Multiple sequence alignment - TraesCS1D01G027400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G027400 chr1D 100.000 2237 0 0 1 2237 10985794 10988030 0.000000e+00 4132.0
1 TraesCS1D01G027400 chr1D 95.330 621 24 2 1219 1839 11032761 11033376 0.000000e+00 981.0
2 TraesCS1D01G027400 chr1D 95.032 624 23 3 1219 1839 11081967 11082585 0.000000e+00 974.0
3 TraesCS1D01G027400 chr1D 95.032 624 22 4 1219 1839 11001891 11002508 0.000000e+00 972.0
4 TraesCS1D01G027400 chr1D 94.444 630 21 4 1219 1839 11115974 11116598 0.000000e+00 957.0
5 TraesCS1D01G027400 chr1D 96.287 404 8 2 1835 2237 11007764 11008161 0.000000e+00 656.0
6 TraesCS1D01G027400 chr1D 96.287 404 8 2 1835 2237 11038625 11039022 0.000000e+00 656.0
7 TraesCS1D01G027400 chr1D 96.287 404 8 2 1835 2237 11121857 11122254 0.000000e+00 656.0
8 TraesCS1D01G027400 chr1D 96.040 404 9 2 1835 2237 11087827 11088224 0.000000e+00 651.0
9 TraesCS1D01G027400 chr1D 94.068 354 16 2 114 462 427590912 427591265 1.180000e-147 532.0
10 TraesCS1D01G027400 chr1A 93.278 1696 89 15 509 2194 22657454 22655774 0.000000e+00 2477.0
11 TraesCS1D01G027400 chr1A 94.872 351 15 1 111 458 147500054 147500404 1.510000e-151 545.0
12 TraesCS1D01G027400 chr1A 97.959 49 1 0 2189 2237 22646237 22646189 3.960000e-13 86.1
13 TraesCS1D01G027400 chr1B 87.753 939 68 16 459 1376 16464959 16465871 0.000000e+00 1053.0
14 TraesCS1D01G027400 chr1B 86.538 676 70 15 1402 2069 16465862 16466524 0.000000e+00 725.0
15 TraesCS1D01G027400 chr2D 95.115 348 13 2 118 461 472431115 472431462 1.510000e-151 545.0
16 TraesCS1D01G027400 chr5A 95.349 344 13 1 118 458 642855553 642855896 5.430000e-151 544.0
17 TraesCS1D01G027400 chr6D 94.587 351 16 1 111 458 352086393 352086743 7.030000e-150 540.0
18 TraesCS1D01G027400 chr6A 95.058 344 14 1 118 458 514267972 514268315 2.530000e-149 538.0
19 TraesCS1D01G027400 chr4D 95.058 344 14 1 118 458 40896195 40896538 2.530000e-149 538.0
20 TraesCS1D01G027400 chr7A 94.540 348 16 1 114 458 198086626 198086279 3.270000e-148 534.0
21 TraesCS1D01G027400 chr3D 94.302 351 17 1 111 458 319298502 319298852 3.270000e-148 534.0
22 TraesCS1D01G027400 chr3D 90.323 62 4 1 17 78 528734498 528734439 1.840000e-11 80.5
23 TraesCS1D01G027400 chr3D 90.196 51 3 2 17 67 613828347 613828395 5.160000e-07 65.8
24 TraesCS1D01G027400 chr3B 85.393 89 13 0 4 92 511074365 511074277 2.370000e-15 93.5
25 TraesCS1D01G027400 chr6B 85.556 90 7 4 17 101 424016993 424016905 3.060000e-14 89.8
26 TraesCS1D01G027400 chr6B 85.556 90 7 4 17 101 424242783 424242695 3.060000e-14 89.8
27 TraesCS1D01G027400 chr7D 93.103 58 4 0 17 74 94705229 94705172 3.960000e-13 86.1
28 TraesCS1D01G027400 chr7D 93.103 58 4 0 17 74 202495027 202494970 3.960000e-13 86.1
29 TraesCS1D01G027400 chr2B 92.857 56 4 0 17 72 136391805 136391750 5.120000e-12 82.4
30 TraesCS1D01G027400 chr3A 86.667 60 7 1 1 59 323275061 323275002 5.160000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G027400 chr1D 10985794 10988030 2236 False 4132 4132 100.0000 1 2237 1 chr1D.!!$F1 2236
1 TraesCS1D01G027400 chr1D 11032761 11033376 615 False 981 981 95.3300 1219 1839 1 chr1D.!!$F4 620
2 TraesCS1D01G027400 chr1D 11081967 11082585 618 False 974 974 95.0320 1219 1839 1 chr1D.!!$F6 620
3 TraesCS1D01G027400 chr1D 11001891 11002508 617 False 972 972 95.0320 1219 1839 1 chr1D.!!$F2 620
4 TraesCS1D01G027400 chr1D 11115974 11116598 624 False 957 957 94.4440 1219 1839 1 chr1D.!!$F8 620
5 TraesCS1D01G027400 chr1A 22655774 22657454 1680 True 2477 2477 93.2780 509 2194 1 chr1A.!!$R2 1685
6 TraesCS1D01G027400 chr1B 16464959 16466524 1565 False 889 1053 87.1455 459 2069 2 chr1B.!!$F1 1610

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
456 457 0.039618 TCCTTTGGATCCAAGCACCC 59.96 55.0 25.69 0.0 37.24 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2137 2181 0.030638 CTTCAACTTGCCACCAACGG 59.969 55.0 0.0 0.0 0.0 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.791887 AGATTCCAATGCGTTCTACATATG 57.208 37.500 0.00 0.00 0.00 1.78
25 26 6.524734 AGATTCCAATGCGTTCTACATATGA 58.475 36.000 10.38 0.00 0.00 2.15
26 27 6.992123 AGATTCCAATGCGTTCTACATATGAA 59.008 34.615 10.38 0.00 0.00 2.57
27 28 6.603237 TTCCAATGCGTTCTACATATGAAG 57.397 37.500 10.38 0.00 0.00 3.02
28 29 4.511454 TCCAATGCGTTCTACATATGAAGC 59.489 41.667 10.38 1.34 0.00 3.86
29 30 4.273235 CCAATGCGTTCTACATATGAAGCA 59.727 41.667 10.38 7.44 34.65 3.91
30 31 5.220835 CCAATGCGTTCTACATATGAAGCAA 60.221 40.000 10.38 0.00 34.24 3.91
31 32 6.257423 CAATGCGTTCTACATATGAAGCAAA 58.743 36.000 10.38 0.00 34.24 3.68
32 33 5.469373 TGCGTTCTACATATGAAGCAAAG 57.531 39.130 10.38 0.65 30.71 2.77
33 34 4.935205 TGCGTTCTACATATGAAGCAAAGT 59.065 37.500 10.38 0.00 30.71 2.66
34 35 5.163864 TGCGTTCTACATATGAAGCAAAGTG 60.164 40.000 10.38 0.00 30.71 3.16
35 36 5.063438 GCGTTCTACATATGAAGCAAAGTGA 59.937 40.000 10.38 0.00 0.00 3.41
36 37 6.700020 CGTTCTACATATGAAGCAAAGTGAG 58.300 40.000 10.38 0.00 0.00 3.51
37 38 6.311445 CGTTCTACATATGAAGCAAAGTGAGT 59.689 38.462 10.38 0.00 0.00 3.41
38 39 7.459486 GTTCTACATATGAAGCAAAGTGAGTG 58.541 38.462 10.38 0.00 0.00 3.51
39 40 6.935167 TCTACATATGAAGCAAAGTGAGTGA 58.065 36.000 10.38 0.00 0.00 3.41
40 41 7.386059 TCTACATATGAAGCAAAGTGAGTGAA 58.614 34.615 10.38 0.00 0.00 3.18
41 42 8.043113 TCTACATATGAAGCAAAGTGAGTGAAT 58.957 33.333 10.38 0.00 0.00 2.57
42 43 7.081526 ACATATGAAGCAAAGTGAGTGAATC 57.918 36.000 10.38 0.00 0.00 2.52
43 44 6.883217 ACATATGAAGCAAAGTGAGTGAATCT 59.117 34.615 10.38 0.00 0.00 2.40
44 45 8.043113 ACATATGAAGCAAAGTGAGTGAATCTA 58.957 33.333 10.38 0.00 0.00 1.98
45 46 6.734104 ATGAAGCAAAGTGAGTGAATCTAC 57.266 37.500 0.00 0.00 0.00 2.59
46 47 5.610398 TGAAGCAAAGTGAGTGAATCTACA 58.390 37.500 0.00 0.00 0.00 2.74
47 48 5.466728 TGAAGCAAAGTGAGTGAATCTACAC 59.533 40.000 0.00 0.00 40.60 2.90
61 62 8.311650 GTGAATCTACACTGTTAAATGTGTCT 57.688 34.615 15.23 3.38 44.94 3.41
62 63 9.419297 GTGAATCTACACTGTTAAATGTGTCTA 57.581 33.333 15.23 7.89 44.94 2.59
72 73 9.692749 ACTGTTAAATGTGTCTATATACATCCG 57.307 33.333 0.00 0.00 36.52 4.18
73 74 9.692749 CTGTTAAATGTGTCTATATACATCCGT 57.307 33.333 0.00 0.00 36.52 4.69
74 75 9.471084 TGTTAAATGTGTCTATATACATCCGTG 57.529 33.333 0.00 0.00 36.52 4.94
75 76 9.472361 GTTAAATGTGTCTATATACATCCGTGT 57.528 33.333 0.00 0.00 36.52 4.49
84 85 3.844577 ATACATCCGTGTATAGTCCGC 57.155 47.619 0.00 0.00 46.91 5.54
85 86 1.395635 ACATCCGTGTATAGTCCGCA 58.604 50.000 0.00 0.00 36.63 5.69
86 87 1.961394 ACATCCGTGTATAGTCCGCAT 59.039 47.619 0.00 0.00 36.63 4.73
87 88 2.364324 ACATCCGTGTATAGTCCGCATT 59.636 45.455 0.00 0.00 36.63 3.56
88 89 2.502213 TCCGTGTATAGTCCGCATTG 57.498 50.000 0.00 0.00 0.00 2.82
89 90 2.025898 TCCGTGTATAGTCCGCATTGA 58.974 47.619 0.00 0.00 0.00 2.57
90 91 2.427812 TCCGTGTATAGTCCGCATTGAA 59.572 45.455 0.00 0.00 0.00 2.69
91 92 3.119065 TCCGTGTATAGTCCGCATTGAAA 60.119 43.478 0.00 0.00 0.00 2.69
92 93 3.807622 CCGTGTATAGTCCGCATTGAAAT 59.192 43.478 0.00 0.00 0.00 2.17
93 94 4.084537 CCGTGTATAGTCCGCATTGAAATC 60.085 45.833 0.00 0.00 0.00 2.17
