Multiple sequence alignment - TraesCS1D01G029100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G029100 chr1D 100.000 6061 0 0 1 6061 11452927 11458987 0.000000e+00 11193.0
1 TraesCS1D01G029100 chr1D 87.066 2938 300 48 2624 5506 11178380 11181292 0.000000e+00 3247.0
2 TraesCS1D01G029100 chr1D 85.475 3050 351 58 2631 5623 11319551 11322565 0.000000e+00 3094.0
3 TraesCS1D01G029100 chr1D 87.495 2391 254 29 2721 5099 11495869 11498226 0.000000e+00 2717.0
4 TraesCS1D01G029100 chr1D 83.191 2921 392 57 2237 5108 11289224 11292094 0.000000e+00 2582.0
5 TraesCS1D01G029100 chr1D 83.038 1073 151 15 812 1863 11176861 11177923 0.000000e+00 944.0
6 TraesCS1D01G029100 chr1D 81.217 937 153 12 955 1871 11273065 11273998 0.000000e+00 734.0
7 TraesCS1D01G029100 chr1D 89.831 177 18 0 115 291 11272750 11272926 1.700000e-55 228.0
8 TraesCS1D01G029100 chr1D 92.500 80 6 0 5685 5764 11181657 11181736 1.380000e-21 115.0
9 TraesCS1D01G029100 chr1D 90.667 75 7 0 5719 5793 11458719 11458645 3.870000e-17 100.0
10 TraesCS1D01G029100 chr1A 86.610 2696 290 47 2613 5250 12589214 12586532 0.000000e+00 2913.0
11 TraesCS1D01G029100 chr1A 86.620 2556 286 32 2595 5140 13571104 13573613 0.000000e+00 2774.0
12 TraesCS1D01G029100 chr1A 86.950 2521 258 35 2631 5140 13415588 13418048 0.000000e+00 2767.0
13 TraesCS1D01G029100 chr1A 86.733 2495 277 27 2656 5140 13665433 13667883 0.000000e+00 2724.0
14 TraesCS1D01G029100 chr1A 88.666 2241 238 13 2597 4830 22614518 22612287 0.000000e+00 2717.0
15 TraesCS1D01G029100 chr1A 87.435 2292 262 22 2624 4903 13454617 13456894 0.000000e+00 2614.0
16 TraesCS1D01G029100 chr1A 85.726 2515 294 34 2631 5135 13348915 13351374 0.000000e+00 2595.0
17 TraesCS1D01G029100 chr1A 94.540 1044 46 7 831 1871 13663138 13664173 0.000000e+00 1602.0
18 TraesCS1D01G029100 chr1A 91.640 921 51 7 977 1871 22616064 22615144 0.000000e+00 1251.0
19 TraesCS1D01G029100 chr1A 84.981 1052 129 17 837 1871 13313956 13314995 0.000000e+00 1040.0
20 TraesCS1D01G029100 chr1A 85.311 1028 124 11 833 1844 12591014 12589998 0.000000e+00 1037.0
21 TraesCS1D01G029100 chr1A 82.852 1073 153 20 792 1846 13453075 13454134 0.000000e+00 933.0
22 TraesCS1D01G029100 chr1A 81.473 896 147 10 955 1834 13569484 13570376 0.000000e+00 717.0
23 TraesCS1D01G029100 chr1A 79.260 1027 177 19 820 1834 13347230 13348232 0.000000e+00 684.0
24 TraesCS1D01G029100 chr1A 82.759 696 109 4 1177 1861 12571053 12570358 1.440000e-170 610.0
25 TraesCS1D01G029100 chr1A 84.160 625 72 10 1931 2531 13664273 13664894 1.130000e-161 580.0
26 TraesCS1D01G029100 chr1A 95.339 236 10 1 415 650 12591953 12591719 2.060000e-99 374.0
27 TraesCS1D01G029100 chr1A 84.238 387 27 13 309 670 13662266 13662643 4.500000e-91 346.0
28 TraesCS1D01G029100 chr1A 97.059 170 5 0 3 172 22616240 22616071 2.760000e-73 287.0
29 TraesCS1D01G029100 chr1A 89.041 219 16 6 5406 5623 12586144 12585933 1.300000e-66 265.0
30 TraesCS1D01G029100 chr1A 80.253 395 35 19 309 671 13313120 13313503 2.170000e-64 257.0
31 TraesCS1D01G029100 chr1A 91.892 185 13 2 5876 6059 13667935 13668118 2.170000e-64 257.0
32 TraesCS1D01G029100 chr1A 89.744 195 16 4 5866 6059 13418092 13418283 4.690000e-61 246.0
33 TraesCS1D01G029100 chr1A 90.909 154 8 2 306 453 13568261 13568414 1.030000e-47 202.0
34 TraesCS1D01G029100 chr1A 85.556 180 24 1 5368 5545 13343072 13343251 2.880000e-43 187.0
35 TraesCS1D01G029100 chr1A 91.525 118 8 2 309 424 13452569 13452686 1.750000e-35 161.0
36 TraesCS1D01G029100 chr1A 95.833 96 4 0 576 671 12591569 12591474 8.130000e-34 156.0
37 TraesCS1D01G029100 chr1A 95.789 95 4 0 577 671 13568455 13568549 2.930000e-33 154.0
38 TraesCS1D01G029100 chr1A 85.315 143 20 1 5414 5556 13573995 13574136 4.900000e-31 147.0
39 TraesCS1D01G029100 chr1A 84.091 132 14 5 5390 5516 13457370 13457499 2.970000e-23 121.0
40 TraesCS1D01G029100 chr1A 89.552 67 6 1 672 737 13313844 13313910 3.890000e-12 84.2
41 TraesCS1D01G029100 chr1A 92.857 56 1 2 5006 5061 13456960 13457012 1.810000e-10 78.7
42 TraesCS1D01G029100 chr1A 95.745 47 2 0 672 718 13662671 13662717 6.510000e-10 76.8
43 TraesCS1D01G029100 chr1B 85.850 2523 310 24 2595 5108 17017347 17014863 0.000000e+00 2638.0
44 TraesCS1D01G029100 chr1B 78.577 1209 212 31 955 2125 16529984 16531183 0.000000e+00 754.0
45 TraesCS1D01G029100 chr1B 81.898 906 149 10 955 1846 17018982 17018078 0.000000e+00 750.0
46 TraesCS1D01G029100 chr1B 77.844 1169 195 39 1000 2133 16925811 16926950 0.000000e+00 665.0
47 TraesCS1D01G029100 chr1B 82.520 246 36 4 5339 5578 16694090 16694334 6.160000e-50 209.0
48 TraesCS1D01G029100 chr1B 87.640 178 21 1 309 485 17338403 17338580 7.960000e-49 206.0
49 TraesCS1D01G029100 chr1B 91.150 113 6 1 312 420 17019828 17019716 3.780000e-32 150.0
50 TraesCS1D01G029100 chr1B 76.364 220 29 9 519 718 16517582 16517798 5.000000e-16 97.1
51 TraesCS1D01G029100 chrUn 87.640 178 21 1 309 485 317005895 317005718 7.960000e-49 206.0
52 TraesCS1D01G029100 chrUn 87.640 178 21 1 309 485 317985695 317985518 7.960000e-49 206.0
53 TraesCS1D01G029100 chrUn 87.640 178 21 1 309 485 346216604 346216781 7.960000e-49 206.0
54 TraesCS1D01G029100 chr6D 96.774 31 1 0 1980 2010 32252157 32252187 1.100000e-02 52.8
55 TraesCS1D01G029100 chr2B 96.774 31 1 0 1980 2010 627003242 627003272 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G029100 chr1D 11452927 11458987 6060 False 11193.000000 11193 100.000000 1 6061 1 chr1D.!!$F3 6060
1 TraesCS1D01G029100 chr1D 11319551 11322565 3014 False 3094.000000 3094 85.475000 2631 5623 1 chr1D.!!$F2 2992
2 TraesCS1D01G029100 chr1D 11495869 11498226 2357 False 2717.000000 2717 87.495000 2721 5099 1 chr1D.!!$F4 2378
3 TraesCS1D01G029100 chr1D 11289224 11292094 2870 False 2582.000000 2582 83.191000 2237 5108 1 chr1D.!!$F1 2871
4 TraesCS1D01G029100 chr1D 11176861 11181736 4875 False 1435.333333 3247 87.534667 812 5764 3 chr1D.!!$F5 4952
5 TraesCS1D01G029100 chr1D 11272750 11273998 1248 False 481.000000 734 85.524000 115 1871 2 chr1D.!!$F6 1756
6 TraesCS1D01G029100 chr1A 13415588 13418283 2695 False 1506.500000 2767 88.347000 2631 6059 2 chr1A.!!$F3 3428
7 TraesCS1D01G029100 chr1A 22612287 22616240 3953 True 1418.333333 2717 92.455000 3 4830 3 chr1A.!!$R3 4827
8 TraesCS1D01G029100 chr1A 13343072 13351374 8302 False 1155.333333 2595 83.514000 820 5545 3 chr1A.!!$F2 4725
9 TraesCS1D01G029100 chr1A 12585933 12591953 6020 True 949.000000 2913 90.426800 415 5623 5 chr1A.!!$R2 5208
10 TraesCS1D01G029100 chr1A 13662266 13668118 5852 False 930.966667 2724 89.551333 309 6059 6 chr1A.!!$F6 5750
11 TraesCS1D01G029100 chr1A 13568261 13574136 5875 False 798.800000 2774 88.021200 306 5556 5 chr1A.!!$F5 5250
12 TraesCS1D01G029100 chr1A 13452569 13457499 4930 False 781.540000 2614 87.752000 309 5516 5 chr1A.!!$F4 5207
13 TraesCS1D01G029100 chr1A 12570358 12571053 695 True 610.000000 610 82.759000 1177 1861 1 chr1A.!!$R1 684
14 TraesCS1D01G029100 chr1A 13313120 13314995 1875 False 460.400000 1040 84.928667 309 1871 3 chr1A.!!$F1 1562
15 TraesCS1D01G029100 chr1B 17014863 17019828 4965 True 1179.333333 2638 86.299333 312 5108 3 chr1B.!!$R1 4796
16 TraesCS1D01G029100 chr1B 16529984 16531183 1199 False 754.000000 754 78.577000 955 2125 1 chr1B.!!$F2 1170
17 TraesCS1D01G029100 chr1B 16925811 16926950 1139 False 665.000000 665 77.844000 1000 2133 1 chr1B.!!$F4 1133

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
723 1051 0.104304 CGCTGACCCGGCTATAAGTT 59.896 55.000 0.0 0.0 32.89 2.66 F
1479 4968 0.180642 ATCCTCGTCTCCGTGCTCTA 59.819 55.000 0.0 0.0 35.01 2.43 F
2313 6456 0.035439 GCACCAAAGGCTAGCCAGTA 60.035 55.000 34.7 0.0 38.92 2.74 F
2997 7510 0.109781 CCGCATTTTTGGTGTCTCCG 60.110 55.000 0.0 0.0 39.52 4.63 F
2999 7512 1.135972 CGCATTTTTGGTGTCTCCGAG 60.136 52.381 0.0 0.0 39.52 4.63 F
4756 9278 0.110688 CGTGTCTGCGTTTGGATGTG 60.111 55.000 0.0 0.0 0.00 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2246 6389 0.037605 AGAACGCGGTGGGTTAAGAG 60.038 55.0 12.47 0.00 38.76 2.85 R
2999 7512 0.376152 CAGCCGATGAGCAACATGAC 59.624 55.0 0.00 0.00 39.56 3.06 R
4145 8664 0.329596 CCCTCAGCCTTGCTAGGTTT 59.670 55.0 15.85 1.96 44.00 3.27 R
4584 9106 0.391793 TGCGTTGCGGATCCACAATA 60.392 50.0 17.87 5.84 0.00 1.90 R
4852 9374 0.526211 TGCTATACTCGGGCGCATAG 59.474 55.0 10.83 7.80 0.00 2.23 R
5624 10582 0.109153 AGTGCTGAATGCTGACCACA 59.891 50.0 0.00 0.00 43.37 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 2.357034 TTTCTCCACTGACGGCGC 60.357 61.111 6.90 0.00 0.00 6.53
182 183 0.381801 AACAGCAAGCAAGAACCGTG 59.618 50.000 0.00 0.00 0.00 4.94
183 184 1.283793 CAGCAAGCAAGAACCGTGG 59.716 57.895 0.00 0.00 0.00 4.94
191 192 1.814248 GCAAGAACCGTGGAGTTTCCT 60.814 52.381 0.00 0.00 37.46 3.36
206 207 2.479566 TTCCTGTCATTCAGAGCACC 57.520 50.000 0.00 0.00 46.27 5.01
221 222 1.547372 AGCACCATGCCTCAAATTCAC 59.453 47.619 0.00 0.00 46.52 3.18
250 251 4.873827 CGTCTAGCTGCCTGGTAAATTTAA 59.126 41.667 0.00 0.00 0.00 1.52
291 292 5.858381 TCTGCTCTACTGAAATGTTTCACT 58.142 37.500 4.16 0.00 41.88 3.41
293 294 7.615403 TCTGCTCTACTGAAATGTTTCACTAT 58.385 34.615 4.16 0.00 41.88 2.12
