Multiple sequence alignment - TraesCS1D01G028300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G028300 chr1D 100.000 2219 0 0 1 2219 11201159 11198941 0.000000e+00 4098
1 TraesCS1D01G028300 chrUn 90.505 495 28 4 387 866 261626873 261627363 8.640000e-179 636
2 TraesCS1D01G028300 chrUn 90.508 295 24 4 1 294 261625127 261625418 9.610000e-104 387
3 TraesCS1D01G028300 chrUn 80.282 497 47 22 869 1332 261627480 261627958 5.910000e-86 327
4 TraesCS1D01G028300 chr1A 90.101 495 30 4 387 866 13279102 13278612 1.870000e-175 625
5 TraesCS1D01G028300 chr1A 85.399 589 57 11 772 1332 12684581 12685168 3.180000e-163 584
6 TraesCS1D01G028300 chr1A 91.014 345 27 1 387 731 12684151 12684491 1.550000e-126 462
7 TraesCS1D01G028300 chr1A 82.008 528 59 18 869 1362 13278495 13277970 1.230000e-112 416
8 TraesCS1D01G028300 chr1A 90.508 295 24 4 1 294 13280847 13280556 9.610000e-104 387
9 TraesCS1D01G028300 chr1A 90.203 296 25 4 1 295 12681197 12681489 1.240000e-102 383
10 TraesCS1D01G028300 chr7B 85.399 589 57 11 772 1332 192784102 192784689 3.180000e-163 584
11 TraesCS1D01G028300 chr7B 91.014 345 27 1 387 731 192783672 192784012 1.550000e-126 462
12 TraesCS1D01G028300 chr7B 90.203 296 25 4 1 295 192780718 192781010 1.240000e-102 383
13 TraesCS1D01G028300 chr2B 84.430 623 66 13 775 1368 47186179 47185559 3.180000e-163 584
14 TraesCS1D01G028300 chr2B 90.805 348 28 1 387 734 47186612 47186269 1.550000e-126 462
15 TraesCS1D01G028300 chr2B 90.203 296 25 4 1 295 47189566 47189274 1.240000e-102 383


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G028300 chr1D 11198941 11201159 2218 True 4098.000000 4098 100.000000 1 2219 1 chr1D.!!$R1 2218
1 TraesCS1D01G028300 chrUn 261625127 261627958 2831 False 450.000000 636 87.098333 1 1332 3 chrUn.!!$F1 1331
2 TraesCS1D01G028300 chr1A 12681197 12685168 3971 False 476.333333 584 88.872000 1 1332 3 chr1A.!!$F1 1331
3 TraesCS1D01G028300 chr1A 13277970 13280847 2877 True 476.000000 625 87.539000 1 1362 3 chr1A.!!$R1 1361
4 TraesCS1D01G028300 chr7B 192780718 192784689 3971 False 476.333333 584 88.872000 1 1332 3 chr7B.!!$F1 1331
5 TraesCS1D01G028300 chr2B 47185559 47189566 4007 True 476.333333 584 88.479333 1 1368 3 chr2B.!!$R1 1367

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
135 136 0.379669 GACGATAAAGAGGCGACGGA 59.620 55.0 0.00 0.0 0.00 4.69 F
1023 3924 0.607217 TGAGCTCCTCCGACAACGTA 60.607 55.0 12.15 0.0 37.88 3.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1053 3954 0.179166 CAGCGCACAACACAACAACT 60.179 50.0 11.47 0.0 0.00 3.16 R
2084 5030 0.181350 ACTCCAATTCGGATCAGCCC 59.819 55.0 0.00 0.0 45.19 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.947834 CTCCTTCTGTTGTGTTTCCAACT 59.052 43.478 5.73 0.00 44.01 3.16
26 27 2.285083 TCTGTTGTGTTTCCAACTCCG 58.715 47.619 5.73 0.00 44.01 4.63
36 37 3.412237 TTCCAACTCCGGAAAAGGTAG 57.588 47.619 5.23 0.00 42.16 3.18
38 39 2.974099 TCCAACTCCGGAAAAGGTAGAA 59.026 45.455 5.23 0.00 29.93 2.10
129 130 4.856664 TGTCTAATCGACGATAAAGAGGC 58.143 43.478 18.23 12.41 45.87 4.70
135 136 0.379669 GACGATAAAGAGGCGACGGA 59.620 55.000 0.00 0.00 0.00 4.69
175 176 7.050377 GGAATAAGTCCTTCTGATTGTGATCA 58.950 38.462 0.00 0.00 43.98 2.92
176 177 7.718753 GGAATAAGTCCTTCTGATTGTGATCAT 59.281 37.037 0.00 0.00 43.98 2.45
282 283 9.516314 TGTGTTTCTTCTAGATGTTATACGATG 57.484 33.333 5.60 0.00 0.00 3.84
300 301 5.845985 CGATGGCGTTATTCAATAGTGAT 57.154 39.130 0.00 0.00 32.48 3.06
302 303 4.811555 TGGCGTTATTCAATAGTGATGC 57.188 40.909 0.00 0.00 32.48 3.91
303 304 4.450976 TGGCGTTATTCAATAGTGATGCT 58.549 39.130 0.00 0.00 32.48 3.79
305 306 4.511454 GGCGTTATTCAATAGTGATGCTGA 59.489 41.667 0.00 0.00 32.48 4.26
306 307 5.180117 GGCGTTATTCAATAGTGATGCTGAT 59.820 40.000 0.00 0.00 32.48 2.90
308 309 7.134815 GCGTTATTCAATAGTGATGCTGATTT 58.865 34.615 0.00 0.00 32.48 2.17
323 481 7.765360 TGATGCTGATTTTGTTTTGTTTTCTCT 59.235 29.630 0.00 0.00 0.00 3.10
347 505 3.742882 TCATCGAGTGCAAAAGAAGACAG 59.257 43.478 0.00 0.00 0.00 3.51
351 509 1.331756 AGTGCAAAAGAAGACAGCGTG 59.668 47.619 0.00 0.00 0.00 5.34
354 512 2.223249 TGCAAAAGAAGACAGCGTGAAC 60.223 45.455 0.00 0.00 0.00 3.18
449 3165 9.534565 AATATCCTGTACATGTCGATATTATGC 57.465 33.333 19.00 0.00 35.43 3.14
453 3169 6.350528 CCTGTACATGTCGATATTATGCTCCT 60.351 42.308 0.00 0.00 0.00 3.69
516 3232 9.168451 TGAAGGACATATCGTTTTATTAAGCAA 57.832 29.630 0.00 0.00 33.11 3.91
532 3248 2.115052 AAGGGCCACGCATGACAA 59.885 55.556 6.18 0.00 0.00 3.18
533 3249 1.973281 AAGGGCCACGCATGACAAG 60.973 57.895 6.18 0.00 0.00 3.16
537 3253 2.906939 GCCACGCATGACAAGCACA 61.907 57.895 3.27 0.00 0.00 4.57
578 3294 8.969260 TCCTCATCTAGTTGAATAGTACGTTA 57.031 34.615 0.00 0.00 0.00 3.18
579 3295 9.570468 TCCTCATCTAGTTGAATAGTACGTTAT 57.430 33.333 0.00 0.00 0.00 1.89
623 3339 6.822442 TGACTTGTACTGTTGGTTCAATAGA 58.178 36.000 10.54 0.00 36.36 1.98
638 3354 6.039382 GGTTCAATAGAATGTTATCCACCACC 59.961 42.308 0.00 0.00 35.92 4.61
644 3360 5.684704 AGAATGTTATCCACCACCTACATG 58.315 41.667 0.00 0.00 0.00 3.21
646 3362 2.507886 TGTTATCCACCACCTACATGGG 59.492 50.000 0.00 0.00 44.81 4.00
669 3385 5.820947 GGGACTTGTATTGTCGGTTGAATAT 59.179 40.000 0.00 0.00 35.45 1.28
681 3397 9.621629 TTGTCGGTTGAATATTATGTTATCCTT 57.378 29.630 0.00 0.00 0.00 3.36
683 3399 8.015658 GTCGGTTGAATATTATGTTATCCTTGC 58.984 37.037 0.00 0.00 0.00 4.01
686 3402 6.494893 TGAATATTATGTTATCCTTGCCGC 57.505 37.500 0.00 0.00 0.00 6.53
710 3426 6.973474 GCGAGTTGAATAGTAGAACTACACAT 59.027 38.462 13.34 4.58 38.48 3.21
726 3442 7.615582 ACTACACATGTGGAATTTACAGATG 57.384 36.000 28.64 15.34 43.08 2.90
762 3478 2.291741 GGTTGCTTCTTTGACCTCAGTG 59.708 50.000 0.00 0.00 0.00 3.66
764 3480 0.877743 GCTTCTTTGACCTCAGTGCC 59.122 55.000 0.00 0.00 0.00 5.01
837 3617 4.445718 CACATCATTTTCCTACTCGATCGG 59.554 45.833 16.41 8.65 0.00 4.18
859 3639 5.500771 CGGTCGATCAATACAACACAATCAG 60.501 44.000 0.00 0.00 0.00 2.90
884 3778 4.803098 ACTTGTAAGTAGCATCGTTCCT 57.197 40.909 0.00 0.00 37.52 3.36
900 3794 3.185155 CTGGCACAAGCTGCTAGC 58.815 61.111 8.10 8.10 46.36 3.42
912 3810 0.873743 CTGCTAGCTAACGCTCCAGC 60.874 60.000 17.23 0.56 45.15 4.85
938 3837 5.305585 AGATTTAACGGTGAGTCACAACAT 58.694 37.500 24.20 9.93 35.67 2.71
939 3838 5.763204 AGATTTAACGGTGAGTCACAACATT 59.237 36.000 24.20 13.91 35.67 2.71
978 3879 6.331369 TGAGAAATCTTTAGCCTTGGTTTG 57.669 37.500 0.00 0.00 0.00 2.93
995 3896 5.502079 TGGTTTGAACTTCTGTCTTGGTAA 58.498 37.500 0.00 0.00 0.00 2.85
1001 3902 2.029290 ACTTCTGTCTTGGTAACGCGAT 60.029 45.455 15.93 2.34 42.51 4.58
1023 3924 0.607217 TGAGCTCCTCCGACAACGTA 60.607 55.000 12.15 0.00 37.88 3.57
1059 3960 2.203437 GGGTGGCCGGAAGTTGTT 60.203 61.111 5.05 0.00 0.00 2.83
1061 3962 1.826487 GGTGGCCGGAAGTTGTTGT 60.826 57.895 5.05 0.00 0.00 3.32
1093 3994 5.430007 CTGAAGAAGCCAAGAAGATCATCT 58.570 41.667 0.00 0.00 0.00 2.90
1113 4014 3.426568 GCAGACAAGCCTGACGCC 61.427 66.667 0.00 0.00 38.78 5.68
1122 4023 2.528743 GCCTGACGCCGACATCATG 61.529 63.158 0.00 0.00 0.00 3.07
1128 4029 2.528743 CGCCGACATCATGGTGCTC 61.529 63.158 5.69 2.28 0.00 4.26
1164 4105 1.002011 GACCAAGGACTTCAGGCCC 60.002 63.158 0.00 0.00 0.00 5.80
1167 4108 1.376037 CAAGGACTTCAGGCCCGAC 60.376 63.158 0.00 0.00 0.00 4.79
1239 4180 2.635714 CTAGCTTCATGTGCATGGTCA 58.364 47.619 11.68 0.00 39.24 4.02
1259 4200 9.793259 ATGGTCAAGACTCAAGAATAAGTTAAA 57.207 29.630 0.00 0.00 0.00 1.52
1260 4201 9.052759 TGGTCAAGACTCAAGAATAAGTTAAAC 57.947 33.333 0.00 0.00 0.00 2.01
1261 4202 9.052759 GGTCAAGACTCAAGAATAAGTTAAACA 57.947 33.333 0.00 0.00 0.00 2.83
1319 4265 9.695526 TCATGGATTTGAATTTCTTTAGTTGTG 57.304 29.630 0.00 0.00 0.00 3.33
1321 4267 9.696917 ATGGATTTGAATTTCTTTAGTTGTGTC 57.303 29.630 0.00 0.00 0.00 3.67
1322 4268 8.690884 TGGATTTGAATTTCTTTAGTTGTGTCA 58.309 29.630 0.00 0.00 0.00 3.58
1332 4278 0.732571 AGTTGTGTCAGGCGTGTTTG 59.267 50.000 6.26 0.00 0.00 2.93
1333 4279 0.450184 GTTGTGTCAGGCGTGTTTGT 59.550 50.000 6.26 0.00 0.00 2.83
1334 4280 1.135517 GTTGTGTCAGGCGTGTTTGTT 60.136 47.619 6.26 0.00 0.00 2.83
1339 4285 3.002862 GTGTCAGGCGTGTTTGTTATTCA 59.997 43.478 6.26 0.00 0.00 2.57
1341 4287 3.250040 GTCAGGCGTGTTTGTTATTCACT 59.750 43.478 6.26 0.00 0.00 3.41
1342 4288 4.449743 GTCAGGCGTGTTTGTTATTCACTA 59.550 41.667 6.26 0.00 0.00 2.74
