5812 7.013834 TCATAAATACTTGTTTCAAAGGGGGT 58.986 34.615 0.00 0.00 0.00 4.95
4228 5813 8.171400 TCATAAATACTTGTTTCAAAGGGGGTA 58.829 33.333 0.00 0.00 0.00 3.69
4229 5814 6.911250 AAATACTTGTTTCAAAGGGGGTAG 57.089 37.500 0.00 0.00 0.00 3.18
4234 5819 3.600433 TGTTTCAAAGGGGGTAGGTCTA 58.400 45.455 0.00 0.00 0.00 2.59
4296 5882 7.013369 CCCCCTTAATTACTGCTGATTTCTTAC 59.987 40.741 0.00 0.00 0.00 2.34
4299 5885 8.543774 CCTTAATTACTGCTGATTTCTTACTCG 58.456 37.037 0.00 0.00 0.00 4.18
4325 5911 6.595326 TGATTGGAAGTATGCAGAACTGTAAG 59.405 38.462 5.33 0.00 42.29 2.34
4443 6110 6.682746 TGAAACAGCTAGTACTGAAGAGAAG 58.317 40.000 5.39 0.00 40.25 2.85
4596 6263 5.297569 ACTTATCCTTATGGTCTGCCTTC 57.702 43.478 0.00 0.00 35.27 3.46
4849 6785 7.148457 GCTTGTTGAGGTTAGGTATACAGTTTC 60.148 40.741 5.01 0.00 0.00 2.78
5080 7234 9.716507 CTTTTGCACACATACCTAAATACATAC 57.283 33.333 0.00 0.00 0.00 2.39
5082 7236 8.657074 TTGCACACATACCTAAATACATACTC 57.343 34.615 0.00 0.00 0.00 2.59
5084 7238 6.649557 GCACACATACCTAAATACATACTCCC 59.350 42.308 0.00 0.00 0.00 4.30
5086 7240 8.088981 CACACATACCTAAATACATACTCCCTC 58.911 40.741 0.00 0.00 0.00 4.30
5087 7241 7.234988 ACACATACCTAAATACATACTCCCTCC 59.765 40.741 0.00 0.00 0.00 4.30
5088 7242 6.436532 ACATACCTAAATACATACTCCCTCCG 59.563 42.308 0.00 0.00 0.00 4.63
5089 7243 4.812653 ACCTAAATACATACTCCCTCCGT 58.187 43.478 0.00 0.00 0.00 4.69
5090 7244 5.214293 ACCTAAATACATACTCCCTCCGTT 58.786 41.667 0.00 0.00 0.00 4.44
5091 7245 5.303845 ACCTAAATACATACTCCCTCCGTTC 59.696 44.000 0.00 0.00 0.00 3.95
5092 7246 4.684484 AAATACATACTCCCTCCGTTCC 57.316 45.455 0.00 0.00 0.00 3.62
5093 7247 3.614568 ATACATACTCCCTCCGTTCCT 57.385 47.619 0.00 0.00 0.00 3.36
5094 7248 4.736611 ATACATACTCCCTCCGTTCCTA 57.263 45.455 0.00 0.00 0.00 2.94
5095 7249 3.393426 ACATACTCCCTCCGTTCCTAA 57.607 47.619 0.00 0.00 0.00 2.69
5096 7250 3.716431 ACATACTCCCTCCGTTCCTAAA 58.284 45.455 0.00 0.00 0.00 1.85
5097 7251 4.296056 ACATACTCCCTCCGTTCCTAAAT 58.704 43.478 0.00 0.00 0.00 1.40
5098 7252 5.461327 ACATACTCCCTCCGTTCCTAAATA 58.539 41.667 0.00 0.00 0.00 1.40
5099 7253 6.082707 ACATACTCCCTCCGTTCCTAAATAT 58.917 40.000 0.00 0.00 0.00 1.28
5100 7254 6.557633 ACATACTCCCTCCGTTCCTAAATATT 59.442 38.462 0.00 0.00 0.00 1.28
5101 7255 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
5102 7256 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
5103 7257 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
5104 7258 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
5105 7259 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
5108 7262 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
5109 7263 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
5111 7265 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
5112 7266 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
5123 7277 8.627208 ATTTGTCTTTCTAGAGATTTTCAGCA 57.373 30.769 0.00 0.00 0.00 4.41
5124 7278 8.450578 TTTGTCTTTCTAGAGATTTTCAGCAA 57.549 30.769 0.00 0.00 0.00 3.91
5125 7279 7.664082 TGTCTTTCTAGAGATTTTCAGCAAG 57.336 36.000 0.00 0.00 0.00 4.01
5126 7280 7.220030 TGTCTTTCTAGAGATTTTCAGCAAGT 58.780 34.615 0.00 0.00 0.00 3.16
5127 7281 7.172190 TGTCTTTCTAGAGATTTTCAGCAAGTG 59.828 37.037 0.00 0.00 0.00 3.16
5128 7282 7.386299 GTCTTTCTAGAGATTTTCAGCAAGTGA 59.614 37.037 0.00 0.00 0.00 3.41
5130 7284 6.352016 TCTAGAGATTTTCAGCAAGTGACT 57.648 37.500 0.00 0.00 33.71 3.41
5131 7285 7.468141 TCTAGAGATTTTCAGCAAGTGACTA 57.532 36.000 0.00 0.00 33.71 2.59
5132 7286 7.316640 TCTAGAGATTTTCAGCAAGTGACTAC 58.683 38.462 0.00 0.00 33.71 2.73
5134 7288 6.471146 AGAGATTTTCAGCAAGTGACTACAT 58.529 36.000 0.00 0.00 33.71 2.29
5136 7290 7.547370 AGAGATTTTCAGCAAGTGACTACATAC 59.453 37.037 0.00 0.00 33.71 2.39
5138 7292 3.503827 TCAGCAAGTGACTACATACGG 57.496 47.619 0.00 0.00 0.00 4.02
5140 7294 3.128764 TCAGCAAGTGACTACATACGGAG 59.871 47.826 0.00 0.00 0.00 4.63
5142 7296 2.416836 GCAAGTGACTACATACGGAGCA 60.417 50.000 0.00 0.00 0.00 4.26
5143 7297 3.845178 CAAGTGACTACATACGGAGCAA 58.155 45.455 0.00 0.00 0.00 3.91
5145 7299 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
5147 7301 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
5148 7302 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
5149 7303 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
5152 7306 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
5153 7307 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
5154 7308 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