295 296 8.256611 TGCTCTACTGAAATGTTTCACTATTC 57.743 34.615 4.16 0.00 41.88 1.75
296 297 8.097038 TGCTCTACTGAAATGTTTCACTATTCT 58.903 33.333 4.16 0.00 41.88 2.40
297 298 8.386606 GCTCTACTGAAATGTTTCACTATTCTG 58.613 37.037 4.16 0.00 41.88 3.02
298 299 8.256611 TCTACTGAAATGTTTCACTATTCTGC 57.743 34.615 4.16 0.00 41.88 4.26
301 302 6.265196 ACTGAAATGTTTCACTATTCTGCCAA 59.735 34.615 4.16 0.00 41.88 4.52
302 303 6.446318 TGAAATGTTTCACTATTCTGCCAAC 58.554 36.000 4.16 0.00 41.88 3.77
323 324 6.318900 CCAACTGTTCTTGGGTATATTTCCTC 59.681 42.308 0.00 0.00 37.62 3.71
395 405 3.883830 TCTCCTGCTTGAGATTCTGAC 57.116 47.619 0.00 0.00 36.48 3.51
548 581 1.634973 TGCCTTGAACAGATCCATCCA 59.365 47.619 0.00 0.00 0.00 3.41
559 592 2.846206 AGATCCATCCACCTTGTTGCTA 59.154 45.455 0.00 0.00 0.00 3.49
609 866 6.721321 TCTTGTCGATTTGTTTCCAGTAAAC 58.279 36.000 0.00 0.00 46.46 2.01
705 1033 2.802792 CACCATGCATCCAAGGCG 59.197 61.111 0.00 0.00 33.12 5.52
720 1048 2.420043 GCGCTGACCCGGCTATAA 59.580 61.111 0.00 0.00 32.89 0.98
722 1050 1.740285 CGCTGACCCGGCTATAAGT 59.260 57.895 0.00 0.00 32.89 2.24
723 1051 0.104304 CGCTGACCCGGCTATAAGTT 59.896 55.000 0.00 0.00 32.89 2.66
724 1052 1.867166 GCTGACCCGGCTATAAGTTC 58.133 55.000 0.00 0.00 32.24 3.01
734 1153 7.799081 ACCCGGCTATAAGTTCTTATAAGTTT 58.201 34.615 12.19 8.19 0.00 2.66
763 1210 4.715523 CCGCCGTGTTGTCCCCAT 62.716 66.667 0.00 0.00 0.00 4.00
764 1211 3.124921 CGCCGTGTTGTCCCCATC 61.125 66.667 0.00 0.00 0.00 3.51
861 1912 1.863325 TCTGCTCTCCTCTGAAGCAT 58.137 50.000 2.52 0.00 34.85 3.79
921 4391 0.823356 TGGCTTGCCAACTCAGTTCC 60.823 55.000 12.40 0.00 0.00 3.62
922 4392 0.823356 GGCTTGCCAACTCAGTTCCA 60.823 55.000 6.79 0.00 0.00 3.53
923 4393 0.312102 GCTTGCCAACTCAGTTCCAC 59.688 55.000 0.00 0.00 0.00 4.02
924 4394 0.954452 CTTGCCAACTCAGTTCCACC 59.046 55.000 0.00 0.00 0.00 4.61
945 4415 4.410492 CAGAGCTTGGATTGTGTTACAC 57.590 45.455 8.76 8.76 34.56 2.90
949 4419 3.436704 AGCTTGGATTGTGTTACACATCG 59.563 43.478 19.32 7.64 44.16 3.84
1235 4709 2.362397 TCTCCTACGTCATTGAGGATGC 59.638 50.000 13.00 0.00 38.69 3.91
1363 4846 4.102996 TGGATAAGCATGGAATAGCTCACA 59.897 41.667 0.00 0.00 40.90 3.58
1479 4968 0.180642 ATCCTCGTCTCCGTGCTCTA 59.819 55.000 0.00 0.00 35.01 2.43
1542 5031 3.389329 GGGATCAGGAGCTCATGAGTTTA 59.611 47.826 31.82 12.71 40.16 2.01
1846 5361 6.897259 ATGCATCACTTACAATGAAAATGC 57.103 33.333 0.00 0.00 32.61 3.56
1847 5362 5.170021 TGCATCACTTACAATGAAAATGCC 58.830 37.500 0.00 0.00 31.49 4.40
1849 5364 5.062558 GCATCACTTACAATGAAAATGCCAC 59.937 40.000 0.00 0.00 0.00 5.01
1871 5395 8.850156 GCCACTTATCATATGTTTTTCCTATGT 58.150 33.333 1.90 0.00 0.00 2.29
1899 5446 8.627403 TCAATATCTTGTAACCTTAGTACCTCG 58.373 37.037 0.00 0.00 33.87 4.63
1912 5459 1.518056 TACCTCGCGTCAAACGGTCT 61.518 55.000 5.77 0.00 42.82 3.85
1915 5467 2.355363 CGCGTCAAACGGTCTGGA 60.355 61.111 0.00 0.00 42.82 3.86
1916 5468 1.952133 CGCGTCAAACGGTCTGGAA 60.952 57.895 0.00 0.00 42.82 3.53
1921 5473 2.742053 CGTCAAACGGTCTGGAATCATT 59.258 45.455 0.00 0.00 38.08 2.57
1922 5474 3.188460 CGTCAAACGGTCTGGAATCATTT 59.812 43.478 0.00 0.00 38.08 2.32
1924 5488 5.528870 GTCAAACGGTCTGGAATCATTTTT 58.471 37.500 0.00 0.00 0.00 1.94
1951 5521 7.816640 TCATTAAGTTCACCTTTGCTAACATC 58.183 34.615 0.00 0.00 34.46 3.06
1960 5530 5.048991 CACCTTTGCTAACATCCGTAGTTTT 60.049 40.000 0.00 0.00 0.00 2.43
1961 5531 5.048991 ACCTTTGCTAACATCCGTAGTTTTG 60.049 40.000 0.00 0.00 0.00 2.44
1972 5542 6.877322 ACATCCGTAGTTTTGCACTAAACTAT 59.123 34.615 20.94 8.43 46.49 2.12
1976 5546 9.439500 TCCGTAGTTTTGCACTAAACTATTAAT 57.561 29.630 20.94 0.00 46.49 1.40
2037 5644 4.959210 TCTCTGAACCTCCTCTCCTTTATG 59.041 45.833 0.00 0.00 0.00 1.90
2128 6271 7.786178 TTAAGAAATCCACCTCAACATATCG 57.214 36.000 0.00 0.00 0.00 2.92
2129 6272 5.359194 AGAAATCCACCTCAACATATCGT 57.641 39.130 0.00 0.00 0.00 3.73
2131 6274 6.281405 AGAAATCCACCTCAACATATCGTAC 58.719 40.000 0.00 0.00 0.00 3.67
2132 6275 5.607939 AATCCACCTCAACATATCGTACA 57.392 39.130 0.00 0.00 0.00 2.90
2133 6276 5.607939 ATCCACCTCAACATATCGTACAA 57.392 39.130 0.00 0.00 0.00 2.41
2135 6278 6.718522 TCCACCTCAACATATCGTACAATA 57.281 37.500 0.00 0.00 0.00 1.90
2136 6279 6.509656 TCCACCTCAACATATCGTACAATAC 58.490 40.000 0.00 0.00 0.00 1.89
2137 6280 6.097129 TCCACCTCAACATATCGTACAATACA 59.903 38.462 0.00 0.00 0.00 2.29
2138 6281 6.929049 CCACCTCAACATATCGTACAATACAT 59.071 38.462 0.00 0.00 0.00 2.29
2139 6282 7.095649 CCACCTCAACATATCGTACAATACATG 60.096 40.741 0.00 0.00 0.00 3.21
2140 6283 6.423905 ACCTCAACATATCGTACAATACATGC 59.576 38.462 0.00 0.00 0.00 4.06
2142 6285 7.172654 TCAACATATCGTACAATACATGCAC 57.827 36.000 0.00 0.00 0.00 4.57
2143 6286 6.201997 TCAACATATCGTACAATACATGCACC 59.798 38.462 0.00 0.00 0.00 5.01
2144 6287 5.606505 ACATATCGTACAATACATGCACCA 58.393 37.500 0.00 0.00 0.00 4.17
2146 6289 6.540551 ACATATCGTACAATACATGCACCAAA 59.459 34.615 0.00 0.00 0.00 3.28
2147 6290 4.937696 TCGTACAATACATGCACCAAAG 57.062 40.909 0.00 0.00 0.00 2.77
2148 6291 4.570930 TCGTACAATACATGCACCAAAGA 58.429 39.130 0.00 0.00 0.00 2.52
2149 6292 4.390603 TCGTACAATACATGCACCAAAGAC 59.609 41.667 0.00 0.00 0.00 3.01
2150 6293 4.153296 CGTACAATACATGCACCAAAGACA 59.847 41.667 0.00 0.00 0.00 3.41
2151 6294 4.503741 ACAATACATGCACCAAAGACAC 57.496 40.909 0.00 0.00 0.00 3.67
2152 6295 3.888323 ACAATACATGCACCAAAGACACA 59.112 39.130 0.00 0.00 0.00 3.72
2157 6300 4.121317 ACATGCACCAAAGACACAAAATG 58.879 39.130 0.00 0.00 0.00 2.32
2160 6303 5.781210 TGCACCAAAGACACAAAATGATA 57.219 34.783 0.00 0.00 0.00 2.15
2166 6309 6.869913 ACCAAAGACACAAAATGATAAGCATG 59.130 34.615 0.00 0.00 37.28 4.06
2169 6312 8.592155 CAAAGACACAAAATGATAAGCATGATG 58.408 33.333 0.00 0.00 37.28 3.07
2170 6313 7.400599 AGACACAAAATGATAAGCATGATGT 57.599 32.000 0.00 0.00 37.28 3.06
2173 6316 7.604549 ACACAAAATGATAAGCATGATGTCAA 58.395 30.769 0.00 0.00 37.28 3.18
2179 6322 9.961265 AAATGATAAGCATGATGTCAATTGTAG 57.039 29.630 5.13 0.00 37.28 2.74
2195 6338 9.801873 GTCAATTGTAGCAAATAATACACCAAT 57.198 29.630 5.13 0.00 31.83 3.16
2201 6344 8.349245 TGTAGCAAATAATACACCAATACATGC 58.651 33.333 0.00 0.00 0.00 4.06
2203 6346 7.202526 AGCAAATAATACACCAATACATGCAC 58.797 34.615 0.00 0.00 0.00 4.57
2204 6347 6.420604 GCAAATAATACACCAATACATGCACC 59.579 38.462 0.00 0.00 0.00 5.01
2205 6348 7.684187 GCAAATAATACACCAATACATGCACCT 60.684 37.037 0.00 0.00 0.00 4.00
2208 6351 9.586732 AATAATACACCAATACATGCACCTAAT 57.413 29.630 0.00 0.00 0.00 1.73
2211 6354 8.988546 ATACACCAATACATGCACCTAATAAA 57.011 30.769 0.00 0.00 0.00 1.40
2214 6357 7.396055 ACACCAATACATGCACCTAATAAAACT 59.604 33.333 0.00 0.00 0.00 2.66
2215 6358 8.250332 CACCAATACATGCACCTAATAAAACTT 58.750 33.333 0.00 0.00 0.00 2.66
2259 6402 4.638304 TCTTTCTTTCTCTTAACCCACCG 58.362 43.478 0.00 0.00 0.00 4.94
2261 6404 1.076332 CTTTCTCTTAACCCACCGCG 58.924 55.000 0.00 0.00 0.00 6.46
2264 6407 0.037975 TCTCTTAACCCACCGCGTTC 60.038 55.000 4.92 0.00 0.00 3.95
2265 6408 0.037605 CTCTTAACCCACCGCGTTCT 60.038 55.000 4.92 0.00 0.00 3.01
2266 6409 1.203052 CTCTTAACCCACCGCGTTCTA 59.797 52.381 4.92 0.00 0.00 2.10
2270 6413 1.900245 AACCCACCGCGTTCTAAAAT 58.100 45.000 4.92 0.00 0.00 1.82
2271 6414 2.766345 ACCCACCGCGTTCTAAAATA 57.234 45.000 4.92 0.00 0.00 1.40
2274 6417 3.437741 ACCCACCGCGTTCTAAAATAAAG 59.562 43.478 4.92 0.00 0.00 1.85
2275 6418 3.685756 CCCACCGCGTTCTAAAATAAAGA 59.314 43.478 4.92 0.00 0.00 2.52
2276 6419 4.436451 CCCACCGCGTTCTAAAATAAAGAC 60.436 45.833 4.92 0.00 0.00 3.01
2278 6421 5.106830 CCACCGCGTTCTAAAATAAAGACTT 60.107 40.000 4.92 0.00 0.00 3.01
2283 6426 9.047871 CCGCGTTCTAAAATAAAGACTTTAAAG 57.952 33.333 13.76 13.76 0.00 1.85
2284 6427 9.590088 CGCGTTCTAAAATAAAGACTTTAAAGT 57.410 29.630 20.67 20.67 43.16 2.66
2307 6450 3.065925 GCTTATCTTGCACCAAAGGCTAG 59.934 47.826 0.00 0.00 35.81 3.42
2310 6453 0.895100 CTTGCACCAAAGGCTAGCCA 60.895 55.000 34.70 9.43 38.92 4.75
2311 6454 0.895100 TTGCACCAAAGGCTAGCCAG 60.895 55.000 34.70 22.69 38.92 4.85
2313 6456 0.035439 GCACCAAAGGCTAGCCAGTA 60.035 55.000 34.70 0.00 38.92 2.74
2314 6457 1.613255 GCACCAAAGGCTAGCCAGTAA 60.613 52.381 34.70 0.00 38.92 2.24
2315 6458 2.945890 GCACCAAAGGCTAGCCAGTAAT 60.946 50.000 34.70 14.83 38.92 1.89
2317 6460 3.763897 CACCAAAGGCTAGCCAGTAATTT 59.236 43.478 34.70 22.20 38.92 1.82
2319 6462 4.462834 ACCAAAGGCTAGCCAGTAATTTTC 59.537 41.667 34.70 4.29 38.92 2.29
2320 6463 4.142160 CCAAAGGCTAGCCAGTAATTTTCC 60.142 45.833 34.70 3.73 38.92 3.13
2321 6464 4.592997 AAGGCTAGCCAGTAATTTTCCT 57.407 40.909 34.70 7.25 38.92 3.36
2322 6465 3.891049 AGGCTAGCCAGTAATTTTCCTG 58.109 45.455 34.70 0.00 38.92 3.86
2324 6467 4.018415 AGGCTAGCCAGTAATTTTCCTGAA 60.018 41.667 34.70 0.00 38.92 3.02
2325 6468 4.889995 GGCTAGCCAGTAATTTTCCTGAAT 59.110 41.667 29.33 0.00 35.81 2.57
2327 6470 5.221126 GCTAGCCAGTAATTTTCCTGAATGG 60.221 44.000 2.29 0.00 37.10 3.16
2328 6471 3.785486 GCCAGTAATTTTCCTGAATGGC 58.215 45.455 0.00 0.00 44.48 4.40
2329 6472 3.430790 GCCAGTAATTTTCCTGAATGGCC 60.431 47.826 0.00 0.00 44.87 5.36
2330 6473 3.768757 CCAGTAATTTTCCTGAATGGCCA 59.231 43.478 8.56 8.56 35.26 5.36