1343 4289 5.121768 GTCAGGCGTGTTTGTTATTCACTAT 59.878 40.000 6.26 0.00 0.00 2.12
1344 4290 5.121611 TCAGGCGTGTTTGTTATTCACTATG 59.878 40.000 6.26 0.00 0.00 2.23
1345 4291 5.001232 AGGCGTGTTTGTTATTCACTATGT 58.999 37.500 0.00 0.00 0.00 2.29
1346 4292 5.121768 AGGCGTGTTTGTTATTCACTATGTC 59.878 40.000 0.00 0.00 0.00 3.06
1377 4323 8.037382 CATGTATCTCCCATGTGAATGATTAC 57.963 38.462 0.00 0.00 35.94 1.89
1378 4324 7.135591 TGTATCTCCCATGTGAATGATTACA 57.864 36.000 0.00 0.00 0.00 2.41
1379 4325 7.572814 TGTATCTCCCATGTGAATGATTACAA 58.427 34.615 0.00 0.00 0.00 2.41
1380 4326 8.219868 TGTATCTCCCATGTGAATGATTACAAT 58.780 33.333 0.00 0.00 0.00 2.71
1381 4327 9.725019 GTATCTCCCATGTGAATGATTACAATA 57.275 33.333 0.00 0.00 0.00 1.90
1383 4329 8.450578 TCTCCCATGTGAATGATTACAATAAC 57.549 34.615 0.00 0.00 0.00 1.89
1384 4330 8.274322 TCTCCCATGTGAATGATTACAATAACT 58.726 33.333 0.00 0.00 0.00 2.24
1385 4331 8.450578 TCCCATGTGAATGATTACAATAACTC 57.549 34.615 0.00 0.00 0.00 3.01
1386 4332 7.502226 TCCCATGTGAATGATTACAATAACTCC 59.498 37.037 0.00 0.00 0.00 3.85
1387 4333 7.503566 CCCATGTGAATGATTACAATAACTCCT 59.496 37.037 0.00 0.00 0.00 3.69
1388 4334 8.347771 CCATGTGAATGATTACAATAACTCCTG 58.652 37.037 0.00 0.00 0.00 3.86
1389 4335 9.112725 CATGTGAATGATTACAATAACTCCTGA 57.887 33.333 0.00 0.00 0.00 3.86
1390 4336 9.857656 ATGTGAATGATTACAATAACTCCTGAT 57.142 29.630 0.00 0.00 0.00 2.90
1391 4337 9.112725 TGTGAATGATTACAATAACTCCTGATG 57.887 33.333 0.00 0.00 0.00 3.07
1392 4338 9.113838 GTGAATGATTACAATAACTCCTGATGT 57.886 33.333 0.00 0.00 0.00 3.06
1393 4339 9.685276 TGAATGATTACAATAACTCCTGATGTT 57.315 29.630 0.00 0.00 0.00 2.71
1394 4340 9.941664 GAATGATTACAATAACTCCTGATGTTG 57.058 33.333 0.00 0.00 0.00 3.33
1395 4341 9.685276 AATGATTACAATAACTCCTGATGTTGA 57.315 29.630 0.00 0.00 0.00 3.18
1396 4342 9.685276 ATGATTACAATAACTCCTGATGTTGAA 57.315 29.630 0.00 0.00 0.00 2.69
1397 4343 9.513906 TGATTACAATAACTCCTGATGTTGAAA 57.486 29.630 0.00 0.00 0.00 2.69
1400 4346 9.513906 TTACAATAACTCCTGATGTTGAAATCA 57.486 29.630 0.00 0.00 35.31 2.57
1411 4357 6.166279 TGATGTTGAAATCAGACTGTACTCC 58.834 40.000 1.59 0.00 32.75 3.85
1412 4358 5.808366 TGTTGAAATCAGACTGTACTCCT 57.192 39.130 1.59 0.00 0.00 3.69
1413 4359 6.911250 TGTTGAAATCAGACTGTACTCCTA 57.089 37.500 1.59 0.00 0.00 2.94
1414 4360 6.688578 TGTTGAAATCAGACTGTACTCCTAC 58.311 40.000 1.59 0.00 0.00 3.18
1415 4361 6.266786 TGTTGAAATCAGACTGTACTCCTACA 59.733 38.462 1.59 1.22 0.00 2.74
1416 4362 6.911250 TGAAATCAGACTGTACTCCTACAA 57.089 37.500 1.59 0.00 32.24 2.41
1417 4363 7.297936 TGAAATCAGACTGTACTCCTACAAA 57.702 36.000 1.59 0.00 32.24 2.83
1418 4364 7.732025 TGAAATCAGACTGTACTCCTACAAAA 58.268 34.615 1.59 0.00 32.24 2.44
1419 4365 8.208224 TGAAATCAGACTGTACTCCTACAAAAA 58.792 33.333 1.59 0.00 32.24 1.94
1420 4366 7.964604 AATCAGACTGTACTCCTACAAAAAC 57.035 36.000 1.59 0.00 32.24 2.43
1421 4367 6.726490 TCAGACTGTACTCCTACAAAAACT 57.274 37.500 1.59 0.00 32.24 2.66
1422 4368 7.120923 TCAGACTGTACTCCTACAAAAACTT 57.879 36.000 1.59 0.00 32.24 2.66
1423 4369 8.241497 TCAGACTGTACTCCTACAAAAACTTA 57.759 34.615 1.59 0.00 32.24 2.24
1424 4370 8.698210 TCAGACTGTACTCCTACAAAAACTTAA 58.302 33.333 1.59 0.00 32.24 1.85
1425 4371 9.321562 CAGACTGTACTCCTACAAAAACTTAAA 57.678 33.333 0.00 0.00 32.24 1.52
1426 4372 9.895138 AGACTGTACTCCTACAAAAACTTAAAA 57.105 29.630 0.00 0.00 32.24 1.52
1455 4401 8.388484 TCGTATATGAAAAGTCTAGAGTACCC 57.612 38.462 0.00 0.00 0.00 3.69
1456 4402 8.216423 TCGTATATGAAAAGTCTAGAGTACCCT 58.784 37.037 0.00 0.00 0.00 4.34
1457 4403 8.848182 CGTATATGAAAAGTCTAGAGTACCCTT 58.152 37.037 0.00 0.00 0.00 3.95
1458 4404 9.968870 GTATATGAAAAGTCTAGAGTACCCTTG 57.031 37.037 0.00 0.00 0.00 3.61
1459 4405 8.840200 ATATGAAAAGTCTAGAGTACCCTTGA 57.160 34.615 0.00 0.00 0.00 3.02
1460 4406 7.741554 ATGAAAAGTCTAGAGTACCCTTGAT 57.258 36.000 0.00 0.00 0.00 2.57
1461 4407 7.554959 TGAAAAGTCTAGAGTACCCTTGATT 57.445 36.000 0.00 0.00 0.00 2.57
1462 4408 7.974504 TGAAAAGTCTAGAGTACCCTTGATTT 58.025 34.615 0.00 0.00 0.00 2.17
1463 4409 8.437575 TGAAAAGTCTAGAGTACCCTTGATTTT 58.562 33.333 0.00 4.19 32.59 1.82
1464 4410 9.286170 GAAAAGTCTAGAGTACCCTTGATTTTT 57.714 33.333 16.78 16.78 38.95 1.94
1465 4411 8.850007 AAAGTCTAGAGTACCCTTGATTTTTC 57.150 34.615 0.00 0.00 29.20 2.29
1466 4412 7.800300 AGTCTAGAGTACCCTTGATTTTTCT 57.200 36.000 0.00 0.00 0.00 2.52
1467 4413 7.842982 AGTCTAGAGTACCCTTGATTTTTCTC 58.157 38.462 0.00 0.00 0.00 2.87
1468 4414 7.676468 AGTCTAGAGTACCCTTGATTTTTCTCT 59.324 37.037 0.00 0.00 35.61 3.10
1469 4415 8.315482 GTCTAGAGTACCCTTGATTTTTCTCTT 58.685 37.037 0.00 0.00 33.85 2.85
1470 4416 8.881262 TCTAGAGTACCCTTGATTTTTCTCTTT 58.119 33.333 0.00 0.00 33.85 2.52
1509 4455 8.664669 AACCCATTCTTGATAGGTAAAAATGT 57.335 30.769 0.00 0.00 0.00 2.71
1510 4456 8.664669 ACCCATTCTTGATAGGTAAAAATGTT 57.335 30.769 0.00 0.00 0.00 2.71
1511 4457 9.762381 ACCCATTCTTGATAGGTAAAAATGTTA 57.238 29.630 0.00 0.00 0.00 2.41
1519 4465 8.665643 TGATAGGTAAAAATGTTATGTACCCG 57.334 34.615 0.00 0.00 35.77 5.28
1520 4466 8.266473 TGATAGGTAAAAATGTTATGTACCCGT 58.734 33.333 0.00 0.00 35.77 5.28
1521 4467 9.112725 GATAGGTAAAAATGTTATGTACCCGTT 57.887 33.333 0.00 0.00 35.77 4.44
1522 4468 7.381766 AGGTAAAAATGTTATGTACCCGTTC 57.618 36.000 0.00 0.00 35.77 3.95
1523 4469 7.170277 AGGTAAAAATGTTATGTACCCGTTCT 58.830 34.615 0.00 0.00 35.77 3.01
1524 4470 8.320617 AGGTAAAAATGTTATGTACCCGTTCTA 58.679 33.333 0.00 0.00 35.77 2.10
1525 4471 9.112725 GGTAAAAATGTTATGTACCCGTTCTAT 57.887 33.333 0.00 0.00 0.00 1.98
1528 4474 9.849166 AAAAATGTTATGTACCCGTTCTATTTG 57.151 29.630 0.00 0.00 0.00 2.32
1529 4475 8.795842 AAATGTTATGTACCCGTTCTATTTGA 57.204 30.769 0.00 0.00 0.00 2.69
1530 4476 7.781548 ATGTTATGTACCCGTTCTATTTGAC 57.218 36.000 0.00 0.00 0.00 3.18
1531 4477 6.108015 TGTTATGTACCCGTTCTATTTGACC 58.892 40.000 0.00 0.00 0.00 4.02
1532 4478 4.829872 ATGTACCCGTTCTATTTGACCA 57.170 40.909 0.00 0.00 0.00 4.02
1533 4479 4.620589 TGTACCCGTTCTATTTGACCAA 57.379 40.909 0.00 0.00 0.00 3.67
1534 4480 4.970711 TGTACCCGTTCTATTTGACCAAA 58.029 39.130 0.00 0.00 34.46 3.28
1535 4481 5.562635 TGTACCCGTTCTATTTGACCAAAT 58.437 37.500 12.02 12.02 42.95 2.32
1536 4482 6.005198 TGTACCCGTTCTATTTGACCAAATT 58.995 36.000 12.51 0.00 40.99 1.82
1537 4483 6.490721 TGTACCCGTTCTATTTGACCAAATTT 59.509 34.615 12.51 0.00 40.99 1.82
1538 4484 7.664731 TGTACCCGTTCTATTTGACCAAATTTA 59.335 33.333 12.51 0.58 40.99 1.40
1539 4485 7.712204 ACCCGTTCTATTTGACCAAATTTAT 57.288 32.000 12.51 0.00 40.99 1.40
1540 4486 8.810990 ACCCGTTCTATTTGACCAAATTTATA 57.189 30.769 12.51 0.00 40.99 0.98
1541 4487 9.416284 ACCCGTTCTATTTGACCAAATTTATAT 57.584 29.630 12.51 0.00 40.99 0.86
1542 4488 9.893305 CCCGTTCTATTTGACCAAATTTATATC 57.107 33.333 12.51 0.00 40.99 1.63
1713 4659 8.801882 ATATGAAAGTATTTTGAAACCGAGGA 57.198 30.769 0.00 0.00 39.27 3.71
1714 4660 7.703058 ATGAAAGTATTTTGAAACCGAGGAT 57.297 32.000 0.00 0.00 39.27 3.24
1715 4661 7.519032 TGAAAGTATTTTGAAACCGAGGATT 57.481 32.000 0.00 0.00 39.27 3.01
1716 4662 8.624367 TGAAAGTATTTTGAAACCGAGGATTA 57.376 30.769 0.00 0.00 39.27 1.75
1717 4663 8.726988 TGAAAGTATTTTGAAACCGAGGATTAG 58.273 33.333 0.00 0.00 39.27 1.73
1718 4664 8.631480 AAAGTATTTTGAAACCGAGGATTAGT 57.369 30.769 0.00 0.00 31.62 2.24
1719 4665 8.631480 AAGTATTTTGAAACCGAGGATTAGTT 57.369 30.769 0.00 0.00 0.00 2.24
1720 4666 8.040716 AGTATTTTGAAACCGAGGATTAGTTG 57.959 34.615 0.00 0.00 0.00 3.16
1721 4667 4.759516 TTTGAAACCGAGGATTAGTTGC 57.240 40.909 0.00 0.00 0.00 4.17
1722 4668 3.410631 TGAAACCGAGGATTAGTTGCA 57.589 42.857 0.00 0.00 0.00 4.08
1723 4669 3.745799 TGAAACCGAGGATTAGTTGCAA 58.254 40.909 0.00 0.00 0.00 4.08
1724 4670 4.138290 TGAAACCGAGGATTAGTTGCAAA 58.862 39.130 0.00 0.00 0.00 3.68
1725 4671 4.580995 TGAAACCGAGGATTAGTTGCAAAA 59.419 37.500 0.00 0.00 0.00 2.44
1726 4672 5.242838 TGAAACCGAGGATTAGTTGCAAAAT 59.757 36.000 0.00 0.00 0.00 1.82
1727 4673 5.722021 AACCGAGGATTAGTTGCAAAATT 57.278 34.783 0.00 0.00 0.00 1.82
1728 4674 6.827586 AACCGAGGATTAGTTGCAAAATTA 57.172 33.333 0.00 0.00 0.00 1.40
1729 4675 6.190954 ACCGAGGATTAGTTGCAAAATTAC 57.809 37.500 0.00 0.00 0.00 1.89
1730 4676 5.708230 ACCGAGGATTAGTTGCAAAATTACA 59.292 36.000 0.00 0.00 0.00 2.41
1731 4677 6.027749 CCGAGGATTAGTTGCAAAATTACAC 58.972 40.000 0.00 0.00 0.00 2.90
1732 4678 6.348950 CCGAGGATTAGTTGCAAAATTACACA 60.349 38.462 0.00 0.00 0.00 3.72