5155 7309 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
5158 7312 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
5160 7314 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
5195 7349 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
5197 7351 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
5198 7352 6.770746 ATATACATCCGTATGTGGTAGTCC 57.229 41.667 3.56 0.00 45.99 3.85
5200 7354 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
5201 7355 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
5203 7357 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
5205 7359 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
5206 7360 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
5208 7362 6.764085 CCGTATGTGGTAGTCCATTTGAAATA 59.236 38.462 0.00 0.00 46.20 1.40
5209 7363 7.444183 CCGTATGTGGTAGTCCATTTGAAATAT 59.556 37.037 0.00 0.00 46.20 1.28
5210 7364 8.495949 CGTATGTGGTAGTCCATTTGAAATATC 58.504 37.037 0.00 0.00 46.20 1.63
5211 7365 9.561069 GTATGTGGTAGTCCATTTGAAATATCT 57.439 33.333 0.00 0.00 46.20 1.98
5214 7368 9.967451 TGTGGTAGTCCATTTGAAATATCTAAA 57.033 29.630 0.00 0.00 46.20 1.85
5234 7388 9.855021 ATCTAAAAGACAAATATTTGGAAACGG 57.145 29.630 27.43 14.00 42.34 4.44
5235 7389 9.069082 TCTAAAAGACAAATATTTGGAAACGGA 57.931 29.630 27.43 15.61 42.34 4.69
5236 7390 9.341899 CTAAAAGACAAATATTTGGAAACGGAG 57.658 33.333 27.43 14.39 42.34 4.63
5237 7391 5.897377 AGACAAATATTTGGAAACGGAGG 57.103 39.130 27.43 3.68 42.34 4.30
5238 7392 4.705023 AGACAAATATTTGGAAACGGAGGG 59.295 41.667 27.43 3.22 42.34 4.30
5239 7393 4.668636 ACAAATATTTGGAAACGGAGGGA 58.331 39.130 27.43 0.00 42.34 4.20
5240 7394 4.705023 ACAAATATTTGGAAACGGAGGGAG 59.295 41.667 27.43 2.64 42.34 4.30
5241 7395 4.586306 AATATTTGGAAACGGAGGGAGT 57.414 40.909 0.00 0.00 0.00 3.85
5242 7396 5.703730 AATATTTGGAAACGGAGGGAGTA 57.296 39.130 0.00 0.00 0.00 2.59
5496 7650 3.213206 TCCACTCATCCATATGGTTGC 57.787 47.619 22.99 0.00 35.42 4.17
5516 7670 2.612221 GCCGGGTTATACAGGTATGCTC 60.612 54.545 2.18 0.00 0.00 4.26
5534 7696 2.609459 GCTCATACTGCATAACACGCTT 59.391 45.455 0.00 0.00 0.00 4.68
5538 7708 5.656480 TCATACTGCATAACACGCTTCTTA 58.344 37.500 0.00 0.00 0.00 2.10
5823 8402 4.557296 GCGGTGTAATGTAGTCGGCTATTA 60.557 45.833 0.00 0.00 0.00 0.98
5912 8491 8.273605 TGTTAGTTTTCCTTTTGTACTCCCTTA 58.726 33.333 0.00 0.00 0.00 2.69
5940 8519 9.841295 TTTCTTTTTACTCCGCATATTAGGTAT 57.159 29.630 0.00 0.00 0.00 2.73
5950 8529 8.862325 TCCGCATATTAGGTATCAAATTCATT 57.138 30.769 0.00 0.00 0.00 2.57
6030 8610 9.457436 CCATGATGATCTAATGATATTGGTTCA 57.543 33.333 0.00 0.00 32.19 3.18
6227 9157 4.252073 CTGCACTGATCTTTCTGCTTACT 58.748 43.478 0.00 0.00 0.00 2.24
6272 9220 5.972107 AACAAGTGGATCTGGATCTTTTG 57.028 39.130 9.96 12.58 37.92 2.44
6273 9221 4.990526 ACAAGTGGATCTGGATCTTTTGT 58.009 39.130 9.96 13.05 37.92 2.83
6274 9222 4.763793 ACAAGTGGATCTGGATCTTTTGTG 59.236 41.667 17.58 10.65 35.95 3.33
6275 9223 3.960571 AGTGGATCTGGATCTTTTGTGG 58.039 45.455 9.96 0.00 37.92 4.17
6276 9224 3.588842 AGTGGATCTGGATCTTTTGTGGA 59.411 43.478 9.96 0.00 37.92 4.02
6277 9225 3.691609 GTGGATCTGGATCTTTTGTGGAC 59.308 47.826 9.96 0.00 37.92 4.02
6278 9226 3.588842 TGGATCTGGATCTTTTGTGGACT 59.411 43.478 9.96 0.00 37.92 3.85
6281 9229 5.124617 GGATCTGGATCTTTTGTGGACTTTC 59.875 44.000 9.96 0.00 37.92 2.62
6282 9230 4.398319 TCTGGATCTTTTGTGGACTTTCC 58.602 43.478 0.00 0.00 36.96 3.13
6283 9231 4.104738 TCTGGATCTTTTGTGGACTTTCCT 59.895 41.667 0.00 0.00 37.46 3.36
6284 9232 4.144297 TGGATCTTTTGTGGACTTTCCTG 58.856 43.478 0.00 0.00 37.46 3.86
6547 9509 1.418334 ATCCTGTAGAGCGGCAGATT 58.582 50.000 1.45 0.00 34.87 2.40
6677 9699 4.331108 TGTTAACCTTGCTGCATATGTCA 58.669 39.130 1.84 2.32 0.00 3.58
6770 9792 4.022068 CAGCAGAGAGAGATGATCCTTACC 60.022 50.000 0.00 0.00 0.00 2.85
6794 9816 0.550914 TCAAAGCCCACCTGAACACT 59.449 50.000 0.00 0.00 0.00 3.55
6797 9819 0.398318 AAGCCCACCTGAACACTCTC 59.602 55.000 0.00 0.00 0.00 3.20
6878 9900 7.702348 GCTGGAGGTATGTTTTGTCATAAATTC 59.298 37.037 0.00 0.00 33.01 2.17
6880 9902 9.967451 TGGAGGTATGTTTTGTCATAAATTCTA 57.033 29.630 0.00 0.00 33.01 2.10
7251 10732 8.368668 ACTGTACAAATTTAGCACTAGAGAAGT 58.631 33.333 0.00 0.00 39.81 3.01
7289 10778 3.430895 GCTGTCGGAAAAATGTCGAGTTA 59.569 43.478 0.00 0.00 33.41 2.24
7316 10805 3.495193 CGCTGCGACTACTTTGTTAGTA 58.505 45.455 18.66 0.00 38.33 1.82
7323 10812 5.005490 GCGACTACTTTGTTAGTAATCCTGC 59.995 44.000 0.00 0.00 38.84 4.85