94 95 4.745125 CGTGTATAGTCCGCATTGAAATCT 59.255 41.667 0.00 0.00 0.00 2.40
95 96 5.107837 CGTGTATAGTCCGCATTGAAATCTC 60.108 44.000 0.00 0.00 0.00 2.75
96 97 5.986135 GTGTATAGTCCGCATTGAAATCTCT 59.014 40.000 0.00 0.00 0.00 3.10
97 98 7.145985 GTGTATAGTCCGCATTGAAATCTCTA 58.854 38.462 0.00 0.00 0.00 2.43
98 99 7.652105 GTGTATAGTCCGCATTGAAATCTCTAA 59.348 37.037 0.00 0.00 0.00 2.10
99 100 8.201464 TGTATAGTCCGCATTGAAATCTCTAAA 58.799 33.333 0.00 0.00 0.00 1.85
100 101 9.042008 GTATAGTCCGCATTGAAATCTCTAAAA 57.958 33.333 0.00 0.00 0.00 1.52
101 102 6.183309 AGTCCGCATTGAAATCTCTAAAAC 57.817 37.500 0.00 0.00 0.00 2.43
102 103 5.022021 GTCCGCATTGAAATCTCTAAAACG 58.978 41.667 0.00 0.00 0.00 3.60
103 104 4.094294 TCCGCATTGAAATCTCTAAAACGG 59.906 41.667 0.00 0.00 37.15 4.44
104 105 4.094294 CCGCATTGAAATCTCTAAAACGGA 59.906 41.667 0.00 0.00 38.00 4.69
105 106 5.391523 CCGCATTGAAATCTCTAAAACGGAA 60.392 40.000 0.00 0.00 38.00 4.30
106 107 5.734498 CGCATTGAAATCTCTAAAACGGAAG 59.266 40.000 0.00 0.00 0.00 3.46
107 108 6.030228 GCATTGAAATCTCTAAAACGGAAGG 58.970 40.000 0.00 0.00 0.00 3.46
108 109 6.128007 GCATTGAAATCTCTAAAACGGAAGGA 60.128 38.462 0.00 0.00 0.00 3.36
109 110 7.467623 CATTGAAATCTCTAAAACGGAAGGAG 58.532 38.462 0.00 0.00 0.00 3.69
110 111 6.110411 TGAAATCTCTAAAACGGAAGGAGT 57.890 37.500 0.00 0.00 0.00 3.85
111 112 7.235935 TGAAATCTCTAAAACGGAAGGAGTA 57.764 36.000 0.00 0.00 0.00 2.59
112 113 7.321153 TGAAATCTCTAAAACGGAAGGAGTAG 58.679 38.462 0.00 0.00 0.00 2.57
113 114 6.854091 AATCTCTAAAACGGAAGGAGTAGT 57.146 37.500 0.00 0.00 0.00 2.73
114 115 6.854091 ATCTCTAAAACGGAAGGAGTAGTT 57.146 37.500 0.00 0.00 0.00 2.24
115 116 7.951347 ATCTCTAAAACGGAAGGAGTAGTTA 57.049 36.000 0.00 0.00 0.00 2.24
116 117 7.765695 TCTCTAAAACGGAAGGAGTAGTTAA 57.234 36.000 0.00 0.00 0.00 2.01
117 118 8.181904 TCTCTAAAACGGAAGGAGTAGTTAAA 57.818 34.615 0.00 0.00 0.00 1.52
118 119 8.302438 TCTCTAAAACGGAAGGAGTAGTTAAAG 58.698 37.037 0.00 0.00 0.00 1.85
119 120 7.381323 TCTAAAACGGAAGGAGTAGTTAAAGG 58.619 38.462 0.00 0.00 0.00 3.11
120 121 4.548451 AACGGAAGGAGTAGTTAAAGGG 57.452 45.455 0.00 0.00 0.00 3.95
121 122 3.514539 ACGGAAGGAGTAGTTAAAGGGT 58.485 45.455 0.00 0.00 0.00 4.34
122 123 3.260128 ACGGAAGGAGTAGTTAAAGGGTG 59.740 47.826 0.00 0.00 0.00 4.61
123 124 3.607741 GGAAGGAGTAGTTAAAGGGTGC 58.392 50.000 0.00 0.00 0.00 5.01
124 125 3.263681 GGAAGGAGTAGTTAAAGGGTGCT 59.736 47.826 0.00 0.00 0.00 4.40
125 126 4.263374 GGAAGGAGTAGTTAAAGGGTGCTT 60.263 45.833 0.00 0.00 0.00 3.91
126 127 4.287766 AGGAGTAGTTAAAGGGTGCTTG 57.712 45.455 0.00 0.00 0.00 4.01
127 128 3.009143 AGGAGTAGTTAAAGGGTGCTTGG 59.991 47.826 0.00 0.00 0.00 3.61
128 129 3.008704 GGAGTAGTTAAAGGGTGCTTGGA 59.991 47.826 0.00 0.00 0.00 3.53
129 130 4.324331 GGAGTAGTTAAAGGGTGCTTGGAT 60.324 45.833 0.00 0.00 0.00 3.41
130 131 5.104652 GGAGTAGTTAAAGGGTGCTTGGATA 60.105 44.000 0.00 0.00 0.00 2.59
131 132 5.742063 AGTAGTTAAAGGGTGCTTGGATAC 58.258 41.667 0.00 0.00 0.00 2.24
132 133 3.606687 AGTTAAAGGGTGCTTGGATACG 58.393 45.455 0.00 0.00 42.51 3.06
133 134 3.008704 AGTTAAAGGGTGCTTGGATACGT 59.991 43.478 0.00 0.00 42.51 3.57
134 135 2.579410 AAAGGGTGCTTGGATACGTT 57.421 45.000 0.00 0.00 42.51 3.99
135 136 2.579410 AAGGGTGCTTGGATACGTTT 57.421 45.000 0.00 0.00 42.51 3.60
136 137 2.579410 AGGGTGCTTGGATACGTTTT 57.421 45.000 0.00 0.00 42.51 2.43
137 138 3.706600 AGGGTGCTTGGATACGTTTTA 57.293 42.857 0.00 0.00 42.51 1.52
138 139 3.606687 AGGGTGCTTGGATACGTTTTAG 58.393 45.455 0.00 0.00 42.51 1.85
139 140 3.008704 AGGGTGCTTGGATACGTTTTAGT 59.991 43.478 0.00 0.00 42.51 2.24
140 141 3.373130 GGGTGCTTGGATACGTTTTAGTC 59.627 47.826 0.00 0.00 42.51 2.59
141 142 4.251268 GGTGCTTGGATACGTTTTAGTCT 58.749 43.478 0.00 0.00 42.51 3.24
142 143 4.329256 GGTGCTTGGATACGTTTTAGTCTC 59.671 45.833 0.00 0.00 42.51 3.36
143 144 4.927425 GTGCTTGGATACGTTTTAGTCTCA 59.073 41.667 0.00 0.00 42.51 3.27
144 145 5.581085 GTGCTTGGATACGTTTTAGTCTCAT 59.419 40.000 0.00 0.00 42.51 2.90
145 146 5.580691 TGCTTGGATACGTTTTAGTCTCATG 59.419 40.000 0.00 0.00 42.51 3.07
146 147 5.810587 GCTTGGATACGTTTTAGTCTCATGA 59.189 40.000 0.00 0.00 42.51 3.07
147 148 6.237861 GCTTGGATACGTTTTAGTCTCATGAC 60.238 42.308 0.00 0.00 41.21 3.06
149 150 7.634671 TGGATACGTTTTAGTCTCATGACTA 57.365 36.000 0.00 2.20 46.46 2.59
161 162 6.282199 GTCTCATGACTAAAAGTAGTGGGA 57.718 41.667 0.00 0.00 40.82 4.37
162 163 6.100668 GTCTCATGACTAAAAGTAGTGGGAC 58.899 44.000 0.00 7.84 40.82 4.46
163 164 6.017192 TCTCATGACTAAAAGTAGTGGGACT 58.983 40.000 0.00 0.00 40.82 3.85
164 165 7.122353 GTCTCATGACTAAAAGTAGTGGGACTA 59.878 40.741 13.07 0.00 40.82 2.59
165 166 7.672660 TCTCATGACTAAAAGTAGTGGGACTAA 59.327 37.037 0.00 0.00 40.82 2.24
166 167 8.197592 TCATGACTAAAAGTAGTGGGACTAAA 57.802 34.615 0.00 0.00 40.82 1.85
167 168 8.653191 TCATGACTAAAAGTAGTGGGACTAAAA 58.347 33.333 0.00 0.00 40.82 1.52
168 169 8.718734 CATGACTAAAAGTAGTGGGACTAAAAC 58.281 37.037 0.00 0.00 40.82 2.43
169 170 8.026396 TGACTAAAAGTAGTGGGACTAAAACT 57.974 34.615 0.00 0.00 40.82 2.66
170 171 8.488668 TGACTAAAAGTAGTGGGACTAAAACTT 58.511 33.333 0.00 0.00 40.82 2.66
171 172 8.672823 ACTAAAAGTAGTGGGACTAAAACTTG 57.327 34.615 0.00 0.00 39.20 3.16
172 173 6.387041 AAAAGTAGTGGGACTAAAACTTGC 57.613 37.500 0.00 0.00 31.62 4.01
173 174 4.976540 AGTAGTGGGACTAAAACTTGCT 57.023 40.909 0.00 0.00 31.62 3.91
174 175 6.429521 AAGTAGTGGGACTAAAACTTGCTA 57.570 37.500 0.00 0.00 31.62 3.49
175 176 6.038997 AGTAGTGGGACTAAAACTTGCTAG 57.961 41.667 0.00 0.00 31.62 3.42
176 177 3.676093 AGTGGGACTAAAACTTGCTAGC 58.324 45.455 8.10 8.10 0.00 3.42
177 178 2.747989 GTGGGACTAAAACTTGCTAGCC 59.252 50.000 13.29 0.00 0.00 3.93
178 179 2.642807 TGGGACTAAAACTTGCTAGCCT 59.357 45.455 13.29 0.00 0.00 4.58
179 180 3.271729 GGGACTAAAACTTGCTAGCCTC 58.728 50.000 13.29 0.00 0.00 4.70
180 181 3.307480 GGGACTAAAACTTGCTAGCCTCA 60.307 47.826 13.29 0.00 0.00 3.86
181 182 3.685272 GGACTAAAACTTGCTAGCCTCAC 59.315 47.826 13.29 0.00 0.00 3.51
182 183 4.563786 GGACTAAAACTTGCTAGCCTCACT 60.564 45.833 13.29 0.00 0.00 3.41
183 184 4.570930 ACTAAAACTTGCTAGCCTCACTC 58.429 43.478 13.29 0.00 0.00 3.51
184 185 3.492102 AAAACTTGCTAGCCTCACTCA 57.508 42.857 13.29 0.00 0.00 3.41
185 186 3.710209 AAACTTGCTAGCCTCACTCAT 57.290 42.857 13.29 0.00 0.00 2.90
186 187 2.687700 ACTTGCTAGCCTCACTCATG 57.312 50.000 13.29 0.00 0.00 3.07
187 188 1.297664 CTTGCTAGCCTCACTCATGC 58.702 55.000 13.29 0.00 0.00 4.06
188 189 0.907486 TTGCTAGCCTCACTCATGCT 59.093 50.000 13.29 0.00 39.10 3.79
189 190 0.907486 TGCTAGCCTCACTCATGCTT 59.093 50.000 13.29 0.00 36.57 3.91
190 191 1.297664 GCTAGCCTCACTCATGCTTG 58.702 55.000 2.29 0.00 36.57 4.01
191 192 1.950828 CTAGCCTCACTCATGCTTGG 58.049 55.000 0.00 0.00 36.57 3.61
192 193 1.483827 CTAGCCTCACTCATGCTTGGA 59.516 52.381 0.00 0.00 36.57 3.53
193 194 0.917533 AGCCTCACTCATGCTTGGAT 59.082 50.000 0.00 0.00 29.17 3.41
194 195 1.134159 AGCCTCACTCATGCTTGGATC 60.134 52.381 0.00 0.00 29.17 3.36
195 196 1.964552 CCTCACTCATGCTTGGATCC 58.035 55.000 4.20 4.20 0.00 3.36
196 197 1.211212 CCTCACTCATGCTTGGATCCA 59.789 52.381 11.44 11.44 0.00 3.41