2331 6474 4.222588 CCAGTAATTTTCCTGAATGGCCAA 59.777 41.667 10.96 0.00 35.26 4.52
2332 6475 5.279910 CCAGTAATTTTCCTGAATGGCCAAA 60.280 40.000 10.96 0.00 35.26 3.28
2333 6476 5.639082 CAGTAATTTTCCTGAATGGCCAAAC 59.361 40.000 10.96 7.66 35.26 2.93
2334 6477 4.703379 AATTTTCCTGAATGGCCAAACA 57.297 36.364 10.96 12.47 35.26 2.83
2335 6478 4.703379 ATTTTCCTGAATGGCCAAACAA 57.297 36.364 10.96 0.00 35.26 2.83
2338 6481 4.703379 TTCCTGAATGGCCAAACAAAAT 57.297 36.364 10.96 0.00 35.26 1.82
2341 6484 5.444176 TCCTGAATGGCCAAACAAAATTTT 58.556 33.333 10.96 0.00 35.26 1.82
2361 6504 9.598517 AAATTTTAATTTGCTCTTCACTGTCAA 57.401 25.926 0.00 0.00 37.24 3.18
2368 6511 6.545504 TTGCTCTTCACTGTCAAATTCTAC 57.454 37.500 0.00 0.00 0.00 2.59
2371 6514 6.767902 TGCTCTTCACTGTCAAATTCTACTTT 59.232 34.615 0.00 0.00 0.00 2.66
2372 6515 7.283127 TGCTCTTCACTGTCAAATTCTACTTTT 59.717 33.333 0.00 0.00 0.00 2.27
2378 6521 9.621629 TCACTGTCAAATTCTACTTTTCCTTTA 57.378 29.630 0.00 0.00 0.00 1.85
2384 6527 8.739972 TCAAATTCTACTTTTCCTTTATGCCTC 58.260 33.333 0.00 0.00 0.00 4.70
2388 6532 7.687941 TCTACTTTTCCTTTATGCCTCTTTG 57.312 36.000 0.00 0.00 0.00 2.77
2400 6834 7.916914 TTATGCCTCTTTGGAAACTTACTAC 57.083 36.000 0.00 0.00 38.35 2.73
2402 6836 4.349930 TGCCTCTTTGGAAACTTACTACCT 59.650 41.667 0.00 0.00 38.35 3.08
2406 6840 5.876357 TCTTTGGAAACTTACTACCTGCAT 58.124 37.500 0.00 0.00 0.00 3.96
2410 6844 7.624360 TTGGAAACTTACTACCTGCATAATG 57.376 36.000 0.00 0.00 0.00 1.90
2412 6846 6.597672 TGGAAACTTACTACCTGCATAATGTG 59.402 38.462 0.00 0.00 0.00 3.21
2429 6863 2.363683 TGTGCACGGAATGATAATGCA 58.636 42.857 13.13 0.00 43.70 3.96
2437 6873 6.151004 CACGGAATGATAATGCAATGCAATA 58.849 36.000 13.45 9.07 43.62 1.90
2438 6878 6.641723 CACGGAATGATAATGCAATGCAATAA 59.358 34.615 13.45 0.41 43.62 1.40
2455 6895 4.323868 GCAATAAGAGTCTCCAGGAGGTTT 60.324 45.833 17.10 8.42 35.89 3.27
2468 6908 2.174854 AGGAGGTTTATTAGCGGCCATT 59.825 45.455 2.24 0.00 0.00 3.16
2486 6926 3.181480 CCATTTAGTAAATTGGTGGGCCG 60.181 47.826 5.34 0.00 37.67 6.13
2508 6948 2.674420 TCTATACCCGGGTCTTTCCAG 58.326 52.381 34.27 18.32 38.11 3.86
2514 6954 1.139058 CCCGGGTCTTTCCAGTAGATG 59.861 57.143 14.18 0.00 38.11 2.90
2515 6955 1.473434 CCGGGTCTTTCCAGTAGATGC 60.473 57.143 0.00 0.00 38.11 3.91
2557 7043 8.831715 ATTTGAAATGTCTTCCAAATTGGTAC 57.168 30.769 12.28 9.46 39.03 3.34
2558 7044 7.595819 TTGAAATGTCTTCCAAATTGGTACT 57.404 32.000 12.28 0.00 39.03 2.73
2560 7046 5.880054 AATGTCTTCCAAATTGGTACTCG 57.120 39.130 12.28 0.00 39.03 4.18
2561 7047 4.345859 TGTCTTCCAAATTGGTACTCGT 57.654 40.909 12.28 0.00 39.03 4.18
2562 7048 4.312443 TGTCTTCCAAATTGGTACTCGTC 58.688 43.478 12.28 0.00 39.03 4.20
2563 7049 4.039973 TGTCTTCCAAATTGGTACTCGTCT 59.960 41.667 12.28 0.00 39.03 4.18
2565 7051 5.469084 GTCTTCCAAATTGGTACTCGTCTTT 59.531 40.000 12.28 0.00 39.03 2.52
2566 7052 5.699458 TCTTCCAAATTGGTACTCGTCTTTC 59.301 40.000 12.28 0.00 39.03 2.62
2567 7053 4.963373 TCCAAATTGGTACTCGTCTTTCA 58.037 39.130 12.28 0.00 39.03 2.69
2568 7054 5.369833 TCCAAATTGGTACTCGTCTTTCAA 58.630 37.500 12.28 0.00 39.03 2.69
2569 7055 5.823570 TCCAAATTGGTACTCGTCTTTCAAA 59.176 36.000 12.28 0.00 39.03 2.69
2571 7057 7.662258 TCCAAATTGGTACTCGTCTTTCAAATA 59.338 33.333 12.28 0.00 39.03 1.40
2573 7059 8.717821 CAAATTGGTACTCGTCTTTCAAATAGA 58.282 33.333 0.00 0.00 0.00 1.98
2574 7060 9.449719 AAATTGGTACTCGTCTTTCAAATAGAT 57.550 29.630 0.00 0.00 0.00 1.98
2575 7061 8.649973 ATTGGTACTCGTCTTTCAAATAGATC 57.350 34.615 0.00 0.00 0.00 2.75
2577 7063 8.515695 TGGTACTCGTCTTTCAAATAGATCTA 57.484 34.615 4.57 4.57 0.00 1.98
2578 7064 8.404000 TGGTACTCGTCTTTCAAATAGATCTAC 58.596 37.037 4.10 0.00 0.00 2.59
2579 7065 7.861872 GGTACTCGTCTTTCAAATAGATCTACC 59.138 40.741 4.10 0.00 0.00 3.18
2580 7066 7.648039 ACTCGTCTTTCAAATAGATCTACCT 57.352 36.000 4.10 0.00 0.00 3.08
2581 7067 8.749026 ACTCGTCTTTCAAATAGATCTACCTA 57.251 34.615 4.10 0.00 0.00 3.08
2582 7068 9.186837 ACTCGTCTTTCAAATAGATCTACCTAA 57.813 33.333 4.10 0.00 0.00 2.69
2585 7071 9.119329 CGTCTTTCAAATAGATCTACCTAATCG 57.881 37.037 4.10 0.00 0.00 3.34
2586 7072 9.968870 GTCTTTCAAATAGATCTACCTAATCGT 57.031 33.333 4.10 0.00 0.00 3.73
2622 7130 7.992754 AATTCTTCTTCTATGTATGGCCATC 57.007 36.000 24.80 14.58 0.00 3.51
2627 7135 5.019470 TCTTCTATGTATGGCCATCGATCT 58.981 41.667 24.80 0.00 0.00 2.75
2629 7137 5.836821 TCTATGTATGGCCATCGATCTAC 57.163 43.478 24.80 14.51 0.00 2.59
2718 7227 2.096496 GCAGTTCATAACGCATGCTTCT 59.904 45.455 17.13 2.06 34.35 2.85
2720 7229 4.201812 GCAGTTCATAACGCATGCTTCTTA 60.202 41.667 17.13 8.77 34.35 2.10
2724 7233 7.007725 CAGTTCATAACGCATGCTTCTTAAAAG 59.992 37.037 17.13 0.00 34.35 2.27
2734 7243 7.149015 CGCATGCTTCTTAAAAGATCATATTGC 60.149 37.037 17.13 7.80 34.49 3.56
2736 7245 7.042797 TGCTTCTTAAAAGATCATATTGCCC 57.957 36.000 0.00 0.00 34.49 5.36
2742 7251 9.071276 TCTTAAAAGATCATATTGCCCAGATTC 57.929 33.333 0.00 0.00 0.00 2.52
2744 7253 7.850935 AAAAGATCATATTGCCCAGATTCAT 57.149 32.000 0.00 0.00 0.00 2.57
2749 7258 4.996758 TCATATTGCCCAGATTCATACGTG 59.003 41.667 0.00 0.00 0.00 4.49
2754 7263 2.483013 GCCCAGATTCATACGTGTGCTA 60.483 50.000 7.52 0.00 0.00 3.49
2770 7279 7.349711 ACGTGTGCTACTTATTAGTTTGTTTG 58.650 34.615 0.00 0.00 35.78 2.93
2775 7284 9.166126 GTGCTACTTATTAGTTTGTTTGTGAAC 57.834 33.333 0.00 0.00 35.78 3.18
2780 7289 8.194104 ACTTATTAGTTTGTTTGTGAACATGCA 58.806 29.630 0.00 0.00 44.71 3.96
2781 7290 6.826893 ATTAGTTTGTTTGTGAACATGCAC 57.173 33.333 0.00 0.00 44.71 4.57
2782 7291 4.185467 AGTTTGTTTGTGAACATGCACA 57.815 36.364 2.41 2.41 44.71 4.57
2792 7303 4.095334 TGTGAACATGCACAATCTAGATGC 59.905 41.667 5.86 7.95 45.08 3.91
2803 7314 6.051074 CACAATCTAGATGCATAGTTCCACA 58.949 40.000 5.86 0.00 0.00 4.17
2804 7315 6.709397 CACAATCTAGATGCATAGTTCCACAT 59.291 38.462 5.86 0.00 0.00 3.21
2821 7333 8.103305 AGTTCCACATATATATTCACATGTCCC 58.897 37.037 0.00 0.00 29.31 4.46
2823 7335 8.161640 TCCACATATATATTCACATGTCCCAT 57.838 34.615 0.00 0.00 29.31 4.00
2831 7344 2.368439 TCACATGTCCCATAGCTTTGC 58.632 47.619 0.00 0.00 0.00 3.68
2832 7345 1.406539 CACATGTCCCATAGCTTTGCC 59.593 52.381 0.00 0.00 0.00 4.52
2837 7350 3.754965 TGTCCCATAGCTTTGCCATATC 58.245 45.455 0.00 0.00 0.00 1.63
2838 7351 3.138098 TGTCCCATAGCTTTGCCATATCA 59.862 43.478 0.00 0.00 0.00 2.15
2842 7355 4.261741 CCCATAGCTTTGCCATATCAACAC 60.262 45.833 0.00 0.00 0.00 3.32
2853 7366 5.046231 TGCCATATCAACACACCTTACACTA 60.046 40.000 0.00 0.00 0.00 2.74
2866 7379 7.542477 CACACCTTACACTAATACTCTCAACTG 59.458 40.741 0.00 0.00 0.00 3.16
2868 7381 7.755822 CACCTTACACTAATACTCTCAACTGAC 59.244 40.741 0.00 0.00 0.00 3.51
2895 7408 8.993121 GTAGGTACCTTGTCATAATTGATGATG 58.007 37.037 22.11 0.00 46.34 3.07
2907 7420 9.457436 TCATAATTGATGATGTATGGGATGAAG 57.543 33.333 0.00 0.00 39.78 3.02
2908 7421 8.683615 CATAATTGATGATGTATGGGATGAAGG 58.316 37.037 0.00 0.00 37.82 3.46
2997 7510 0.109781 CCGCATTTTTGGTGTCTCCG 60.110 55.000 0.00 0.00 39.52 4.63
2999 7512 1.135972 CGCATTTTTGGTGTCTCCGAG 60.136 52.381 0.00 0.00 39.52 4.63
3038 7551 5.010012 GGCTGATGATCCGGTTTATGAAATT 59.990 40.000 0.00 0.00 0.00 1.82
3050 7563 6.806739 CGGTTTATGAAATTGAACCTCTTTCC 59.193 38.462 0.00 0.00 38.45 3.13
3065 7578 4.502950 CCTCTTTCCATAGATGACTCCAGC 60.503 50.000 0.00 0.00 0.00 4.85
3079 7592 4.098654 TGACTCCAGCAAGCTCTTCTATAC 59.901 45.833 0.00 0.00 0.00 1.47
3089 7602 9.487790 AGCAAGCTCTTCTATACAAGAATATTC 57.512 33.333 7.41 7.41 43.32 1.75
3090 7603 9.487790 GCAAGCTCTTCTATACAAGAATATTCT 57.512 33.333 12.37 12.37 43.32 2.40
3092 7605 9.906660 AAGCTCTTCTATACAAGAATATTCTCG 57.093 33.333 18.19 10.17 43.32 4.04
3110 7626 1.140852 TCGGATAGTGGATGCCCAAAG 59.859 52.381 0.00 0.00 45.59 2.77
3799 8318 1.921243 AGGTTTGAAGTTTTGCGTGC 58.079 45.000 0.00 0.00 0.00 5.34
3967 8486 3.593442 TTTGGAGGTGTTGGATCTTGT 57.407 42.857 0.00 0.00 0.00 3.16
4019 8538 7.078228 CGTCCACTCTTTTTAAATTGAGAAGG 58.922 38.462 18.73 17.93 0.00 3.46
4109 8628 3.053693 CCATTGAAGTGTTGAGGGGGATA 60.054 47.826 0.00 0.00 0.00 2.59
4145 8664 4.081406 ACATTATTGCACAAGAGCTTGGA 58.919 39.130 14.14 0.00 44.45 3.53
4257 8779 5.490139 ACATCACATCGAAAGCCTAATTG 57.510 39.130 0.00 0.00 0.00 2.32
4400 8922 2.765502 GGGTGGATAAAGAGAGACCCT 58.234 52.381 0.00 0.00 40.06 4.34
4584 9106 5.238583 GCTGTATGGTAGACTTTGAGTTGT 58.761 41.667 0.00 0.00 0.00 3.32
4595 9117 5.940470 AGACTTTGAGTTGTATTGTGGATCC 59.060 40.000 4.20 4.20 0.00 3.36
4756 9278 0.110688 CGTGTCTGCGTTTGGATGTG 60.111 55.000 0.00 0.00 0.00 3.21
4787 9309 1.155155 GAGGGTTGGGGAGGCAAAA 59.845 57.895 0.00 0.00 0.00 2.44
4846 9368 1.287739 TCCCAACCATCCCAGGATTTC 59.712 52.381 0.00 0.00 31.62 2.17
4852 9374 5.302823 CCAACCATCCCAGGATTTCTATTTC 59.697 44.000 0.00 0.00 31.62 2.17
4863 9385 3.462483 TTTCTATTTCTATGCGCCCGA 57.538 42.857 4.18 0.00 0.00 5.14
4880 9402 2.225963 CCCGAGTATAGCAGAAGGTACG 59.774 54.545 0.00 0.00 0.00 3.67
4930 9478 1.075482 CCCATCCCAATCATCCCCG 59.925 63.158 0.00 0.00 0.00 5.73
4931 9479 1.426251 CCCATCCCAATCATCCCCGA 61.426 60.000 0.00 0.00 0.00 5.14
4940 9488 4.160814 CCCAATCATCCCCGATTACGTATA 59.839 45.833 0.00 0.00 33.82 1.47