7375 10882 1.337703 TGATGGCTTGCTGTTGTTGTC 59.662 47.619 0.00 0.00 0.00 3.18
7376 10883 0.311790 ATGGCTTGCTGTTGTTGTCG 59.688 50.000 0.00 0.00 0.00 4.35
7377 10884 1.029408 TGGCTTGCTGTTGTTGTCGT 61.029 50.000 0.00 0.00 0.00 4.34
7638 11165 5.277345 GCTGTAATGCTAGTTTTATCACCGG 60.277 44.000 0.00 0.00 0.00 5.28
7649 11176 6.962686 AGTTTTATCACCGGTAAAGTTTGAC 58.037 36.000 6.87 0.00 0.00 3.18
7728 11255 5.358298 AAGTTTGGTCGTAGCTCAAATTC 57.642 39.130 0.00 0.00 33.57 2.17
7954 11484 8.604640 TGTGTAATTCAAATTTGCACATCAAT 57.395 26.923 18.67 8.83 37.73 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 3.440173 GGTCAAAAGCGATCCTTCATGAA 59.560 43.478 8.12 8.12 33.65 2.57
93 97 0.941542 CCATAAATGGGCGTACGTGG 59.058 55.000 17.90 9.91 44.31 4.94
111 115 5.452078 TTGAGAAAATGGTTGTCATGTCC 57.548 39.130 0.00 0.00 35.99 4.02
150 154 2.297033 AGGCAAGTCGTAAAACGGAGTA 59.703 45.455 0.00 0.00 45.00 2.59
160 164 4.501071 GTCTCCAAAATAGGCAAGTCGTA 58.499 43.478 0.00 0.00 0.00 3.43
176 180 5.595133 ACGGTATTTTTCTTTTTGGTCTCCA 59.405 36.000 0.00 0.00 0.00 3.86
178 182 9.177304 CTTTACGGTATTTTTCTTTTTGGTCTC 57.823 33.333 0.00 0.00 0.00 3.36
208 212 2.697431 TGTTGAACTTGCAATACCGC 57.303 45.000 0.00 0.00 0.00 5.68
239 243 7.795482 TCTTTTTACGAATGTGAGAAGGAAA 57.205 32.000 0.00 0.00 29.83 3.13
241 245 7.795482 TTTCTTTTTACGAATGTGAGAAGGA 57.205 32.000 0.00 0.00 29.83 3.36
244 248 9.878599 GAGATTTTCTTTTTACGAATGTGAGAA 57.121 29.630 0.00 0.00 0.00 2.87
246 250 9.322776 CAGAGATTTTCTTTTTACGAATGTGAG 57.677 33.333 0.00 0.00 32.41 3.51
247 251 8.289618 CCAGAGATTTTCTTTTTACGAATGTGA 58.710 33.333 0.00 0.00 32.41 3.58
248 252 7.061094 GCCAGAGATTTTCTTTTTACGAATGTG 59.939 37.037 0.00 0.00 32.41 3.21
249 253 7.084486 GCCAGAGATTTTCTTTTTACGAATGT 58.916 34.615 0.00 0.00 32.41 2.71
250 254 7.083858 TGCCAGAGATTTTCTTTTTACGAATG 58.916 34.615 0.00 0.00 32.41 2.67
252 256 6.627395 TGCCAGAGATTTTCTTTTTACGAA 57.373 33.333 0.00 0.00 32.41 3.85
253 257 5.334879 GCTGCCAGAGATTTTCTTTTTACGA 60.335 40.000 0.00 0.00 32.41 3.43
254 258 4.853743 GCTGCCAGAGATTTTCTTTTTACG 59.146 41.667 0.00 0.00 32.41 3.18
255 259 5.164233 GGCTGCCAGAGATTTTCTTTTTAC 58.836 41.667 15.17 0.00 32.41 2.01
256 260 4.832266 TGGCTGCCAGAGATTTTCTTTTTA 59.168 37.500 19.30 0.00 32.41 1.52
257 261 3.642848 TGGCTGCCAGAGATTTTCTTTTT 59.357 39.130 19.30 0.00 32.41 1.94
258 262 3.233507 TGGCTGCCAGAGATTTTCTTTT 58.766 40.909 19.30 0.00 32.41 2.27
259 263 2.880443 TGGCTGCCAGAGATTTTCTTT 58.120 42.857 19.30 0.00 32.41 2.52
349 355 4.620184 GCAATGTGATCTTTTTGTCAGAGC 59.380 41.667 0.00 0.00 0.00 4.09
401 407 4.063689 CAAGCTTCTTTTCTCAGCTCTCA 58.936 43.478 0.00 0.00 43.28 3.27
408 414 5.296151 TCCTCTTCAAGCTTCTTTTCTCA 57.704 39.130 0.00 0.00 0.00 3.27
436 442 0.032615 TGGGTTTTTGCAGGTCAGGT 60.033 50.000 0.00 0.00 0.00 4.00
437 443 1.118838 TTGGGTTTTTGCAGGTCAGG 58.881 50.000 0.00 0.00 0.00 3.86
438 444 1.535860 CGTTGGGTTTTTGCAGGTCAG 60.536 52.381 0.00 0.00 0.00 3.51
439 445 0.457851 CGTTGGGTTTTTGCAGGTCA 59.542 50.000 0.00 0.00 0.00 4.02
440 446 0.741915 TCGTTGGGTTTTTGCAGGTC 59.258 50.000 0.00 0.00 0.00 3.85
441 447 0.744281 CTCGTTGGGTTTTTGCAGGT 59.256 50.000 0.00 0.00 0.00 4.00
442 448 0.744281 ACTCGTTGGGTTTTTGCAGG 59.256 50.000 0.00 0.00 0.00 4.85
443 449 2.577449 AACTCGTTGGGTTTTTGCAG 57.423 45.000 0.00 0.00 0.00 4.41
444 450 2.417515 GGAAACTCGTTGGGTTTTTGCA 60.418 45.455 0.00 0.00 37.07 4.08
445 451 2.198406 GGAAACTCGTTGGGTTTTTGC 58.802 47.619 0.00 0.00 37.07 3.68
446 452 3.512033 TGGAAACTCGTTGGGTTTTTG 57.488 42.857 0.00 0.00 37.07 2.44
447 453 4.746535 AATGGAAACTCGTTGGGTTTTT 57.253 36.364 0.00 0.00 37.07 1.94
448 454 4.442332 GGAAATGGAAACTCGTTGGGTTTT 60.442 41.667 0.00 0.00 37.07 2.43
449 455 3.069016 GGAAATGGAAACTCGTTGGGTTT 59.931 43.478 0.00 0.00 39.25 3.27
450 456 2.626266 GGAAATGGAAACTCGTTGGGTT 59.374 45.455 0.00 0.00 0.00 4.11
672 727 2.024464 CCCCCTTTCTCTCTCTCTCTCA 60.024 54.545 0.00 0.00 0.00 3.27
910 968 3.685139 AGAGAAACAAGATCTCCGCAA 57.315 42.857 0.00 0.00 43.52 4.85
927 985 3.181514 ACACCAAACGAACAAACGAAGAG 60.182 43.478 0.00 0.00 37.03 2.85
928 986 2.743126 ACACCAAACGAACAAACGAAGA 59.257 40.909 0.00 0.00 37.03 2.87
929 987 2.843643 CACACCAAACGAACAAACGAAG 59.156 45.455 0.00 0.00 37.03 3.79
940 998 3.959975 CCGCCACCACACCAAACG 61.960 66.667 0.00 0.00 0.00 3.60
955 1013 2.629656 CCAGCAAGAAACAGCCCCG 61.630 63.158 0.00 0.00 0.00 5.73
1398 1670 1.524849 GAAGATGCCGGAGAAGCCC 60.525 63.158 5.05 0.00 0.00 5.19