197 198 2.356432 CCTCACTCATGCTTGGATCCAA 60.356 50.000 25.53 25.53 0.00 3.53
198 199 3.349927 CTCACTCATGCTTGGATCCAAA 58.650 45.455 26.87 14.63 35.33 3.28
199 200 3.952323 CTCACTCATGCTTGGATCCAAAT 59.048 43.478 26.87 16.27 35.33 2.32
200 201 5.114764 TCACTCATGCTTGGATCCAAATA 57.885 39.130 26.87 18.63 35.33 1.40
201 202 4.883585 TCACTCATGCTTGGATCCAAATAC 59.116 41.667 26.87 19.00 35.33 1.89
202 203 4.885907 CACTCATGCTTGGATCCAAATACT 59.114 41.667 26.87 10.16 35.33 2.12
203 204 6.057533 CACTCATGCTTGGATCCAAATACTA 58.942 40.000 26.87 12.35 35.33 1.82
204 205 6.543465 CACTCATGCTTGGATCCAAATACTAA 59.457 38.462 26.87 10.91 35.33 2.24
205 206 7.067372 CACTCATGCTTGGATCCAAATACTAAA 59.933 37.037 26.87 9.45 35.33 1.85
206 207 7.284034 ACTCATGCTTGGATCCAAATACTAAAG 59.716 37.037 26.87 18.77 35.33 1.85
207 208 7.345691 TCATGCTTGGATCCAAATACTAAAGA 58.654 34.615 26.87 13.83 35.33 2.52
208 209 7.500227 TCATGCTTGGATCCAAATACTAAAGAG 59.500 37.037 26.87 12.80 35.33 2.85
209 210 6.957631 TGCTTGGATCCAAATACTAAAGAGA 58.042 36.000 26.87 1.15 35.33 3.10
210 211 6.823689 TGCTTGGATCCAAATACTAAAGAGAC 59.176 38.462 26.87 8.83 35.33 3.36
211 212 7.051000 GCTTGGATCCAAATACTAAAGAGACT 58.949 38.462 26.87 0.00 35.33 3.24
212 213 8.204836 GCTTGGATCCAAATACTAAAGAGACTA 58.795 37.037 26.87 0.00 35.33 2.59
229 230 8.499403 AAGAGACTAAAATCAAGGTAATGAGC 57.501 34.615 0.00 0.00 31.76 4.26
230 231 7.624549 AGAGACTAAAATCAAGGTAATGAGCA 58.375 34.615 0.00 0.00 31.76 4.26
231 232 8.270744 AGAGACTAAAATCAAGGTAATGAGCAT 58.729 33.333 0.00 0.00 31.76 3.79
232 233 8.814038 AGACTAAAATCAAGGTAATGAGCATT 57.186 30.769 0.97 0.97 31.76 3.56
233 234 9.247861 AGACTAAAATCAAGGTAATGAGCATTT 57.752 29.630 0.52 0.00 31.76 2.32
242 243 9.866655 TCAAGGTAATGAGCATTTATTATCCTT 57.133 29.630 0.52 0.00 34.42 3.36
244 245 9.866655 AAGGTAATGAGCATTTATTATCCTTCA 57.133 29.630 0.52 0.00 31.85 3.02
245 246 9.866655 AGGTAATGAGCATTTATTATCCTTCAA 57.133 29.630 0.52 0.00 32.50 2.69
249 250 7.346751 TGAGCATTTATTATCCTTCAAACCC 57.653 36.000 0.00 0.00 0.00 4.11
250 251 7.125391 TGAGCATTTATTATCCTTCAAACCCT 58.875 34.615 0.00 0.00 0.00 4.34
251 252 7.285401 TGAGCATTTATTATCCTTCAAACCCTC 59.715 37.037 0.00 0.00 0.00 4.30
252 253 6.551227 AGCATTTATTATCCTTCAAACCCTCC 59.449 38.462 0.00 0.00 0.00 4.30
253 254 6.323739 GCATTTATTATCCTTCAAACCCTCCA 59.676 38.462 0.00 0.00 0.00 3.86
254 255 7.147742 GCATTTATTATCCTTCAAACCCTCCAA 60.148 37.037 0.00 0.00 0.00 3.53
255 256 8.927411 CATTTATTATCCTTCAAACCCTCCAAT 58.073 33.333 0.00 0.00 0.00 3.16
257 258 8.990163 TTATTATCCTTCAAACCCTCCAATAC 57.010 34.615 0.00 0.00 0.00 1.89
258 259 4.946160 ATCCTTCAAACCCTCCAATACA 57.054 40.909 0.00 0.00 0.00 2.29
259 260 4.301072 TCCTTCAAACCCTCCAATACAG 57.699 45.455 0.00 0.00 0.00 2.74
260 261 3.913799 TCCTTCAAACCCTCCAATACAGA 59.086 43.478 0.00 0.00 0.00 3.41
261 262 4.352595 TCCTTCAAACCCTCCAATACAGAA 59.647 41.667 0.00 0.00 0.00 3.02
262 263 4.459337 CCTTCAAACCCTCCAATACAGAAC 59.541 45.833 0.00 0.00 0.00 3.01
263 264 4.993705 TCAAACCCTCCAATACAGAACT 57.006 40.909 0.00 0.00 0.00 3.01
264 265 4.906618 TCAAACCCTCCAATACAGAACTC 58.093 43.478 0.00 0.00 0.00 3.01
265 266 3.611766 AACCCTCCAATACAGAACTCG 57.388 47.619 0.00 0.00 0.00 4.18
266 267 2.537143 ACCCTCCAATACAGAACTCGT 58.463 47.619 0.00 0.00 0.00 4.18
267 268 2.496470 ACCCTCCAATACAGAACTCGTC 59.504 50.000 0.00 0.00 0.00 4.20
268 269 2.761208 CCCTCCAATACAGAACTCGTCT 59.239 50.000 0.00 0.00 36.88 4.18
277 278 2.802787 AGAACTCGTCTGTGTTGGAG 57.197 50.000 0.00 0.00 34.29 3.86
278 279 2.307768 AGAACTCGTCTGTGTTGGAGA 58.692 47.619 0.00 0.00 34.29 3.71
279 280 2.294791 AGAACTCGTCTGTGTTGGAGAG 59.705 50.000 0.00 0.00 34.29 3.20
280 281 0.962489 ACTCGTCTGTGTTGGAGAGG 59.038 55.000 0.00 0.00 0.00 3.69
281 282 1.248486 CTCGTCTGTGTTGGAGAGGA 58.752 55.000 0.00 0.00 34.17 3.71
282 283 1.201181 CTCGTCTGTGTTGGAGAGGAG 59.799 57.143 0.00 0.00 42.75 3.69
283 284 0.962489 CGTCTGTGTTGGAGAGGAGT 59.038 55.000 0.00 0.00 0.00 3.85
284 285 1.341531 CGTCTGTGTTGGAGAGGAGTT 59.658 52.381 0.00 0.00 0.00 3.01
285 286 2.557056 CGTCTGTGTTGGAGAGGAGTTA 59.443 50.000 0.00 0.00 0.00 2.24
286 287 3.005472 CGTCTGTGTTGGAGAGGAGTTAA 59.995 47.826 0.00 0.00 0.00 2.01
287 288 4.500887 CGTCTGTGTTGGAGAGGAGTTAAA 60.501 45.833 0.00 0.00 0.00 1.52
288 289 5.552178 GTCTGTGTTGGAGAGGAGTTAAAT 58.448 41.667 0.00 0.00 0.00 1.40
289 290 5.409826 GTCTGTGTTGGAGAGGAGTTAAATG 59.590 44.000 0.00 0.00 0.00 2.32
290 291 5.306937 TCTGTGTTGGAGAGGAGTTAAATGA 59.693 40.000 0.00 0.00 0.00 2.57
291 292 5.551233 TGTGTTGGAGAGGAGTTAAATGAG 58.449 41.667 0.00 0.00 0.00 2.90
292 293 4.938226 GTGTTGGAGAGGAGTTAAATGAGG 59.062 45.833 0.00 0.00 0.00 3.86
293 294 4.844085 TGTTGGAGAGGAGTTAAATGAGGA 59.156 41.667 0.00 0.00 0.00 3.71
294 295 5.046304 TGTTGGAGAGGAGTTAAATGAGGAG 60.046 44.000 0.00 0.00 0.00 3.69
295 296 4.947883 TGGAGAGGAGTTAAATGAGGAGA 58.052 43.478 0.00 0.00 0.00 3.71
296 297 4.959210 TGGAGAGGAGTTAAATGAGGAGAG 59.041 45.833 0.00 0.00 0.00 3.20
297 298 5.205056 GGAGAGGAGTTAAATGAGGAGAGA 58.795 45.833 0.00 0.00 0.00 3.10
298 299 5.659079 GGAGAGGAGTTAAATGAGGAGAGAA 59.341 44.000 0.00 0.00 0.00 2.87
299 300 6.155393 GGAGAGGAGTTAAATGAGGAGAGAAA 59.845 42.308 0.00 0.00 0.00 2.52
300 301 7.181569 AGAGGAGTTAAATGAGGAGAGAAAG 57.818 40.000 0.00 0.00 0.00 2.62
301 302 6.156083 AGAGGAGTTAAATGAGGAGAGAAAGG 59.844 42.308 0.00 0.00 0.00 3.11
302 303 6.026186 AGGAGTTAAATGAGGAGAGAAAGGA 58.974 40.000 0.00 0.00 0.00 3.36
303 304 6.070481 AGGAGTTAAATGAGGAGAGAAAGGAC 60.070 42.308 0.00 0.00 0.00 3.85
304 305 6.070481 GGAGTTAAATGAGGAGAGAAAGGACT 60.070 42.308 0.00 0.00 0.00 3.85
305 306 7.124448 GGAGTTAAATGAGGAGAGAAAGGACTA 59.876 40.741 0.00 0.00 0.00 2.59
306 307 8.437274 AGTTAAATGAGGAGAGAAAGGACTAA 57.563 34.615 0.00 0.00 0.00 2.24
307 308 9.052365 AGTTAAATGAGGAGAGAAAGGACTAAT 57.948 33.333 0.00 0.00 0.00 1.73
308 309 9.320352 GTTAAATGAGGAGAGAAAGGACTAATC 57.680 37.037 0.00 0.00 0.00 1.75
309 310 6.493189 AATGAGGAGAGAAAGGACTAATCC 57.507 41.667 0.00 0.00 46.69 3.01
324 325 7.761038 GGACTAATCCACATTTTAATAGGGG 57.239 40.000 0.00 0.00 45.47 4.79
325 326 7.295340 GGACTAATCCACATTTTAATAGGGGT 58.705 38.462 0.00 0.00 45.47 4.95
326 327 8.442374 GGACTAATCCACATTTTAATAGGGGTA 58.558 37.037 0.00 0.00 45.47 3.69
329 330 9.462606 CTAATCCACATTTTAATAGGGGTATCC 57.537 37.037 0.00 0.00 0.00 2.59
369 370 4.505808 GTCTCAAGACTAGTTTTAGCCCC 58.494 47.826 0.00 0.00 41.65 5.80
370 371 4.223255 GTCTCAAGACTAGTTTTAGCCCCT 59.777 45.833 0.00 0.00 41.65 4.79
371 372 4.466726 TCTCAAGACTAGTTTTAGCCCCTC 59.533 45.833 0.00 0.00 0.00 4.30
372 373 4.426704 TCAAGACTAGTTTTAGCCCCTCT 58.573 43.478 0.00 0.00 0.00 3.69
373 374 4.844655 TCAAGACTAGTTTTAGCCCCTCTT 59.155 41.667 0.00 0.00 0.00 2.85
374 375 5.309806 TCAAGACTAGTTTTAGCCCCTCTTT 59.690 40.000 0.00 0.00 0.00 2.52
375 376 6.499350 TCAAGACTAGTTTTAGCCCCTCTTTA 59.501 38.462 0.00 0.00 0.00 1.85
376 377 6.547930 AGACTAGTTTTAGCCCCTCTTTAG 57.452 41.667 0.00 0.00 0.00 1.85
377 378 6.024247 AGACTAGTTTTAGCCCCTCTTTAGT 58.976 40.000 0.00 0.00 0.00 2.24
378 379 6.154877 AGACTAGTTTTAGCCCCTCTTTAGTC 59.845 42.308 0.00 0.00 36.42 2.59