4976 9526 7.169982 CGAAATGATGGACTGACCTTATTACTC 59.830 40.741 0.00 0.00 39.86 2.59
5002 9552 8.063200 TCTGCATTGATTTTGATCTCTGAATT 57.937 30.769 0.00 0.00 0.00 2.17
5077 9641 1.203287 CTGATCCAGAGCGACTCACAA 59.797 52.381 9.09 0.00 32.44 3.33
5078 9642 1.827344 TGATCCAGAGCGACTCACAAT 59.173 47.619 9.09 0.51 32.06 2.71
5099 9663 1.648504 TTGCATCAGATGTGCTCTCG 58.351 50.000 12.18 0.00 42.92 4.04
5108 9672 3.068165 CAGATGTGCTCTCGGGTATGTAA 59.932 47.826 0.00 0.00 29.16 2.41
5140 9705 6.418057 TGCCTGTTATGTTTTCCATCTTTT 57.582 33.333 0.00 0.00 34.86 2.27
5141 9706 7.531857 TGCCTGTTATGTTTTCCATCTTTTA 57.468 32.000 0.00 0.00 34.86 1.52
5144 9709 9.435688 GCCTGTTATGTTTTCCATCTTTTATTT 57.564 29.630 0.00 0.00 34.86 1.40
5148 9713 9.435688 GTTATGTTTTCCATCTTTTATTTGCCT 57.564 29.630 0.00 0.00 34.86 4.75
5149 9714 7.910441 ATGTTTTCCATCTTTTATTTGCCTG 57.090 32.000 0.00 0.00 0.00 4.85
5150 9715 6.825610 TGTTTTCCATCTTTTATTTGCCTGT 58.174 32.000 0.00 0.00 0.00 4.00
5152 9717 8.424918 TGTTTTCCATCTTTTATTTGCCTGTTA 58.575 29.630 0.00 0.00 0.00 2.41
5154 9719 9.434420 TTTTCCATCTTTTATTTGCCTGTTATG 57.566 29.630 0.00 0.00 0.00 1.90
5156 9721 8.133024 TCCATCTTTTATTTGCCTGTTATGTT 57.867 30.769 0.00 0.00 0.00 2.71
5157 9722 8.592809 TCCATCTTTTATTTGCCTGTTATGTTT 58.407 29.630 0.00 0.00 0.00 2.83
5158 9723 8.658609 CCATCTTTTATTTGCCTGTTATGTTTG 58.341 33.333 0.00 0.00 0.00 2.93
5169 9759 5.733373 GCCTGTTATGTTTGCCTGCTATAAC 60.733 44.000 0.00 0.00 35.72 1.89
5241 9840 9.522804 CTAGACATAAGTATCTGACCAGAAAAC 57.477 37.037 3.62 5.91 41.36 2.43
5273 9895 2.373224 GATCTCTTTTCTGGCAAGGGG 58.627 52.381 0.00 0.00 0.00 4.79
5301 9937 9.899226 GGTGAAAGATAAGAATTATTGTATGCC 57.101 33.333 0.00 0.00 42.35 4.40
5332 9971 6.997942 AGAAGGATAGTTAGTAATGGGGAC 57.002 41.667 0.00 0.00 0.00 4.46
5334 9973 7.834046 AGAAGGATAGTTAGTAATGGGGACTA 58.166 38.462 0.00 0.00 0.00 2.59
5375 10015 2.158460 GGGAAGATTTATGGACAGGGGG 60.158 54.545 0.00 0.00 0.00 5.40
5518 10476 4.394300 GTGAAACTGCTGAGCTATCACATT 59.606 41.667 19.54 3.01 0.00 2.71
5538 10496 5.356190 ACATTGATTGCTTTCTGATCGTGAT 59.644 36.000 0.00 0.00 0.00 3.06
5552 10510 5.547465 TGATCGTGATGGTTTTAGTCTTGT 58.453 37.500 0.00 0.00 0.00 3.16
5579 10537 7.390996 GGAATGAGCAAGATTCATGTAGATGAT 59.609 37.037 3.00 0.00 38.43 2.45
5584 10542 5.944599 GCAAGATTCATGTAGATGATCCCAT 59.055 40.000 3.00 0.00 38.43 4.00
5623 10581 8.635765 TGTAAATGGCTTTTAGAGAAGAATGT 57.364 30.769 5.88 0.00 30.46 2.71
5624 10582 9.077885 TGTAAATGGCTTTTAGAGAAGAATGTT 57.922 29.630 5.88 0.00 30.46 2.71
5627 10585 6.317789 TGGCTTTTAGAGAAGAATGTTGTG 57.682 37.500 0.00 0.00 0.00 3.33
5628 10586 5.241506 TGGCTTTTAGAGAAGAATGTTGTGG 59.758 40.000 0.00 0.00 0.00 4.17
5630 10588 6.374578 GCTTTTAGAGAAGAATGTTGTGGTC 58.625 40.000 0.00 0.00 0.00 4.02
5631 10589 6.017109 GCTTTTAGAGAAGAATGTTGTGGTCA 60.017 38.462 0.00 0.00 0.00 4.02
5632 10590 7.496529 TTTTAGAGAAGAATGTTGTGGTCAG 57.503 36.000 0.00 0.00 0.00 3.51
5633 10591 3.406764 AGAGAAGAATGTTGTGGTCAGC 58.593 45.455 0.00 0.00 0.00 4.26
5634 10592 3.141398 GAGAAGAATGTTGTGGTCAGCA 58.859 45.455 0.00 0.00 38.97 4.41
5639 10597 3.928727 AATGTTGTGGTCAGCATTCAG 57.071 42.857 4.88 0.00 46.93 3.02
5641 10599 4.561979 AATGTTGTGGTCAGCATTCAGCA 61.562 43.478 4.88 0.00 46.93 4.41
5642 10600 6.577957 AATGTTGTGGTCAGCATTCAGCAC 62.578 45.833 4.88 0.00 46.93 4.40
5654 10612 5.801350 GCATTCAGCACTATTACTGTTGA 57.199 39.130 0.00 0.00 44.79 3.18
5657 10615 6.909357 GCATTCAGCACTATTACTGTTGATTC 59.091 38.462 0.00 0.00 44.79 2.52
5659 10617 7.601073 TTCAGCACTATTACTGTTGATTCAG 57.399 36.000 0.00 0.00 40.80 3.02
5661 10619 7.386059 TCAGCACTATTACTGTTGATTCAGAA 58.614 34.615 0.65 0.00 38.63 3.02
5662 10620 7.877612 TCAGCACTATTACTGTTGATTCAGAAA 59.122 33.333 0.65 0.00 38.63 2.52
5664 10622 8.671921 AGCACTATTACTGTTGATTCAGAAATG 58.328 33.333 0.65 0.00 38.63 2.32
5694 10699 9.686683 AAGATCATAGTATTTTTGTGGTTAGCT 57.313 29.630 0.00 0.00 0.00 3.32
5714 10774 6.917217 AGCTTTCAGAAATAGTATCAGCAC 57.083 37.500 0.00 0.00 0.00 4.40
5717 10777 6.314896 GCTTTCAGAAATAGTATCAGCACAGT 59.685 38.462 0.00 0.00 0.00 3.55
5727 10787 9.539825 AATAGTATCAGCACAGTTAATCTGAAG 57.460 33.333 10.71 5.52 46.27 3.02
5729 10789 2.995939 TCAGCACAGTTAATCTGAAGCG 59.004 45.455 10.71 9.91 46.27 4.68
5731 10791 2.996621 AGCACAGTTAATCTGAAGCGTC 59.003 45.455 10.71 0.00 46.27 5.19
5782 10842 4.621068 TTTATACCACACTACCTCGACG 57.379 45.455 0.00 0.00 0.00 5.12
5783 10843 0.737219 ATACCACACTACCTCGACGC 59.263 55.000 0.00 0.00 0.00 5.19
5784 10844 0.321919 TACCACACTACCTCGACGCT 60.322 55.000 0.00 0.00 0.00 5.07
5785 10845 1.177256 ACCACACTACCTCGACGCTT 61.177 55.000 0.00 0.00 0.00 4.68
5786 10846 0.456312 CCACACTACCTCGACGCTTC 60.456 60.000 0.00 0.00 0.00 3.86
5787 10847 0.240145 CACACTACCTCGACGCTTCA 59.760 55.000 0.00 0.00 0.00 3.02
5788 10848 0.522180 ACACTACCTCGACGCTTCAG 59.478 55.000 0.00 0.00 0.00 3.02
5789 10849 0.803117 CACTACCTCGACGCTTCAGA 59.197 55.000 0.00 0.00 0.00 3.27
5790 10850 1.402259 CACTACCTCGACGCTTCAGAT 59.598 52.381 0.00 0.00 0.00 2.90
5791 10851 2.093106 ACTACCTCGACGCTTCAGATT 58.907 47.619 0.00 0.00 0.00 2.40
5792 10852 3.064958 CACTACCTCGACGCTTCAGATTA 59.935 47.826 0.00 0.00 0.00 1.75
5793 10853 2.853731 ACCTCGACGCTTCAGATTAG 57.146 50.000 0.00 0.00 0.00 1.73
5794 10854 1.202313 ACCTCGACGCTTCAGATTAGC 60.202 52.381 0.00 0.00 35.29 3.09
5795 10855 1.202302 CCTCGACGCTTCAGATTAGCA 60.202 52.381 0.00 0.00 38.55 3.49
5796 10856 2.544694 CCTCGACGCTTCAGATTAGCAT 60.545 50.000 0.00 0.00 38.55 3.79
5797 10857 2.463876 TCGACGCTTCAGATTAGCATG 58.536 47.619 0.00 0.00 38.55 4.06
5798 10858 1.524355 CGACGCTTCAGATTAGCATGG 59.476 52.381 0.00 0.00 38.55 3.66
5799 10859 2.799562 CGACGCTTCAGATTAGCATGGA 60.800 50.000 0.00 0.00 38.55 3.41
5800 10860 2.799412 GACGCTTCAGATTAGCATGGAG 59.201 50.000 0.00 0.00 38.55 3.86
5801 10861 2.141517 CGCTTCAGATTAGCATGGAGG 58.858 52.381 0.00 0.00 38.55 4.30
5802 10862 2.502295 GCTTCAGATTAGCATGGAGGG 58.498 52.381 0.00 0.00 38.51 4.30
5803 10863 2.105477 GCTTCAGATTAGCATGGAGGGA 59.895 50.000 0.00 0.00 38.51 4.20
5804 10864 3.737850 CTTCAGATTAGCATGGAGGGAC 58.262 50.000 0.00 0.00 0.00 4.46
5805 10865 6.264959 GCTTCAGATTAGCATGGAGGGACT 62.265 50.000 0.00 0.00 39.25 3.85
5806 10866 3.387962 TCAGATTAGCATGGAGGGACTT 58.612 45.455 0.00 0.00 41.55 3.01
5807 10867 3.782523 TCAGATTAGCATGGAGGGACTTT 59.217 43.478 0.00 0.00 41.55 2.66
5808 10868 3.881688 CAGATTAGCATGGAGGGACTTTG 59.118 47.826 0.00 0.00 41.55 2.77
5809 10869 3.525199 AGATTAGCATGGAGGGACTTTGT 59.475 43.478 0.00 0.00 41.55 2.83
5810 10870 2.787473 TAGCATGGAGGGACTTTGTG 57.213 50.000 0.00 0.00 41.55 3.33
5811 10871 0.610232 AGCATGGAGGGACTTTGTGC 60.610 55.000 0.00 0.00 41.55 4.57
5812 10872 0.610232 GCATGGAGGGACTTTGTGCT 60.610 55.000 0.00 0.00 41.55 4.40
5813 10873 1.915141 CATGGAGGGACTTTGTGCTT 58.085 50.000 0.00 0.00 41.55 3.91
5814 10874 1.542915 CATGGAGGGACTTTGTGCTTG 59.457 52.381 0.00 0.00 41.55 4.01
5815 10875 0.843309 TGGAGGGACTTTGTGCTTGA 59.157 50.000 0.00 0.00 41.55 3.02
5816 10876 1.202806 TGGAGGGACTTTGTGCTTGAG 60.203 52.381 0.00 0.00 41.55 3.02
5817 10877 1.202818 GGAGGGACTTTGTGCTTGAGT 60.203 52.381 0.00 0.00 41.55 3.41
5818 10878 1.876156 GAGGGACTTTGTGCTTGAGTG 59.124 52.381 0.00 0.00 41.55 3.51
5819 10879 1.490490 AGGGACTTTGTGCTTGAGTGA 59.510 47.619 0.00 0.00 27.25 3.41
5820 10880 2.107204 AGGGACTTTGTGCTTGAGTGAT 59.893 45.455 0.00 0.00 27.25 3.06
5821 10881 2.227388 GGGACTTTGTGCTTGAGTGATG 59.773 50.000 0.00 0.00 0.00 3.07
5822 10882 3.141398 GGACTTTGTGCTTGAGTGATGA 58.859 45.455 0.00 0.00 0.00 2.92
5823 10883 3.565482 GGACTTTGTGCTTGAGTGATGAA 59.435 43.478 0.00 0.00 0.00 2.57
5824 10884 4.217118 GGACTTTGTGCTTGAGTGATGAAT 59.783 41.667 0.00 0.00 0.00 2.57
5825 10885 5.278660 GGACTTTGTGCTTGAGTGATGAATT 60.279 40.000 0.00 0.00 0.00 2.17
5826 10886 6.152932 ACTTTGTGCTTGAGTGATGAATTT 57.847 33.333 0.00 0.00 0.00 1.82
5827 10887 6.211515 ACTTTGTGCTTGAGTGATGAATTTC 58.788 36.000 0.00 0.00 0.00 2.17
5828 10888 5.771153 TTGTGCTTGAGTGATGAATTTCA 57.229 34.783 0.75 0.75 0.00 2.69
5829 10889 5.366829 TGTGCTTGAGTGATGAATTTCAG 57.633 39.130 5.21 0.00 0.00 3.02
5830 10890 4.216902 TGTGCTTGAGTGATGAATTTCAGG 59.783 41.667 5.21 0.00 0.00 3.86
5831 10891 3.760151 TGCTTGAGTGATGAATTTCAGGG 59.240 43.478 5.21 0.00 0.00 4.45
5832 10892 3.760684 GCTTGAGTGATGAATTTCAGGGT 59.239 43.478 5.21 0.00 0.00 4.34
5833 10893 4.943705 GCTTGAGTGATGAATTTCAGGGTA 59.056 41.667 5.21 0.00 0.00 3.69
5834 10894 5.415701 GCTTGAGTGATGAATTTCAGGGTAA 59.584 40.000 5.21 0.00 0.00 2.85
5835 10895 6.071952 GCTTGAGTGATGAATTTCAGGGTAAA 60.072 38.462 5.21 0.00 0.00 2.01
5836 10896 7.452880 TTGAGTGATGAATTTCAGGGTAAAG 57.547 36.000 5.21 0.00 0.00 1.85
5837 10897 5.945784 TGAGTGATGAATTTCAGGGTAAAGG 59.054 40.000 5.21 0.00 0.00 3.11
5838 10898 5.892348 AGTGATGAATTTCAGGGTAAAGGT 58.108 37.500 5.21 0.00 0.00 3.50
5839 10899 7.027874 AGTGATGAATTTCAGGGTAAAGGTA 57.972 36.000 5.21 0.00 0.00 3.08
5840 10900 7.112779 AGTGATGAATTTCAGGGTAAAGGTAG 58.887 38.462 5.21 0.00 0.00 3.18
5841 10901 6.318900 GTGATGAATTTCAGGGTAAAGGTAGG 59.681 42.308 5.21 0.00 0.00 3.18