1438 1715 5.971202 TGAAAAACGAGATCTTTGTTTGCTC 59.029 36.000 20.94 19.47 41.54 4.26
1618 1906 3.259425 CTGCAAGGCGTGAACTGGC 62.259 63.158 4.11 0.00 35.42 4.85
1652 1940 5.173312 CGCACTATTCAGTTAACCGTATGAG 59.827 44.000 0.88 0.00 30.46 2.90
1707 1999 2.031769 TCGACAAATCAAACAGCTGCAG 60.032 45.455 15.27 10.11 0.00 4.41
1724 2016 1.153086 ATGCCTCCAGCCAATCGAC 60.153 57.895 0.00 0.00 42.71 4.20
1733 2025 0.252479 ACTGAGAAGCATGCCTCCAG 59.748 55.000 22.73 22.73 0.00 3.86
1782 2083 2.484417 CCCTGCAAGCTATGAGTACAGG 60.484 54.545 0.00 0.00 42.28 4.00
1869 2299 1.463674 AACCCATCCAAGCGAATGTC 58.536 50.000 0.00 0.00 0.00 3.06
1870 2300 2.799126 TAACCCATCCAAGCGAATGT 57.201 45.000 0.00 0.00 0.00 2.71
1875 2305 3.945285 AGTTACAATAACCCATCCAAGCG 59.055 43.478 0.00 0.00 0.00 4.68
1912 2342 8.919145 CAGAGAGGTTAATCAGGAACTATTACT 58.081 37.037 0.00 0.00 36.02 2.24
1913 2343 8.915036 TCAGAGAGGTTAATCAGGAACTATTAC 58.085 37.037 0.00 0.00 36.02 1.89
1914 2344 9.488762 TTCAGAGAGGTTAATCAGGAACTATTA 57.511 33.333 0.00 0.00 36.02 0.98
1916 2346 7.979786 TTCAGAGAGGTTAATCAGGAACTAT 57.020 36.000 0.00 0.00 36.02 2.12
1958 2428 7.545362 ACAATGTGAAGCACTAGACAATATC 57.455 36.000 0.00 0.00 35.11 1.63
1979 2449 8.629158 ACAAACAGCTTCATATAAGTGAAACAA 58.371 29.630 0.00 0.00 41.43 2.83
1987 2457 6.183360 TGGATGCACAAACAGCTTCATATAAG 60.183 38.462 0.00 0.00 37.75 1.73
1990 2460 4.018490 TGGATGCACAAACAGCTTCATAT 58.982 39.130 0.00 0.00 37.75 1.78
1994 2464 2.602878 CATGGATGCACAAACAGCTTC 58.397 47.619 0.00 0.00 35.96 3.86
2019 2577 1.927895 CTGGTCACAGCGGATAAGAC 58.072 55.000 0.00 0.00 38.01 3.01
2030 2588 3.118408 AGAACAAGTACTTGCTGGTCACA 60.118 43.478 30.97 0.00 44.03 3.58
2031 2589 3.467803 AGAACAAGTACTTGCTGGTCAC 58.532 45.455 30.97 15.88 44.03 3.67
2032 2590 3.838244 AGAACAAGTACTTGCTGGTCA 57.162 42.857 30.97 0.00 44.03 4.02
2033 2591 3.680458 GCTAGAACAAGTACTTGCTGGTC 59.320 47.826 30.97 22.42 44.03 4.02
2035 2593 3.664107 TGCTAGAACAAGTACTTGCTGG 58.336 45.455 30.97 23.09 44.03 4.85
2036 2594 5.274881 CTTGCTAGAACAAGTACTTGCTG 57.725 43.478 30.97 18.38 44.03 4.41
2057 2618 9.651913 AACACAAATCACAAACTGAAATAAACT 57.348 25.926 0.00 0.00 30.60 2.66
2073 2634 3.235750 TGGTCCATCCAACACAAATCA 57.764 42.857 0.00 0.00 44.12 2.57
2116 2677 3.632145 TGGTGAAAGTTTGGAAGCTTCTC 59.368 43.478 25.05 15.71 0.00 2.87
2198 3129 6.142798 GTCACATTAGATTGTTTGCAGTTGTG 59.857 38.462 0.00 0.00 33.77 3.33
2224 3155 6.207417 TGAAGAGAAATAGAAGTGGCCAAAAG 59.793 38.462 7.24 0.00 0.00 2.27
2228 3159 4.287067 ACTGAAGAGAAATAGAAGTGGCCA 59.713 41.667 0.00 0.00 0.00 5.36
2265 3724 3.843893 TCAGATAAGCTGCCTTGCATA 57.156 42.857 0.00 0.00 44.52 3.14
2266 3725 2.723322 TCAGATAAGCTGCCTTGCAT 57.277 45.000 0.00 0.00 44.52 3.96
2404 3933 0.748367 TAGCTCCAGTCTCGCGATGT 60.748 55.000 10.36 0.00 0.00 3.06
2503 4032 2.696187 GAGTGAGGGTCCCAGAATAGAC 59.304 54.545 11.55 0.00 0.00 2.59
2548 4077 1.379977 TACCCTCCTCACCAGCTCG 60.380 63.158 0.00 0.00 0.00 5.03
2848 4389 1.005924 CCCTCAGGTGCCCTAAAATGT 59.994 52.381 0.00 0.00 29.64 2.71
2910 4460 5.237815 TGTCAGATGATGTGAAGTTACCAC 58.762 41.667 0.00 0.00 35.23 4.16
2940 4490 1.717032 AGCATAGCCGGATCCAACTA 58.283 50.000 13.41 12.58 0.00 2.24
3178 4740 6.386927 TCTGAGGACCAAGTAAATCCATGTAT 59.613 38.462 0.00 0.00 34.73 2.29
3394 4956 1.682740 TCCACGAACCAAAAGAACCC 58.317 50.000 0.00 0.00 0.00 4.11
3430 4992 4.648307 GGCATCAGATTTCCTTCCATCTTT 59.352 41.667 0.00 0.00 0.00 2.52
3442 5004 1.211457 AGAAGCGAGGGCATCAGATTT 59.789 47.619 0.00 0.00 43.41 2.17
3499 5061 2.191400 TGCCCAGCTATTTCAGAGAGT 58.809 47.619 0.00 0.00 0.00 3.24
3557 5119 9.883142 TGTTGTTATGTCATACTAATGATCACA 57.117 29.630 0.00 0.00 43.87 3.58
3560 5122 9.817365 GCATGTTGTTATGTCATACTAATGATC 57.183 33.333 0.00 0.00 43.87 2.92
3563 5125 9.786105 TTTGCATGTTGTTATGTCATACTAATG 57.214 29.630 0.00 0.00 0.00 1.90
3565 5127 9.008965 AGTTTGCATGTTGTTATGTCATACTAA 57.991 29.630 0.00 0.00 31.71 2.24
3566 5128 8.450180 CAGTTTGCATGTTGTTATGTCATACTA 58.550 33.333 0.00 0.00 31.95 1.82
3568 5130 7.083858 ACAGTTTGCATGTTGTTATGTCATAC 58.916 34.615 0.00 0.00 0.00 2.39
3572 5134 6.915300 TGTTACAGTTTGCATGTTGTTATGTC 59.085 34.615 0.00 0.00 32.02 3.06
3581 5143 1.673400 TGCGTGTTACAGTTTGCATGT 59.327 42.857 0.00 0.00 34.62 3.21
3586 5148 2.108700 GCACTTGCGTGTTACAGTTTG 58.891 47.619 0.00 0.00 43.16 2.93
3599 5178 4.393062 ACACTAACTGTATGATGCACTTGC 59.607 41.667 0.00 0.00 42.50 4.01
3604 5183 6.816640 GGAAGTAACACTAACTGTATGATGCA 59.183 38.462 0.00 0.00 30.51 3.96