1733 4679 6.523201 CGAGGATTAGTTGCAAAATTACACAC 59.477 38.462 0.00 0.00 0.00 3.82
1734 4680 6.687604 AGGATTAGTTGCAAAATTACACACC 58.312 36.000 0.00 0.00 0.00 4.16
1735 4681 5.867174 GGATTAGTTGCAAAATTACACACCC 59.133 40.000 0.00 0.00 0.00 4.61
1736 4682 6.295067 GGATTAGTTGCAAAATTACACACCCT 60.295 38.462 0.00 0.00 0.00 4.34
1737 4683 6.472686 TTAGTTGCAAAATTACACACCCTT 57.527 33.333 0.00 0.00 0.00 3.95
1738 4684 4.692228 AGTTGCAAAATTACACACCCTTG 58.308 39.130 0.00 0.00 0.00 3.61
1739 4685 3.742433 TGCAAAATTACACACCCTTGG 57.258 42.857 0.00 0.00 0.00 3.61
1740 4686 2.224161 TGCAAAATTACACACCCTTGGC 60.224 45.455 0.00 0.00 0.00 4.52
1741 4687 2.037121 GCAAAATTACACACCCTTGGCT 59.963 45.455 0.00 0.00 0.00 4.75
1742 4688 3.494223 GCAAAATTACACACCCTTGGCTT 60.494 43.478 0.00 0.00 0.00 4.35
1743 4689 4.057432 CAAAATTACACACCCTTGGCTTG 58.943 43.478 0.00 0.00 0.00 4.01
1744 4690 2.969821 ATTACACACCCTTGGCTTGA 57.030 45.000 0.00 0.00 0.00 3.02
1745 4691 2.969821 TTACACACCCTTGGCTTGAT 57.030 45.000 0.00 0.00 0.00 2.57
1746 4692 2.969821 TACACACCCTTGGCTTGATT 57.030 45.000 0.00 0.00 0.00 2.57
1747 4693 2.086610 ACACACCCTTGGCTTGATTT 57.913 45.000 0.00 0.00 0.00 2.17
1748 4694 3.237268 ACACACCCTTGGCTTGATTTA 57.763 42.857 0.00 0.00 0.00 1.40
1749 4695 3.778265 ACACACCCTTGGCTTGATTTAT 58.222 40.909 0.00 0.00 0.00 1.40
1750 4696 4.159557 ACACACCCTTGGCTTGATTTATT 58.840 39.130 0.00 0.00 0.00 1.40
1751 4697 4.592778 ACACACCCTTGGCTTGATTTATTT 59.407 37.500 0.00 0.00 0.00 1.40
1752 4698 5.071653 ACACACCCTTGGCTTGATTTATTTT 59.928 36.000 0.00 0.00 0.00 1.82
1753 4699 6.268847 ACACACCCTTGGCTTGATTTATTTTA 59.731 34.615 0.00 0.00 0.00 1.52
1754 4700 6.589907 CACACCCTTGGCTTGATTTATTTTAC 59.410 38.462 0.00 0.00 0.00 2.01
1755 4701 6.496911 ACACCCTTGGCTTGATTTATTTTACT 59.503 34.615 0.00 0.00 0.00 2.24
1756 4702 7.016170 ACACCCTTGGCTTGATTTATTTTACTT 59.984 33.333 0.00 0.00 0.00 2.24
1757 4703 7.331687 CACCCTTGGCTTGATTTATTTTACTTG 59.668 37.037 0.00 0.00 0.00 3.16
1758 4704 6.818142 CCCTTGGCTTGATTTATTTTACTTGG 59.182 38.462 0.00 0.00 0.00 3.61
1759 4705 7.310361 CCCTTGGCTTGATTTATTTTACTTGGA 60.310 37.037 0.00 0.00 0.00 3.53
1760 4706 8.093927 CCTTGGCTTGATTTATTTTACTTGGAA 58.906 33.333 0.00 0.00 0.00 3.53
1761 4707 9.487790 CTTGGCTTGATTTATTTTACTTGGAAA 57.512 29.630 0.00 0.00 0.00 3.13
1762 4708 9.838339 TTGGCTTGATTTATTTTACTTGGAAAA 57.162 25.926 0.00 0.00 33.04 2.29
1763 4709 9.487790 TGGCTTGATTTATTTTACTTGGAAAAG 57.512 29.630 0.00 0.00 32.06 2.27
1764 4710 8.935844 GGCTTGATTTATTTTACTTGGAAAAGG 58.064 33.333 0.00 0.00 32.06 3.11
1765 4711 9.489084 GCTTGATTTATTTTACTTGGAAAAGGT 57.511 29.630 0.00 0.00 32.06 3.50
1768 4714 9.974980 TGATTTATTTTACTTGGAAAAGGTGAC 57.025 29.630 0.00 0.00 32.06 3.67
1769 4715 9.124807 GATTTATTTTACTTGGAAAAGGTGACG 57.875 33.333 0.00 0.00 32.06 4.35
1770 4716 7.571080 TTATTTTACTTGGAAAAGGTGACGT 57.429 32.000 0.00 0.00 32.06 4.34
1771 4717 5.900865 TTTTACTTGGAAAAGGTGACGTT 57.099 34.783 0.00 0.00 0.00 3.99
1772 4718 6.998968 TTTTACTTGGAAAAGGTGACGTTA 57.001 33.333 0.00 0.00 0.00 3.18
1773 4719 6.998968 TTTACTTGGAAAAGGTGACGTTAA 57.001 33.333 0.00 0.00 0.00 2.01
1774 4720 6.607735 TTACTTGGAAAAGGTGACGTTAAG 57.392 37.500 0.00 0.00 0.00 1.85
1775 4721 3.881089 ACTTGGAAAAGGTGACGTTAAGG 59.119 43.478 0.00 0.00 0.00 2.69
1776 4722 3.564053 TGGAAAAGGTGACGTTAAGGT 57.436 42.857 0.00 0.00 0.00 3.50
1777 4723 3.888583 TGGAAAAGGTGACGTTAAGGTT 58.111 40.909 1.77 0.00 0.00 3.50
1778 4724 4.271661 TGGAAAAGGTGACGTTAAGGTTT 58.728 39.130 1.77 0.00 0.00 3.27
1779 4725 4.336153 TGGAAAAGGTGACGTTAAGGTTTC 59.664 41.667 1.77 1.54 0.00 2.78
1780 4726 4.336153 GGAAAAGGTGACGTTAAGGTTTCA 59.664 41.667 1.77 0.00 0.00 2.69
1781 4727 4.888038 AAAGGTGACGTTAAGGTTTCAC 57.112 40.909 1.77 6.88 38.11 3.18
1782 4728 3.547054 AGGTGACGTTAAGGTTTCACA 57.453 42.857 16.99 3.72 40.18 3.58
1783 4729 3.876341 AGGTGACGTTAAGGTTTCACAA 58.124 40.909 16.99 0.00 40.18 3.33
1784 4730 3.624410 AGGTGACGTTAAGGTTTCACAAC 59.376 43.478 16.99 8.04 40.18 3.32
1785 4731 3.374678 GGTGACGTTAAGGTTTCACAACA 59.625 43.478 16.99 2.27 40.18 3.33
1786 4732 4.142643 GGTGACGTTAAGGTTTCACAACAA 60.143 41.667 16.99 0.00 40.18 2.83
1787 4733 4.789629 GTGACGTTAAGGTTTCACAACAAC 59.210 41.667 12.64 0.00 38.60 3.32
1788 4734 4.696402 TGACGTTAAGGTTTCACAACAACT 59.304 37.500 1.77 0.00 34.15 3.16
1789 4735 5.873712 TGACGTTAAGGTTTCACAACAACTA 59.126 36.000 1.77 0.00 34.15 2.24
1790 4736 6.539464 TGACGTTAAGGTTTCACAACAACTAT 59.461 34.615 1.77 0.00 34.15 2.12
1791 4737 7.710044 TGACGTTAAGGTTTCACAACAACTATA 59.290 33.333 1.77 0.00 34.15 1.31
1792 4738 8.436046 ACGTTAAGGTTTCACAACAACTATAA 57.564 30.769 0.00 0.00 34.15 0.98
1793 4739 8.553696 ACGTTAAGGTTTCACAACAACTATAAG 58.446 33.333 0.00 0.00 34.15 1.73
1794 4740 8.767085 CGTTAAGGTTTCACAACAACTATAAGA 58.233 33.333 0.00 0.00 34.15 2.10
1829 4775 9.613428 TTCCCAAATTATACTTCTATCAGTGTG 57.387 33.333 0.00 0.00 0.00 3.82
1830 4776 8.210946 TCCCAAATTATACTTCTATCAGTGTGG 58.789 37.037 0.00 0.00 0.00 4.17
1831 4777 7.993183 CCCAAATTATACTTCTATCAGTGTGGT 59.007 37.037 0.00 0.00 0.00 4.16
1832 4778 8.830580 CCAAATTATACTTCTATCAGTGTGGTG 58.169 37.037 0.00 0.00 0.00 4.17
1833 4779 9.383519 CAAATTATACTTCTATCAGTGTGGTGT 57.616 33.333 0.00 0.00 0.00 4.16
1834 4780 9.601217 AAATTATACTTCTATCAGTGTGGTGTC 57.399 33.333 0.00 0.00 0.00 3.67
1835 4781 7.712204 TTATACTTCTATCAGTGTGGTGTCA 57.288 36.000 0.00 0.00 0.00 3.58
1836 4782 4.955811 ACTTCTATCAGTGTGGTGTCAA 57.044 40.909 0.00 0.00 0.00 3.18
1837 4783 5.489792 ACTTCTATCAGTGTGGTGTCAAT 57.510 39.130 0.00 0.00 0.00 2.57
1838 4784 5.240891 ACTTCTATCAGTGTGGTGTCAATG 58.759 41.667 0.00 0.00 35.19 2.82
1839 4785 5.012046 ACTTCTATCAGTGTGGTGTCAATGA 59.988 40.000 0.00 0.00 44.32 2.57
1840 4786 4.820897 TCTATCAGTGTGGTGTCAATGAC 58.179 43.478 6.41 6.41 43.33 3.06
1841 4787 2.998316 TCAGTGTGGTGTCAATGACA 57.002 45.000 12.63 12.63 40.50 3.58
1891 4837 9.462174 TTGGAAATTACATGATAATCATTTCGC 57.538 29.630 0.00 0.56 34.28 4.70
1892 4838 8.628280 TGGAAATTACATGATAATCATTTCGCA 58.372 29.630 0.00 2.69 34.28 5.10
1893 4839 9.462174 GGAAATTACATGATAATCATTTCGCAA 57.538 29.630 0.00 0.00 34.28 4.85
1985 4931 8.495361 TAAAACCATATTTTTAGCAGTAGCGA 57.505 30.769 0.00 0.00 36.57 4.93
1986 4932 8.609176 TAAAACCATATTTTTAGCAGTAGCGAG 58.391 33.333 0.00 0.00 36.57 5.03
1995 4941 2.025544 GCAGTAGCGAGATACGAGTG 57.974 55.000 0.00 0.00 45.77 3.51
1996 4942 1.922444 GCAGTAGCGAGATACGAGTGC 60.922 57.143 0.00 0.00 45.77 4.40
1997 4943 0.945813 AGTAGCGAGATACGAGTGCC 59.054 55.000 0.00 0.00 45.77 5.01
1998 4944 0.945813 GTAGCGAGATACGAGTGCCT 59.054 55.000 0.00 0.00 45.77 4.75
1999 4945 2.141517 GTAGCGAGATACGAGTGCCTA 58.858 52.381 0.00 0.00 45.77 3.93
2000 4946 1.898902 AGCGAGATACGAGTGCCTAT 58.101 50.000 0.00 0.00 45.77 2.57
2001 4947 1.537638 AGCGAGATACGAGTGCCTATG 59.462 52.381 0.00 0.00 45.77 2.23
2002 4948 1.535896 GCGAGATACGAGTGCCTATGA 59.464 52.381 0.00 0.00 45.77 2.15
2003 4949 2.031069 GCGAGATACGAGTGCCTATGAA 60.031 50.000 0.00 0.00 45.77 2.57
2004 4950 3.550233 GCGAGATACGAGTGCCTATGAAA 60.550 47.826 0.00 0.00 45.77 2.69
2005 4951 3.975670 CGAGATACGAGTGCCTATGAAAC 59.024 47.826 0.00 0.00 45.77 2.78
2006 4952 4.497507 CGAGATACGAGTGCCTATGAAACA 60.498 45.833 0.00 0.00 45.77 2.83
2007 4953 5.339008 AGATACGAGTGCCTATGAAACAA 57.661 39.130 0.00 0.00 0.00 2.83
2008 4954 5.352284 AGATACGAGTGCCTATGAAACAAG 58.648 41.667 0.00 0.00 0.00 3.16
2009 4955 3.678056 ACGAGTGCCTATGAAACAAGA 57.322 42.857 0.00 0.00 0.00 3.02
2010 4956 4.207891 ACGAGTGCCTATGAAACAAGAT 57.792 40.909 0.00 0.00 0.00 2.40
2011 4957 5.339008 ACGAGTGCCTATGAAACAAGATA 57.661 39.130 0.00 0.00 0.00 1.98
2012 4958 5.918608 ACGAGTGCCTATGAAACAAGATAT 58.081 37.500 0.00 0.00 0.00 1.63
2013 4959 6.349300 ACGAGTGCCTATGAAACAAGATATT 58.651 36.000 0.00 0.00 0.00 1.28
2014 4960 6.258727 ACGAGTGCCTATGAAACAAGATATTG 59.741 38.462 0.00 0.00 0.00 1.90
2015 4961 6.258727 CGAGTGCCTATGAAACAAGATATTGT 59.741 38.462 0.00 0.00 36.59 2.71
2016 4962 7.438160 CGAGTGCCTATGAAACAAGATATTGTA 59.562 37.037 6.07 0.00 34.24 2.41
2017 4963 9.277783 GAGTGCCTATGAAACAAGATATTGTAT 57.722 33.333 6.07 0.00 34.24 2.29
2018 4964 9.632638 AGTGCCTATGAAACAAGATATTGTATT 57.367 29.630 6.07 3.54 34.24 1.89
2036 4982 5.708948 TGTATTAAACAAACTGAGCATGGC 58.291 37.500 0.00 0.00 34.29 4.40