5842 10902 6.216662 TGATGAATTTCAGGGTAAAGGTAGGA 59.783 38.462 5.21 0.00 0.00 2.94
5843 10903 6.457159 TGAATTTCAGGGTAAAGGTAGGAA 57.543 37.500 0.00 0.00 0.00 3.36
5844 10904 7.039722 TGAATTTCAGGGTAAAGGTAGGAAT 57.960 36.000 0.00 0.00 0.00 3.01
5845 10905 8.165267 TGAATTTCAGGGTAAAGGTAGGAATA 57.835 34.615 0.00 0.00 0.00 1.75
5846 10906 8.787818 TGAATTTCAGGGTAAAGGTAGGAATAT 58.212 33.333 0.00 0.00 0.00 1.28
5847 10907 8.996651 AATTTCAGGGTAAAGGTAGGAATATG 57.003 34.615 0.00 0.00 0.00 1.78
5848 10908 6.509523 TTCAGGGTAAAGGTAGGAATATGG 57.490 41.667 0.00 0.00 0.00 2.74
5849 10909 5.544682 TCAGGGTAAAGGTAGGAATATGGT 58.455 41.667 0.00 0.00 0.00 3.55
5850 10910 5.974370 TCAGGGTAAAGGTAGGAATATGGTT 59.026 40.000 0.00 0.00 0.00 3.67
5851 10911 6.449041 TCAGGGTAAAGGTAGGAATATGGTTT 59.551 38.462 0.00 0.00 0.00 3.27
5852 10912 6.771267 CAGGGTAAAGGTAGGAATATGGTTTC 59.229 42.308 0.00 0.00 0.00 2.78
5853 10913 6.681541 AGGGTAAAGGTAGGAATATGGTTTCT 59.318 38.462 0.00 0.00 0.00 2.52
5854 10914 6.771267 GGGTAAAGGTAGGAATATGGTTTCTG 59.229 42.308 0.00 0.00 0.00 3.02
5855 10915 6.262496 GGTAAAGGTAGGAATATGGTTTCTGC 59.738 42.308 0.00 0.00 0.00 4.26
5856 10916 5.717119 AAGGTAGGAATATGGTTTCTGCT 57.283 39.130 0.00 0.00 0.00 4.24
5857 10917 6.824958 AAGGTAGGAATATGGTTTCTGCTA 57.175 37.500 0.00 0.00 0.00 3.49
5858 10918 6.426646 AGGTAGGAATATGGTTTCTGCTAG 57.573 41.667 0.00 0.00 0.00 3.42
5859 10919 5.308237 AGGTAGGAATATGGTTTCTGCTAGG 59.692 44.000 0.00 0.00 0.00 3.02
5860 10920 4.713792 AGGAATATGGTTTCTGCTAGGG 57.286 45.455 0.00 0.00 0.00 3.53
5861 10921 4.047883 AGGAATATGGTTTCTGCTAGGGT 58.952 43.478 0.00 0.00 0.00 4.34
5862 10922 5.224441 AGGAATATGGTTTCTGCTAGGGTA 58.776 41.667 0.00 0.00 0.00 3.69
5863 10923 5.308237 AGGAATATGGTTTCTGCTAGGGTAG 59.692 44.000 0.00 0.00 0.00 3.18
5864 10924 5.071923 GGAATATGGTTTCTGCTAGGGTAGT 59.928 44.000 0.00 0.00 0.00 2.73
5865 10925 3.914426 ATGGTTTCTGCTAGGGTAGTG 57.086 47.619 0.00 0.00 0.00 2.74
5866 10926 1.906574 TGGTTTCTGCTAGGGTAGTGG 59.093 52.381 0.00 0.00 0.00 4.00
5867 10927 1.407025 GGTTTCTGCTAGGGTAGTGGC 60.407 57.143 0.00 0.00 0.00 5.01
5868 10928 1.555533 GTTTCTGCTAGGGTAGTGGCT 59.444 52.381 0.00 0.00 0.00 4.75
5869 10929 2.764572 GTTTCTGCTAGGGTAGTGGCTA 59.235 50.000 0.00 0.00 0.00 3.93
5870 10930 3.330126 TTCTGCTAGGGTAGTGGCTAT 57.670 47.619 0.00 0.00 0.00 2.97
5871 10931 3.330126 TCTGCTAGGGTAGTGGCTATT 57.670 47.619 0.00 0.00 0.00 1.73
5872 10932 4.464652 TCTGCTAGGGTAGTGGCTATTA 57.535 45.455 0.00 0.00 0.00 0.98
5873 10933 5.011982 TCTGCTAGGGTAGTGGCTATTAT 57.988 43.478 0.00 0.00 0.00 1.28
5874 10934 5.403512 TCTGCTAGGGTAGTGGCTATTATT 58.596 41.667 0.00 0.00 0.00 1.40
5875 10935 5.844516 TCTGCTAGGGTAGTGGCTATTATTT 59.155 40.000 0.00 0.00 0.00 1.40
5876 10936 5.865085 TGCTAGGGTAGTGGCTATTATTTG 58.135 41.667 0.00 0.00 0.00 2.32
5877 10937 5.221843 TGCTAGGGTAGTGGCTATTATTTGG 60.222 44.000 0.00 0.00 0.00 3.28
5878 10938 5.221864 GCTAGGGTAGTGGCTATTATTTGGT 60.222 44.000 0.00 0.00 0.00 3.67
5879 10939 5.306114 AGGGTAGTGGCTATTATTTGGTC 57.694 43.478 0.00 0.00 0.00 4.02
5880 10940 4.975794 AGGGTAGTGGCTATTATTTGGTCT 59.024 41.667 0.00 0.00 0.00 3.85
5881 10941 6.148186 AGGGTAGTGGCTATTATTTGGTCTA 58.852 40.000 0.00 0.00 0.00 2.59
5882 10942 6.792977 AGGGTAGTGGCTATTATTTGGTCTAT 59.207 38.462 0.00 0.00 0.00 1.98
5883 10943 7.959721 AGGGTAGTGGCTATTATTTGGTCTATA 59.040 37.037 0.00 0.00 0.00 1.31
5884 10944 8.769359 GGGTAGTGGCTATTATTTGGTCTATAT 58.231 37.037 0.00 0.00 0.00 0.86
5885 10945 9.601217 GGTAGTGGCTATTATTTGGTCTATATG 57.399 37.037 0.00 0.00 0.00 1.78
5886 10946 9.601217 GTAGTGGCTATTATTTGGTCTATATGG 57.399 37.037 0.00 0.00 0.00 2.74
5887 10947 8.449423 AGTGGCTATTATTTGGTCTATATGGA 57.551 34.615 0.00 0.00 0.00 3.41
5888 10948 8.890472 AGTGGCTATTATTTGGTCTATATGGAA 58.110 33.333 0.00 0.00 0.00 3.53
5889 10949 9.515226 GTGGCTATTATTTGGTCTATATGGAAA 57.485 33.333 0.00 0.00 0.00 3.13
5890 10950 9.515226 TGGCTATTATTTGGTCTATATGGAAAC 57.485 33.333 0.00 0.00 0.00 2.78
5891 10951 9.740710 GGCTATTATTTGGTCTATATGGAAACT 57.259 33.333 0.00 0.00 0.00 2.66
6041 11101 2.159379 GGCAACGGAGATGAATGTTTCC 60.159 50.000 0.00 0.00 29.10 3.13
6059 11120 3.320823 CCAAACATTTTGGGTGGGC 57.679 52.632 9.47 0.00 35.96 5.36
6060 11121 0.602372 CCAAACATTTTGGGTGGGCG 60.602 55.000 9.47 0.00 35.96 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.425448 AGAGGAAGACCCCACCTTTTG 59.575 52.381 0.00 0.00 36.73 2.44
43 44 2.261671 CGGGTGTCAAGGTCGGAG 59.738 66.667 0.00 0.00 0.00 4.63
99 100 6.248433 TCAAGCATGAGAACTCCCTTTTTAT 58.752 36.000 0.00 0.00 0.00 1.40
182 183 3.006247 GCTCTGAATGACAGGAAACTCC 58.994 50.000 0.00 0.00 45.76 3.85
183 184 3.434984 GTGCTCTGAATGACAGGAAACTC 59.565 47.826 0.00 0.00 45.76 3.01
191 192 1.456296 GCATGGTGCTCTGAATGACA 58.544 50.000 0.00 0.00 40.96 3.58
206 207 2.165030 GGGTCAGTGAATTTGAGGCATG 59.835 50.000 0.00 0.00 0.00 4.06
221 222 2.055042 AGGCAGCTAGACGGGTCAG 61.055 63.158 0.00 0.00 0.00 3.51
250 251 8.305046 AGAGCAGAATAGTAAGAAAGATGAGT 57.695 34.615 0.00 0.00 0.00 3.41
291 292 3.181434 ACCCAAGAACAGTTGGCAGAATA 60.181 43.478 0.00 0.00 45.08 1.75
293 294 1.064017 ACCCAAGAACAGTTGGCAGAA 60.064 47.619 0.00 0.00 45.08 3.02
295 296 2.270352 TACCCAAGAACAGTTGGCAG 57.730 50.000 0.00 0.00 45.08 4.85
296 297 2.969821 ATACCCAAGAACAGTTGGCA 57.030 45.000 0.00 0.00 45.08 4.92
297 298 5.163550 GGAAATATACCCAAGAACAGTTGGC 60.164 44.000 0.00 0.00 45.08 4.52
298 299 6.187682 AGGAAATATACCCAAGAACAGTTGG 58.812 40.000 0.00 0.00 45.88 3.77
301 302 6.407074 CGAGAGGAAATATACCCAAGAACAGT 60.407 42.308 0.00 0.00 0.00 3.55
302 303 5.986135 CGAGAGGAAATATACCCAAGAACAG 59.014 44.000 0.00 0.00 0.00 3.16
323 324 8.922676 TGCTACTTTAACTAGAAACAATTCGAG 58.077 33.333 0.00 0.00 42.16 4.04
395 405 5.058149 TGGATTCAATCAACACAAATCGG 57.942 39.130 0.00 0.00 0.00 4.18
462 474 7.856145 AGAGAGTAAATTGCTTGGAATACAG 57.144 36.000 0.00 0.00 0.00 2.74
514 534 1.870055 AAGGCAGCACAATGGAAGCG 61.870 55.000 0.00 0.00 0.00 4.68
548 581 4.574674 TGGATGAGATTAGCAACAAGGT 57.425 40.909 0.00 0.00 0.00 3.50
705 1033 1.413077 AGAACTTATAGCCGGGTCAGC 59.587 52.381 10.79 0.00 0.00 4.26
722 1050 8.895737 CGGCCCTGTAATAAAAACTTATAAGAA 58.104 33.333 19.38 0.00 0.00 2.52
723 1051 7.012610 GCGGCCCTGTAATAAAAACTTATAAGA 59.987 37.037 19.38 0.00 0.00 2.10
724 1052 7.136772 GCGGCCCTGTAATAAAAACTTATAAG 58.863 38.462 11.05 11.05 0.00 1.73
734 1153 0.745128 CACGGCGGCCCTGTAATAAA 60.745 55.000 14.55 0.00 0.00 1.40
762 1209 3.006940 TGGATTAAACGCTTTGCTCGAT 58.993 40.909 0.00 0.00 0.00 3.59
763 1210 2.158841 GTGGATTAAACGCTTTGCTCGA 59.841 45.455 0.00 0.00 0.00 4.04
764 1211 2.159627 AGTGGATTAAACGCTTTGCTCG 59.840 45.455 0.00 0.00 0.00 5.03
861 1912 0.469144 GGACCAAGCCCACCTTTTGA 60.469 55.000 0.00 0.00 0.00 2.69
921 4391 1.901591 ACACAATCCAAGCTCTGGTG 58.098 50.000 12.71 8.57 46.51 4.17
922 4392 2.664402 AACACAATCCAAGCTCTGGT 57.336 45.000 12.71 1.42 46.51 4.00
923 4393 3.189287 GTGTAACACAATCCAAGCTCTGG 59.811 47.826 8.22 8.22 41.62 3.86
924 4394 3.814842 TGTGTAACACAATCCAAGCTCTG 59.185 43.478 0.00 0.00 45.67 3.35
949 4419 3.313526 ACCTGCAAATCGATGAATGTAGC 59.686 43.478 14.57 6.42 0.00 3.58
1110 4584 3.499918 CGTTCATGGTCTTGAGCTCTTTT 59.500 43.478 16.19 0.00 0.00 2.27
1363 4846 3.515502 TCCTTCTTGATGTCCTTGATCGT 59.484 43.478 0.00 0.00 0.00 3.73
1479 4968 1.967066 AGCTCTGCCGCTTCTATGTAT 59.033 47.619 0.00 0.00 36.74 2.29
1542 5031 1.002274 ATCGCCCTCCAAGGAGAGT 59.998 57.895 17.57 0.00 44.53 3.24
1634 5126 7.707035 CACCTTTAATCTTCTCGTATACTGCTT 59.293 37.037 0.56 0.00 0.00 3.91
1702 5194 9.244292 GATATCCCTAAAAACCTTCTTCTTGTT 57.756 33.333 0.00 0.00 0.00 2.83
1706 5200 7.773099 AGGATATCCCTAAAAACCTTCTTCT 57.227 36.000 18.56 0.00 45.48 2.85
1741 5256 4.502962 GCAAGATCTGAGTTAGAGTTGCT 58.497 43.478 19.66 2.14 46.20 3.91
1874 5398 7.381678 GCGAGGTACTAAGGTTACAAGATATTG 59.618 40.741 0.00 0.00 41.55 1.90
1875 5399 7.432059 GCGAGGTACTAAGGTTACAAGATATT 58.568 38.462 0.00 0.00 41.55 1.28
1876 5400 6.293845 CGCGAGGTACTAAGGTTACAAGATAT 60.294 42.308 0.00 0.00 41.55 1.63
1880 5427 3.119708 ACGCGAGGTACTAAGGTTACAAG 60.120 47.826 15.93 0.00 41.55 3.16
1899 5446 0.442699 GATTCCAGACCGTTTGACGC 59.557 55.000 0.00 0.00 40.91 5.19
1922 5474 9.308318 GTTAGCAAAGGTGAACTTAATGAAAAA 57.692 29.630 0.00 0.00 38.85 1.94
1924 5488 8.001881 TGTTAGCAAAGGTGAACTTAATGAAA 57.998 30.769 0.00 0.00 38.85 2.69
1925 5489 7.575414 TGTTAGCAAAGGTGAACTTAATGAA 57.425 32.000 0.00 0.00 38.85 2.57
1927 5491 7.029563 GGATGTTAGCAAAGGTGAACTTAATG 58.970 38.462 0.00 0.00 38.85 1.90
1946 5515 5.529800 AGTTTAGTGCAAAACTACGGATGTT 59.470 36.000 13.59 0.00 45.53 2.71
2010 5615 2.495669 GGAGAGGAGGTTCAGAGACTTG 59.504 54.545 0.00 0.00 0.00 3.16
2017 5622 6.546428 TTACATAAAGGAGAGGAGGTTCAG 57.454 41.667 0.00 0.00 0.00 3.02
2065 5673 1.129251 CAGCCACTGTAACGATTGCAG 59.871 52.381 11.92 11.92 46.98 4.41
2102 6245 8.673711 CGATATGTTGAGGTGGATTTCTTAAAA 58.326 33.333 0.00 0.00 0.00 1.52
2104 6247 7.335627 ACGATATGTTGAGGTGGATTTCTTAA 58.664 34.615 0.00 0.00 0.00 1.85
2116 6259 6.423604 TGCATGTATTGTACGATATGTTGAGG 59.576 38.462 6.09 0.00 0.00 3.86