379 380 5.783875 ACTAGTTTTAGCCCCTCTTTAGTCA 59.216 40.000 0.00 0.00 0.00 3.41
380 381 5.578157 AGTTTTAGCCCCTCTTTAGTCAA 57.422 39.130 0.00 0.00 0.00 3.18
381 382 5.561679 AGTTTTAGCCCCTCTTTAGTCAAG 58.438 41.667 0.00 0.00 0.00 3.02
382 383 4.569719 TTTAGCCCCTCTTTAGTCAAGG 57.430 45.455 0.00 0.00 32.64 3.61
386 387 2.115343 CCCTCTTTAGTCAAGGGTGC 57.885 55.000 0.00 0.00 44.11 5.01
387 388 1.630878 CCCTCTTTAGTCAAGGGTGCT 59.369 52.381 0.00 0.00 44.11 4.40
388 389 2.040412 CCCTCTTTAGTCAAGGGTGCTT 59.960 50.000 0.00 0.00 44.11 3.91
389 390 3.077359 CCTCTTTAGTCAAGGGTGCTTG 58.923 50.000 0.00 0.00 29.56 4.01
390 391 3.077359 CTCTTTAGTCAAGGGTGCTTGG 58.923 50.000 0.00 0.00 35.23 3.61
391 392 2.708861 TCTTTAGTCAAGGGTGCTTGGA 59.291 45.455 0.00 0.00 35.23 3.53
392 393 3.137544 TCTTTAGTCAAGGGTGCTTGGAA 59.862 43.478 0.00 0.00 35.23 3.53
393 394 3.806949 TTAGTCAAGGGTGCTTGGAAT 57.193 42.857 0.00 0.00 35.23 3.01
394 395 2.683211 AGTCAAGGGTGCTTGGAATT 57.317 45.000 0.00 0.00 35.23 2.17
395 396 2.962859 AGTCAAGGGTGCTTGGAATTT 58.037 42.857 0.00 0.00 35.23 1.82
396 397 3.308401 AGTCAAGGGTGCTTGGAATTTT 58.692 40.909 0.00 0.00 35.23 1.82
397 398 4.479158 AGTCAAGGGTGCTTGGAATTTTA 58.521 39.130 0.00 0.00 35.23 1.52
398 399 4.524328 AGTCAAGGGTGCTTGGAATTTTAG 59.476 41.667 0.00 0.00 35.23 1.85
399 400 3.258123 TCAAGGGTGCTTGGAATTTTAGC 59.742 43.478 0.00 0.00 35.23 3.09
400 401 2.179427 AGGGTGCTTGGAATTTTAGCC 58.821 47.619 0.00 0.00 34.03 3.93
401 402 2.179427 GGGTGCTTGGAATTTTAGCCT 58.821 47.619 0.00 0.00 34.03 4.58
402 403 2.166459 GGGTGCTTGGAATTTTAGCCTC 59.834 50.000 0.00 0.00 34.03 4.70
403 404 3.092301 GGTGCTTGGAATTTTAGCCTCT 58.908 45.455 0.00 0.00 34.03 3.69
404 405 3.511540 GGTGCTTGGAATTTTAGCCTCTT 59.488 43.478 0.00 0.00 34.03 2.85
405 406 4.705023 GGTGCTTGGAATTTTAGCCTCTTA 59.295 41.667 0.00 0.00 34.03 2.10
406 407 5.185056 GGTGCTTGGAATTTTAGCCTCTTAA 59.815 40.000 0.00 0.00 34.03 1.85
407 408 6.295067 GGTGCTTGGAATTTTAGCCTCTTAAA 60.295 38.462 0.00 0.00 34.03 1.52
408 409 6.808704 GTGCTTGGAATTTTAGCCTCTTAAAG 59.191 38.462 0.00 0.00 34.03 1.85
409 410 6.719370 TGCTTGGAATTTTAGCCTCTTAAAGA 59.281 34.615 0.00 0.00 34.03 2.52
410 411 7.094205 TGCTTGGAATTTTAGCCTCTTAAAGAG 60.094 37.037 0.00 0.00 41.96 2.85
411 412 7.121315 GCTTGGAATTTTAGCCTCTTAAAGAGA 59.879 37.037 0.00 0.00 45.07 3.10
412 413 7.923414 TGGAATTTTAGCCTCTTAAAGAGAC 57.077 36.000 0.00 0.00 45.07 3.36
413 414 7.690256 TGGAATTTTAGCCTCTTAAAGAGACT 58.310 34.615 0.00 0.00 45.07 3.24
414 415 8.822805 TGGAATTTTAGCCTCTTAAAGAGACTA 58.177 33.333 0.00 0.00 45.07 2.59
415 416 9.839817 GGAATTTTAGCCTCTTAAAGAGACTAT 57.160 33.333 0.00 0.00 45.07 2.12
423 424 9.878667 AGCCTCTTAAAGAGACTATTTTTAGTC 57.121 33.333 0.00 5.24 45.07 2.59
424 425 9.654663 GCCTCTTAAAGAGACTATTTTTAGTCA 57.345 33.333 13.86 0.00 45.07 3.41
445 446 8.990163 AGTCAAACTAAAATAAGTCCTTTGGA 57.010 30.769 0.00 0.00 0.00 3.53
446 447 9.588096 AGTCAAACTAAAATAAGTCCTTTGGAT 57.412 29.630 0.00 0.00 32.73 3.41
447 448 9.841880 GTCAAACTAAAATAAGTCCTTTGGATC 57.158 33.333 0.00 0.00 32.73 3.36
448 449 9.020731 TCAAACTAAAATAAGTCCTTTGGATCC 57.979 33.333 4.20 4.20 32.73 3.36
449 450 8.802267 CAAACTAAAATAAGTCCTTTGGATCCA 58.198 33.333 11.44 11.44 32.73 3.41
450 451 8.950007 AACTAAAATAAGTCCTTTGGATCCAA 57.050 30.769 23.63 23.63 32.73 3.53
451 452 8.581253 ACTAAAATAAGTCCTTTGGATCCAAG 57.419 34.615 25.69 18.97 37.24 3.61
452 453 5.921962 AAATAAGTCCTTTGGATCCAAGC 57.078 39.130 25.69 16.98 37.24 4.01
453 454 2.978156 AAGTCCTTTGGATCCAAGCA 57.022 45.000 25.69 12.60 37.24 3.91
454 455 2.206576 AGTCCTTTGGATCCAAGCAC 57.793 50.000 25.69 21.43 37.24 4.40
455 456 1.177401 GTCCTTTGGATCCAAGCACC 58.823 55.000 25.69 12.73 37.24 5.01
456 457 0.039618 TCCTTTGGATCCAAGCACCC 59.960 55.000 25.69 0.00 37.24 4.61
457 458 0.040204 CCTTTGGATCCAAGCACCCT 59.960 55.000 25.69 0.00 37.24 4.34
482 483 8.589335 TTAGTTAACTAAGTTGAGAAGCACTG 57.411 34.615 21.52 0.00 33.83 3.66
485 486 3.808728 ACTAAGTTGAGAAGCACTGCAA 58.191 40.909 3.30 0.00 0.00 4.08
487 488 2.338577 AGTTGAGAAGCACTGCAACT 57.661 45.000 3.30 0.00 39.57 3.16
490 491 0.469494 TGAGAAGCACTGCAACTCCA 59.531 50.000 18.34 8.89 34.27 3.86
520 534 4.443034 GGCTATGGTTCCTACAAGTCGATT 60.443 45.833 0.00 0.00 0.00 3.34
525 539 3.259902 GTTCCTACAAGTCGATTGACCC 58.740 50.000 9.62 0.00 46.74 4.46
549 563 0.459585 ATCACGTGGTATGGTGTCGC 60.460 55.000 17.00 0.00 35.67 5.19
555 569 1.195442 TGGTATGGTGTCGCCTTCCA 61.195 55.000 3.62 6.82 38.35 3.53
561 575 0.811616 GGTGTCGCCTTCCATAGCAG 60.812 60.000 0.00 0.00 0.00 4.24
563 577 1.153369 GTCGCCTTCCATAGCAGCA 60.153 57.895 0.00 0.00 0.00 4.41
572 586 2.371306 TCCATAGCAGCAGTACGTGTA 58.629 47.619 0.00 0.00 0.00 2.90
604 618 1.293062 ATCCAGTCCAGCCAATCAGT 58.707 50.000 0.00 0.00 0.00 3.41
692 706 4.436584 GCATCTTCTCTGCACATAACACAC 60.437 45.833 0.00 0.00 39.46 3.82
699 713 1.851021 GCACATAACACACTGCCGCA 61.851 55.000 0.00 0.00 0.00 5.69
709 723 2.346545 CACACTGCCGCATATATCGATG 59.653 50.000 8.54 0.00 0.00 3.84
723 737 8.516234 GCATATATCGATGTCCCCTATAAGTAG 58.484 40.741 8.54 0.00 0.00 2.57
724 738 9.794719 CATATATCGATGTCCCCTATAAGTAGA 57.205 37.037 8.54 0.00 0.00 2.59
898 922 7.569297 CGTATTTGGCTTATTAGAAACGCATA 58.431 34.615 0.00 0.00 0.00 3.14
939 963 5.417580 AGTTTCAGTTTTGGTGCTACTTTCA 59.582 36.000 0.00 0.00 0.00 2.69
942 966 4.335315 TCAGTTTTGGTGCTACTTTCACTG 59.665 41.667 0.00 0.00 34.97 3.66
953 977 4.617645 GCTACTTTCACTGTAAGACTGACG 59.382 45.833 2.65 0.00 37.43 4.35
961 985 5.297527 TCACTGTAAGACTGACGTGTTTCTA 59.702 40.000 0.00 0.00 37.43 2.10
1033 1057 2.283604 TCCCAGCTAGCACCGACA 60.284 61.111 18.83 0.00 0.00 4.35
1371 1395 6.129194 GCATGGATTTGTGTAACTTTTCGTTC 60.129 38.462 0.00 0.00 38.04 3.95
1377 1401 4.183101 TGTGTAACTTTTCGTTCCGTCTT 58.817 39.130 0.00 0.00 38.04 3.01
1378 1402 4.630940 TGTGTAACTTTTCGTTCCGTCTTT 59.369 37.500 0.00 0.00 38.04 2.52
1379 1403 5.122082 TGTGTAACTTTTCGTTCCGTCTTTT 59.878 36.000 0.00 0.00 38.04 2.27
1380 1404 6.023435 GTGTAACTTTTCGTTCCGTCTTTTT 58.977 36.000 0.00 0.00 37.05 1.94
1642 1667 7.186570 ACATGCAGAGCACCATATATACATA 57.813 36.000 0.00 0.00 43.04 2.29
1649 1674 7.859875 CAGAGCACCATATATACATAGATGACG 59.140 40.741 5.60 0.00 34.72 4.35
1664 1689 4.003648 AGATGACGGTCAGTTCCAAATTC 58.996 43.478 16.84 5.81 0.00 2.17
1665 1690 3.201353 TGACGGTCAGTTCCAAATTCA 57.799 42.857 6.76 0.00 0.00 2.57
1818 1859 5.285607 GGTGAACTATCTCGTTTTAGACACG 59.714 44.000 0.00 0.00 39.08 4.49
2044 2087 5.208463 TGTCACTAGTACACATTCTTGCA 57.792 39.130 0.00 0.00 0.00 4.08
2069 2113 9.689976 CAATGGAATTCTTAAAACACACACATA 57.310 29.630 5.23 0.00 31.22 2.29
2074 2118 8.948853 AATTCTTAAAACACACACATATCACG 57.051 30.769 0.00 0.00 0.00 4.35
2080 2124 2.480037 ACACACACATATCACGTGCTTG 59.520 45.455 11.67 10.43 37.93 4.01
2111 2155 3.386768 TCTCGAGACCTTCCTTTGTTG 57.613 47.619 12.08 0.00 0.00 3.33
2137 2181 7.517259 GCAAGAAAACACACAATTTGAAGATCC 60.517 37.037 2.79 0.00 0.00 3.36
2138 2182 6.515832 AGAAAACACACAATTTGAAGATCCC 58.484 36.000 2.79 0.00 0.00 3.85
2153 2197 1.178534 ATCCCGTTGGTGGCAAGTTG 61.179 55.000 0.00 0.00 0.00 3.16