2037 4983 5.476599 TGTATTAAACAAACTGAGCATGGCT 59.523 36.000 0.00 0.00 36.96 4.75
2038 4984 6.657117 TGTATTAAACAAACTGAGCATGGCTA 59.343 34.615 0.00 0.00 35.10 3.93
2039 4985 6.588719 ATTAAACAAACTGAGCATGGCTAA 57.411 33.333 0.00 0.00 39.88 3.09
2040 4986 6.588719 TTAAACAAACTGAGCATGGCTAAT 57.411 33.333 0.00 0.00 39.88 1.73
2041 4987 7.695480 TTAAACAAACTGAGCATGGCTAATA 57.305 32.000 0.00 0.00 39.88 0.98
2042 4988 5.567138 AACAAACTGAGCATGGCTAATAC 57.433 39.130 0.00 0.00 39.88 1.89
2043 4989 4.848357 ACAAACTGAGCATGGCTAATACT 58.152 39.130 0.00 0.00 39.88 2.12
2044 4990 5.989477 ACAAACTGAGCATGGCTAATACTA 58.011 37.500 0.00 0.00 39.88 1.82
2045 4991 6.595682 ACAAACTGAGCATGGCTAATACTAT 58.404 36.000 0.00 0.00 39.88 2.12
2046 4992 7.735917 ACAAACTGAGCATGGCTAATACTATA 58.264 34.615 0.00 0.00 39.88 1.31
2047 4993 7.875041 ACAAACTGAGCATGGCTAATACTATAG 59.125 37.037 0.00 0.00 39.88 1.31
2048 4994 7.546250 AACTGAGCATGGCTAATACTATAGT 57.454 36.000 10.87 10.87 39.88 2.12
2049 4995 7.164230 ACTGAGCATGGCTAATACTATAGTC 57.836 40.000 9.12 0.00 39.88 2.59
2050 4996 6.721668 ACTGAGCATGGCTAATACTATAGTCA 59.278 38.462 9.12 0.07 41.40 3.41
2051 4997 6.925211 TGAGCATGGCTAATACTATAGTCAC 58.075 40.000 9.12 0.00 40.09 3.67
2052 4998 6.721668 TGAGCATGGCTAATACTATAGTCACT 59.278 38.462 9.12 0.00 40.09 3.41
2053 4999 7.094162 TGAGCATGGCTAATACTATAGTCACTC 60.094 40.741 9.12 5.00 40.09 3.51
2054 5000 6.030849 GCATGGCTAATACTATAGTCACTCG 58.969 44.000 9.12 0.00 40.09 4.18
2055 5001 6.127980 GCATGGCTAATACTATAGTCACTCGA 60.128 42.308 9.12 0.00 40.09 4.04
2056 5002 7.415765 GCATGGCTAATACTATAGTCACTCGAT 60.416 40.741 9.12 0.00 40.09 3.59
2057 5003 7.379098 TGGCTAATACTATAGTCACTCGATG 57.621 40.000 9.12 0.00 32.78 3.84
2058 5004 6.940867 TGGCTAATACTATAGTCACTCGATGT 59.059 38.462 9.12 0.00 32.78 3.06
2059 5005 7.119407 TGGCTAATACTATAGTCACTCGATGTC 59.881 40.741 9.12 0.00 32.78 3.06
2060 5006 7.334921 GGCTAATACTATAGTCACTCGATGTCT 59.665 40.741 9.12 0.00 0.00 3.41
2061 5007 9.368674 GCTAATACTATAGTCACTCGATGTCTA 57.631 37.037 9.12 0.00 34.12 2.59
2066 5012 8.725405 ACTATAGTCACTCGATGTCTATATGG 57.275 38.462 0.00 10.71 39.58 2.74
2067 5013 8.541234 ACTATAGTCACTCGATGTCTATATGGA 58.459 37.037 0.00 0.00 39.58 3.41
2068 5014 7.857734 ATAGTCACTCGATGTCTATATGGAG 57.142 40.000 10.45 0.00 37.74 3.86
2069 5015 5.626142 AGTCACTCGATGTCTATATGGAGT 58.374 41.667 0.00 0.00 43.88 3.85
2070 5016 6.065374 AGTCACTCGATGTCTATATGGAGTT 58.935 40.000 2.40 0.00 41.46 3.01
2071 5017 6.016693 AGTCACTCGATGTCTATATGGAGTTG 60.017 42.308 2.40 0.70 41.46 3.16
2072 5018 4.920340 CACTCGATGTCTATATGGAGTTGC 59.080 45.833 2.40 0.00 41.46 4.17
2073 5019 4.021894 ACTCGATGTCTATATGGAGTTGCC 60.022 45.833 0.00 0.00 41.46 4.52
2084 5030 3.548745 TGGAGTTGCCATGTCATCTAG 57.451 47.619 0.00 0.00 43.33 2.43
2085 5031 2.171237 TGGAGTTGCCATGTCATCTAGG 59.829 50.000 0.00 0.00 43.33 3.02
2086 5032 2.486191 GGAGTTGCCATGTCATCTAGGG 60.486 54.545 0.00 0.00 36.34 3.53
2087 5033 1.133976 AGTTGCCATGTCATCTAGGGC 60.134 52.381 5.19 5.19 44.82 5.19
2088 5034 1.133976 GTTGCCATGTCATCTAGGGCT 60.134 52.381 11.90 0.00 44.85 5.19
2089 5035 0.471191 TGCCATGTCATCTAGGGCTG 59.529 55.000 11.90 0.00 44.85 4.85
2090 5036 0.761187 GCCATGTCATCTAGGGCTGA 59.239 55.000 4.94 0.00 41.39 4.26
2091 5037 1.350351 GCCATGTCATCTAGGGCTGAT 59.650 52.381 4.94 0.00 41.39 2.90
2092 5038 2.614987 GCCATGTCATCTAGGGCTGATC 60.615 54.545 4.94 0.00 41.39 2.92
2093 5039 2.027377 CCATGTCATCTAGGGCTGATCC 60.027 54.545 0.00 0.00 0.00 3.36
2094 5040 1.332195 TGTCATCTAGGGCTGATCCG 58.668 55.000 0.00 0.00 34.94 4.18
2095 5041 1.133482 TGTCATCTAGGGCTGATCCGA 60.133 52.381 0.00 0.00 34.94 4.55
2096 5042 1.964223 GTCATCTAGGGCTGATCCGAA 59.036 52.381 0.00 0.00 34.94 4.30
2097 5043 2.564947 GTCATCTAGGGCTGATCCGAAT 59.435 50.000 0.00 0.00 34.94 3.34
2098 5044 3.007398 GTCATCTAGGGCTGATCCGAATT 59.993 47.826 0.00 0.00 34.94 2.17
2099 5045 3.007290 TCATCTAGGGCTGATCCGAATTG 59.993 47.826 0.00 0.00 34.94 2.32
2100 5046 1.694150 TCTAGGGCTGATCCGAATTGG 59.306 52.381 0.00 0.00 40.09 3.16
2114 5060 6.835819 TCCGAATTGGAGTATCATAGTAGG 57.164 41.667 0.00 0.00 43.74 3.18
2115 5061 6.312529 TCCGAATTGGAGTATCATAGTAGGT 58.687 40.000 0.00 0.00 43.74 3.08
2116 5062 7.464273 TCCGAATTGGAGTATCATAGTAGGTA 58.536 38.462 0.00 0.00 43.74 3.08
2117 5063 8.114102 TCCGAATTGGAGTATCATAGTAGGTAT 58.886 37.037 0.00 0.00 43.74 2.73
2118 5064 8.407064 CCGAATTGGAGTATCATAGTAGGTATC 58.593 40.741 0.00 0.00 42.00 2.24
2119 5065 8.957466 CGAATTGGAGTATCATAGTAGGTATCA 58.043 37.037 0.00 0.00 36.25 2.15
2122 5068 7.646548 TGGAGTATCATAGTAGGTATCATGC 57.353 40.000 0.00 0.00 36.25 4.06
2123 5069 7.182060 TGGAGTATCATAGTAGGTATCATGCA 58.818 38.462 0.00 0.00 36.25 3.96
2124 5070 7.841222 TGGAGTATCATAGTAGGTATCATGCAT 59.159 37.037 0.00 0.00 36.25 3.96
2125 5071 8.700051 GGAGTATCATAGTAGGTATCATGCATT 58.300 37.037 0.00 0.00 36.25 3.56
2126 5072 9.743057 GAGTATCATAGTAGGTATCATGCATTC 57.257 37.037 0.00 0.00 33.17 2.67
2127 5073 8.700051 AGTATCATAGTAGGTATCATGCATTCC 58.300 37.037 0.00 0.00 0.00 3.01
2128 5074 6.933514 TCATAGTAGGTATCATGCATTCCA 57.066 37.500 0.00 0.00 0.00 3.53
2129 5075 7.315066 TCATAGTAGGTATCATGCATTCCAA 57.685 36.000 0.00 0.00 0.00 3.53
2130 5076 7.921304 TCATAGTAGGTATCATGCATTCCAAT 58.079 34.615 0.00 0.00 0.00 3.16
2131 5077 8.385491 TCATAGTAGGTATCATGCATTCCAATT 58.615 33.333 0.00 0.00 0.00 2.32
2132 5078 9.671279 CATAGTAGGTATCATGCATTCCAATTA 57.329 33.333 0.00 0.00 0.00 1.40
2133 5079 7.986085 AGTAGGTATCATGCATTCCAATTAC 57.014 36.000 0.00 0.00 0.00 1.89
2134 5080 5.947228 AGGTATCATGCATTCCAATTACG 57.053 39.130 0.00 0.00 0.00 3.18
2135 5081 4.216257 AGGTATCATGCATTCCAATTACGC 59.784 41.667 0.00 0.00 0.00 4.42
2136 5082 4.023279 GGTATCATGCATTCCAATTACGCA 60.023 41.667 0.00 0.00 36.95 5.24
2137 5083 4.859304 ATCATGCATTCCAATTACGCAT 57.141 36.364 0.00 0.00 43.81 4.73
2138 5084 4.652421 TCATGCATTCCAATTACGCATT 57.348 36.364 0.00 0.00 41.19 3.56
2139 5085 5.008619 TCATGCATTCCAATTACGCATTT 57.991 34.783 0.00 0.00 41.19 2.32
2140 5086 5.417811 TCATGCATTCCAATTACGCATTTT 58.582 33.333 0.00 0.00 41.19 1.82
2141 5087 5.873712 TCATGCATTCCAATTACGCATTTTT 59.126 32.000 0.00 0.00 41.19 1.94
2142 5088 7.038048 TCATGCATTCCAATTACGCATTTTTA 58.962 30.769 0.00 0.00 41.19 1.52
2143 5089 7.710044 TCATGCATTCCAATTACGCATTTTTAT 59.290 29.630 0.00 0.00 41.19 1.40
2144 5090 7.231705 TGCATTCCAATTACGCATTTTTATG 57.768 32.000 0.00 0.00 0.00 1.90
2145 5091 7.038048 TGCATTCCAATTACGCATTTTTATGA 58.962 30.769 0.00 0.00 0.00 2.15
2146 5092 7.222417 TGCATTCCAATTACGCATTTTTATGAG 59.778 33.333 0.00 0.00 0.00 2.90
2147 5093 7.434897 GCATTCCAATTACGCATTTTTATGAGA 59.565 33.333 0.00 0.00 0.00 3.27
2148 5094 9.467258 CATTCCAATTACGCATTTTTATGAGAT 57.533 29.630 0.00 0.00 0.00 2.75
2149 5095 8.854979 TTCCAATTACGCATTTTTATGAGATG 57.145 30.769 0.00 0.00 0.00 2.90
2150 5096 7.424803 TCCAATTACGCATTTTTATGAGATGG 58.575 34.615 0.00 0.00 0.00 3.51
2151 5097 7.068103 TCCAATTACGCATTTTTATGAGATGGT 59.932 33.333 0.00 0.00 0.00 3.55
2152 5098 8.349245 CCAATTACGCATTTTTATGAGATGGTA 58.651 33.333 0.00 0.00 0.00 3.25
2153 5099 9.169468 CAATTACGCATTTTTATGAGATGGTAC 57.831 33.333 0.00 0.00 0.00 3.34
2174 5120 9.238368 TGGTACACAATTAAATAGGAAGGAAAG 57.762 33.333 0.00 0.00 0.00 2.62
2175 5121 8.683615 GGTACACAATTAAATAGGAAGGAAAGG 58.316 37.037 0.00 0.00 0.00 3.11
2176 5122 9.457436 GTACACAATTAAATAGGAAGGAAAGGA 57.543 33.333 0.00 0.00 0.00 3.36
2178 5124 9.547279 ACACAATTAAATAGGAAGGAAAGGATT 57.453 29.630 0.00 0.00 0.00 3.01
2179 5125 9.807649 CACAATTAAATAGGAAGGAAAGGATTG 57.192 33.333 0.00 0.00 0.00 2.67
2180 5126 9.768215 ACAATTAAATAGGAAGGAAAGGATTGA 57.232 29.630 0.00 0.00 0.00 2.57
2182 5128 9.997172 AATTAAATAGGAAGGAAAGGATTGAGT 57.003 29.630 0.00 0.00 0.00 3.41
2204 5150 9.862149 TGAGTATCATGATATATGGTACCGTAT 57.138 33.333 26.18 26.18 42.56 3.06
2206 5152 9.862149 AGTATCATGATATATGGTACCGTATCA 57.138 33.333 26.61 25.46 36.53 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.974099 TGTTCCTTCTACCTTTTCCGGA 59.026 45.455 0.00 0.00 0.00 5.14
26 27 2.742589 CGCTGTTCCTTCTACCTTTTCC 59.257 50.000 0.00 0.00 0.00 3.13
31 32 1.349067 AACCGCTGTTCCTTCTACCT 58.651 50.000 0.00 0.00 0.00 3.08
33 34 1.804748 CCAAACCGCTGTTCCTTCTAC 59.195 52.381 0.00 0.00 32.15 2.59