2125 6268 5.064707 GTCTTTGGTGCATGTATTGTACGAT 59.935 40.000 0.23 0.23 41.43 3.73
2126 6269 4.390603 GTCTTTGGTGCATGTATTGTACGA 59.609 41.667 0.00 0.00 41.43 3.43
2127 6270 4.153296 TGTCTTTGGTGCATGTATTGTACG 59.847 41.667 0.00 0.00 41.43 3.67
2128 6271 5.049060 TGTGTCTTTGGTGCATGTATTGTAC 60.049 40.000 0.00 0.00 39.95 2.90
2129 6272 5.066593 TGTGTCTTTGGTGCATGTATTGTA 58.933 37.500 0.00 0.00 0.00 2.41
2131 6274 4.502171 TGTGTCTTTGGTGCATGTATTG 57.498 40.909 0.00 0.00 0.00 1.90
2132 6275 5.528043 TTTGTGTCTTTGGTGCATGTATT 57.472 34.783 0.00 0.00 0.00 1.89
2133 6276 5.528043 TTTTGTGTCTTTGGTGCATGTAT 57.472 34.783 0.00 0.00 0.00 2.29
2135 6278 3.883830 TTTTGTGTCTTTGGTGCATGT 57.116 38.095 0.00 0.00 0.00 3.21
2136 6279 4.370049 TCATTTTGTGTCTTTGGTGCATG 58.630 39.130 0.00 0.00 0.00 4.06
2137 6280 4.669206 TCATTTTGTGTCTTTGGTGCAT 57.331 36.364 0.00 0.00 0.00 3.96
2138 6281 4.669206 ATCATTTTGTGTCTTTGGTGCA 57.331 36.364 0.00 0.00 0.00 4.57
2139 6282 5.119125 GCTTATCATTTTGTGTCTTTGGTGC 59.881 40.000 0.00 0.00 0.00 5.01
2140 6283 6.215121 TGCTTATCATTTTGTGTCTTTGGTG 58.785 36.000 0.00 0.00 0.00 4.17
2142 6285 7.092079 TCATGCTTATCATTTTGTGTCTTTGG 58.908 34.615 0.00 0.00 31.79 3.28
2143 6286 8.592155 CATCATGCTTATCATTTTGTGTCTTTG 58.408 33.333 0.00 0.00 31.79 2.77
2144 6287 8.308931 ACATCATGCTTATCATTTTGTGTCTTT 58.691 29.630 0.00 0.00 31.79 2.52
2146 6289 7.121611 TGACATCATGCTTATCATTTTGTGTCT 59.878 33.333 0.00 0.00 34.29 3.41
2147 6290 7.252708 TGACATCATGCTTATCATTTTGTGTC 58.747 34.615 0.00 0.00 34.05 3.67
2148 6291 7.160547 TGACATCATGCTTATCATTTTGTGT 57.839 32.000 0.00 0.00 31.47 3.72
2149 6292 8.642908 ATTGACATCATGCTTATCATTTTGTG 57.357 30.769 0.00 0.00 31.47 3.33
2150 6293 9.093970 CAATTGACATCATGCTTATCATTTTGT 57.906 29.630 0.00 0.00 33.05 2.83
2151 6294 9.093970 ACAATTGACATCATGCTTATCATTTTG 57.906 29.630 13.59 0.67 31.79 2.44
2157 6300 6.962686 TGCTACAATTGACATCATGCTTATC 58.037 36.000 13.59 0.00 0.00 1.75
2160 6303 5.648178 TTGCTACAATTGACATCATGCTT 57.352 34.783 13.59 0.00 0.00 3.91
2166 6309 9.450807 GGTGTATTATTTGCTACAATTGACATC 57.549 33.333 13.59 0.00 30.14 3.06
2169 6312 9.801873 ATTGGTGTATTATTTGCTACAATTGAC 57.198 29.630 13.59 1.65 30.14 3.18
2179 6322 6.420604 GGTGCATGTATTGGTGTATTATTTGC 59.579 38.462 0.00 0.00 0.00 3.68
2230 6373 9.196139 TGGGTTAAGAGAAAGAAAGAAATTTGA 57.804 29.630 0.00 0.00 0.00 2.69
2231 6374 9.249457 GTGGGTTAAGAGAAAGAAAGAAATTTG 57.751 33.333 0.00 0.00 0.00 2.32
2232 6375 8.421784 GGTGGGTTAAGAGAAAGAAAGAAATTT 58.578 33.333 0.00 0.00 0.00 1.82
2233 6376 7.255486 CGGTGGGTTAAGAGAAAGAAAGAAATT 60.255 37.037 0.00 0.00 0.00 1.82
2234 6377 6.206829 CGGTGGGTTAAGAGAAAGAAAGAAAT 59.793 38.462 0.00 0.00 0.00 2.17
2235 6378 5.529800 CGGTGGGTTAAGAGAAAGAAAGAAA 59.470 40.000 0.00 0.00 0.00 2.52
2246 6389 0.037605 AGAACGCGGTGGGTTAAGAG 60.038 55.000 12.47 0.00 38.76 2.85
2249 6392 2.540265 TTTAGAACGCGGTGGGTTAA 57.460 45.000 12.47 0.00 38.76 2.01
2270 6413 9.062524 TGCAAGATAAGCACTTTAAAGTCTTTA 57.937 29.630 24.86 21.13 37.08 1.85
2271 6414 7.940850 TGCAAGATAAGCACTTTAAAGTCTTT 58.059 30.769 24.86 20.14 37.08 2.52
2284 6427 1.545582 GCCTTTGGTGCAAGATAAGCA 59.454 47.619 0.00 0.00 40.19 3.91
2286 6429 3.065925 GCTAGCCTTTGGTGCAAGATAAG 59.934 47.826 2.29 0.00 0.00 1.73
2287 6430 3.016736 GCTAGCCTTTGGTGCAAGATAA 58.983 45.455 2.29 0.00 0.00 1.75
2288 6431 2.643551 GCTAGCCTTTGGTGCAAGATA 58.356 47.619 2.29 0.00 0.00 1.98
2292 6435 0.895100 CTGGCTAGCCTTTGGTGCAA 60.895 55.000 33.07 9.83 36.94 4.08
2307 6450 3.430790 GGCCATTCAGGAAAATTACTGGC 60.431 47.826 11.70 11.70 45.57 4.85
2310 6453 5.306678 TGTTTGGCCATTCAGGAAAATTACT 59.693 36.000 6.09 0.00 41.22 2.24
2311 6454 5.546526 TGTTTGGCCATTCAGGAAAATTAC 58.453 37.500 6.09 0.00 41.22 1.89
2313 6456 4.703379 TGTTTGGCCATTCAGGAAAATT 57.297 36.364 6.09 0.00 41.22 1.82
2314 6457 4.703379 TTGTTTGGCCATTCAGGAAAAT 57.297 36.364 6.09 0.00 41.22 1.82
2315 6458 4.494091 TTTGTTTGGCCATTCAGGAAAA 57.506 36.364 6.09 0.00 41.22 2.29
2317 6460 4.703379 ATTTTGTTTGGCCATTCAGGAA 57.297 36.364 6.09 8.38 41.22 3.36
2319 6462 5.771153 AAAATTTTGTTTGGCCATTCAGG 57.229 34.783 6.09 0.00 41.84 3.86
2320 6463 9.747293 AAATTAAAATTTTGTTTGGCCATTCAG 57.253 25.926 6.09 0.00 35.16 3.02
2321 6464 9.525409 CAAATTAAAATTTTGTTTGGCCATTCA 57.475 25.926 22.80 6.23 36.52 2.57
2322 6465 8.486383 GCAAATTAAAATTTTGTTTGGCCATTC 58.514 29.630 27.03 3.09 36.52 2.67
2324 6467 7.724287 AGCAAATTAAAATTTTGTTTGGCCAT 58.276 26.923 27.03 11.23 36.52 4.40
2325 6468 7.067981 AGAGCAAATTAAAATTTTGTTTGGCCA 59.932 29.630 27.03 0.00 36.52 5.36
2327 6470 8.854979 AAGAGCAAATTAAAATTTTGTTTGGC 57.145 26.923 27.03 21.45 36.52 4.52
2332 6475 9.382275 ACAGTGAAGAGCAAATTAAAATTTTGT 57.618 25.926 13.76 0.00 36.52 2.83
2333 6476 9.853921 GACAGTGAAGAGCAAATTAAAATTTTG 57.146 29.630 13.76 0.00 36.52 2.44
2334 6477 9.598517 TGACAGTGAAGAGCAAATTAAAATTTT 57.401 25.926 8.75 8.75 36.52 1.82
2335 6478 9.598517 TTGACAGTGAAGAGCAAATTAAAATTT 57.401 25.926 0.00 0.00 39.07 1.82
2338 6481 9.598517 AATTTGACAGTGAAGAGCAAATTAAAA 57.401 25.926 0.00 0.00 43.39 1.52
2341 6484 8.169977 AGAATTTGACAGTGAAGAGCAAATTA 57.830 30.769 0.00 0.00 44.48 1.40
2355 6498 9.346725 GCATAAAGGAAAAGTAGAATTTGACAG 57.653 33.333 0.00 0.00 0.00 3.51
2361 6504 8.885693 AAGAGGCATAAAGGAAAAGTAGAATT 57.114 30.769 0.00 0.00 0.00 2.17
2368 6511 5.982890 TCCAAAGAGGCATAAAGGAAAAG 57.017 39.130 0.00 0.00 37.29 2.27
2371 6514 5.393866 AGTTTCCAAAGAGGCATAAAGGAA 58.606 37.500 0.00 0.00 37.29 3.36
2372 6515 4.998051 AGTTTCCAAAGAGGCATAAAGGA 58.002 39.130 0.00 0.00 37.29 3.36
2378 6521 5.014228 AGGTAGTAAGTTTCCAAAGAGGCAT 59.986 40.000 0.00 0.00 37.29 4.40
2379 6522 4.349930 AGGTAGTAAGTTTCCAAAGAGGCA 59.650 41.667 0.00 0.00 37.29 4.75
2384 6527 7.681939 TTATGCAGGTAGTAAGTTTCCAAAG 57.318 36.000 0.00 0.00 0.00 2.77
2388 6532 7.016361 CACATTATGCAGGTAGTAAGTTTCC 57.984 40.000 0.00 0.00 0.00 3.13
2406 6840 4.578105 TGCATTATCATTCCGTGCACATTA 59.422 37.500 18.64 0.49 40.51 1.90
2410 6844 3.419264 TTGCATTATCATTCCGTGCAC 57.581 42.857 6.82 6.82 44.53 4.57
2412 6846 2.727798 GCATTGCATTATCATTCCGTGC 59.272 45.455 3.15 0.00 36.39 5.34
2417 6851 9.125906 GACTCTTATTGCATTGCATTATCATTC 57.874 33.333 12.95 1.74 38.76 2.67
2420 6854 7.040892 GGAGACTCTTATTGCATTGCATTATCA 60.041 37.037 12.95 0.00 38.76 2.15
2429 6863 4.141528 CCTCCTGGAGACTCTTATTGCATT 60.142 45.833 25.18 0.00 34.57 3.56
2437 6873 5.129650 GCTAATAAACCTCCTGGAGACTCTT 59.870 44.000 25.18 13.43 37.04 2.85
2438 6878 4.651962 GCTAATAAACCTCCTGGAGACTCT 59.348 45.833 25.18 8.75 37.04 3.24
2455 6895 6.773685 ACCAATTTACTAAATGGCCGCTAATA 59.226 34.615 0.00 0.00 0.00 0.98
2468 6908 3.201266 AGATCGGCCCACCAATTTACTAA 59.799 43.478 0.00 0.00 34.57 2.24
2486 6926 3.236896 TGGAAAGACCCGGGTATAGATC 58.763 50.000 30.38 21.56 38.00 2.75
2508 6948 8.848474 ATATTACAATGGTTAGGTGCATCTAC 57.152 34.615 6.09 2.18 0.00 2.59
2514 6954 9.816354 ATTTCAAATATTACAATGGTTAGGTGC 57.184 29.630 0.00 0.00 0.00 5.01
2543 7029 5.468746 TGAAAGACGAGTACCAATTTGGAAG 59.531 40.000 22.19 9.86 40.96 3.46
2546 7032 5.682943 TTGAAAGACGAGTACCAATTTGG 57.317 39.130 14.02 14.02 45.02 3.28
2549 7035 9.099454 GATCTATTTGAAAGACGAGTACCAATT 57.901 33.333 0.00 0.00 0.00 2.32
2550 7036 8.478877 AGATCTATTTGAAAGACGAGTACCAAT 58.521 33.333 0.00 0.00 0.00 3.16
2551 7037 7.837863 AGATCTATTTGAAAGACGAGTACCAA 58.162 34.615 0.00 0.00 0.00 3.67
2553 7039 7.861872 GGTAGATCTATTTGAAAGACGAGTACC 59.138 40.741 5.57 0.00 0.00 3.34
2554 7040 8.623030 AGGTAGATCTATTTGAAAGACGAGTAC 58.377 37.037 5.57 0.00 0.00 2.73
2555 7041 8.749026 AGGTAGATCTATTTGAAAGACGAGTA 57.251 34.615 5.57 0.00 0.00 2.59
2560 7046 9.968870 ACGATTAGGTAGATCTATTTGAAAGAC 57.031 33.333 5.57 0.00 0.00 3.01
2602 7110 5.139435 TCGATGGCCATACATAGAAGAAG 57.861 43.478 20.84 0.00 31.04 2.85
2604 7112 5.019470 AGATCGATGGCCATACATAGAAGA 58.981 41.667 20.84 8.46 36.35 2.87
2618 7126 8.840321 ACAAATAGAAAATTGGTAGATCGATGG 58.160 33.333 0.54 0.00 0.00 3.51
2687 7196 6.052360 TGCGTTATGAACTGCCAATTAGATA 58.948 36.000 0.00 0.00 32.57 1.98
2692 7201 3.772932 CATGCGTTATGAACTGCCAATT 58.227 40.909 0.00 0.00 39.21 2.32
2708 7217 7.149015 GCAATATGATCTTTTAAGAAGCATGCG 60.149 37.037 13.01 0.00 38.77 4.73
2718 7227 8.765488 TGAATCTGGGCAATATGATCTTTTAA 57.235 30.769 0.00 0.00 0.00 1.52
2720 7229 7.850935 ATGAATCTGGGCAATATGATCTTTT 57.149 32.000 0.00 0.00 0.00 2.27
2724 7233 5.877012 ACGTATGAATCTGGGCAATATGATC 59.123 40.000 0.00 0.00 0.00 2.92
2734 7243 2.315925 AGCACACGTATGAATCTGGG 57.684 50.000 0.00 0.00 0.00 4.45
2736 7245 7.700322 AATAAGTAGCACACGTATGAATCTG 57.300 36.000 0.00 0.00 32.88 2.90
2742 7251 8.181487 ACAAACTAATAAGTAGCACACGTATG 57.819 34.615 0.00 0.00 33.75 2.39
2744 7253 8.489559 CAAACAAACTAATAAGTAGCACACGTA 58.510 33.333 0.00 0.00 33.75 3.57
2749 7258 9.166126 GTTCACAAACAAACTAATAAGTAGCAC 57.834 33.333 0.00 0.00 33.20 4.40
2770 7279 4.095334 TGCATCTAGATTGTGCATGTTCAC 59.905 41.667 14.12 0.00 43.30 3.18
2780 7289 6.239217 TGTGGAACTATGCATCTAGATTGT 57.761 37.500 0.19 0.00 38.04 2.71
2821 7333 5.276270 GTGTGTTGATATGGCAAAGCTATG 58.724 41.667 0.00 0.00 31.02 2.23