3608 5187 8.874744 ACTAGGAAGTAACACTAACTGTATGA 57.125 34.615 0.00 0.00 32.84 2.15
3619 5198 6.094603 TCCGACTATTGACTAGGAAGTAACAC 59.905 42.308 0.00 0.00 35.56 3.32
3629 5208 7.209471 AGAAATAGCTCCGACTATTGACTAG 57.791 40.000 0.00 0.00 41.03 2.57
3636 5215 7.016268 TCCCATAAAAGAAATAGCTCCGACTAT 59.984 37.037 0.00 0.00 34.25 2.12
3642 5221 7.404671 TTGTTCCCATAAAAGAAATAGCTCC 57.595 36.000 0.00 0.00 0.00 4.70
3656 5235 0.334335 TGCCATGCCTTGTTCCCATA 59.666 50.000 0.00 0.00 0.00 2.74
3711 5290 5.402568 CCTCATTTTACACTCGATGTATCCG 59.597 44.000 8.03 0.00 43.46 4.18
3759 5338 4.331168 CACTAGGCTGTAGAAACAATCTGC 59.669 45.833 0.00 0.00 39.30 4.26
3787 5366 9.396022 TGCAGAAAAAGGGAGTATTCTTAATAG 57.604 33.333 0.00 0.00 30.01 1.73
3821 5400 5.044772 TGGGTATTTGGCCTAAAGATGTACA 60.045 40.000 3.32 0.00 0.00 2.90
3827 5406 4.043561 TCTGTTGGGTATTTGGCCTAAAGA 59.956 41.667 3.32 0.00 0.00 2.52
3828 5407 4.340617 TCTGTTGGGTATTTGGCCTAAAG 58.659 43.478 3.32 0.00 0.00 1.85
3829 5408 4.390129 TCTGTTGGGTATTTGGCCTAAA 57.610 40.909 3.32 3.33 0.00 1.85
3857 5438 4.156739 CAGAACAAGCAAAGGAGGATTACC 59.843 45.833 0.00 0.00 0.00 2.85
3858 5439 4.762251 ACAGAACAAGCAAAGGAGGATTAC 59.238 41.667 0.00 0.00 0.00 1.89
3893 5478 3.559655 GGAATGGCCAAAACACTTTTCAC 59.440 43.478 10.96 0.00 36.34 3.18
3927 5512 7.182749 AGGGGCATAGAAACATATTGCTAGATA 59.817 37.037 0.00 0.00 28.82 1.98
3941 5526 4.272489 CACATTTGAGAGGGGCATAGAAA 58.728 43.478 0.00 0.00 0.00 2.52
3949 5534 0.606401 ACGTGCACATTTGAGAGGGG 60.606 55.000 18.64 0.00 0.00 4.79
3972 5557 2.096406 GCAGTATGTGTGTGCGCG 59.904 61.111 0.00 0.00 39.31 6.86
3974 5559 0.585838 TTGTGCAGTATGTGTGTGCG 59.414 50.000 0.00 0.00 40.23 5.34
3994 5579 9.306280 CATTACGTCTTATAATTTTGCTCATCG 57.694 33.333 0.00 0.00 0.00 3.84
3997 5582 8.122330 CAGCATTACGTCTTATAATTTTGCTCA 58.878 33.333 0.00 0.00 0.00 4.26
4000 5585 9.107367 GATCAGCATTACGTCTTATAATTTTGC 57.893 33.333 0.00 0.00 0.00 3.68
4001 5586 9.599322 GGATCAGCATTACGTCTTATAATTTTG 57.401 33.333 0.00 0.00 0.00 2.44
4012 5597 2.493713 AGTCGGATCAGCATTACGTC 57.506 50.000 0.00 0.00 0.00 4.34
4015 5600 5.769367 TGTACATAGTCGGATCAGCATTAC 58.231 41.667 0.00 0.00 0.00 1.89
4017 5602 4.937201 TGTACATAGTCGGATCAGCATT 57.063 40.909 0.00 0.00 0.00 3.56
4018 5603 6.590234 TTATGTACATAGTCGGATCAGCAT 57.410 37.500 14.96 0.00 0.00 3.79
4019 5604 6.389906 CATTATGTACATAGTCGGATCAGCA 58.610 40.000 14.96 0.00 0.00 4.41
4020 5605 5.289675 GCATTATGTACATAGTCGGATCAGC 59.710 44.000 14.96 7.14 0.00 4.26
4021 5606 5.807520 GGCATTATGTACATAGTCGGATCAG 59.192 44.000 14.96 1.38 0.00 2.90
4022 5607 5.337250 GGGCATTATGTACATAGTCGGATCA 60.337 44.000 14.96 0.00 0.00 2.92
4023 5608 5.109903 GGGCATTATGTACATAGTCGGATC 58.890 45.833 14.96 4.10 0.00 3.36
4024 5609 4.530553 TGGGCATTATGTACATAGTCGGAT 59.469 41.667 14.96 3.73 0.00 4.18
4025 5610 3.898741 TGGGCATTATGTACATAGTCGGA 59.101 43.478 14.96 1.42 0.00 4.55
4026 5611 4.245660 CTGGGCATTATGTACATAGTCGG 58.754 47.826 14.96 7.89 0.00 4.79
4027 5612 4.686091 CACTGGGCATTATGTACATAGTCG 59.314 45.833 14.96 9.17 0.00 4.18
4028 5613 5.611374 ACACTGGGCATTATGTACATAGTC 58.389 41.667 14.96 6.89 0.00 2.59
4029 5614 5.630415 ACACTGGGCATTATGTACATAGT 57.370 39.130 14.96 10.15 0.00 2.12
4030 5615 6.767902 AGAAACACTGGGCATTATGTACATAG 59.232 38.462 14.96 6.81 0.00 2.23
4031 5616 6.658849 AGAAACACTGGGCATTATGTACATA 58.341 36.000 11.62 11.62 0.00 2.29
4032 5617 5.509498 AGAAACACTGGGCATTATGTACAT 58.491 37.500 13.93 13.93 0.00 2.29
4033 5618 4.917385 AGAAACACTGGGCATTATGTACA 58.083 39.130 0.00 0.00 0.00 2.90
4034 5619 7.568199 AATAGAAACACTGGGCATTATGTAC 57.432 36.000 0.00 0.00 0.00 2.90
4035 5620 8.052748 AGAAATAGAAACACTGGGCATTATGTA 58.947 33.333 0.00 0.00 0.00 2.29
4036 5621 6.891908 AGAAATAGAAACACTGGGCATTATGT 59.108 34.615 0.00 0.00 0.00 2.29
4037 5622 7.198390 CAGAAATAGAAACACTGGGCATTATG 58.802 38.462 0.00 0.00 0.00 1.90
4038 5623 6.183360 GCAGAAATAGAAACACTGGGCATTAT 60.183 38.462 0.00 0.00 0.00 1.28
4039 5624 5.125417 GCAGAAATAGAAACACTGGGCATTA 59.875 40.000 0.00 0.00 0.00 1.90
4040 5625 4.082026 GCAGAAATAGAAACACTGGGCATT 60.082 41.667 0.00 0.00 0.00 3.56
4041 5626 3.445096 GCAGAAATAGAAACACTGGGCAT 59.555 43.478 0.00 0.00 0.00 4.40
4042 5627 2.819608 GCAGAAATAGAAACACTGGGCA 59.180 45.455 0.00 0.00 0.00 5.36
4043 5628 3.084786 AGCAGAAATAGAAACACTGGGC 58.915 45.455 0.00 0.00 0.00 5.36
4044 5629 3.119708 GCAGCAGAAATAGAAACACTGGG 60.120 47.826 0.00 0.00 0.00 4.45
4045 5630 3.755378 AGCAGCAGAAATAGAAACACTGG 59.245 43.478 0.00 0.00 0.00 4.00