34 35 1.271163 CCCAAACCGCTGTTCCTTCTA 60.271 52.381 0.00 0.00 32.15 2.10
35 36 0.537371 CCCAAACCGCTGTTCCTTCT 60.537 55.000 0.00 0.00 32.15 2.85
36 37 1.524008 CCCCAAACCGCTGTTCCTTC 61.524 60.000 0.00 0.00 32.15 3.46
38 39 1.789576 ATCCCCAAACCGCTGTTCCT 61.790 55.000 0.00 0.00 32.15 3.36
135 136 2.202236 ATTCCATGGCGCAGGTGACT 62.202 55.000 10.83 0.00 46.44 3.41
168 169 5.105228 TCAGCATCACTAGAACATGATCACA 60.105 40.000 0.00 0.00 33.18 3.58
203 204 0.883833 AAAGCTCAACATGCCTTCCG 59.116 50.000 0.00 0.00 0.00 4.30
215 216 1.302511 GGCCAAGACCGAAAGCTCA 60.303 57.895 0.00 0.00 0.00 4.26
244 245 8.744652 TCTAGAAGAAACACAAAAACAAATGGA 58.255 29.630 0.00 0.00 0.00 3.41
282 283 4.511454 TCAGCATCACTATTGAATAACGCC 59.489 41.667 0.00 0.00 34.61 5.68
295 296 7.550196 AGAAAACAAAACAAAATCAGCATCACT 59.450 29.630 0.00 0.00 0.00 3.41
297 298 7.765360 AGAGAAAACAAAACAAAATCAGCATCA 59.235 29.630 0.00 0.00 0.00 3.07
299 300 7.550196 ACAGAGAAAACAAAACAAAATCAGCAT 59.450 29.630 0.00 0.00 0.00 3.79
300 301 6.873076 ACAGAGAAAACAAAACAAAATCAGCA 59.127 30.769 0.00 0.00 0.00 4.41
302 303 8.464770 TGACAGAGAAAACAAAACAAAATCAG 57.535 30.769 0.00 0.00 0.00 2.90
303 304 9.086336 GATGACAGAGAAAACAAAACAAAATCA 57.914 29.630 0.00 0.00 0.00 2.57
305 306 7.973388 TCGATGACAGAGAAAACAAAACAAAAT 59.027 29.630 0.00 0.00 0.00 1.82
306 307 7.309177 TCGATGACAGAGAAAACAAAACAAAA 58.691 30.769 0.00 0.00 0.00 2.44
308 309 6.093495 ACTCGATGACAGAGAAAACAAAACAA 59.907 34.615 0.00 0.00 38.97 2.83
323 481 3.494626 GTCTTCTTTTGCACTCGATGACA 59.505 43.478 14.33 0.00 33.39 3.58
347 505 3.000925 CCGTTACTTGGATATGTTCACGC 59.999 47.826 0.00 0.00 0.00 5.34
351 509 3.800506 CGGTCCGTTACTTGGATATGTTC 59.199 47.826 2.08 0.00 37.93 3.18
354 512 3.720949 TCGGTCCGTTACTTGGATATG 57.279 47.619 11.88 0.00 37.93 1.78
516 3232 2.360350 CTTGTCATGCGTGGCCCT 60.360 61.111 8.30 0.00 0.00 5.19
532 3248 8.970020 TGAGGATAACATTATGAATTTTGTGCT 58.030 29.630 0.00 0.00 0.00 4.40
533 3249 9.754382 ATGAGGATAACATTATGAATTTTGTGC 57.246 29.630 0.00 0.00 0.00 4.57
579 3295 9.599866 CAAGTCAAGATGTACTTTGTGGATATA 57.400 33.333 0.00 0.00 36.61 0.86
580 3296 8.103305 ACAAGTCAAGATGTACTTTGTGGATAT 58.897 33.333 0.00 0.00 36.61 1.63
581 3297 7.450074 ACAAGTCAAGATGTACTTTGTGGATA 58.550 34.615 0.00 0.00 36.61 2.59
623 3339 4.386312 CCCATGTAGGTGGTGGATAACATT 60.386 45.833 0.00 0.00 37.57 2.71
638 3354 4.119862 CGACAATACAAGTCCCCATGTAG 58.880 47.826 0.00 0.00 35.64 2.74
644 3360 2.081462 CAACCGACAATACAAGTCCCC 58.919 52.381 0.00 0.00 32.41 4.81
646 3362 6.920569 ATATTCAACCGACAATACAAGTCC 57.079 37.500 0.00 0.00 32.41 3.85
669 3385 2.159014 ACTCGCGGCAAGGATAACATAA 60.159 45.455 6.13 0.00 0.00 1.90
681 3397 1.746787 TCTACTATTCAACTCGCGGCA 59.253 47.619 6.13 0.00 0.00 5.69
683 3399 4.030134 AGTTCTACTATTCAACTCGCGG 57.970 45.455 6.13 0.00 0.00 6.46
686 3402 7.968956 ACATGTGTAGTTCTACTATTCAACTCG 59.031 37.037 0.00 0.00 32.65 4.18
710 3426 5.435686 ACTAGCCATCTGTAAATTCCACA 57.564 39.130 0.00 0.00 0.00 4.17
764 3480 2.815211 CGGTGTGATGCCGGTGAG 60.815 66.667 1.90 0.00 44.98 3.51
814 3579 4.445718 CCGATCGAGTAGGAAAATGATGTG 59.554 45.833 18.66 0.00 0.00 3.21
815 3580 4.099573 ACCGATCGAGTAGGAAAATGATGT 59.900 41.667 18.66 0.00 0.00 3.06
817 3582 4.872664 GACCGATCGAGTAGGAAAATGAT 58.127 43.478 18.66 0.00 0.00 2.45
818 3583 4.303086 GACCGATCGAGTAGGAAAATGA 57.697 45.455 18.66 0.00 0.00 2.57
837 3617 6.647212 TCTGATTGTGTTGTATTGATCGAC 57.353 37.500 0.00 0.00 0.00 4.20
859 3639 6.979238 AGGAACGATGCTACTTACAAGTAATC 59.021 38.462 3.59 4.21 40.70 1.75
866 3646 2.418197 GCCAGGAACGATGCTACTTACA 60.418 50.000 0.00 0.00 0.00 2.41
899 3793 0.676736 ATCTAGGCTGGAGCGTTAGC 59.323 55.000 6.73 1.22 43.26 3.09
900 3794 3.460857 AAATCTAGGCTGGAGCGTTAG 57.539 47.619 6.73 1.46 43.26 2.34
901 3795 4.690122 GTTAAATCTAGGCTGGAGCGTTA 58.310 43.478 6.73 2.46 43.26 3.18
902 3796 3.532542 GTTAAATCTAGGCTGGAGCGTT 58.467 45.455 6.73 3.39 43.26 4.84
905 3803 2.158943 ACCGTTAAATCTAGGCTGGAGC 60.159 50.000 6.73 0.00 41.14 4.70
912 3810 5.068234 TGTGACTCACCGTTAAATCTAGG 57.932 43.478 6.72 0.00 32.73 3.02
938 3837 7.554118 AGATTTCTCAAGAAAACAGAGACACAA 59.446 33.333 9.11 0.00 45.81 3.33
939 3838 7.050377 AGATTTCTCAAGAAAACAGAGACACA 58.950 34.615 9.11 0.00 45.81 3.72
943 3844 8.778358 GCTAAAGATTTCTCAAGAAAACAGAGA 58.222 33.333 9.11 0.00 45.81 3.10
948 3849 7.596621 CCAAGGCTAAAGATTTCTCAAGAAAAC 59.403 37.037 9.11 6.92 45.81 2.43
978 3879 2.155155 CGCGTTACCAAGACAGAAGTTC 59.845 50.000 0.00 0.00 0.00 3.01
995 3896 1.361993 GAGGAGCTCATCATCGCGT 59.638 57.895 22.87 0.00 0.00 6.01
1001 3902 0.532573 GTTGTCGGAGGAGCTCATCA 59.467 55.000 27.91 7.51 31.08 3.07
1042 3943 2.203437 AACAACTTCCGGCCACCC 60.203 61.111 2.24 0.00 0.00 4.61
1053 3954 0.179166 CAGCGCACAACACAACAACT 60.179 50.000 11.47 0.00 0.00 3.16
1059 3960 0.657312 CTTCTTCAGCGCACAACACA 59.343 50.000 11.47 0.00 0.00 3.72
1061 3962 1.648720 GCTTCTTCAGCGCACAACA 59.351 52.632 11.47 0.00 39.29 3.33
1107 4008 1.447663 CACCATGATGTCGGCGTCA 60.448 57.895 15.35 15.35 43.89 4.35
1113 4014 1.524621 GGGGAGCACCATGATGTCG 60.525 63.158 1.58 0.00 42.91 4.35
1122 4023 4.139234 GTACCGACGGGGAGCACC 62.139 72.222 20.00 0.00 39.97 5.01
1144 4085 0.329596 GGCCTGAAGTCCTTGGTCAT 59.670 55.000 0.00 0.00 0.00 3.06
1146 4087 1.002011 GGGCCTGAAGTCCTTGGTC 60.002 63.158 0.84 0.00 0.00 4.02
1164 4105 3.996744 GAAGACGAGGACGCGGTCG 62.997 68.421 21.38 21.38 43.96 4.79
1167 4108 3.996744 GACGAAGACGAGGACGCGG 62.997 68.421 12.47 0.00 43.96 6.46
1197 4138 2.350895 CCGATGCTTGGGGTGTCA 59.649 61.111 0.00 0.00 0.00 3.58
1277 4222 3.493334 CCATGACATGGTAATGCTCCAT 58.507 45.455 24.15 0.00 45.54 3.41
1307 4252 2.869801 CACGCCTGACACAACTAAAGAA 59.130 45.455 0.00 0.00 0.00 2.52
1309 4254 2.210116 ACACGCCTGACACAACTAAAG 58.790 47.619 0.00 0.00 0.00 1.85
1319 4265 3.250040 AGTGAATAACAAACACGCCTGAC 59.750 43.478 0.00 0.00 39.19 3.51
1321 4267 3.896648 AGTGAATAACAAACACGCCTG 57.103 42.857 0.00 0.00 39.19 4.85
1322 4268 5.001232 ACATAGTGAATAACAAACACGCCT 58.999 37.500 0.00 0.00 39.19 5.52
1343 4289 6.513806 CATGGGAGATACATGTTTTTGACA 57.486 37.500 2.30 0.00 43.71 3.58
1355 4301 8.627208 ATTGTAATCATTCACATGGGAGATAC 57.373 34.615 0.00 0.00 0.00 2.24
1357 4303 9.071276 GTTATTGTAATCATTCACATGGGAGAT 57.929 33.333 0.00 0.00 0.00 2.75
1365 4311 9.112725 CATCAGGAGTTATTGTAATCATTCACA 57.887 33.333 0.00 0.00 0.00 3.58
1368 4314 9.941664 CAACATCAGGAGTTATTGTAATCATTC 57.058 33.333 0.00 0.00 0.00 2.67
1369 4315 9.685276 TCAACATCAGGAGTTATTGTAATCATT 57.315 29.630 0.00 0.00 0.00 2.57
1370 4316 9.685276 TTCAACATCAGGAGTTATTGTAATCAT 57.315 29.630 0.00 0.00 0.00 2.45
1371 4317 9.513906 TTTCAACATCAGGAGTTATTGTAATCA 57.486 29.630 0.00 0.00 0.00 2.57
1374 4320 9.513906 TGATTTCAACATCAGGAGTTATTGTAA 57.486 29.630 0.00 0.00 0.00 2.41
1375 4321 9.166173 CTGATTTCAACATCAGGAGTTATTGTA 57.834 33.333 3.17 0.00 44.57 2.41
1376 4322 8.048534 CTGATTTCAACATCAGGAGTTATTGT 57.951 34.615 3.17 0.00 44.57 2.71
1387 4333 6.014242 AGGAGTACAGTCTGATTTCAACATCA 60.014 38.462 6.91 0.00 0.00 3.07
1388 4334 6.402222 AGGAGTACAGTCTGATTTCAACATC 58.598 40.000 6.91 0.00 0.00 3.06
1389 4335 6.365970 AGGAGTACAGTCTGATTTCAACAT 57.634 37.500 6.91 0.00 0.00 2.71
1390 4336 5.808366 AGGAGTACAGTCTGATTTCAACA 57.192 39.130 6.91 0.00 0.00 3.33
1391 4337 6.688578 TGTAGGAGTACAGTCTGATTTCAAC 58.311 40.000 6.91 4.14 34.02 3.18
1392 4338 6.911250 TGTAGGAGTACAGTCTGATTTCAA 57.089 37.500 6.91 0.00 34.02 2.69
1393 4339 6.911250 TTGTAGGAGTACAGTCTGATTTCA 57.089 37.500 6.91 0.00 40.33 2.69
1394 4340 8.496751 GTTTTTGTAGGAGTACAGTCTGATTTC 58.503 37.037 6.91 0.63 40.33 2.17
1395 4341 8.211629 AGTTTTTGTAGGAGTACAGTCTGATTT 58.788 33.333 6.91 0.00 40.33 2.17
1396 4342 7.736893 AGTTTTTGTAGGAGTACAGTCTGATT 58.263 34.615 6.91 0.00 40.33 2.57
1397 4343 7.304497 AGTTTTTGTAGGAGTACAGTCTGAT 57.696 36.000 6.91 0.00 40.33 2.90
1398 4344 6.726490 AGTTTTTGTAGGAGTACAGTCTGA 57.274 37.500 6.91 0.00 40.33 3.27
1399 4345 8.882415 TTAAGTTTTTGTAGGAGTACAGTCTG 57.118 34.615 0.00 0.00 40.33 3.51
1400 4346 9.895138 TTTTAAGTTTTTGTAGGAGTACAGTCT 57.105 29.630 0.00 0.00 40.33 3.24
1429 4375 9.012161 GGGTACTCTAGACTTTTCATATACGAT 57.988 37.037 0.00 0.00 0.00 3.73
1430 4376 8.216423 AGGGTACTCTAGACTTTTCATATACGA 58.784 37.037 0.00 0.00 0.00 3.43
1431 4377 8.393671 AGGGTACTCTAGACTTTTCATATACG 57.606 38.462 0.00 0.00 0.00 3.06