2823 7335 3.694072 GGTGTGTTGATATGGCAAAGCTA 59.306 43.478 0.00 0.00 0.00 3.32
2831 7344 9.042008 GTATTAGTGTAAGGTGTGTTGATATGG 57.958 37.037 0.00 0.00 0.00 2.74
2832 7345 9.817809 AGTATTAGTGTAAGGTGTGTTGATATG 57.182 33.333 0.00 0.00 0.00 1.78
2837 7350 7.375834 TGAGAGTATTAGTGTAAGGTGTGTTG 58.624 38.462 0.00 0.00 0.00 3.33
2838 7351 7.534723 TGAGAGTATTAGTGTAAGGTGTGTT 57.465 36.000 0.00 0.00 0.00 3.32
2842 7355 7.755822 GTCAGTTGAGAGTATTAGTGTAAGGTG 59.244 40.741 0.00 0.00 0.00 4.00
2853 7366 5.356470 GGTACCTACGTCAGTTGAGAGTATT 59.644 44.000 4.06 0.00 0.00 1.89
2866 7379 6.567050 TCAATTATGACAAGGTACCTACGTC 58.433 40.000 26.71 26.71 32.49 4.34
2868 7381 7.207383 TCATCAATTATGACAAGGTACCTACG 58.793 38.462 16.67 12.30 39.77 3.51
2895 7408 3.963129 TCCACAAACCTTCATCCCATAC 58.037 45.455 0.00 0.00 0.00 2.39
2907 7420 3.636764 AGGTTGATGTCTTTCCACAAACC 59.363 43.478 0.00 0.00 35.13 3.27
2908 7421 4.918810 AGGTTGATGTCTTTCCACAAAC 57.081 40.909 0.00 0.00 0.00 2.93
2971 7484 1.115467 ACCAAAAATGCGGGTTGTGA 58.885 45.000 0.00 0.00 0.00 3.58
2997 7510 0.654683 GCCGATGAGCAACATGACTC 59.345 55.000 0.00 3.92 39.56 3.36
2999 7512 0.376152 CAGCCGATGAGCAACATGAC 59.624 55.000 0.00 0.00 39.56 3.06
3024 7537 5.897377 AGAGGTTCAATTTCATAAACCGG 57.103 39.130 0.00 0.00 44.69 5.28
3038 7551 5.129485 GGAGTCATCTATGGAAAGAGGTTCA 59.871 44.000 0.00 0.00 38.06 3.18
3050 7563 3.069872 AGAGCTTGCTGGAGTCATCTATG 59.930 47.826 0.00 0.00 0.00 2.23
3079 7592 6.312426 GCATCCACTATCCGAGAATATTCTTG 59.688 42.308 21.59 21.59 37.73 3.02
3089 7602 0.758734 TTGGGCATCCACTATCCGAG 59.241 55.000 0.00 0.00 43.94 4.63
3090 7603 1.140852 CTTTGGGCATCCACTATCCGA 59.859 52.381 0.00 0.00 43.94 4.55
3092 7605 1.494721 TCCTTTGGGCATCCACTATCC 59.505 52.381 0.00 0.00 43.94 2.59
3799 8318 4.084013 GGTTACAGTCCGACAAATCAAGTG 60.084 45.833 0.40 0.00 0.00 3.16
3967 8486 9.224267 GCAATTCATCTAGCTCATAATTCCTTA 57.776 33.333 0.00 0.00 0.00 2.69
4040 8559 5.045797 AGGAGTTGGAACCACCTTATAGAAC 60.046 44.000 0.00 0.00 39.86 3.01
4109 8628 6.094603 GTGCAATAATGTTCAGAGAGACCAAT 59.905 38.462 0.00 0.00 0.00 3.16
4145 8664 0.329596 CCCTCAGCCTTGCTAGGTTT 59.670 55.000 15.85 1.96 44.00 3.27
4257 8779 6.072112 TGTTTCTCCAGAATTGCAACTAAC 57.928 37.500 0.00 0.00 33.54 2.34
4400 8922 1.402259 GAGAGGTTCGAGAGATGCGAA 59.598 52.381 0.00 0.00 44.48 4.70
4486 9008 0.961358 CCAGAGACGTCGAAGGGACT 60.961 60.000 10.46 0.00 43.79 3.85
4584 9106 0.391793 TGCGTTGCGGATCCACAATA 60.392 50.000 17.87 5.84 0.00 1.90
4595 9117 3.116063 TCAAACATTATCTGCGTTGCG 57.884 42.857 0.00 0.00 0.00 4.85
4668 9190 2.421529 GGTTACCATCCTCTTTCGCCAT 60.422 50.000 0.00 0.00 0.00 4.40
4756 9278 2.358737 CCCTCGCTCCACCACAAC 60.359 66.667 0.00 0.00 0.00 3.32
4820 9342 2.689175 GGATGGTTGGGATGGGCA 59.311 61.111 0.00 0.00 0.00 5.36
4846 9368 2.440539 ACTCGGGCGCATAGAAATAG 57.559 50.000 10.83 0.00 0.00 1.73
4852 9374 0.526211 TGCTATACTCGGGCGCATAG 59.474 55.000 10.83 7.80 0.00 2.23
4863 9385 3.553096 GCATGCGTACCTTCTGCTATACT 60.553 47.826 0.00 0.00 0.00 2.12
4951 9501 8.207545 AGAGTAATAAGGTCAGTCCATCATTTC 58.792 37.037 0.00 0.00 39.02 2.17
4958 9508 4.402793 GCAGAGAGTAATAAGGTCAGTCCA 59.597 45.833 0.00 0.00 39.02 4.02
4976 9526 6.679327 TCAGAGATCAAAATCAATGCAGAG 57.321 37.500 0.00 0.00 34.07 3.35
5002 9552 4.122046 CGTCATCATGAGCATCTTGGTAA 58.878 43.478 0.09 0.00 40.36 2.85
5077 9641 3.995048 CGAGAGCACATCTGATGCAATAT 59.005 43.478 17.24 0.85 45.92 1.28
5078 9642 3.387397 CGAGAGCACATCTGATGCAATA 58.613 45.455 17.24 0.00 45.92 1.90
5099 9663 6.062095 ACAGGCAAATATCTGTTACATACCC 58.938 40.000 0.00 0.00 40.91 3.69
5108 9672 7.178274 TGGAAAACATAACAGGCAAATATCTGT 59.822 33.333 0.00 0.00 45.06 3.41
5140 9705 4.620332 GCAGGCAAACATAACAGGCAAATA 60.620 41.667 0.00 0.00 0.00 1.40
5141 9706 3.865684 GCAGGCAAACATAACAGGCAAAT 60.866 43.478 0.00 0.00 0.00 2.32
5144 9709 0.602562 GCAGGCAAACATAACAGGCA 59.397 50.000 0.00 0.00 0.00 4.75
5145 9710 0.890683 AGCAGGCAAACATAACAGGC 59.109 50.000 0.00 0.00 0.00 4.85
5148 9713 4.334203 CCGTTATAGCAGGCAAACATAACA 59.666 41.667 13.44 0.00 33.61 2.41
5149 9714 4.844267 CCGTTATAGCAGGCAAACATAAC 58.156 43.478 0.00 1.97 0.00 1.89
5169 9759 5.584649 TCTGTTTCTAATTTCCATACAGCCG 59.415 40.000 0.00 0.00 33.40 5.52
5241 9840 2.393271 AAGAGATCGGGCAAGTTCAG 57.607 50.000 0.00 0.00 0.00 3.02
5332 9971 6.787957 TCCCAAAATCTAGTTCTATCCCCTAG 59.212 42.308 0.00 0.00 0.00 3.02
5334 9973 5.548573 TCCCAAAATCTAGTTCTATCCCCT 58.451 41.667 0.00 0.00 0.00 4.79
5375 10015 4.814771 AGTACTTGTCACCTAAAACAGCAC 59.185 41.667 0.00 0.00 0.00 4.40
5518 10476 3.624410 CCATCACGATCAGAAAGCAATCA 59.376 43.478 0.00 0.00 0.00 2.57
5527 10485 5.661056 AGACTAAAACCATCACGATCAGA 57.339 39.130 0.00 0.00 0.00 3.27
5538 10496 4.518970 GCTCATTCCACAAGACTAAAACCA 59.481 41.667 0.00 0.00 0.00 3.67
5552 10510 5.993055 TCTACATGAATCTTGCTCATTCCA 58.007 37.500 0.00 0.00 30.99 3.53
5592 10550 7.391148 TCTCTAAAAGCCATTTACATTCACC 57.609 36.000 0.00 0.00 32.27 4.02
5593 10551 8.730680 TCTTCTCTAAAAGCCATTTACATTCAC 58.269 33.333 0.00 0.00 32.27 3.18
5594 10552 8.862325 TCTTCTCTAAAAGCCATTTACATTCA 57.138 30.769 0.00 0.00 32.27 2.57
5597 10555 9.247861 ACATTCTTCTCTAAAAGCCATTTACAT 57.752 29.630 0.00 0.00 32.27 2.29
5598 10556 8.635765 ACATTCTTCTCTAAAAGCCATTTACA 57.364 30.769 0.00 0.00 32.27 2.41
5599 10557 9.346725 CAACATTCTTCTCTAAAAGCCATTTAC 57.653 33.333 0.00 0.00 32.27 2.01
5600 10558 9.077885 ACAACATTCTTCTCTAAAAGCCATTTA 57.922 29.630 0.00 0.00 32.27 1.40
5601 10559 7.869429 CACAACATTCTTCTCTAAAAGCCATTT 59.131 33.333 0.00 0.00 34.92 2.32
5623 10581 0.953727 GTGCTGAATGCTGACCACAA 59.046 50.000 0.00 0.00 43.37 3.33
5624 10582 0.109153 AGTGCTGAATGCTGACCACA 59.891 50.000 0.00 0.00 43.37 4.17
5627 10585 4.272018 CAGTAATAGTGCTGAATGCTGACC 59.728 45.833 1.72 0.00 39.68 4.02
5628 10586 4.872691 ACAGTAATAGTGCTGAATGCTGAC 59.127 41.667 15.29 0.00 39.68 3.51
5630 10588 5.352293 TCAACAGTAATAGTGCTGAATGCTG 59.648 40.000 15.29 4.52 39.68 4.41
5631 10589 5.491070 TCAACAGTAATAGTGCTGAATGCT 58.509 37.500 15.29 0.00 39.68 3.79
5632 10590 5.801350 TCAACAGTAATAGTGCTGAATGC 57.199 39.130 15.29 0.00 39.68 3.56
5633 10591 7.977904 TGAATCAACAGTAATAGTGCTGAATG 58.022 34.615 15.29 12.50 39.68 2.67
5634 10592 8.043113 TCTGAATCAACAGTAATAGTGCTGAAT 58.957 33.333 15.29 3.06 39.68 2.57
5636 10594 6.935167 TCTGAATCAACAGTAATAGTGCTGA 58.065 36.000 15.29 3.96 39.68 4.26
5639 10597 8.668353 TCATTTCTGAATCAACAGTAATAGTGC 58.332 33.333 0.00 0.00 36.35 4.40
5641 10599 8.887717 GCTCATTTCTGAATCAACAGTAATAGT 58.112 33.333 0.00 0.00 36.35 2.12
5642 10600 8.886719 TGCTCATTTCTGAATCAACAGTAATAG 58.113 33.333 0.00 0.00 36.35 1.73
5643 10601 8.791327 TGCTCATTTCTGAATCAACAGTAATA 57.209 30.769 0.00 0.00 36.35 0.98
5644 10602 7.692460 TGCTCATTTCTGAATCAACAGTAAT 57.308 32.000 0.00 0.00 38.01 1.89
5645 10603 7.445096 TCTTGCTCATTTCTGAATCAACAGTAA 59.555 33.333 0.00 0.00 38.79 2.24
5647 10605 5.766670 TCTTGCTCATTTCTGAATCAACAGT 59.233 36.000 0.00 0.00 38.79 3.55
5648 10606 6.250344 TCTTGCTCATTTCTGAATCAACAG 57.750 37.500 0.00 0.00 39.02 3.16
5649 10607 6.431852 TGATCTTGCTCATTTCTGAATCAACA 59.568 34.615 0.00 0.00 0.00 3.33
5650 10608 6.849502 TGATCTTGCTCATTTCTGAATCAAC 58.150 36.000 0.00 0.00 0.00 3.18
5651 10609 7.640597 ATGATCTTGCTCATTTCTGAATCAA 57.359 32.000 0.00 0.00 31.82 2.57
5652 10610 7.991460 ACTATGATCTTGCTCATTTCTGAATCA 59.009 33.333 0.00 0.00 37.13 2.57
5653 10611 8.380743 ACTATGATCTTGCTCATTTCTGAATC 57.619 34.615 0.00 0.00 37.13 2.52
5662 10620 8.627403 CCACAAAAATACTATGATCTTGCTCAT 58.373 33.333 0.00 0.00 39.22 2.90
5664 10622 7.989826 ACCACAAAAATACTATGATCTTGCTC 58.010 34.615 0.00 0.00 0.00 4.26
5666 10624 9.722056 CTAACCACAAAAATACTATGATCTTGC 57.278 33.333 0.00 0.00 0.00 4.01
5694 10699 9.719355 TTAACTGTGCTGATACTATTTCTGAAA 57.281 29.630 5.15 5.15 0.00 2.69
5714 10774 2.854777 CCTCGACGCTTCAGATTAACTG 59.145 50.000 0.00 0.00 46.97 3.16
5717 10777 3.693085 ACTACCTCGACGCTTCAGATTAA 59.307 43.478 0.00 0.00 0.00 1.40
5727 10787 0.737219 ATACCACACTACCTCGACGC 59.263 55.000 0.00 0.00 0.00 5.19
5729 10789 3.813443 TCCTATACCACACTACCTCGAC 58.187 50.000 0.00 0.00 0.00 4.20
5731 10791 4.643784 ACTTTCCTATACCACACTACCTCG 59.356 45.833 0.00 0.00 0.00 4.63
5764 10824 0.737219 GCGTCGAGGTAGTGTGGTAT 59.263 55.000 7.01 0.00 0.00 2.73
5765 10825 0.321919 AGCGTCGAGGTAGTGTGGTA 60.322 55.000 7.01 0.00 0.00 3.25
5766 10826 1.177256 AAGCGTCGAGGTAGTGTGGT 61.177 55.000 7.01 0.00 0.00 4.16
5767 10827 0.456312 GAAGCGTCGAGGTAGTGTGG 60.456 60.000 7.01 0.00 0.00 4.17
5768 10828 0.240145 TGAAGCGTCGAGGTAGTGTG 59.760 55.000 7.01 0.00 0.00 3.82
5769 10829 0.522180 CTGAAGCGTCGAGGTAGTGT 59.478 55.000 7.01 0.00 0.00 3.55
5770 10830 0.803117 TCTGAAGCGTCGAGGTAGTG 59.197 55.000 7.01 0.00 0.00 2.74
5771 10831 1.752683 ATCTGAAGCGTCGAGGTAGT 58.247 50.000 7.01 0.00 0.00 2.73
5772 10832 2.853731 AATCTGAAGCGTCGAGGTAG 57.146 50.000 7.01 1.46 0.00 3.18
5773 10833 2.033049 GCTAATCTGAAGCGTCGAGGTA 59.967 50.000 7.01 0.00 0.00 3.08
5774 10834 1.202313 GCTAATCTGAAGCGTCGAGGT 60.202 52.381 7.01 0.00 0.00 3.85
5775 10835 1.202302 TGCTAATCTGAAGCGTCGAGG 60.202 52.381 0.00 0.00 43.11 4.63