4046 5631 4.694509 AGAGCAGCAGAAATAGAAACACTG 59.305 41.667 0.00 0.00 0.00 3.66
4047 5632 4.904241 AGAGCAGCAGAAATAGAAACACT 58.096 39.130 0.00 0.00 0.00 3.55
4048 5633 6.238320 CCATAGAGCAGCAGAAATAGAAACAC 60.238 42.308 0.00 0.00 0.00 3.32
4049 5634 5.819379 CCATAGAGCAGCAGAAATAGAAACA 59.181 40.000 0.00 0.00 0.00 2.83
4050 5635 6.018343 GTCCATAGAGCAGCAGAAATAGAAAC 60.018 42.308 0.00 0.00 0.00 2.78
4051 5636 6.051717 GTCCATAGAGCAGCAGAAATAGAAA 58.948 40.000 0.00 0.00 0.00 2.52
4052 5637 5.129320 TGTCCATAGAGCAGCAGAAATAGAA 59.871 40.000 0.00 0.00 0.00 2.10
4053 5638 4.651045 TGTCCATAGAGCAGCAGAAATAGA 59.349 41.667 0.00 0.00 0.00 1.98
4054 5639 4.953667 TGTCCATAGAGCAGCAGAAATAG 58.046 43.478 0.00 0.00 0.00 1.73
4055 5640 5.306419 AGATGTCCATAGAGCAGCAGAAATA 59.694 40.000 0.00 0.00 0.00 1.40
4056 5641 3.920231 TGTCCATAGAGCAGCAGAAAT 57.080 42.857 0.00 0.00 0.00 2.17
4057 5642 3.453717 AGATGTCCATAGAGCAGCAGAAA 59.546 43.478 0.00 0.00 0.00 2.52
4058 5643 3.036819 AGATGTCCATAGAGCAGCAGAA 58.963 45.455 0.00 0.00 0.00 3.02
4059 5644 2.675583 AGATGTCCATAGAGCAGCAGA 58.324 47.619 0.00 0.00 0.00 4.26
4060 5645 3.472283 AAGATGTCCATAGAGCAGCAG 57.528 47.619 0.00 0.00 0.00 4.24
4061 5646 3.054875 ACAAAGATGTCCATAGAGCAGCA 60.055 43.478 0.00 0.00 33.41 4.41
4062 5647 3.539604 ACAAAGATGTCCATAGAGCAGC 58.460 45.455 0.00 0.00 33.41 5.25
4063 5648 5.752472 CACTACAAAGATGTCCATAGAGCAG 59.248 44.000 0.00 0.00 41.05 4.24
4064 5649 5.187772 ACACTACAAAGATGTCCATAGAGCA 59.812 40.000 0.00 0.00 41.05 4.26
4065 5650 5.521735 CACACTACAAAGATGTCCATAGAGC 59.478 44.000 0.00 0.00 41.05 4.09
4066 5651 5.521735 GCACACTACAAAGATGTCCATAGAG 59.478 44.000 0.00 0.00 41.05 2.43
4067 5652 5.046663 TGCACACTACAAAGATGTCCATAGA 60.047 40.000 0.00 0.00 41.05 1.98
4068 5653 5.178061 TGCACACTACAAAGATGTCCATAG 58.822 41.667 0.00 0.00 41.05 2.23
4069 5654 5.159273 TGCACACTACAAAGATGTCCATA 57.841 39.130 0.00 0.00 41.05 2.74
4070 5655 4.019792 TGCACACTACAAAGATGTCCAT 57.980 40.909 0.00 0.00 41.05 3.41
4071 5656 3.483808 TGCACACTACAAAGATGTCCA 57.516 42.857 0.00 0.00 41.05 4.02
4072 5657 3.563808 TGTTGCACACTACAAAGATGTCC 59.436 43.478 0.00 0.00 41.05 4.02
4073 5658 4.527564 GTGTTGCACACTACAAAGATGTC 58.472 43.478 10.87 0.00 45.27 3.06
4074 5659 3.002246 CGTGTTGCACACTACAAAGATGT 59.998 43.478 14.60 0.00 46.46 3.06
4075 5660 3.544651 CGTGTTGCACACTACAAAGATG 58.455 45.455 14.60 0.00 46.46 2.90
4090 5675 2.453080 GCATTATGTCCATGCGTGTTG 58.547 47.619 4.96 0.00 37.88 3.33
4102 5687 8.518430 TTGTTAGGTGTCATAATGCATTATGT 57.482 30.769 39.16 28.86 46.04 2.29
4137 5722 1.201181 AGAGCAGCAGAACTAGACACG 59.799 52.381 0.00 0.00 0.00 4.49
4145 5730 4.773323 ATTTACCAAAGAGCAGCAGAAC 57.227 40.909 0.00 0.00 0.00 3.01
4146 5731 5.789643 AAATTTACCAAAGAGCAGCAGAA 57.210 34.783 0.00 0.00 0.00 3.02
4147 5732 5.789643 AAAATTTACCAAAGAGCAGCAGA 57.210 34.783 0.00 0.00 0.00 4.26
4148 5733 6.922957 TGTTAAAATTTACCAAAGAGCAGCAG 59.077 34.615 0.00 0.00 0.00 4.24
4149 5734 6.810911 TGTTAAAATTTACCAAAGAGCAGCA 58.189 32.000 0.00 0.00 0.00 4.41
4150 5735 7.707774 TTGTTAAAATTTACCAAAGAGCAGC 57.292 32.000 0.00 0.00 0.00 5.25
4151 5736 9.260002 ACATTGTTAAAATTTACCAAAGAGCAG 57.740 29.630 5.50 0.00 0.00 4.24
4152 5737 9.606631 AACATTGTTAAAATTTACCAAAGAGCA 57.393 25.926 0.00 0.00 0.00 4.26
4156 5741 9.862585 GCTGAACATTGTTAAAATTTACCAAAG 57.137 29.630 1.15 0.00 0.00 2.77
4157 5742 9.606631 AGCTGAACATTGTTAAAATTTACCAAA 57.393 25.926 1.15 0.00 0.00 3.28
4158 5743 9.606631 AAGCTGAACATTGTTAAAATTTACCAA 57.393 25.926 1.15 0.00 0.00 3.67
4159 5744 9.606631 AAAGCTGAACATTGTTAAAATTTACCA 57.393 25.926 1.15 0.00 0.00 3.25
4160 5745 9.862585 CAAAGCTGAACATTGTTAAAATTTACC 57.137 29.630 1.15 0.00 0.00 2.85
4166 5751 9.809096 TCAATACAAAGCTGAACATTGTTAAAA 57.191 25.926 6.07 0.00 40.49 1.52
4194 5779 8.506168 TGAAACAAGTATTTATGACAGGGATC 57.494 34.615 0.00 0.00 0.00 3.36
4201 5786 7.039293 ACCCCCTTTGAAACAAGTATTTATGAC 60.039 37.037 0.00 0.00 0.00 3.06
4204 5789 7.618117 CCTACCCCCTTTGAAACAAGTATTTAT 59.382 37.037 0.00 0.00 0.00 1.40
4207 5792 5.162914 ACCTACCCCCTTTGAAACAAGTATT 60.163 40.000 0.00 0.00 0.00 1.89
4209 5794 3.723154 ACCTACCCCCTTTGAAACAAGTA 59.277 43.478 0.00 0.00 0.00 2.24
4210 5795 2.516702 ACCTACCCCCTTTGAAACAAGT 59.483 45.455 0.00 0.00 0.00 3.16
4213 5798 2.424793 AGACCTACCCCCTTTGAAACA 58.575 47.619 0.00 0.00 0.00 2.83
4226 5811 4.866682 GCAAACTGCAGAATAGACCTAC 57.133 45.455 23.35 0.00 44.26 3.18
4250 5835 1.574702 GCGGTACCCAGTGCAAAGTC 61.575 60.000 6.25 0.00 0.00 3.01