1432 4378 9.968870 CAAGGGTACTCTAGACTTTTCATATAC 57.031 37.037 0.00 0.00 0.00 1.47
1433 4379 9.931698 TCAAGGGTACTCTAGACTTTTCATATA 57.068 33.333 0.00 0.00 0.00 0.86
1434 4380 8.840200 TCAAGGGTACTCTAGACTTTTCATAT 57.160 34.615 0.00 0.00 0.00 1.78
1435 4381 8.840200 ATCAAGGGTACTCTAGACTTTTCATA 57.160 34.615 0.00 0.00 0.00 2.15
1436 4382 7.741554 ATCAAGGGTACTCTAGACTTTTCAT 57.258 36.000 0.00 0.00 0.00 2.57
1437 4383 7.554959 AATCAAGGGTACTCTAGACTTTTCA 57.445 36.000 0.00 0.00 0.00 2.69
1438 4384 8.850007 AAAATCAAGGGTACTCTAGACTTTTC 57.150 34.615 0.00 0.00 0.00 2.29
1439 4385 9.286170 GAAAAATCAAGGGTACTCTAGACTTTT 57.714 33.333 0.00 0.54 0.00 2.27
1440 4386 8.661345 AGAAAAATCAAGGGTACTCTAGACTTT 58.339 33.333 0.00 0.00 0.00 2.66
1441 4387 8.208575 AGAAAAATCAAGGGTACTCTAGACTT 57.791 34.615 0.00 0.00 0.00 3.01
1442 4388 7.676468 AGAGAAAAATCAAGGGTACTCTAGACT 59.324 37.037 0.00 0.00 32.80 3.24
1443 4389 7.842982 AGAGAAAAATCAAGGGTACTCTAGAC 58.157 38.462 0.00 0.00 32.80 2.59
1444 4390 8.437274 AAGAGAAAAATCAAGGGTACTCTAGA 57.563 34.615 0.00 0.00 33.92 2.43
1483 4429 9.762381 ACATTTTTACCTATCAAGAATGGGTTA 57.238 29.630 0.00 0.00 46.47 2.85
1484 4430 8.664669 ACATTTTTACCTATCAAGAATGGGTT 57.335 30.769 0.00 0.00 46.47 4.11
1493 4439 9.111613 CGGGTACATAACATTTTTACCTATCAA 57.888 33.333 0.00 0.00 33.90 2.57
1494 4440 8.266473 ACGGGTACATAACATTTTTACCTATCA 58.734 33.333 0.00 0.00 33.90 2.15
1495 4441 8.667076 ACGGGTACATAACATTTTTACCTATC 57.333 34.615 0.00 0.00 33.90 2.08
1496 4442 9.112725 GAACGGGTACATAACATTTTTACCTAT 57.887 33.333 0.00 0.00 33.90 2.57
1497 4443 8.320617 AGAACGGGTACATAACATTTTTACCTA 58.679 33.333 0.00 0.00 33.90 3.08
1498 4444 7.170277 AGAACGGGTACATAACATTTTTACCT 58.830 34.615 0.00 0.00 33.90 3.08
1499 4445 7.381766 AGAACGGGTACATAACATTTTTACC 57.618 36.000 0.00 0.00 32.81 2.85
1502 4448 9.849166 CAAATAGAACGGGTACATAACATTTTT 57.151 29.630 0.00 0.00 0.00 1.94
1503 4449 9.233649 TCAAATAGAACGGGTACATAACATTTT 57.766 29.630 0.00 0.00 0.00 1.82
1504 4450 8.671028 GTCAAATAGAACGGGTACATAACATTT 58.329 33.333 0.00 0.00 0.00 2.32
1505 4451 7.281549 GGTCAAATAGAACGGGTACATAACATT 59.718 37.037 0.00 0.00 0.00 2.71
1506 4452 6.764560 GGTCAAATAGAACGGGTACATAACAT 59.235 38.462 0.00 0.00 0.00 2.71
1507 4453 6.108015 GGTCAAATAGAACGGGTACATAACA 58.892 40.000 0.00 0.00 0.00 2.41
1508 4454 6.108015 TGGTCAAATAGAACGGGTACATAAC 58.892 40.000 0.00 0.00 36.45 1.89
1509 4455 6.297080 TGGTCAAATAGAACGGGTACATAA 57.703 37.500 0.00 0.00 36.45 1.90
1510 4456 5.936187 TGGTCAAATAGAACGGGTACATA 57.064 39.130 0.00 0.00 36.45 2.29
1511 4457 4.829872 TGGTCAAATAGAACGGGTACAT 57.170 40.909 0.00 0.00 36.45 2.29
1512 4458 4.620589 TTGGTCAAATAGAACGGGTACA 57.379 40.909 0.00 0.00 36.45 2.90
1513 4459 6.505044 AATTTGGTCAAATAGAACGGGTAC 57.495 37.500 9.06 0.00 39.88 3.34
1514 4460 8.810990 ATAAATTTGGTCAAATAGAACGGGTA 57.189 30.769 9.06 0.00 39.88 3.69
1515 4461 7.712204 ATAAATTTGGTCAAATAGAACGGGT 57.288 32.000 9.06 0.00 39.88 5.28
1516 4462 9.893305 GATATAAATTTGGTCAAATAGAACGGG 57.107 33.333 9.06 0.00 39.88 5.28
1687 4633 9.238368 TCCTCGGTTTCAAAATACTTTCATATT 57.762 29.630 0.00 0.00 0.00 1.28
1688 4634 8.801882 TCCTCGGTTTCAAAATACTTTCATAT 57.198 30.769 0.00 0.00 0.00 1.78
1689 4635 8.801882 ATCCTCGGTTTCAAAATACTTTCATA 57.198 30.769 0.00 0.00 0.00 2.15
1690 4636 7.703058 ATCCTCGGTTTCAAAATACTTTCAT 57.297 32.000 0.00 0.00 0.00 2.57
1691 4637 7.519032 AATCCTCGGTTTCAAAATACTTTCA 57.481 32.000 0.00 0.00 0.00 2.69
1692 4638 8.727910 ACTAATCCTCGGTTTCAAAATACTTTC 58.272 33.333 0.00 0.00 0.00 2.62
1693 4639 8.631480 ACTAATCCTCGGTTTCAAAATACTTT 57.369 30.769 0.00 0.00 0.00 2.66
1694 4640 8.512138 CAACTAATCCTCGGTTTCAAAATACTT 58.488 33.333 0.00 0.00 0.00 2.24
1695 4641 7.361799 GCAACTAATCCTCGGTTTCAAAATACT 60.362 37.037 0.00 0.00 0.00 2.12
1696 4642 6.745907 GCAACTAATCCTCGGTTTCAAAATAC 59.254 38.462 0.00 0.00 0.00 1.89
1697 4643 6.431543 TGCAACTAATCCTCGGTTTCAAAATA 59.568 34.615 0.00 0.00 0.00 1.40
1698 4644 5.242838 TGCAACTAATCCTCGGTTTCAAAAT 59.757 36.000 0.00 0.00 0.00 1.82
1699 4645 4.580995 TGCAACTAATCCTCGGTTTCAAAA 59.419 37.500 0.00 0.00 0.00 2.44
1700 4646 4.138290 TGCAACTAATCCTCGGTTTCAAA 58.862 39.130 0.00 0.00 0.00 2.69
1701 4647 3.745799 TGCAACTAATCCTCGGTTTCAA 58.254 40.909 0.00 0.00 0.00 2.69
1702 4648 3.410631 TGCAACTAATCCTCGGTTTCA 57.589 42.857 0.00 0.00 0.00 2.69
1703 4649 4.759516 TTTGCAACTAATCCTCGGTTTC 57.240 40.909 0.00 0.00 0.00 2.78
1704 4650 5.722021 ATTTTGCAACTAATCCTCGGTTT 57.278 34.783 0.00 0.00 0.00 3.27
1705 4651 5.722021 AATTTTGCAACTAATCCTCGGTT 57.278 34.783 0.00 0.00 0.00 4.44
1706 4652 5.708230 TGTAATTTTGCAACTAATCCTCGGT 59.292 36.000 0.00 0.00 0.00 4.69
1707 4653 6.027749 GTGTAATTTTGCAACTAATCCTCGG 58.972 40.000 0.00 0.00 0.00 4.63
1708 4654 6.523201 GTGTGTAATTTTGCAACTAATCCTCG 59.477 38.462 0.00 0.00 0.00 4.63
1709 4655 6.806739 GGTGTGTAATTTTGCAACTAATCCTC 59.193 38.462 0.00 0.00 0.00 3.71
1710 4656 6.295067 GGGTGTGTAATTTTGCAACTAATCCT 60.295 38.462 0.00 0.00 0.00 3.24
1711 4657 5.867174 GGGTGTGTAATTTTGCAACTAATCC 59.133 40.000 0.00 0.00 0.00 3.01
1712 4658 6.687604 AGGGTGTGTAATTTTGCAACTAATC 58.312 36.000 0.00 0.00 0.00 1.75
1713 4659 6.664428 AGGGTGTGTAATTTTGCAACTAAT 57.336 33.333 0.00 0.00 0.00 1.73
1714 4660 6.276847 CAAGGGTGTGTAATTTTGCAACTAA 58.723 36.000 0.00 0.00 0.00 2.24
1715 4661 5.221342 CCAAGGGTGTGTAATTTTGCAACTA 60.221 40.000 0.00 0.00 0.00 2.24
1716 4662 4.442753 CCAAGGGTGTGTAATTTTGCAACT 60.443 41.667 0.00 0.00 0.00 3.16
1717 4663 3.807071 CCAAGGGTGTGTAATTTTGCAAC 59.193 43.478 0.00 0.00 0.00 4.17
1718 4664 3.742640 GCCAAGGGTGTGTAATTTTGCAA 60.743 43.478 0.00 0.00 0.00 4.08
1719 4665 2.224161 GCCAAGGGTGTGTAATTTTGCA 60.224 45.455 0.00 0.00 0.00 4.08
1720 4666 2.037121 AGCCAAGGGTGTGTAATTTTGC 59.963 45.455 0.00 0.00 0.00 3.68
1721 4667 4.057432 CAAGCCAAGGGTGTGTAATTTTG 58.943 43.478 0.00 0.00 0.00 2.44
1722 4668 3.964031 TCAAGCCAAGGGTGTGTAATTTT 59.036 39.130 0.00 0.00 0.00 1.82
1723 4669 3.571590 TCAAGCCAAGGGTGTGTAATTT 58.428 40.909 0.00 0.00 0.00 1.82
1724 4670 3.237268 TCAAGCCAAGGGTGTGTAATT 57.763 42.857 0.00 0.00 0.00 1.40
1725 4671 2.969821 TCAAGCCAAGGGTGTGTAAT 57.030 45.000 0.00 0.00 0.00 1.89
1726 4672 2.969821 ATCAAGCCAAGGGTGTGTAA 57.030 45.000 0.00 0.00 0.00 2.41
1727 4673 2.969821 AATCAAGCCAAGGGTGTGTA 57.030 45.000 0.00 0.00 0.00 2.90
1728 4674 2.086610 AAATCAAGCCAAGGGTGTGT 57.913 45.000 0.00 0.00 0.00 3.72
1729 4675 4.806640 AATAAATCAAGCCAAGGGTGTG 57.193 40.909 0.00 0.00 0.00 3.82
1730 4676 5.823861 AAAATAAATCAAGCCAAGGGTGT 57.176 34.783 0.00 0.00 0.00 4.16
1731 4677 6.935167 AGTAAAATAAATCAAGCCAAGGGTG 58.065 36.000 0.00 0.00 0.00 4.61
1732 4678 7.386059 CAAGTAAAATAAATCAAGCCAAGGGT 58.614 34.615 0.00 0.00 0.00 4.34
1733 4679 6.818142 CCAAGTAAAATAAATCAAGCCAAGGG 59.182 38.462 0.00 0.00 0.00 3.95
1734 4680 7.610865 TCCAAGTAAAATAAATCAAGCCAAGG 58.389 34.615 0.00 0.00 0.00 3.61
1735 4681 9.487790 TTTCCAAGTAAAATAAATCAAGCCAAG 57.512 29.630 0.00 0.00 0.00 3.61
1736 4682 9.838339 TTTTCCAAGTAAAATAAATCAAGCCAA 57.162 25.926 0.00 0.00 0.00 4.52
1737 4683 9.487790 CTTTTCCAAGTAAAATAAATCAAGCCA 57.512 29.630 0.00 0.00 0.00 4.75
1738 4684 8.935844 CCTTTTCCAAGTAAAATAAATCAAGCC 58.064 33.333 0.00 0.00 0.00 4.35
1739 4685 9.489084 ACCTTTTCCAAGTAAAATAAATCAAGC 57.511 29.630 0.00 0.00 0.00 4.01
1742 4688 9.974980 GTCACCTTTTCCAAGTAAAATAAATCA 57.025 29.630 0.00 0.00 0.00 2.57
1743 4689 9.124807 CGTCACCTTTTCCAAGTAAAATAAATC 57.875 33.333 0.00 0.00 0.00 2.17
1744 4690 8.635328 ACGTCACCTTTTCCAAGTAAAATAAAT 58.365 29.630 0.00 0.00 0.00 1.40
1745 4691 7.998580 ACGTCACCTTTTCCAAGTAAAATAAA 58.001 30.769 0.00 0.00 0.00 1.40
1746 4692 7.571080 ACGTCACCTTTTCCAAGTAAAATAA 57.429 32.000 0.00 0.00 0.00 1.40
1747 4693 7.571080 AACGTCACCTTTTCCAAGTAAAATA 57.429 32.000 0.00 0.00 0.00 1.40
1748 4694 6.459670 AACGTCACCTTTTCCAAGTAAAAT 57.540 33.333 0.00 0.00 0.00 1.82
1749 4695 5.900865 AACGTCACCTTTTCCAAGTAAAA 57.099 34.783 0.00 0.00 0.00 1.52
1750 4696 6.038492 CCTTAACGTCACCTTTTCCAAGTAAA 59.962 38.462 0.00 0.00 0.00 2.01
1751 4697 5.528320 CCTTAACGTCACCTTTTCCAAGTAA 59.472 40.000 0.00 0.00 0.00 2.24
1752 4698 5.058490 CCTTAACGTCACCTTTTCCAAGTA 58.942 41.667 0.00 0.00 0.00 2.24
1753 4699 3.881089 CCTTAACGTCACCTTTTCCAAGT 59.119 43.478 0.00 0.00 0.00 3.16