2159 2203 2.605338 CGTTGGTGGCAAGTTGAAGATG 60.605 50.000 7.16 0.00 0.00 2.90
2177 2221 2.099141 TGGATCCGCTCAAAGACAAG 57.901 50.000 7.39 0.00 0.00 3.16
2189 2233 7.807907 CCGCTCAAAGACAAGTTTATTTGTAAT 59.192 33.333 0.00 0.00 41.15 1.89
2190 2234 9.820229 CGCTCAAAGACAAGTTTATTTGTAATA 57.180 29.630 0.00 0.00 41.15 0.98
2196 2240 9.715121 AAGACAAGTTTATTTGTAATAGTCCGA 57.285 29.630 0.00 0.00 41.15 4.55
2197 2241 9.715121 AGACAAGTTTATTTGTAATAGTCCGAA 57.285 29.630 0.00 0.00 41.15 4.30
2203 2247 9.712359 GTTTATTTGTAATAGTCCGAATTGTCC 57.288 33.333 0.00 0.00 0.00 4.02
2204 2248 9.451002 TTTATTTGTAATAGTCCGAATTGTCCA 57.549 29.630 0.00 0.00 0.00 4.02
2205 2249 7.931578 ATTTGTAATAGTCCGAATTGTCCAA 57.068 32.000 0.00 0.00 0.00 3.53
2206 2250 7.931578 TTTGTAATAGTCCGAATTGTCCAAT 57.068 32.000 0.00 0.00 0.00 3.16
2207 2251 9.621629 ATTTGTAATAGTCCGAATTGTCCAATA 57.378 29.630 0.00 0.00 0.00 1.90
2208 2252 9.621629 TTTGTAATAGTCCGAATTGTCCAATAT 57.378 29.630 0.00 0.00 0.00 1.28
2210 2254 9.701098 TGTAATAGTCCGAATTGTCCAATATAC 57.299 33.333 0.00 0.00 0.00 1.47
2211 2255 9.701098 GTAATAGTCCGAATTGTCCAATATACA 57.299 33.333 0.00 0.00 0.00 2.29
2213 2257 9.436957 AATAGTCCGAATTGTCCAATATACATC 57.563 33.333 0.00 0.00 0.00 3.06
2214 2258 6.231211 AGTCCGAATTGTCCAATATACATCC 58.769 40.000 0.00 0.00 0.00 3.51
2215 2259 5.411669 GTCCGAATTGTCCAATATACATCCC 59.588 44.000 0.00 0.00 0.00 3.85
2216 2260 5.309543 TCCGAATTGTCCAATATACATCCCT 59.690 40.000 0.00 0.00 0.00 4.20
2217 2261 5.412594 CCGAATTGTCCAATATACATCCCTG 59.587 44.000 0.00 0.00 0.00 4.45
2218 2262 6.230472 CGAATTGTCCAATATACATCCCTGA 58.770 40.000 0.00 0.00 0.00 3.86
2219 2263 6.710295 CGAATTGTCCAATATACATCCCTGAA 59.290 38.462 0.00 0.00 0.00 3.02
2220 2264 7.095060 CGAATTGTCCAATATACATCCCTGAAG 60.095 40.741 0.00 0.00 0.00 3.02
2221 2265 4.973168 TGTCCAATATACATCCCTGAAGC 58.027 43.478 0.00 0.00 0.00 3.86
2222 2266 4.202461 TGTCCAATATACATCCCTGAAGCC 60.202 45.833 0.00 0.00 0.00 4.35
2223 2267 3.330701 TCCAATATACATCCCTGAAGCCC 59.669 47.826 0.00 0.00 0.00 5.19
2224 2268 3.562176 CCAATATACATCCCTGAAGCCCC 60.562 52.174 0.00 0.00 0.00 5.80
2225 2269 2.505672 TATACATCCCTGAAGCCCCA 57.494 50.000 0.00 0.00 0.00 4.96
2226 2270 0.846693 ATACATCCCTGAAGCCCCAC 59.153 55.000 0.00 0.00 0.00 4.61
2227 2271 1.279025 TACATCCCTGAAGCCCCACC 61.279 60.000 0.00 0.00 0.00 4.61
2228 2272 3.023735 ATCCCTGAAGCCCCACCC 61.024 66.667 0.00 0.00 0.00 4.61
2229 2273 3.908712 ATCCCTGAAGCCCCACCCA 62.909 63.158 0.00 0.00 0.00 4.51
2230 2274 3.589542 CCCTGAAGCCCCACCCAA 61.590 66.667 0.00 0.00 0.00 4.12
2231 2275 2.772924 CCTGAAGCCCCACCCAAT 59.227 61.111 0.00 0.00 0.00 3.16
2232 2276 1.580066 CCCTGAAGCCCCACCCAATA 61.580 60.000 0.00 0.00 0.00 1.90
2233 2277 0.557729 CCTGAAGCCCCACCCAATAT 59.442 55.000 0.00 0.00 0.00 1.28
2234 2278 1.780309 CCTGAAGCCCCACCCAATATA 59.220 52.381 0.00 0.00 0.00 0.86
2235 2279 2.379907 CCTGAAGCCCCACCCAATATAT 59.620 50.000 0.00 0.00 0.00 0.86
2236 2280 3.562176 CCTGAAGCCCCACCCAATATATC 60.562 52.174 0.00 0.00 0.00 1.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.646653 TCATATGTAGAACGCATTGGAATCTC 59.353 38.462 1.90 0.00 0.00 2.75
1 2 6.524734 TCATATGTAGAACGCATTGGAATCT 58.475 36.000 1.90 0.00 0.00 2.40
2 3 6.785488 TCATATGTAGAACGCATTGGAATC 57.215 37.500 1.90 0.00 0.00 2.52
3 4 6.293626 GCTTCATATGTAGAACGCATTGGAAT 60.294 38.462 13.07 0.00 0.00 3.01
4 5 5.007626 GCTTCATATGTAGAACGCATTGGAA 59.992 40.000 13.07 0.00 0.00 3.53
5 6 4.511454 GCTTCATATGTAGAACGCATTGGA 59.489 41.667 13.07 0.00 0.00 3.53
6 7 4.273235 TGCTTCATATGTAGAACGCATTGG 59.727 41.667 13.07 0.00 30.15 3.16
7 8 5.408204 TGCTTCATATGTAGAACGCATTG 57.592 39.130 13.07 0.00 30.15 2.82
8 9 6.094048 ACTTTGCTTCATATGTAGAACGCATT 59.906 34.615 13.07 0.00 32.96 3.56
9 10 5.586243 ACTTTGCTTCATATGTAGAACGCAT 59.414 36.000 13.07 0.00 32.96 4.73
10 11 4.935205 ACTTTGCTTCATATGTAGAACGCA 59.065 37.500 13.07 1.76 31.87 5.24
11 12 5.063438 TCACTTTGCTTCATATGTAGAACGC 59.937 40.000 13.07 0.00 0.00 4.84
12 13 6.311445 ACTCACTTTGCTTCATATGTAGAACG 59.689 38.462 13.07 5.42 0.00 3.95
13 14 7.331934 TCACTCACTTTGCTTCATATGTAGAAC 59.668 37.037 13.07 0.00 0.00 3.01
14 15 7.386059 TCACTCACTTTGCTTCATATGTAGAA 58.614 34.615 13.07 0.00 0.00 2.10
15 16 6.935167 TCACTCACTTTGCTTCATATGTAGA 58.065 36.000 13.07 0.00 0.00 2.59
16 17 7.601073 TTCACTCACTTTGCTTCATATGTAG 57.399 36.000 5.04 5.04 0.00 2.74
17 18 8.043113 AGATTCACTCACTTTGCTTCATATGTA 58.957 33.333 1.90 0.00 0.00 2.29
18 19 6.883217 AGATTCACTCACTTTGCTTCATATGT 59.117 34.615 1.90 0.00 0.00 2.29
19 20 7.317842 AGATTCACTCACTTTGCTTCATATG 57.682 36.000 0.00 0.00 0.00 1.78
20 21 8.043113 TGTAGATTCACTCACTTTGCTTCATAT 58.957 33.333 0.00 0.00 0.00 1.78
21 22 7.331934 GTGTAGATTCACTCACTTTGCTTCATA 59.668 37.037 0.00 0.00 35.68 2.15
22 23 6.148480 GTGTAGATTCACTCACTTTGCTTCAT 59.852 38.462 0.00 0.00 35.68 2.57
23 24 5.466728 GTGTAGATTCACTCACTTTGCTTCA 59.533 40.000 0.00 0.00 35.68 3.02
24 25 5.698545 AGTGTAGATTCACTCACTTTGCTTC 59.301 40.000 0.00 0.00 44.07 3.86
25 26 5.468072 CAGTGTAGATTCACTCACTTTGCTT 59.532 40.000 0.00 0.00 45.37 3.91
26 27 4.993584 CAGTGTAGATTCACTCACTTTGCT 59.006 41.667 0.00 0.00 45.37 3.91
27 28 4.752101 ACAGTGTAGATTCACTCACTTTGC 59.248 41.667 0.00 0.00 45.37 3.68
28 29 6.851222 AACAGTGTAGATTCACTCACTTTG 57.149 37.500 0.00 0.00 45.37 2.77
29 30 8.958119 TTTAACAGTGTAGATTCACTCACTTT 57.042 30.769 0.00 0.00 45.37 2.66
30 31 8.993121 CATTTAACAGTGTAGATTCACTCACTT 58.007 33.333 0.00 0.00 45.37 3.16
31 32 8.150945 ACATTTAACAGTGTAGATTCACTCACT 58.849 33.333 0.00 0.00 45.37 3.41
32 33 8.223769 CACATTTAACAGTGTAGATTCACTCAC 58.776 37.037 0.00 0.00 45.37 3.51
33 34 7.931407 ACACATTTAACAGTGTAGATTCACTCA 59.069 33.333 9.68 0.00 46.32 3.41
34 35 8.311650 ACACATTTAACAGTGTAGATTCACTC 57.688 34.615 9.68 0.00 46.32 3.51
46 47 9.692749 CGGATGTATATAGACACATTTAACAGT 57.307 33.333 1.52 0.00 35.55 3.55
47 48 9.692749 ACGGATGTATATAGACACATTTAACAG 57.307 33.333 1.52 0.00 35.55 3.16
48 49 9.471084 CACGGATGTATATAGACACATTTAACA 57.529 33.333 1.52 0.00 35.55 2.41
49 50 9.472361 ACACGGATGTATATAGACACATTTAAC 57.528 33.333 1.52 0.00 37.26 2.01
65 66 2.574450 TGCGGACTATACACGGATGTA 58.426 47.619 0.00 0.00 45.37 2.29
66 67 1.395635 TGCGGACTATACACGGATGT 58.604 50.000 0.00 0.00 43.30 3.06
67 68 2.724977 ATGCGGACTATACACGGATG 57.275 50.000 0.00 0.00 37.29 3.51
68 69 2.626266 TCAATGCGGACTATACACGGAT 59.374 45.455 0.00 0.00 40.35 4.18
69 70 2.025898 TCAATGCGGACTATACACGGA 58.974 47.619 0.00 0.00 0.00 4.69
70 71 2.502213 TCAATGCGGACTATACACGG 57.498 50.000 0.00 0.00 0.00 4.94
71 72 4.745125 AGATTTCAATGCGGACTATACACG 59.255 41.667 0.00 0.00 0.00 4.49
72 73 5.986135 AGAGATTTCAATGCGGACTATACAC 59.014 40.000 0.00 0.00 0.00 2.90
73 74 6.161855 AGAGATTTCAATGCGGACTATACA 57.838 37.500 0.00 0.00 0.00 2.29
74 75 8.589335 TTTAGAGATTTCAATGCGGACTATAC 57.411 34.615 0.00 0.00 0.00 1.47
75 76 9.042008 GTTTTAGAGATTTCAATGCGGACTATA 57.958 33.333 0.00 0.00 0.00 1.31
76 77 7.254455 CGTTTTAGAGATTTCAATGCGGACTAT 60.254 37.037 0.00 0.00 0.00 2.12
77 78 6.035650 CGTTTTAGAGATTTCAATGCGGACTA 59.964 38.462 0.00 0.00 0.00 2.59