4296 5882 3.785486 TCTGCATACTTCCAATCACGAG 58.215 45.455 0.00 0.00 0.00 4.18
4299 5885 4.697352 ACAGTTCTGCATACTTCCAATCAC 59.303 41.667 0.00 0.00 0.00 3.06
5080 7234 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
5082 7236 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
5084 7238 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
5086 7240 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
5097 7251 9.725019 TGCTGAAAATCTCTAGAAAGACAAATA 57.275 29.630 0.00 0.00 0.00 1.40
5098 7252 8.627208 TGCTGAAAATCTCTAGAAAGACAAAT 57.373 30.769 0.00 0.00 0.00 2.32
5099 7253 8.450578 TTGCTGAAAATCTCTAGAAAGACAAA 57.549 30.769 0.00 0.00 0.00 2.83
5100 7254 7.716998 ACTTGCTGAAAATCTCTAGAAAGACAA 59.283 33.333 0.00 0.00 0.00 3.18
5101 7255 7.172190 CACTTGCTGAAAATCTCTAGAAAGACA 59.828 37.037 0.00 0.00 0.00 3.41
5102 7256 7.386299 TCACTTGCTGAAAATCTCTAGAAAGAC 59.614 37.037 0.00 0.00 0.00 3.01
5103 7257 7.386299 GTCACTTGCTGAAAATCTCTAGAAAGA 59.614 37.037 0.00 0.00 0.00 2.52
5104 7258 7.387397 AGTCACTTGCTGAAAATCTCTAGAAAG 59.613 37.037 0.00 0.00 0.00 2.62
5105 7259 7.220030 AGTCACTTGCTGAAAATCTCTAGAAA 58.780 34.615 0.00 0.00 0.00 2.52
5108 7262 7.093354 TGTAGTCACTTGCTGAAAATCTCTAG 58.907 38.462 0.00 0.00 0.00 2.43
5109 7263 6.993079 TGTAGTCACTTGCTGAAAATCTCTA 58.007 36.000 0.00 0.00 0.00 2.43
5111 7265 6.734104 ATGTAGTCACTTGCTGAAAATCTC 57.266 37.500 0.00 0.00 0.00 2.75
5112 7266 6.311445 CGTATGTAGTCACTTGCTGAAAATCT 59.689 38.462 0.00 0.00 0.00 2.40
5113 7267 6.455646 CCGTATGTAGTCACTTGCTGAAAATC 60.456 42.308 0.00 0.00 0.00 2.17
5114 7268 5.351465 CCGTATGTAGTCACTTGCTGAAAAT 59.649 40.000 0.00 0.00 0.00 1.82
5115 7269 4.688879 CCGTATGTAGTCACTTGCTGAAAA 59.311 41.667 0.00 0.00 0.00 2.29
5116 7270 4.021807 TCCGTATGTAGTCACTTGCTGAAA 60.022 41.667 0.00 0.00 0.00 2.69
5117 7271 3.508402 TCCGTATGTAGTCACTTGCTGAA 59.492 43.478 0.00 0.00 0.00 3.02
5118 7272 3.086282 TCCGTATGTAGTCACTTGCTGA 58.914 45.455 0.00 0.00 0.00 4.26
5119 7273 3.439293 CTCCGTATGTAGTCACTTGCTG 58.561 50.000 0.00 0.00 0.00 4.41
5120 7274 2.159226 GCTCCGTATGTAGTCACTTGCT 60.159 50.000 0.00 0.00 0.00 3.91
5121 7275 2.194271 GCTCCGTATGTAGTCACTTGC 58.806 52.381 0.00 0.00 0.00 4.01
5122 7276 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
5123 7277 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
5124 7278 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
5125 7279 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
5126 7280 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
5127 7281 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
5128 7282 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
5130 7284 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
5131 7285 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
5132 7286 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
5134 7288 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
5136 7290 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
5138 7292 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
5169 7323 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
5170 7324 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
5171 7325 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
5172 7326 7.772292 GGACTACCACATACGGATGTATATAGA 59.228 40.741 22.62 5.04 44.82 1.98
5173 7327 7.555195 TGGACTACCACATACGGATGTATATAG 59.445 40.741 14.23 16.35 44.82 1.31
5176 7330 5.633117 TGGACTACCACATACGGATGTATA 58.367 41.667 14.23 8.27 44.82 1.47
5208 7362 9.855021 CCGTTTCCAAATATTTGTCTTTTAGAT 57.145 29.630 23.24 0.00 36.45 1.98
5209 7363 9.069082 TCCGTTTCCAAATATTTGTCTTTTAGA 57.931 29.630 23.24 11.03 36.45 2.10
5210 7364 9.341899 CTCCGTTTCCAAATATTTGTCTTTTAG 57.658 33.333 23.24 9.12 36.45 1.85
5211 7365 8.301002 CCTCCGTTTCCAAATATTTGTCTTTTA 58.699 33.333 23.24 5.96 36.45 1.52
5212 7366 7.151976 CCTCCGTTTCCAAATATTTGTCTTTT 58.848 34.615 23.24 0.00 36.45 2.27
5213 7367 6.295067 CCCTCCGTTTCCAAATATTTGTCTTT 60.295 38.462 23.24 0.00 36.45 2.52
5214 7368 5.185056 CCCTCCGTTTCCAAATATTTGTCTT 59.815 40.000 23.24 0.00 36.45 3.01
5215 7369 4.705023 CCCTCCGTTTCCAAATATTTGTCT 59.295 41.667 23.24 0.00 36.45 3.41
5216 7370 4.703093 TCCCTCCGTTTCCAAATATTTGTC 59.297 41.667 23.24 11.68 36.45 3.18
5217 7371 4.668636 TCCCTCCGTTTCCAAATATTTGT 58.331 39.130 23.24 0.00 36.45 2.83
5218 7372 4.705023 ACTCCCTCCGTTTCCAAATATTTG 59.295 41.667 19.40 19.40 37.90 2.32
5219 7373 4.930696 ACTCCCTCCGTTTCCAAATATTT 58.069 39.130 0.00 0.00 0.00 1.40