1754 4700 3.881089 ACCTTAACGTCACCTTTTCCAAG 59.119 43.478 0.00 0.00 0.00 3.61
1755 4701 3.888583 ACCTTAACGTCACCTTTTCCAA 58.111 40.909 0.00 0.00 0.00 3.53
1756 4702 3.564053 ACCTTAACGTCACCTTTTCCA 57.436 42.857 0.00 0.00 0.00 3.53
1757 4703 4.336153 TGAAACCTTAACGTCACCTTTTCC 59.664 41.667 0.00 0.00 0.00 3.13
1758 4704 5.163733 TGTGAAACCTTAACGTCACCTTTTC 60.164 40.000 0.00 0.00 39.72 2.29
1759 4705 4.701171 TGTGAAACCTTAACGTCACCTTTT 59.299 37.500 0.00 0.00 39.72 2.27
1760 4706 4.263435 TGTGAAACCTTAACGTCACCTTT 58.737 39.130 0.00 0.00 39.72 3.11
1761 4707 3.876341 TGTGAAACCTTAACGTCACCTT 58.124 40.909 0.00 0.00 39.72 3.50
1762 4708 3.547054 TGTGAAACCTTAACGTCACCT 57.453 42.857 0.00 0.00 39.72 4.00
1763 4709 3.374678 TGTTGTGAAACCTTAACGTCACC 59.625 43.478 0.00 0.00 39.72 4.02
1764 4710 4.603231 TGTTGTGAAACCTTAACGTCAC 57.397 40.909 0.00 0.00 40.64 3.67
1765 4711 4.696402 AGTTGTTGTGAAACCTTAACGTCA 59.304 37.500 0.00 0.00 34.36 4.35
1766 4712 5.225899 AGTTGTTGTGAAACCTTAACGTC 57.774 39.130 0.00 0.00 34.36 4.34
1767 4713 6.930667 ATAGTTGTTGTGAAACCTTAACGT 57.069 33.333 0.00 0.00 34.36 3.99
1768 4714 8.767085 TCTTATAGTTGTTGTGAAACCTTAACG 58.233 33.333 0.00 0.00 34.36 3.18
1803 4749 9.613428 CACACTGATAGAAGTATAATTTGGGAA 57.387 33.333 0.00 0.00 0.00 3.97
1804 4750 8.210946 CCACACTGATAGAAGTATAATTTGGGA 58.789 37.037 0.00 0.00 0.00 4.37
1805 4751 7.993183 ACCACACTGATAGAAGTATAATTTGGG 59.007 37.037 0.00 0.00 0.00 4.12
1806 4752 8.830580 CACCACACTGATAGAAGTATAATTTGG 58.169 37.037 0.00 0.00 0.00 3.28
1807 4753 9.383519 ACACCACACTGATAGAAGTATAATTTG 57.616 33.333 0.00 0.00 0.00 2.32
1808 4754 9.601217 GACACCACACTGATAGAAGTATAATTT 57.399 33.333 0.00 0.00 0.00 1.82
1809 4755 8.758829 TGACACCACACTGATAGAAGTATAATT 58.241 33.333 0.00 0.00 0.00 1.40
1810 4756 8.306313 TGACACCACACTGATAGAAGTATAAT 57.694 34.615 0.00 0.00 0.00 1.28
1811 4757 7.712204 TGACACCACACTGATAGAAGTATAA 57.288 36.000 0.00 0.00 0.00 0.98
1812 4758 7.712204 TTGACACCACACTGATAGAAGTATA 57.288 36.000 0.00 0.00 0.00 1.47
1813 4759 6.605471 TTGACACCACACTGATAGAAGTAT 57.395 37.500 0.00 0.00 0.00 2.12
1814 4760 6.210584 TCATTGACACCACACTGATAGAAGTA 59.789 38.462 0.00 0.00 0.00 2.24
1815 4761 4.955811 TTGACACCACACTGATAGAAGT 57.044 40.909 0.00 0.00 0.00 3.01
1816 4762 5.349817 GTCATTGACACCACACTGATAGAAG 59.650 44.000 11.93 0.00 33.46 2.85
1817 4763 5.221621 TGTCATTGACACCACACTGATAGAA 60.222 40.000 15.41 0.00 37.67 2.10
1818 4764 4.283212 TGTCATTGACACCACACTGATAGA 59.717 41.667 15.41 0.00 37.67 1.98
1819 4765 4.568956 TGTCATTGACACCACACTGATAG 58.431 43.478 15.41 0.00 37.67 2.08
1820 4766 4.615588 TGTCATTGACACCACACTGATA 57.384 40.909 15.41 0.00 37.67 2.15
1821 4767 3.490439 TGTCATTGACACCACACTGAT 57.510 42.857 15.41 0.00 37.67 2.90
1822 4768 2.998316 TGTCATTGACACCACACTGA 57.002 45.000 15.41 0.00 37.67 3.41
1865 4811 9.462174 GCGAAATGATTATCATGTAATTTCCAA 57.538 29.630 8.60 0.00 37.15 3.53
1866 4812 8.628280 TGCGAAATGATTATCATGTAATTTCCA 58.372 29.630 8.60 6.81 37.15 3.53
1867 4813 9.462174 TTGCGAAATGATTATCATGTAATTTCC 57.538 29.630 8.60 4.73 37.15 3.13
1959 4905 9.116067 TCGCTACTGCTAAAAATATGGTTTTAT 57.884 29.630 0.00 0.00 33.60 1.40
1960 4906 8.495361 TCGCTACTGCTAAAAATATGGTTTTA 57.505 30.769 0.00 0.00 36.97 1.52
1961 4907 7.335924 TCTCGCTACTGCTAAAAATATGGTTTT 59.664 33.333 0.00 0.00 36.97 2.43
1962 4908 6.821665 TCTCGCTACTGCTAAAAATATGGTTT 59.178 34.615 0.00 0.00 36.97 3.27
1963 4909 6.346096 TCTCGCTACTGCTAAAAATATGGTT 58.654 36.000 0.00 0.00 36.97 3.67
1964 4910 5.914033 TCTCGCTACTGCTAAAAATATGGT 58.086 37.500 0.00 0.00 36.97 3.55
1965 4911 7.201359 CGTATCTCGCTACTGCTAAAAATATGG 60.201 40.741 0.00 0.00 36.97 2.74
1966 4912 7.537649 TCGTATCTCGCTACTGCTAAAAATATG 59.462 37.037 0.00 0.00 39.67 1.78
1967 4913 7.591165 TCGTATCTCGCTACTGCTAAAAATAT 58.409 34.615 0.00 0.00 39.67 1.28
1968 4914 6.962686 TCGTATCTCGCTACTGCTAAAAATA 58.037 36.000 0.00 0.00 39.67 1.40
1969 4915 5.828747 TCGTATCTCGCTACTGCTAAAAAT 58.171 37.500 0.00 0.00 39.67 1.82
1970 4916 5.163683 ACTCGTATCTCGCTACTGCTAAAAA 60.164 40.000 0.00 0.00 39.67 1.94
1971 4917 4.334759 ACTCGTATCTCGCTACTGCTAAAA 59.665 41.667 0.00 0.00 39.67 1.52
1972 4918 3.875727 ACTCGTATCTCGCTACTGCTAAA 59.124 43.478 0.00 0.00 39.67 1.85
1973 4919 3.247886 CACTCGTATCTCGCTACTGCTAA 59.752 47.826 0.00 0.00 39.67 3.09
1974 4920 2.801111 CACTCGTATCTCGCTACTGCTA 59.199 50.000 0.00 0.00 39.67 3.49
1975 4921 1.600013 CACTCGTATCTCGCTACTGCT 59.400 52.381 0.00 0.00 39.67 4.24
1976 4922 1.922444 GCACTCGTATCTCGCTACTGC 60.922 57.143 0.00 0.00 39.67 4.40
1977 4923 1.334239 GGCACTCGTATCTCGCTACTG 60.334 57.143 0.00 0.00 39.67 2.74
1978 4924 0.945813 GGCACTCGTATCTCGCTACT 59.054 55.000 0.00 0.00 39.67 2.57
1979 4925 0.945813 AGGCACTCGTATCTCGCTAC 59.054 55.000 0.00 0.00 39.67 3.58
1980 4926 2.538512 TAGGCACTCGTATCTCGCTA 57.461 50.000 0.00 0.00 41.75 4.26
1981 4927 1.537638 CATAGGCACTCGTATCTCGCT 59.462 52.381 0.00 0.00 41.75 4.93
1982 4928 1.535896 TCATAGGCACTCGTATCTCGC 59.464 52.381 0.00 0.00 41.75 5.03
1983 4929 3.898517 TTCATAGGCACTCGTATCTCG 57.101 47.619 0.00 0.00 41.75 4.04
1984 4930 4.933330 TGTTTCATAGGCACTCGTATCTC 58.067 43.478 0.00 0.00 41.75 2.75
1985 4931 5.127194 TCTTGTTTCATAGGCACTCGTATCT 59.873 40.000 0.00 0.00 41.75 1.98
1986 4932 5.348986 TCTTGTTTCATAGGCACTCGTATC 58.651 41.667 0.00 0.00 41.75 2.24
1987 4933 5.339008 TCTTGTTTCATAGGCACTCGTAT 57.661 39.130 0.00 0.00 41.75 3.06
1988 4934 4.794278 TCTTGTTTCATAGGCACTCGTA 57.206 40.909 0.00 0.00 41.75 3.43
1989 4935 3.678056 TCTTGTTTCATAGGCACTCGT 57.322 42.857 0.00 0.00 41.75 4.18
1990 4936 6.258727 ACAATATCTTGTTTCATAGGCACTCG 59.741 38.462 0.00 0.00 43.05 4.18
1991 4937 7.559590 ACAATATCTTGTTTCATAGGCACTC 57.440 36.000 0.00 0.00 43.05 3.51
1992 4938 9.632638 AATACAATATCTTGTTTCATAGGCACT 57.367 29.630 1.42 0.00 43.05 4.40
2010 4956 7.973388 GCCATGCTCAGTTTGTTTAATACAATA 59.027 33.333 0.00 0.00 45.72 1.90
2011 4957 6.813152 GCCATGCTCAGTTTGTTTAATACAAT 59.187 34.615 0.00 0.00 45.72 2.71
2012 4958 6.015519 AGCCATGCTCAGTTTGTTTAATACAA 60.016 34.615 0.00 0.00 38.70 2.41
2013 4959 5.476599 AGCCATGCTCAGTTTGTTTAATACA 59.523 36.000 0.00 0.00 30.62 2.29
2014 4960 5.954335 AGCCATGCTCAGTTTGTTTAATAC 58.046 37.500 0.00 0.00 30.62 1.89
2015 4961 7.695480 TTAGCCATGCTCAGTTTGTTTAATA 57.305 32.000 0.00 0.00 40.44 0.98
2016 4962 6.588719 TTAGCCATGCTCAGTTTGTTTAAT 57.411 33.333 0.00 0.00 40.44 1.40
2017 4963 6.588719 ATTAGCCATGCTCAGTTTGTTTAA 57.411 33.333 0.00 0.00 40.44 1.52
2018 4964 6.884295 AGTATTAGCCATGCTCAGTTTGTTTA 59.116 34.615 0.00 0.00 40.44 2.01
2019 4965 5.711976 AGTATTAGCCATGCTCAGTTTGTTT 59.288 36.000 0.00 0.00 40.44 2.83
2020 4966 5.256474 AGTATTAGCCATGCTCAGTTTGTT 58.744 37.500 0.00 0.00 40.44 2.83
2021 4967 4.848357 AGTATTAGCCATGCTCAGTTTGT 58.152 39.130 0.00 0.00 40.44 2.83
2022 4968 7.875041 ACTATAGTATTAGCCATGCTCAGTTTG 59.125 37.037 2.75 0.00 40.44 2.93
2023 4969 7.967908 ACTATAGTATTAGCCATGCTCAGTTT 58.032 34.615 2.75 0.00 40.44 2.66
2024 4970 7.233553 TGACTATAGTATTAGCCATGCTCAGTT 59.766 37.037 5.09 0.00 40.44 3.16
2025 4971 6.721668 TGACTATAGTATTAGCCATGCTCAGT 59.278 38.462 5.09 0.00 40.44 3.41
2026 4972 7.032580 GTGACTATAGTATTAGCCATGCTCAG 58.967 42.308 5.09 0.00 40.44 3.35
2027 4973 6.721668 AGTGACTATAGTATTAGCCATGCTCA 59.278 38.462 5.09 0.00 40.44 4.26
2028 4974 7.164230 AGTGACTATAGTATTAGCCATGCTC 57.836 40.000 5.09 0.00 40.44 4.26
2029 4975 6.127869 CGAGTGACTATAGTATTAGCCATGCT 60.128 42.308 5.09 0.00 43.41 3.79
2030 4976 6.030849 CGAGTGACTATAGTATTAGCCATGC 58.969 44.000 5.09 0.00 0.00 4.06
2031 4977 7.379098 TCGAGTGACTATAGTATTAGCCATG 57.621 40.000 5.09 0.00 0.00 3.66
2032 4978 7.612244 ACATCGAGTGACTATAGTATTAGCCAT 59.388 37.037 5.09 0.00 0.00 4.40
2033 4979 6.940867 ACATCGAGTGACTATAGTATTAGCCA 59.059 38.462 5.09 0.00 0.00 4.75
2034 4980 7.334921 AGACATCGAGTGACTATAGTATTAGCC 59.665 40.741 5.09 0.00 31.00 3.93
2035 4981 8.259049 AGACATCGAGTGACTATAGTATTAGC 57.741 38.462 5.09 0.00 31.00 3.09
2040 4986 9.819267 CCATATAGACATCGAGTGACTATAGTA 57.181 37.037 19.92 0.00 44.93 1.82
2041 4987 8.541234 TCCATATAGACATCGAGTGACTATAGT 58.459 37.037 19.92 4.68 44.93 2.12
2042 4988 8.950208 TCCATATAGACATCGAGTGACTATAG 57.050 38.462 19.92 0.00 44.93 1.31
2043 4989 8.541234 ACTCCATATAGACATCGAGTGACTATA 58.459 37.037 18.75 18.75 45.40 1.31