78 79 5.163854 CGTTTTAGAGATTTCAATGCGGACT 60.164 40.000 0.00 0.00 0.00 3.85
79 80 5.022021 CGTTTTAGAGATTTCAATGCGGAC 58.978 41.667 0.00 0.00 0.00 4.79
80 81 4.094294 CCGTTTTAGAGATTTCAATGCGGA 59.906 41.667 0.00 0.00 36.83 5.54
81 82 4.094294 TCCGTTTTAGAGATTTCAATGCGG 59.906 41.667 0.00 0.00 36.14 5.69
82 83 5.216566 TCCGTTTTAGAGATTTCAATGCG 57.783 39.130 0.00 0.00 0.00 4.73
83 84 6.030228 CCTTCCGTTTTAGAGATTTCAATGC 58.970 40.000 0.00 0.00 0.00 3.56
84 85 7.119846 ACTCCTTCCGTTTTAGAGATTTCAATG 59.880 37.037 0.00 0.00 0.00 2.82
85 86 7.168905 ACTCCTTCCGTTTTAGAGATTTCAAT 58.831 34.615 0.00 0.00 0.00 2.57
86 87 6.531021 ACTCCTTCCGTTTTAGAGATTTCAA 58.469 36.000 0.00 0.00 0.00 2.69
87 88 6.110411 ACTCCTTCCGTTTTAGAGATTTCA 57.890 37.500 0.00 0.00 0.00 2.69
88 89 7.321908 ACTACTCCTTCCGTTTTAGAGATTTC 58.678 38.462 0.00 0.00 0.00 2.17
89 90 7.242322 ACTACTCCTTCCGTTTTAGAGATTT 57.758 36.000 0.00 0.00 0.00 2.17
90 91 6.854091 ACTACTCCTTCCGTTTTAGAGATT 57.146 37.500 0.00 0.00 0.00 2.40
91 92 6.854091 AACTACTCCTTCCGTTTTAGAGAT 57.146 37.500 0.00 0.00 0.00 2.75
92 93 7.765695 TTAACTACTCCTTCCGTTTTAGAGA 57.234 36.000 0.00 0.00 0.00 3.10
93 94 7.544915 CCTTTAACTACTCCTTCCGTTTTAGAG 59.455 40.741 0.00 0.00 0.00 2.43
94 95 7.381323 CCTTTAACTACTCCTTCCGTTTTAGA 58.619 38.462 0.00 0.00 0.00 2.10
95 96 6.592994 CCCTTTAACTACTCCTTCCGTTTTAG 59.407 42.308 0.00 0.00 0.00 1.85
96 97 6.043127 ACCCTTTAACTACTCCTTCCGTTTTA 59.957 38.462 0.00 0.00 0.00 1.52
97 98 5.163163 ACCCTTTAACTACTCCTTCCGTTTT 60.163 40.000 0.00 0.00 0.00 2.43
98 99 4.349048 ACCCTTTAACTACTCCTTCCGTTT 59.651 41.667 0.00 0.00 0.00 3.60
99 100 3.906218 ACCCTTTAACTACTCCTTCCGTT 59.094 43.478 0.00 0.00 0.00 4.44
100 101 3.260128 CACCCTTTAACTACTCCTTCCGT 59.740 47.826 0.00 0.00 0.00 4.69
101 102 3.858247 CACCCTTTAACTACTCCTTCCG 58.142 50.000 0.00 0.00 0.00 4.30
102 103 3.263681 AGCACCCTTTAACTACTCCTTCC 59.736 47.826 0.00 0.00 0.00 3.46
103 104 4.554960 AGCACCCTTTAACTACTCCTTC 57.445 45.455 0.00 0.00 0.00 3.46
104 105 4.506802 CCAAGCACCCTTTAACTACTCCTT 60.507 45.833 0.00 0.00 0.00 3.36
105 106 3.009143 CCAAGCACCCTTTAACTACTCCT 59.991 47.826 0.00 0.00 0.00 3.69
106 107 3.008704 TCCAAGCACCCTTTAACTACTCC 59.991 47.826 0.00 0.00 0.00 3.85
107 108 4.281898 TCCAAGCACCCTTTAACTACTC 57.718 45.455 0.00 0.00 0.00 2.59
108 109 4.929146 ATCCAAGCACCCTTTAACTACT 57.071 40.909 0.00 0.00 0.00 2.57
109 110 4.569564 CGTATCCAAGCACCCTTTAACTAC 59.430 45.833 0.00 0.00 0.00 2.73
110 111 4.223477 ACGTATCCAAGCACCCTTTAACTA 59.777 41.667 0.00 0.00 0.00 2.24
111 112 3.008704 ACGTATCCAAGCACCCTTTAACT 59.991 43.478 0.00 0.00 0.00 2.24
112 113 3.340928 ACGTATCCAAGCACCCTTTAAC 58.659 45.455 0.00 0.00 0.00 2.01
113 114 3.706600 ACGTATCCAAGCACCCTTTAA 57.293 42.857 0.00 0.00 0.00 1.52
114 115 3.706600 AACGTATCCAAGCACCCTTTA 57.293 42.857 0.00 0.00 0.00 1.85
115 116 2.579410 AACGTATCCAAGCACCCTTT 57.421 45.000 0.00 0.00 0.00 3.11
116 117 2.579410 AAACGTATCCAAGCACCCTT 57.421 45.000 0.00 0.00 0.00 3.95
117 118 2.579410 AAAACGTATCCAAGCACCCT 57.421 45.000 0.00 0.00 0.00 4.34
118 119 3.340928 ACTAAAACGTATCCAAGCACCC 58.659 45.455 0.00 0.00 0.00 4.61
119 120 4.251268 AGACTAAAACGTATCCAAGCACC 58.749 43.478 0.00 0.00 0.00 5.01
120 121 4.927425 TGAGACTAAAACGTATCCAAGCAC 59.073 41.667 0.00 0.00 0.00 4.40
121 122 5.142061 TGAGACTAAAACGTATCCAAGCA 57.858 39.130 0.00 0.00 0.00 3.91
122 123 5.810587 TCATGAGACTAAAACGTATCCAAGC 59.189 40.000 0.00 0.00 0.00 4.01
123 124 7.223058 GTCATGAGACTAAAACGTATCCAAG 57.777 40.000 0.00 0.00 41.64 3.61
138 139 6.071278 AGTCCCACTACTTTTAGTCATGAGAC 60.071 42.308 0.00 0.00 45.31 3.36
139 140 6.017192 AGTCCCACTACTTTTAGTCATGAGA 58.983 40.000 0.00 0.00 36.31 3.27
140 141 6.287589 AGTCCCACTACTTTTAGTCATGAG 57.712 41.667 0.00 0.00 36.31 2.90
141 142 7.786046 TTAGTCCCACTACTTTTAGTCATGA 57.214 36.000 0.00 0.00 36.31 3.07
142 143 8.718734 GTTTTAGTCCCACTACTTTTAGTCATG 58.281 37.037 0.00 0.00 36.31 3.07
143 144 8.657712 AGTTTTAGTCCCACTACTTTTAGTCAT 58.342 33.333 0.00 0.00 36.31 3.06
144 145 8.026396 AGTTTTAGTCCCACTACTTTTAGTCA 57.974 34.615 0.00 0.00 36.31 3.41
145 146 8.771766 CAAGTTTTAGTCCCACTACTTTTAGTC 58.228 37.037 0.00 0.00 36.31 2.59
146 147 7.228108 GCAAGTTTTAGTCCCACTACTTTTAGT 59.772 37.037 0.00 0.00 39.30 2.24
147 148 7.444487 AGCAAGTTTTAGTCCCACTACTTTTAG 59.556 37.037 0.00 0.00 28.93 1.85
148 149 7.284820 AGCAAGTTTTAGTCCCACTACTTTTA 58.715 34.615 0.00 0.00 28.93 1.52
149 150 6.127101 AGCAAGTTTTAGTCCCACTACTTTT 58.873 36.000 0.00 0.00 28.93 2.27
150 151 5.691896 AGCAAGTTTTAGTCCCACTACTTT 58.308 37.500 0.00 0.00 28.93 2.66
151 152 5.306114 AGCAAGTTTTAGTCCCACTACTT 57.694 39.130 0.00 0.00 28.93 2.24
152 153 4.976540 AGCAAGTTTTAGTCCCACTACT 57.023 40.909 0.00 0.00 28.93 2.57
153 154 4.630505 GCTAGCAAGTTTTAGTCCCACTAC 59.369 45.833 10.63 0.00 28.93 2.73
154 155 4.323257 GGCTAGCAAGTTTTAGTCCCACTA 60.323 45.833 18.24 0.00 0.00 2.74
155 156 3.559384 GGCTAGCAAGTTTTAGTCCCACT 60.559 47.826 18.24 0.00 0.00 4.00
156 157 2.747989 GGCTAGCAAGTTTTAGTCCCAC 59.252 50.000 18.24 0.00 0.00 4.61
157 158 2.642807 AGGCTAGCAAGTTTTAGTCCCA 59.357 45.455 18.24 0.00 0.00 4.37
158 159 3.271729 GAGGCTAGCAAGTTTTAGTCCC 58.728 50.000 18.24 0.00 0.00 4.46
159 160 3.685272 GTGAGGCTAGCAAGTTTTAGTCC 59.315 47.826 18.24 0.00 0.00 3.85
160 161 4.570930 AGTGAGGCTAGCAAGTTTTAGTC 58.429 43.478 18.24 0.00 0.00 2.59
161 162 4.040461 TGAGTGAGGCTAGCAAGTTTTAGT 59.960 41.667 18.24 0.00 0.00 2.24
162 163 4.569943 TGAGTGAGGCTAGCAAGTTTTAG 58.430 43.478 18.24 0.00 0.00 1.85
163 164 4.617253 TGAGTGAGGCTAGCAAGTTTTA 57.383 40.909 18.24 0.00 0.00 1.52
164 165 3.492102 TGAGTGAGGCTAGCAAGTTTT 57.508 42.857 18.24 0.00 0.00 2.43
165 166 3.341823 CATGAGTGAGGCTAGCAAGTTT 58.658 45.455 18.24 0.00 0.00 2.66
166 167 2.938756 GCATGAGTGAGGCTAGCAAGTT 60.939 50.000 18.24 0.00 0.00 2.66
167 168 1.406614 GCATGAGTGAGGCTAGCAAGT 60.407 52.381 18.24 4.12 0.00 3.16
168 169 1.134461 AGCATGAGTGAGGCTAGCAAG 60.134 52.381 18.24 0.00 40.84 4.01
169 170 0.907486 AGCATGAGTGAGGCTAGCAA 59.093 50.000 18.24 0.00 40.84 3.91
170 171 0.907486 AAGCATGAGTGAGGCTAGCA 59.093 50.000 18.24 0.00 42.15 3.49
171 172 1.297664 CAAGCATGAGTGAGGCTAGC 58.702 55.000 6.04 6.04 42.15 3.42
172 173 1.483827 TCCAAGCATGAGTGAGGCTAG 59.516 52.381 0.00 0.00 42.15 3.42
173 174 1.571955 TCCAAGCATGAGTGAGGCTA 58.428 50.000 0.00 0.00 42.15 3.93
174 175 0.917533 ATCCAAGCATGAGTGAGGCT 59.082 50.000 0.00 0.00 45.93 4.58
175 176 1.307097 GATCCAAGCATGAGTGAGGC 58.693 55.000 0.00 0.00 0.00 4.70
176 177 1.211212 TGGATCCAAGCATGAGTGAGG 59.789 52.381 13.46 0.00 0.00 3.86
177 178 2.704464 TGGATCCAAGCATGAGTGAG 57.296 50.000 13.46 0.00 0.00 3.51
178 179 3.438216 TTTGGATCCAAGCATGAGTGA 57.562 42.857 25.69 6.45 37.24 3.41
179 180 4.885907 AGTATTTGGATCCAAGCATGAGTG 59.114 41.667 25.69 0.00 37.24 3.51
180 181 5.121380 AGTATTTGGATCCAAGCATGAGT 57.879 39.130 25.69 11.33 37.24 3.41
181 182 7.500227 TCTTTAGTATTTGGATCCAAGCATGAG 59.500 37.037 25.69 17.73 37.24 2.90
182 183 7.345691 TCTTTAGTATTTGGATCCAAGCATGA 58.654 34.615 25.69 12.50 37.24 3.07