5220 7374 4.586306 ACTCCCTCCGTTTCCAAATATT 57.414 40.909 0.00 0.00 0.00 1.28
5221 7375 4.966805 TCTACTCCCTCCGTTTCCAAATAT 59.033 41.667 0.00 0.00 0.00 1.28
5222 7376 4.355549 TCTACTCCCTCCGTTTCCAAATA 58.644 43.478 0.00 0.00 0.00 1.40
5223 7377 3.178865 TCTACTCCCTCCGTTTCCAAAT 58.821 45.455 0.00 0.00 0.00 2.32
5224 7378 2.612000 TCTACTCCCTCCGTTTCCAAA 58.388 47.619 0.00 0.00 0.00 3.28
5225 7379 2.314071 TCTACTCCCTCCGTTTCCAA 57.686 50.000 0.00 0.00 0.00 3.53
5226 7380 2.108168 CATCTACTCCCTCCGTTTCCA 58.892 52.381 0.00 0.00 0.00 3.53
5227 7381 1.413077 CCATCTACTCCCTCCGTTTCC 59.587 57.143 0.00 0.00 0.00 3.13
5228 7382 1.202545 GCCATCTACTCCCTCCGTTTC 60.203 57.143 0.00 0.00 0.00 2.78
5229 7383 0.831307 GCCATCTACTCCCTCCGTTT 59.169 55.000 0.00 0.00 0.00 3.60
5230 7384 0.032017 AGCCATCTACTCCCTCCGTT 60.032 55.000 0.00 0.00 0.00 4.44
5231 7385 0.757188 CAGCCATCTACTCCCTCCGT 60.757 60.000 0.00 0.00 0.00 4.69
5232 7386 1.467678 CCAGCCATCTACTCCCTCCG 61.468 65.000 0.00 0.00 0.00 4.63
5233 7387 0.105453 TCCAGCCATCTACTCCCTCC 60.105 60.000 0.00 0.00 0.00 4.30
5234 7388 1.691434 CTTCCAGCCATCTACTCCCTC 59.309 57.143 0.00 0.00 0.00 4.30
5235 7389 1.292242 TCTTCCAGCCATCTACTCCCT 59.708 52.381 0.00 0.00 0.00 4.20
5236 7390 1.691434 CTCTTCCAGCCATCTACTCCC 59.309 57.143 0.00 0.00 0.00 4.30
5237 7391 2.393646 ACTCTTCCAGCCATCTACTCC 58.606 52.381 0.00 0.00 0.00 3.85
5238 7392 5.452636 CCTTTACTCTTCCAGCCATCTACTC 60.453 48.000 0.00 0.00 0.00 2.59
5239 7393 4.407296 CCTTTACTCTTCCAGCCATCTACT 59.593 45.833 0.00 0.00 0.00 2.57
5240 7394 4.698575 CCTTTACTCTTCCAGCCATCTAC 58.301 47.826 0.00 0.00 0.00 2.59
5241 7395 3.134804 GCCTTTACTCTTCCAGCCATCTA 59.865 47.826 0.00 0.00 0.00 1.98
5242 7396 2.092699 GCCTTTACTCTTCCAGCCATCT 60.093 50.000 0.00 0.00 0.00 2.90
5496 7650 2.631062 TGAGCATACCTGTATAACCCGG 59.369 50.000 0.00 0.00 0.00 5.73
5516 7670 4.864916 AAGAAGCGTGTTATGCAGTATG 57.135 40.909 0.00 0.00 40.87 2.39
5562 7732 9.937175 GAGCAAGGTAGATTGTGAAATATTAAC 57.063 33.333 0.00 0.00 32.56 2.01
5584 7754 7.225725 TGGTAATTCACATGATATGATGAGCA 58.774 34.615 9.30 0.00 0.00 4.26
5617 7787 1.065199 GGGATCATCACAGTGCTCCAA 60.065 52.381 0.00 0.00 36.38 3.53
5823 8402 4.767578 ACCTTCAGATGATACTGCACAT 57.232 40.909 0.00 0.00 37.75 3.21
5912 8491 7.827729 ACCTAATATGCGGAGTAAAAAGAAACT 59.172 33.333 0.00 0.00 0.00 2.66
5924 8503 7.905604 TGAATTTGATACCTAATATGCGGAG 57.094 36.000 0.00 0.00 0.00 4.63
6026 8606 8.470040 AAATATCAACATTCACAATGCTGAAC 57.530 30.769 6.45 0.00 44.41 3.18
6128 9053 8.846943 TGCAAGACACTTGAAGAGAAAATATA 57.153 30.769 14.44 0.00 0.00 0.86
6131 9056 5.591877 ACTGCAAGACACTTGAAGAGAAAAT 59.408 36.000 21.68 0.67 37.43 1.82
6136 9061 3.461061 TCACTGCAAGACACTTGAAGAG 58.539 45.455 21.68 15.52 37.43 2.85
6168 9093 1.667722 GCCCAAAACAGAAGGCAGG 59.332 57.895 0.00 0.00 45.07 4.85
6293 9255 6.541641 GCAAAGTCCAGATCTCAGTATTCATT 59.458 38.462 0.00 0.00 0.00 2.57
6547 9509 5.302568 AGACTCAAGCATTTCACCAATCAAA 59.697 36.000 0.00 0.00 0.00 2.69
6677 9699 5.198207 TGATCTTTCATCATCACCTGCAAT 58.802 37.500 0.00 0.00 0.00 3.56
6770 9792 0.329261 TCAGGTGGGCTTTGATCCTG 59.671 55.000 0.00 0.00 44.69 3.86
6782 9804 3.181461 ACTTCTTGAGAGTGTTCAGGTGG 60.181 47.826 0.00 0.00 0.00 4.61
6794 9816 4.942944 TCCCATAGGTGTACTTCTTGAGA 58.057 43.478 0.00 0.00 0.00 3.27
6797 9819 4.192317 GCTTCCCATAGGTGTACTTCTTG 58.808 47.826 0.00 0.00 0.00 3.02
6880 9902 8.427276 TGTAAGATCTTCATGCTGAATCTGTAT 58.573 33.333 12.24 0.00 35.59 2.29
6918 9976 0.534412 ACAAGAGCGAGGGAGACATG 59.466 55.000 0.00 0.00 0.00 3.21
7274 10762 4.088071 GCGGCTTTTAACTCGACATTTTTC 59.912 41.667 0.00 0.00 0.00 2.29
7289 10778 0.602905 AAGTAGTCGCAGCGGCTTTT 60.603 50.000 29.72 19.20 39.37 2.27
7316 10805 0.106708 ACACGACACACAGCAGGATT 59.893 50.000 0.00 0.00 0.00 3.01
7323 10812 2.894307 TCTATCGACACGACACACAG 57.106 50.000 0.00 0.00 39.18 3.66
7375 10882 6.128634 ACTGCGGAAAAGAGTTTTATCTTACG 60.129 38.462 0.00 0.00 38.59 3.18
7376 10883 7.130303 ACTGCGGAAAAGAGTTTTATCTTAC 57.870 36.000 0.00 0.00 38.59 2.34
7377 10884 7.739498 AACTGCGGAAAAGAGTTTTATCTTA 57.261 32.000 0.00 0.00 38.59 2.10
7549 11070 5.971895 GCAGTAAATACAAAATGCCATGG 57.028 39.130 7.63 7.63 0.00 3.66
7686 11213 9.313118 CAAACTTATTTGCAAGGTTCTAAAACT 57.687 29.630 0.00 0.00 38.92 2.66
7728 11255 3.993081 GCATAGCCTACACATGCTCTTAG 59.007 47.826 0.00 0.00 41.44 2.18
7954 11484 6.917477 GTGCAAATTTGAATCACACAAGACTA 59.083 34.615 22.31 0.00 0.00 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.