2044 4990 7.398829 ACTCCATATAGACATCGAGTGACTAT 58.601 38.462 16.84 16.84 44.32 2.12
2045 4991 6.770542 ACTCCATATAGACATCGAGTGACTA 58.229 40.000 0.00 0.76 38.95 2.59
2046 4992 5.626142 ACTCCATATAGACATCGAGTGACT 58.374 41.667 0.00 0.00 36.76 3.41
2047 4993 5.950758 ACTCCATATAGACATCGAGTGAC 57.049 43.478 0.00 0.00 0.00 3.67
2048 4994 5.278512 GCAACTCCATATAGACATCGAGTGA 60.279 44.000 0.00 0.00 31.24 3.41
2049 4995 4.920340 GCAACTCCATATAGACATCGAGTG 59.080 45.833 0.00 0.00 31.24 3.51
2050 4996 4.021894 GGCAACTCCATATAGACATCGAGT 60.022 45.833 0.00 0.00 34.01 4.18
2051 4997 4.021981 TGGCAACTCCATATAGACATCGAG 60.022 45.833 0.00 0.00 40.72 4.04
2052 4998 3.895041 TGGCAACTCCATATAGACATCGA 59.105 43.478 0.00 0.00 40.72 3.59
2053 4999 4.257267 TGGCAACTCCATATAGACATCG 57.743 45.455 0.00 0.00 40.72 3.84
2065 5011 2.486191 CCCTAGATGACATGGCAACTCC 60.486 54.545 15.57 0.00 37.61 3.85
2066 5012 2.843701 CCCTAGATGACATGGCAACTC 58.156 52.381 15.57 4.06 37.61 3.01
2067 5013 1.133976 GCCCTAGATGACATGGCAACT 60.134 52.381 16.39 16.39 41.76 3.16
2068 5014 1.133976 AGCCCTAGATGACATGGCAAC 60.134 52.381 4.70 1.74 44.60 4.17
2069 5015 1.134007 CAGCCCTAGATGACATGGCAA 60.134 52.381 4.70 0.00 44.60 4.52
2070 5016 0.471191 CAGCCCTAGATGACATGGCA 59.529 55.000 2.18 2.18 44.60 4.92
2071 5017 0.761187 TCAGCCCTAGATGACATGGC 59.239 55.000 6.43 6.43 42.48 4.40
2072 5018 2.027377 GGATCAGCCCTAGATGACATGG 60.027 54.545 0.00 0.00 42.18 3.66
2073 5019 2.353505 CGGATCAGCCCTAGATGACATG 60.354 54.545 0.00 0.00 42.18 3.21
2074 5020 1.898472 CGGATCAGCCCTAGATGACAT 59.102 52.381 0.00 0.00 42.18 3.06
2075 5021 1.133482 TCGGATCAGCCCTAGATGACA 60.133 52.381 0.00 0.00 42.18 3.58
2076 5022 1.621992 TCGGATCAGCCCTAGATGAC 58.378 55.000 0.00 0.00 42.18 3.06
2077 5023 2.381752 TTCGGATCAGCCCTAGATGA 57.618 50.000 0.00 0.00 43.83 2.92
2078 5024 3.332919 CAATTCGGATCAGCCCTAGATG 58.667 50.000 0.00 0.00 0.00 2.90
2079 5025 2.304180 CCAATTCGGATCAGCCCTAGAT 59.696 50.000 0.00 0.00 36.56 1.98
2080 5026 1.694150 CCAATTCGGATCAGCCCTAGA 59.306 52.381 0.00 0.00 36.56 2.43
2081 5027 1.694150 TCCAATTCGGATCAGCCCTAG 59.306 52.381 0.00 0.00 39.64 3.02
2082 5028 1.694150 CTCCAATTCGGATCAGCCCTA 59.306 52.381 0.00 0.00 45.19 3.53
2083 5029 0.471617 CTCCAATTCGGATCAGCCCT 59.528 55.000 0.00 0.00 45.19 5.19
2084 5030 0.181350 ACTCCAATTCGGATCAGCCC 59.819 55.000 0.00 0.00 45.19 5.19
2085 5031 2.910688 TACTCCAATTCGGATCAGCC 57.089 50.000 0.00 0.00 45.19 4.85
2086 5032 3.995199 TGATACTCCAATTCGGATCAGC 58.005 45.455 0.00 0.00 45.19 4.26
2087 5033 6.929625 ACTATGATACTCCAATTCGGATCAG 58.070 40.000 0.00 0.00 45.19 2.90
2088 5034 6.918067 ACTATGATACTCCAATTCGGATCA 57.082 37.500 0.00 0.00 45.19 2.92
2089 5035 7.122948 ACCTACTATGATACTCCAATTCGGATC 59.877 40.741 0.00 0.00 45.19 3.36
2090 5036 6.954684 ACCTACTATGATACTCCAATTCGGAT 59.045 38.462 0.00 0.00 45.19 4.18
2091 5037 6.312529 ACCTACTATGATACTCCAATTCGGA 58.687 40.000 0.00 0.00 43.61 4.55
2092 5038 6.591750 ACCTACTATGATACTCCAATTCGG 57.408 41.667 0.00 0.00 0.00 4.30
2093 5039 8.957466 TGATACCTACTATGATACTCCAATTCG 58.043 37.037 0.00 0.00 0.00 3.34
2096 5042 8.700051 GCATGATACCTACTATGATACTCCAAT 58.300 37.037 0.00 0.00 0.00 3.16
2097 5043 7.673926 TGCATGATACCTACTATGATACTCCAA 59.326 37.037 0.00 0.00 0.00 3.53
2098 5044 7.182060 TGCATGATACCTACTATGATACTCCA 58.818 38.462 0.00 0.00 0.00 3.86
2099 5045 7.646548 TGCATGATACCTACTATGATACTCC 57.353 40.000 0.00 0.00 0.00 3.85
2100 5046 9.743057 GAATGCATGATACCTACTATGATACTC 57.257 37.037 0.00 0.00 0.00 2.59
2101 5047 8.700051 GGAATGCATGATACCTACTATGATACT 58.300 37.037 0.00 0.00 0.00 2.12
2102 5048 8.478066 TGGAATGCATGATACCTACTATGATAC 58.522 37.037 0.00 0.00 0.00 2.24
2103 5049 8.608185 TGGAATGCATGATACCTACTATGATA 57.392 34.615 0.00 0.00 0.00 2.15
2104 5050 7.500629 TGGAATGCATGATACCTACTATGAT 57.499 36.000 0.00 0.00 0.00 2.45
2105 5051 6.933514 TGGAATGCATGATACCTACTATGA 57.066 37.500 0.00 0.00 0.00 2.15
2106 5052 8.571461 AATTGGAATGCATGATACCTACTATG 57.429 34.615 0.00 0.00 0.00 2.23
2107 5053 9.672673 GTAATTGGAATGCATGATACCTACTAT 57.327 33.333 0.00 0.00 0.00 2.12
2108 5054 7.817478 CGTAATTGGAATGCATGATACCTACTA 59.183 37.037 0.00 0.00 0.00 1.82
2109 5055 6.650807 CGTAATTGGAATGCATGATACCTACT 59.349 38.462 0.00 0.00 0.00 2.57
2110 5056 6.620733 GCGTAATTGGAATGCATGATACCTAC 60.621 42.308 0.00 0.00 0.00 3.18
2111 5057 5.411361 GCGTAATTGGAATGCATGATACCTA 59.589 40.000 0.00 0.00 0.00 3.08
2112 5058 4.216257 GCGTAATTGGAATGCATGATACCT 59.784 41.667 0.00 0.00 0.00 3.08
2113 5059 4.023279 TGCGTAATTGGAATGCATGATACC 60.023 41.667 0.00 2.71 34.03 2.73
2114 5060 5.107109 TGCGTAATTGGAATGCATGATAC 57.893 39.130 0.00 0.00 34.03 2.24
2115 5061 5.963176 ATGCGTAATTGGAATGCATGATA 57.037 34.783 0.00 0.00 45.49 2.15
2116 5062 4.859304 ATGCGTAATTGGAATGCATGAT 57.141 36.364 0.00 0.00 45.49 2.45
2117 5063 4.652421 AATGCGTAATTGGAATGCATGA 57.348 36.364 0.00 0.00 46.29 3.07
2118 5064 5.721876 AAAATGCGTAATTGGAATGCATG 57.278 34.783 0.00 0.00 46.29 4.06
2120 5066 7.038048 TCATAAAAATGCGTAATTGGAATGCA 58.962 30.769 0.00 0.00 42.68 3.96
2121 5067 7.434897 TCTCATAAAAATGCGTAATTGGAATGC 59.565 33.333 0.00 0.00 0.00 3.56
2122 5068 8.854979 TCTCATAAAAATGCGTAATTGGAATG 57.145 30.769 0.00 0.00 0.00 2.67
2123 5069 9.467258 CATCTCATAAAAATGCGTAATTGGAAT 57.533 29.630 0.00 0.00 0.00 3.01
2124 5070 7.920151 CCATCTCATAAAAATGCGTAATTGGAA 59.080 33.333 0.00 0.00 0.00 3.53
2125 5071 7.068103 ACCATCTCATAAAAATGCGTAATTGGA 59.932 33.333 0.00 0.00 0.00 3.53
2126 5072 7.202526 ACCATCTCATAAAAATGCGTAATTGG 58.797 34.615 0.00 0.00 0.00 3.16
2127 5073 9.169468 GTACCATCTCATAAAAATGCGTAATTG 57.831 33.333 0.00 0.00 0.00 2.32
2128 5074 8.898761 TGTACCATCTCATAAAAATGCGTAATT 58.101 29.630 0.00 0.00 0.00 1.40
2129 5075 8.342634 GTGTACCATCTCATAAAAATGCGTAAT 58.657 33.333 0.00 0.00 0.00 1.89
2130 5076 7.334671 TGTGTACCATCTCATAAAAATGCGTAA 59.665 33.333 0.00 0.00 0.00 3.18
2131 5077 6.819146 TGTGTACCATCTCATAAAAATGCGTA 59.181 34.615 0.00 0.00 0.00 4.42
2132 5078 5.645929 TGTGTACCATCTCATAAAAATGCGT 59.354 36.000 0.00 0.00 0.00 5.24
2133 5079 6.117911 TGTGTACCATCTCATAAAAATGCG 57.882 37.500 0.00 0.00 0.00 4.73
2134 5080 8.931385 AATTGTGTACCATCTCATAAAAATGC 57.069 30.769 0.00 0.00 0.00 3.56
2143 5089 9.613428 CTTCCTATTTAATTGTGTACCATCTCA 57.387 33.333 0.00 0.00 0.00 3.27
2144 5090 9.057089 CCTTCCTATTTAATTGTGTACCATCTC 57.943 37.037 0.00 0.00 0.00 2.75
2145 5091 8.778059 TCCTTCCTATTTAATTGTGTACCATCT 58.222 33.333 0.00 0.00 0.00 2.90
2146 5092 8.974060 TCCTTCCTATTTAATTGTGTACCATC 57.026 34.615 0.00 0.00 0.00 3.51
2147 5093 9.762381 TTTCCTTCCTATTTAATTGTGTACCAT 57.238 29.630 0.00 0.00 0.00 3.55
2148 5094 9.238368 CTTTCCTTCCTATTTAATTGTGTACCA 57.762 33.333 0.00 0.00 0.00 3.25
2149 5095 8.683615 CCTTTCCTTCCTATTTAATTGTGTACC 58.316 37.037 0.00 0.00 0.00 3.34
2150 5096 9.457436 TCCTTTCCTTCCTATTTAATTGTGTAC 57.543 33.333 0.00 0.00 0.00 2.90
2152 5098 9.547279 AATCCTTTCCTTCCTATTTAATTGTGT 57.453 29.630 0.00 0.00 0.00 3.72
2153 5099 9.807649 CAATCCTTTCCTTCCTATTTAATTGTG 57.192 33.333 0.00 0.00 0.00 3.33
2154 5100 9.768215 TCAATCCTTTCCTTCCTATTTAATTGT 57.232 29.630 0.00 0.00 0.00 2.71
2156 5102 9.997172 ACTCAATCCTTTCCTTCCTATTTAATT 57.003 29.630 0.00 0.00 0.00 1.40
2160 5106 8.781951 TGATACTCAATCCTTTCCTTCCTATTT 58.218 33.333 0.00 0.00 33.22 1.40
2161 5107 8.337118 TGATACTCAATCCTTTCCTTCCTATT 57.663 34.615 0.00 0.00 33.22 1.73
2162 5108 7.937700 TGATACTCAATCCTTTCCTTCCTAT 57.062 36.000 0.00 0.00 33.22 2.57
2163 5109 7.568738 TCATGATACTCAATCCTTTCCTTCCTA 59.431 37.037 0.00 0.00 33.22 2.94
2164 5110 6.388100 TCATGATACTCAATCCTTTCCTTCCT 59.612 38.462 0.00 0.00 33.22 3.36
2165 5111 6.595682 TCATGATACTCAATCCTTTCCTTCC 58.404 40.000 0.00 0.00 33.22 3.46
2166 5112 9.956640 ATATCATGATACTCAATCCTTTCCTTC 57.043 33.333 17.60 0.00 33.22 3.46
2174 5120 9.988815 GGTACCATATATCATGATACTCAATCC 57.011 37.037 17.60 10.96 33.22 3.01
2175 5121 9.684448 CGGTACCATATATCATGATACTCAATC 57.316 37.037 17.60 6.34 34.93 2.67
2176 5122 9.201989 ACGGTACCATATATCATGATACTCAAT 57.798 33.333 17.60 5.41 0.00 2.57
2177 5123 8.589701 ACGGTACCATATATCATGATACTCAA 57.410 34.615 17.60 4.70 0.00 3.02
2178 5124 9.862149 ATACGGTACCATATATCATGATACTCA 57.138 33.333 17.60 6.75 0.00 3.41
2180 5126 9.862149 TGATACGGTACCATATATCATGATACT 57.138 33.333 17.60 9.60 30.83 2.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.