183 184 7.500227 TCTCTTTAGTATTTGGATCCAAGCATG 59.500 37.037 25.69 12.43 37.24 4.06
184 185 7.500559 GTCTCTTTAGTATTTGGATCCAAGCAT 59.499 37.037 25.69 19.69 37.24 3.79
185 186 6.823689 GTCTCTTTAGTATTTGGATCCAAGCA 59.176 38.462 25.69 14.00 37.24 3.91
186 187 7.051000 AGTCTCTTTAGTATTTGGATCCAAGC 58.949 38.462 25.69 19.18 37.24 4.01
203 204 8.951243 GCTCATTACCTTGATTTTAGTCTCTTT 58.049 33.333 0.00 0.00 0.00 2.52
204 205 8.103305 TGCTCATTACCTTGATTTTAGTCTCTT 58.897 33.333 0.00 0.00 0.00 2.85
205 206 7.624549 TGCTCATTACCTTGATTTTAGTCTCT 58.375 34.615 0.00 0.00 0.00 3.10
206 207 7.849804 TGCTCATTACCTTGATTTTAGTCTC 57.150 36.000 0.00 0.00 0.00 3.36
207 208 8.814038 AATGCTCATTACCTTGATTTTAGTCT 57.186 30.769 0.00 0.00 0.00 3.24
216 217 9.866655 AAGGATAATAAATGCTCATTACCTTGA 57.133 29.630 0.00 0.00 32.72 3.02
218 219 9.866655 TGAAGGATAATAAATGCTCATTACCTT 57.133 29.630 0.00 0.00 34.47 3.50
219 220 9.866655 TTGAAGGATAATAAATGCTCATTACCT 57.133 29.630 0.00 0.00 0.00 3.08
223 224 8.424133 GGGTTTGAAGGATAATAAATGCTCATT 58.576 33.333 0.00 0.00 0.00 2.57
224 225 7.786464 AGGGTTTGAAGGATAATAAATGCTCAT 59.214 33.333 0.00 0.00 0.00 2.90
225 226 7.125391 AGGGTTTGAAGGATAATAAATGCTCA 58.875 34.615 0.00 0.00 0.00 4.26
226 227 7.255625 GGAGGGTTTGAAGGATAATAAATGCTC 60.256 40.741 0.00 0.00 0.00 4.26
227 228 6.551227 GGAGGGTTTGAAGGATAATAAATGCT 59.449 38.462 0.00 0.00 0.00 3.79
228 229 6.323739 TGGAGGGTTTGAAGGATAATAAATGC 59.676 38.462 0.00 0.00 0.00 3.56
229 230 7.896383 TGGAGGGTTTGAAGGATAATAAATG 57.104 36.000 0.00 0.00 0.00 2.32
231 232 9.416284 GTATTGGAGGGTTTGAAGGATAATAAA 57.584 33.333 0.00 0.00 0.00 1.40
232 233 8.561769 TGTATTGGAGGGTTTGAAGGATAATAA 58.438 33.333 0.00 0.00 0.00 1.40
233 234 8.108378 TGTATTGGAGGGTTTGAAGGATAATA 57.892 34.615 0.00 0.00 0.00 0.98
234 235 6.980577 TGTATTGGAGGGTTTGAAGGATAAT 58.019 36.000 0.00 0.00 0.00 1.28
235 236 6.216662 TCTGTATTGGAGGGTTTGAAGGATAA 59.783 38.462 0.00 0.00 0.00 1.75
236 237 5.729229 TCTGTATTGGAGGGTTTGAAGGATA 59.271 40.000 0.00 0.00 0.00 2.59
237 238 4.540099 TCTGTATTGGAGGGTTTGAAGGAT 59.460 41.667 0.00 0.00 0.00 3.24
238 239 3.913799 TCTGTATTGGAGGGTTTGAAGGA 59.086 43.478 0.00 0.00 0.00 3.36
239 240 4.301072 TCTGTATTGGAGGGTTTGAAGG 57.699 45.455 0.00 0.00 0.00 3.46
240 241 5.316987 AGTTCTGTATTGGAGGGTTTGAAG 58.683 41.667 0.00 0.00 0.00 3.02
241 242 5.313712 GAGTTCTGTATTGGAGGGTTTGAA 58.686 41.667 0.00 0.00 0.00 2.69
242 243 4.562757 CGAGTTCTGTATTGGAGGGTTTGA 60.563 45.833 0.00 0.00 0.00 2.69
243 244 3.684788 CGAGTTCTGTATTGGAGGGTTTG 59.315 47.826 0.00 0.00 0.00 2.93
244 245 3.326880 ACGAGTTCTGTATTGGAGGGTTT 59.673 43.478 0.00 0.00 0.00 3.27
245 246 2.904434 ACGAGTTCTGTATTGGAGGGTT 59.096 45.455 0.00 0.00 0.00 4.11
246 247 2.496470 GACGAGTTCTGTATTGGAGGGT 59.504 50.000 0.00 0.00 0.00 4.34
247 248 2.761208 AGACGAGTTCTGTATTGGAGGG 59.239 50.000 0.00 0.00 31.12 4.30
248 249 3.775202 CAGACGAGTTCTGTATTGGAGG 58.225 50.000 0.00 0.00 46.12 4.30
258 259 2.294791 CTCTCCAACACAGACGAGTTCT 59.705 50.000 0.00 0.00 33.33 3.01
259 260 2.608261 CCTCTCCAACACAGACGAGTTC 60.608 54.545 0.00 0.00 0.00 3.01
260 261 1.341531 CCTCTCCAACACAGACGAGTT 59.658 52.381 0.00 0.00 0.00 3.01
261 262 0.962489 CCTCTCCAACACAGACGAGT 59.038 55.000 0.00 0.00 0.00 4.18
262 263 1.201181 CTCCTCTCCAACACAGACGAG 59.799 57.143 0.00 0.00 0.00 4.18
263 264 1.248486 CTCCTCTCCAACACAGACGA 58.752 55.000 0.00 0.00 0.00 4.20
264 265 0.962489 ACTCCTCTCCAACACAGACG 59.038 55.000 0.00 0.00 0.00 4.18
265 266 4.602340 TTAACTCCTCTCCAACACAGAC 57.398 45.455 0.00 0.00 0.00 3.51
266 267 5.306937 TCATTTAACTCCTCTCCAACACAGA 59.693 40.000 0.00 0.00 0.00 3.41
267 268 5.551233 TCATTTAACTCCTCTCCAACACAG 58.449 41.667 0.00 0.00 0.00 3.66
268 269 5.513094 CCTCATTTAACTCCTCTCCAACACA 60.513 44.000 0.00 0.00 0.00 3.72
269 270 4.938226 CCTCATTTAACTCCTCTCCAACAC 59.062 45.833 0.00 0.00 0.00 3.32
270 271 4.844085 TCCTCATTTAACTCCTCTCCAACA 59.156 41.667 0.00 0.00 0.00 3.33
271 272 5.187967 TCTCCTCATTTAACTCCTCTCCAAC 59.812 44.000 0.00 0.00 0.00 3.77
272 273 5.342017 TCTCCTCATTTAACTCCTCTCCAA 58.658 41.667 0.00 0.00 0.00 3.53
273 274 4.947883 TCTCCTCATTTAACTCCTCTCCA 58.052 43.478 0.00 0.00 0.00 3.86
274 275 5.205056 TCTCTCCTCATTTAACTCCTCTCC 58.795 45.833 0.00 0.00 0.00 3.71
275 276 6.783708 TTCTCTCCTCATTTAACTCCTCTC 57.216 41.667 0.00 0.00 0.00 3.20
276 277 6.156083 CCTTTCTCTCCTCATTTAACTCCTCT 59.844 42.308 0.00 0.00 0.00 3.69
277 278 6.155393 TCCTTTCTCTCCTCATTTAACTCCTC 59.845 42.308 0.00 0.00 0.00 3.71
278 279 6.026186 TCCTTTCTCTCCTCATTTAACTCCT 58.974 40.000 0.00 0.00 0.00 3.69
279 280 6.070481 AGTCCTTTCTCTCCTCATTTAACTCC 60.070 42.308 0.00 0.00 0.00 3.85
280 281 6.941857 AGTCCTTTCTCTCCTCATTTAACTC 58.058 40.000 0.00 0.00 0.00 3.01
281 282 6.943899 AGTCCTTTCTCTCCTCATTTAACT 57.056 37.500 0.00 0.00 0.00 2.24
282 283 9.320352 GATTAGTCCTTTCTCTCCTCATTTAAC 57.680 37.037 0.00 0.00 0.00 2.01
283 284 8.487028 GGATTAGTCCTTTCTCTCCTCATTTAA 58.513 37.037 0.00 0.00 41.60 1.52
284 285 7.623677 TGGATTAGTCCTTTCTCTCCTCATTTA 59.376 37.037 5.79 0.00 45.32 1.40
285 286 6.445139 TGGATTAGTCCTTTCTCTCCTCATTT 59.555 38.462 5.79 0.00 45.32 2.32
286 287 5.966935 TGGATTAGTCCTTTCTCTCCTCATT 59.033 40.000 5.79 0.00 45.32 2.57
287 288 5.365314 GTGGATTAGTCCTTTCTCTCCTCAT 59.635 44.000 5.79 0.00 45.32 2.90
288 289 4.712337 GTGGATTAGTCCTTTCTCTCCTCA 59.288 45.833 5.79 0.00 45.32 3.86
289 290 4.712337 TGTGGATTAGTCCTTTCTCTCCTC 59.288 45.833 5.79 0.00 45.32 3.71
290 291 4.689062 TGTGGATTAGTCCTTTCTCTCCT 58.311 43.478 5.79 0.00 45.32 3.69
291 292 5.622346 ATGTGGATTAGTCCTTTCTCTCC 57.378 43.478 5.79 0.00 45.32 3.71
292 293 7.929941 AAAATGTGGATTAGTCCTTTCTCTC 57.070 36.000 5.79 0.00 45.32 3.20
293 294 9.981460 ATTAAAATGTGGATTAGTCCTTTCTCT 57.019 29.630 5.79 0.00 45.32 3.10
297 298 9.421399 CCCTATTAAAATGTGGATTAGTCCTTT 57.579 33.333 5.79 0.71 45.32 3.11
298 299 8.004801 CCCCTATTAAAATGTGGATTAGTCCTT 58.995 37.037 5.79 0.00 45.32 3.36
299 300 7.130442 ACCCCTATTAAAATGTGGATTAGTCCT 59.870 37.037 5.79 0.00 45.32 3.85
300 301 7.295340 ACCCCTATTAAAATGTGGATTAGTCC 58.705 38.462 0.00 0.00 45.31 3.85
303 304 9.462606 GGATACCCCTATTAAAATGTGGATTAG 57.537 37.037 0.00 0.00 0.00 1.73
347 348 4.223255 AGGGGCTAAAACTAGTCTTGAGAC 59.777 45.833 0.00 2.93 45.08 3.36
348 349 4.426704 AGGGGCTAAAACTAGTCTTGAGA 58.573 43.478 0.00 0.00 0.00 3.27
349 350 4.468153 AGAGGGGCTAAAACTAGTCTTGAG 59.532 45.833 0.00 0.00 0.00 3.02
350 351 4.426704 AGAGGGGCTAAAACTAGTCTTGA 58.573 43.478 0.00 0.00 0.00 3.02
351 352 4.828072 AGAGGGGCTAAAACTAGTCTTG 57.172 45.455 0.00 0.00 0.00 3.02
352 353 5.844773 AAAGAGGGGCTAAAACTAGTCTT 57.155 39.130 0.00 0.00 0.00 3.01
353 354 6.024247 ACTAAAGAGGGGCTAAAACTAGTCT 58.976 40.000 0.00 0.00 0.00 3.24
354 355 6.070938 TGACTAAAGAGGGGCTAAAACTAGTC 60.071 42.308 0.00 0.00 0.00 2.59
355 356 5.783875 TGACTAAAGAGGGGCTAAAACTAGT 59.216 40.000 0.00 0.00 0.00 2.57
356 357 6.295719 TGACTAAAGAGGGGCTAAAACTAG 57.704 41.667 0.00 0.00 0.00 2.57
357 358 6.296259 CCTTGACTAAAGAGGGGCTAAAACTA 60.296 42.308 0.00 0.00 38.24 2.24
358 359 5.515008 CCTTGACTAAAGAGGGGCTAAAACT 60.515 44.000 0.00 0.00 38.24 2.66