5776 10836 2.194800 TGCTAATCTGAAGCGTCGAG 57.805 50.000 0.00 0.00 43.11 4.04
5777 10837 2.463876 CATGCTAATCTGAAGCGTCGA 58.536 47.619 0.00 0.00 43.11 4.20
5778 10838 1.524355 CCATGCTAATCTGAAGCGTCG 59.476 52.381 0.00 0.00 43.11 5.12
5779 10839 2.799412 CTCCATGCTAATCTGAAGCGTC 59.201 50.000 0.00 0.00 43.11 5.19
5780 10840 2.484417 CCTCCATGCTAATCTGAAGCGT 60.484 50.000 0.00 0.00 43.11 5.07
5781 10841 2.141517 CCTCCATGCTAATCTGAAGCG 58.858 52.381 0.00 0.00 43.11 4.68
5782 10842 2.105477 TCCCTCCATGCTAATCTGAAGC 59.895 50.000 0.00 0.00 40.50 3.86
5783 10843 3.390639 AGTCCCTCCATGCTAATCTGAAG 59.609 47.826 0.00 0.00 0.00 3.02
5784 10844 3.387962 AGTCCCTCCATGCTAATCTGAA 58.612 45.455 0.00 0.00 0.00 3.02
5785 10845 3.051940 AGTCCCTCCATGCTAATCTGA 57.948 47.619 0.00 0.00 0.00 3.27
5786 10846 3.853355 AAGTCCCTCCATGCTAATCTG 57.147 47.619 0.00 0.00 0.00 2.90
5787 10847 3.525199 ACAAAGTCCCTCCATGCTAATCT 59.475 43.478 0.00 0.00 0.00 2.40
5788 10848 3.629398 CACAAAGTCCCTCCATGCTAATC 59.371 47.826 0.00 0.00 0.00 1.75
5789 10849 3.624777 CACAAAGTCCCTCCATGCTAAT 58.375 45.455 0.00 0.00 0.00 1.73
5790 10850 2.879756 GCACAAAGTCCCTCCATGCTAA 60.880 50.000 0.00 0.00 0.00 3.09
5791 10851 1.340017 GCACAAAGTCCCTCCATGCTA 60.340 52.381 0.00 0.00 0.00 3.49
5792 10852 0.610232 GCACAAAGTCCCTCCATGCT 60.610 55.000 0.00 0.00 0.00 3.79
5793 10853 0.610232 AGCACAAAGTCCCTCCATGC 60.610 55.000 0.00 0.00 0.00 4.06
5794 10854 1.542915 CAAGCACAAAGTCCCTCCATG 59.457 52.381 0.00 0.00 0.00 3.66
5795 10855 1.425066 TCAAGCACAAAGTCCCTCCAT 59.575 47.619 0.00 0.00 0.00 3.41
5796 10856 0.843309 TCAAGCACAAAGTCCCTCCA 59.157 50.000 0.00 0.00 0.00 3.86
5797 10857 1.202818 ACTCAAGCACAAAGTCCCTCC 60.203 52.381 0.00 0.00 0.00 4.30
5798 10858 1.876156 CACTCAAGCACAAAGTCCCTC 59.124 52.381 0.00 0.00 0.00 4.30
5799 10859 1.490490 TCACTCAAGCACAAAGTCCCT 59.510 47.619 0.00 0.00 0.00 4.20
5800 10860 1.967319 TCACTCAAGCACAAAGTCCC 58.033 50.000 0.00 0.00 0.00 4.46
5801 10861 3.141398 TCATCACTCAAGCACAAAGTCC 58.859 45.455 0.00 0.00 0.00 3.85
5802 10862 4.818534 TTCATCACTCAAGCACAAAGTC 57.181 40.909 0.00 0.00 0.00 3.01
5803 10863 5.779529 AATTCATCACTCAAGCACAAAGT 57.220 34.783 0.00 0.00 0.00 2.66
5804 10864 6.210796 TGAAATTCATCACTCAAGCACAAAG 58.789 36.000 0.00 0.00 0.00 2.77
5805 10865 6.146601 TGAAATTCATCACTCAAGCACAAA 57.853 33.333 0.00 0.00 0.00 2.83
5806 10866 5.278610 CCTGAAATTCATCACTCAAGCACAA 60.279 40.000 0.00 0.00 0.00 3.33
5807 10867 4.216902 CCTGAAATTCATCACTCAAGCACA 59.783 41.667 0.00 0.00 0.00 4.57
5808 10868 4.380233 CCCTGAAATTCATCACTCAAGCAC 60.380 45.833 0.00 0.00 0.00 4.40
5809 10869 3.760151 CCCTGAAATTCATCACTCAAGCA 59.240 43.478 0.00 0.00 0.00 3.91
5810 10870 3.760684 ACCCTGAAATTCATCACTCAAGC 59.239 43.478 0.00 0.00 0.00 4.01
5811 10871 7.362401 CCTTTACCCTGAAATTCATCACTCAAG 60.362 40.741 0.00 0.00 0.00 3.02
5812 10872 6.434028 CCTTTACCCTGAAATTCATCACTCAA 59.566 38.462 0.00 0.00 0.00 3.02
5813 10873 5.945784 CCTTTACCCTGAAATTCATCACTCA 59.054 40.000 0.00 0.00 0.00 3.41
5814 10874 5.946377 ACCTTTACCCTGAAATTCATCACTC 59.054 40.000 0.00 0.00 0.00 3.51
5815 10875 5.892348 ACCTTTACCCTGAAATTCATCACT 58.108 37.500 0.00 0.00 0.00 3.41
5816 10876 6.318900 CCTACCTTTACCCTGAAATTCATCAC 59.681 42.308 0.00 0.00 0.00 3.06
5817 10877 6.216662 TCCTACCTTTACCCTGAAATTCATCA 59.783 38.462 0.00 0.00 0.00 3.07
5818 10878 6.659824 TCCTACCTTTACCCTGAAATTCATC 58.340 40.000 0.00 0.00 0.00 2.92
5819 10879 6.652205 TCCTACCTTTACCCTGAAATTCAT 57.348 37.500 0.00 0.00 0.00 2.57
5820 10880 6.457159 TTCCTACCTTTACCCTGAAATTCA 57.543 37.500 0.00 0.00 0.00 2.57
5821 10881 9.067986 CATATTCCTACCTTTACCCTGAAATTC 57.932 37.037 0.00 0.00 0.00 2.17
5822 10882 8.004801 CCATATTCCTACCTTTACCCTGAAATT 58.995 37.037 0.00 0.00 0.00 1.82
5823 10883 7.130442 ACCATATTCCTACCTTTACCCTGAAAT 59.870 37.037 0.00 0.00 0.00 2.17
5824 10884 6.449041 ACCATATTCCTACCTTTACCCTGAAA 59.551 38.462 0.00 0.00 0.00 2.69
5825 10885 5.974370 ACCATATTCCTACCTTTACCCTGAA 59.026 40.000 0.00 0.00 0.00 3.02
5826 10886 5.544682 ACCATATTCCTACCTTTACCCTGA 58.455 41.667 0.00 0.00 0.00 3.86
5827 10887 5.906772 ACCATATTCCTACCTTTACCCTG 57.093 43.478 0.00 0.00 0.00 4.45
5828 10888 6.681541 AGAAACCATATTCCTACCTTTACCCT 59.318 38.462 0.00 0.00 0.00 4.34
5829 10889 6.771267 CAGAAACCATATTCCTACCTTTACCC 59.229 42.308 0.00 0.00 0.00 3.69
5830 10890 6.262496 GCAGAAACCATATTCCTACCTTTACC 59.738 42.308 0.00 0.00 0.00 2.85
5831 10891 7.054751 AGCAGAAACCATATTCCTACCTTTAC 58.945 38.462 0.00 0.00 0.00 2.01
5832 10892 7.208064 AGCAGAAACCATATTCCTACCTTTA 57.792 36.000 0.00 0.00 0.00 1.85
5833 10893 6.079712 AGCAGAAACCATATTCCTACCTTT 57.920 37.500 0.00 0.00 0.00 3.11
5834 10894 5.717119 AGCAGAAACCATATTCCTACCTT 57.283 39.130 0.00 0.00 0.00 3.50
5835 10895 5.308237 CCTAGCAGAAACCATATTCCTACCT 59.692 44.000 0.00 0.00 0.00 3.08
5836 10896 5.513267 CCCTAGCAGAAACCATATTCCTACC 60.513 48.000 0.00 0.00 0.00 3.18
5837 10897 5.071923 ACCCTAGCAGAAACCATATTCCTAC 59.928 44.000 0.00 0.00 0.00 3.18
5838 10898 5.224441 ACCCTAGCAGAAACCATATTCCTA 58.776 41.667 0.00 0.00 0.00 2.94
5839 10899 4.047883 ACCCTAGCAGAAACCATATTCCT 58.952 43.478 0.00 0.00 0.00 3.36
5840 10900 4.439253 ACCCTAGCAGAAACCATATTCC 57.561 45.455 0.00 0.00 0.00 3.01
5841 10901 5.992217 CACTACCCTAGCAGAAACCATATTC 59.008 44.000 0.00 0.00 0.00 1.75
5842 10902 5.163195 CCACTACCCTAGCAGAAACCATATT 60.163 44.000 0.00 0.00 0.00 1.28
5843 10903 4.348168 CCACTACCCTAGCAGAAACCATAT 59.652 45.833 0.00 0.00 0.00 1.78
5844 10904 3.709653 CCACTACCCTAGCAGAAACCATA 59.290 47.826 0.00 0.00 0.00 2.74
5845 10905 2.505819 CCACTACCCTAGCAGAAACCAT 59.494 50.000 0.00 0.00 0.00 3.55
5846 10906 1.906574 CCACTACCCTAGCAGAAACCA 59.093 52.381 0.00 0.00 0.00 3.67
5847 10907 1.407025 GCCACTACCCTAGCAGAAACC 60.407 57.143 0.00 0.00 0.00 3.27
5848 10908 1.555533 AGCCACTACCCTAGCAGAAAC 59.444 52.381 0.00 0.00 0.00 2.78
5849 10909 1.952621 AGCCACTACCCTAGCAGAAA 58.047 50.000 0.00 0.00 0.00 2.52
5850 10910 2.840640 TAGCCACTACCCTAGCAGAA 57.159 50.000 0.00 0.00 0.00 3.02
5851 10911 3.330126 AATAGCCACTACCCTAGCAGA 57.670 47.619 0.00 0.00 0.00 4.26
5852 10912 5.746990 AATAATAGCCACTACCCTAGCAG 57.253 43.478 0.00 0.00 0.00 4.24
5853 10913 5.221843 CCAAATAATAGCCACTACCCTAGCA 60.222 44.000 0.00 0.00 0.00 3.49
5854 10914 5.221864 ACCAAATAATAGCCACTACCCTAGC 60.222 44.000 0.00 0.00 0.00 3.42
5855 10915 6.270231 AGACCAAATAATAGCCACTACCCTAG 59.730 42.308 0.00 0.00 0.00 3.02
5856 10916 6.148186 AGACCAAATAATAGCCACTACCCTA 58.852 40.000 0.00 0.00 0.00 3.53
5857 10917 4.975794 AGACCAAATAATAGCCACTACCCT 59.024 41.667 0.00 0.00 0.00 4.34
5858 10918 5.306114 AGACCAAATAATAGCCACTACCC 57.694 43.478 0.00 0.00 0.00 3.69
5859 10919 9.601217 CATATAGACCAAATAATAGCCACTACC 57.399 37.037 0.00 0.00 0.00 3.18
5860 10920 9.601217 CCATATAGACCAAATAATAGCCACTAC 57.399 37.037 0.00 0.00 0.00 2.73
5861 10921 9.555411 TCCATATAGACCAAATAATAGCCACTA 57.445 33.333 0.00 0.00 0.00 2.74
5862 10922 8.449423 TCCATATAGACCAAATAATAGCCACT 57.551 34.615 0.00 0.00 0.00 4.00
5863 10923 9.515226 TTTCCATATAGACCAAATAATAGCCAC 57.485 33.333 0.00 0.00 0.00 5.01
5864 10924 9.515226 GTTTCCATATAGACCAAATAATAGCCA 57.485 33.333 0.00 0.00 0.00 4.75
5865 10925 9.740710 AGTTTCCATATAGACCAAATAATAGCC 57.259 33.333 0.00 0.00 0.00 3.93
5869 10929 9.799106 CCTCAGTTTCCATATAGACCAAATAAT 57.201 33.333 0.00 0.00 0.00 1.28
5870 10930 8.998814 TCCTCAGTTTCCATATAGACCAAATAA 58.001 33.333 0.00 0.00 0.00 1.40
5871 10931 8.561536 TCCTCAGTTTCCATATAGACCAAATA 57.438 34.615 0.00 0.00 0.00 1.40
5872 10932 7.451731 TCCTCAGTTTCCATATAGACCAAAT 57.548 36.000 0.00 0.00 0.00 2.32
5873 10933 6.884472 TCCTCAGTTTCCATATAGACCAAA 57.116 37.500 0.00 0.00 0.00 3.28
5874 10934 6.884472 TTCCTCAGTTTCCATATAGACCAA 57.116 37.500 0.00 0.00 0.00 3.67
5875 10935 6.615316 TGATTCCTCAGTTTCCATATAGACCA 59.385 38.462 0.00 0.00 0.00 4.02
5876 10936 7.067496 TGATTCCTCAGTTTCCATATAGACC 57.933 40.000 0.00 0.00 0.00 3.85
5881 10941 8.800332 GCAATTATGATTCCTCAGTTTCCATAT 58.200 33.333 0.00 0.00 34.12 1.78
5882 10942 8.000709 AGCAATTATGATTCCTCAGTTTCCATA 58.999 33.333 0.00 0.00 34.12 2.74
5883 10943 6.837568 AGCAATTATGATTCCTCAGTTTCCAT 59.162 34.615 0.00 0.00 34.12 3.41
5884 10944 6.189859 AGCAATTATGATTCCTCAGTTTCCA 58.810 36.000 0.00 0.00 34.12 3.53
5885 10945 6.705863 AGCAATTATGATTCCTCAGTTTCC 57.294 37.500 0.00 0.00 34.12 3.13
5886 10946 7.765307 TCAAGCAATTATGATTCCTCAGTTTC 58.235 34.615 0.00 0.00 31.54 2.78
5887 10947 7.707624 TCAAGCAATTATGATTCCTCAGTTT 57.292 32.000 0.00 0.00 31.54 2.66
5888 10948 7.707624 TTCAAGCAATTATGATTCCTCAGTT 57.292 32.000 0.00 0.00 31.54 3.16
5889 10949 7.707624 TTTCAAGCAATTATGATTCCTCAGT 57.292 32.000 0.00 0.00 31.54 3.41
5890 10950 8.991243 TTTTTCAAGCAATTATGATTCCTCAG 57.009 30.769 0.00 0.00 31.54 3.35
5949 11009 6.292061 CGTGCAATTCTTCTCTGTAAGATAGC 60.292 42.308 0.00 0.00 45.62 2.97
5995 11055 2.929477 GTAACCCCCACCGTCCCA 60.929 66.667 0.00 0.00 0.00 4.37
6024 11084 3.433306 TTGGGAAACATTCATCTCCGT 57.567 42.857 0.00 0.00 0.00 4.69
6041 11101 0.602372 CGCCCACCCAAAATGTTTGG 60.602 55.000 12.00 12.00 39.25 3.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.