359 360 4.700692 CCTTGACTAAAGAGGGGCTAAAAC 59.299 45.833 0.00 0.00 38.24 2.43
360 361 4.263771 CCCTTGACTAAAGAGGGGCTAAAA 60.264 45.833 0.00 0.00 45.27 1.52
361 362 3.265995 CCCTTGACTAAAGAGGGGCTAAA 59.734 47.826 0.00 0.00 45.27 1.85
362 363 2.844348 CCCTTGACTAAAGAGGGGCTAA 59.156 50.000 0.00 0.00 45.27 3.09
363 364 2.478292 CCCTTGACTAAAGAGGGGCTA 58.522 52.381 0.00 0.00 45.27 3.93
364 365 1.290134 CCCTTGACTAAAGAGGGGCT 58.710 55.000 0.00 0.00 45.27 5.19
365 366 3.884226 CCCTTGACTAAAGAGGGGC 57.116 57.895 0.00 0.00 45.27 5.80
368 369 3.425162 AAGCACCCTTGACTAAAGAGG 57.575 47.619 0.00 0.00 38.24 3.69
378 379 3.588955 GCTAAAATTCCAAGCACCCTTG 58.411 45.455 2.67 0.00 46.38 3.61
379 380 2.567169 GGCTAAAATTCCAAGCACCCTT 59.433 45.455 8.39 0.00 38.01 3.95
380 381 2.179427 GGCTAAAATTCCAAGCACCCT 58.821 47.619 8.39 0.00 38.01 4.34
381 382 2.166459 GAGGCTAAAATTCCAAGCACCC 59.834 50.000 8.39 0.00 38.01 4.61
382 383 3.092301 AGAGGCTAAAATTCCAAGCACC 58.908 45.455 8.39 0.00 38.01 5.01
383 384 4.790765 AAGAGGCTAAAATTCCAAGCAC 57.209 40.909 8.39 3.37 38.01 4.40
384 385 6.719370 TCTTTAAGAGGCTAAAATTCCAAGCA 59.281 34.615 8.39 0.00 38.01 3.91
385 386 7.121315 TCTCTTTAAGAGGCTAAAATTCCAAGC 59.879 37.037 20.29 0.00 42.54 4.01
386 387 8.454894 GTCTCTTTAAGAGGCTAAAATTCCAAG 58.545 37.037 18.21 0.00 43.38 3.61
387 388 8.336801 GTCTCTTTAAGAGGCTAAAATTCCAA 57.663 34.615 18.21 0.00 43.38 3.53
388 389 7.923414 GTCTCTTTAAGAGGCTAAAATTCCA 57.077 36.000 18.21 0.00 43.38 3.53
398 399 9.654663 TGACTAAAAATAGTCTCTTTAAGAGGC 57.345 33.333 17.87 17.87 46.94 4.70
420 421 8.990163 TCCAAAGGACTTATTTTAGTTTGACT 57.010 30.769 0.00 0.00 0.00 3.41
421 422 9.841880 GATCCAAAGGACTTATTTTAGTTTGAC 57.158 33.333 0.00 0.00 32.98 3.18
422 423 9.020731 GGATCCAAAGGACTTATTTTAGTTTGA 57.979 33.333 6.95 0.00 32.98 2.69
423 424 8.802267 TGGATCCAAAGGACTTATTTTAGTTTG 58.198 33.333 13.46 0.00 32.98 2.93
424 425 8.950007 TGGATCCAAAGGACTTATTTTAGTTT 57.050 30.769 13.46 0.00 32.98 2.66
425 426 8.950007 TTGGATCCAAAGGACTTATTTTAGTT 57.050 30.769 25.13 0.00 32.98 2.24
426 427 7.122799 GCTTGGATCCAAAGGACTTATTTTAGT 59.877 37.037 26.87 0.00 32.98 2.24
427 428 7.122650 TGCTTGGATCCAAAGGACTTATTTTAG 59.877 37.037 26.87 11.69 32.98 1.85
428 429 6.951198 TGCTTGGATCCAAAGGACTTATTTTA 59.049 34.615 26.87 0.69 32.98 1.52
429 430 5.779771 TGCTTGGATCCAAAGGACTTATTTT 59.220 36.000 26.87 0.00 32.98 1.82
430 431 5.185828 GTGCTTGGATCCAAAGGACTTATTT 59.814 40.000 26.87 0.00 32.98 1.40
431 432 4.706962 GTGCTTGGATCCAAAGGACTTATT 59.293 41.667 26.87 0.00 32.98 1.40
432 433 4.273318 GTGCTTGGATCCAAAGGACTTAT 58.727 43.478 26.87 0.00 32.98 1.73
433 434 3.561313 GGTGCTTGGATCCAAAGGACTTA 60.561 47.826 29.36 11.62 32.98 2.24
434 435 2.519013 GTGCTTGGATCCAAAGGACTT 58.481 47.619 26.87 0.00 32.98 3.01
435 436 1.272147 GGTGCTTGGATCCAAAGGACT 60.272 52.381 29.36 0.00 32.98 3.85
436 437 1.177401 GGTGCTTGGATCCAAAGGAC 58.823 55.000 26.87 26.39 32.98 3.85
437 438 0.039618 GGGTGCTTGGATCCAAAGGA 59.960 55.000 26.87 18.60 35.33 3.36
438 439 0.040204 AGGGTGCTTGGATCCAAAGG 59.960 55.000 26.87 17.58 35.33 3.11
439 440 1.928868 AAGGGTGCTTGGATCCAAAG 58.071 50.000 26.87 20.47 35.33 2.77
440 441 2.378547 ACTAAGGGTGCTTGGATCCAAA 59.621 45.455 26.87 11.64 35.33 3.28
441 442 1.992557 ACTAAGGGTGCTTGGATCCAA 59.007 47.619 25.53 25.53 0.00 3.53
442 443 1.668826 ACTAAGGGTGCTTGGATCCA 58.331 50.000 11.44 11.44 0.00 3.41
443 444 2.808906 AACTAAGGGTGCTTGGATCC 57.191 50.000 4.20 4.20 0.00 3.36
444 445 4.844884 AGTTAACTAAGGGTGCTTGGATC 58.155 43.478 6.26 0.00 0.00 3.36
445 446 4.929146 AGTTAACTAAGGGTGCTTGGAT 57.071 40.909 6.26 0.00 0.00 3.41
446 447 5.829062 TTAGTTAACTAAGGGTGCTTGGA 57.171 39.130 21.52 0.00 33.83 3.53
457 458 7.170998 GCAGTGCTTCTCAACTTAGTTAACTAA 59.829 37.037 23.31 23.31 36.99 2.24
475 476 2.057137 TTTCTGGAGTTGCAGTGCTT 57.943 45.000 17.60 1.56 0.00 3.91
482 483 1.519408 TAGCCGTTTTCTGGAGTTGC 58.481 50.000 0.00 0.00 0.00 4.17
485 486 1.628846 ACCATAGCCGTTTTCTGGAGT 59.371 47.619 0.00 0.00 0.00 3.85
487 488 2.617021 GGAACCATAGCCGTTTTCTGGA 60.617 50.000 0.00 0.00 0.00 3.86
490 491 3.262405 TGTAGGAACCATAGCCGTTTTCT 59.738 43.478 0.00 0.00 0.00 2.52
543 557 1.432270 GCTGCTATGGAAGGCGACAC 61.432 60.000 0.00 0.00 0.00 3.67
549 563 1.137086 ACGTACTGCTGCTATGGAAGG 59.863 52.381 0.00 0.00 0.00 3.46
555 569 3.383505 TGGATTACACGTACTGCTGCTAT 59.616 43.478 0.00 0.00 0.00 2.97
572 586 3.054434 TGGACTGGATTTCGTGATGGATT 60.054 43.478 0.00 0.00 0.00 3.01
633 647 2.696125 ATGTACCCAGGGGCCAGG 60.696 66.667 11.37 6.57 39.32 4.45
634 648 2.597340 CATGTACCCAGGGGCCAG 59.403 66.667 11.37 0.00 39.32 4.85
635 649 3.738481 GCATGTACCCAGGGGCCA 61.738 66.667 11.37 6.08 39.32 5.36
636 650 3.073599 ATGCATGTACCCAGGGGCC 62.074 63.158 11.37 0.00 39.32 5.80
637 651 1.829533 CATGCATGTACCCAGGGGC 60.830 63.158 18.91 3.23 39.32 5.80
692 706 2.196749 GGACATCGATATATGCGGCAG 58.803 52.381 9.25 0.00 0.00 4.85
699 713 9.796180 GTCTACTTATAGGGGACATCGATATAT 57.204 37.037 0.00 0.00 0.00 0.86
709 723 5.337652 GCATGGATGTCTACTTATAGGGGAC 60.338 48.000 0.00 4.20 0.00 4.46
723 737 4.505191 GCATAAACACATTGCATGGATGTC 59.495 41.667 0.00 0.00 35.64 3.06
724 738 4.081586 TGCATAAACACATTGCATGGATGT 60.082 37.500 0.00 0.00 41.18 3.06
749 769 3.181449 TGAGCTTGGTTGGTAACTTGCTA 60.181 43.478 0.00 0.00 33.86 3.49
751 771 1.953686 TGAGCTTGGTTGGTAACTTGC 59.046 47.619 0.00 0.00 37.61 4.01
898 922 8.757982 ACTGAAACTAATTCATCCATAGCAAT 57.242 30.769 0.00 0.00 46.62 3.56
939 963 4.650754 AGAAACACGTCAGTCTTACAGT 57.349 40.909 0.00 0.00 0.00 3.55
942 966 4.796369 AGCTAGAAACACGTCAGTCTTAC 58.204 43.478 0.00 0.00 0.00 2.34
953 977 8.593492 ATCAATTTTCCAAAAGCTAGAAACAC 57.407 30.769 0.00 0.00 0.00 3.32
961 985 6.427853 GCCTACAAATCAATTTTCCAAAAGCT 59.572 34.615 0.00 0.00 0.00 3.74
1050 1074 4.672251 GGCCATGACTTCTGCCAT 57.328 55.556 0.00 0.00 43.46 4.40
1214 1238 1.445942 CCAGTGAAGGGTGTGTCGT 59.554 57.895 0.00 0.00 0.00 4.34
1377 1401 8.431593 CGATTCTCTCACAAAACAAAACAAAAA 58.568 29.630 0.00 0.00 0.00 1.94
1378 1402 7.596995 ACGATTCTCTCACAAAACAAAACAAAA 59.403 29.630 0.00 0.00 0.00 2.44
1379 1403 7.087639 ACGATTCTCTCACAAAACAAAACAAA 58.912 30.769 0.00 0.00 0.00 2.83
1380 1404 6.616947 ACGATTCTCTCACAAAACAAAACAA 58.383 32.000 0.00 0.00 0.00 2.83
1381 1405 6.189677 ACGATTCTCTCACAAAACAAAACA 57.810 33.333 0.00 0.00 0.00 2.83
1382 1406 7.272515 TGAAACGATTCTCTCACAAAACAAAAC 59.727 33.333 6.98 0.00 36.48 2.43
1383 1407 7.309177 TGAAACGATTCTCTCACAAAACAAAA 58.691 30.769 6.98 0.00 36.48 2.44
1384 1408 6.847400 TGAAACGATTCTCTCACAAAACAAA 58.153 32.000 6.98 0.00 36.48 2.83
1387 1411 6.892691 AGATGAAACGATTCTCTCACAAAAC 58.107 36.000 6.98 0.00 36.48 2.43
1393 1417 8.687242 ACATAAGTAGATGAAACGATTCTCTCA 58.313 33.333 6.98 0.00 36.48 3.27
1642 1667 3.703001 ATTTGGAACTGACCGTCATCT 57.297 42.857 0.62 0.00 0.00 2.90
1649 1674 5.902613 TGATGATGAATTTGGAACTGACC 57.097 39.130 0.00 0.00 0.00 4.02
1664 1689 6.876257 ACTCACTGATGATGATGATGATGATG 59.124 38.462 0.00 0.00 33.22 3.07
1665 1690 7.010339 ACTCACTGATGATGATGATGATGAT 57.990 36.000 0.00 0.00 33.22 2.45
1818 1859 5.291128 CGATGTTTTATCACCAGGTGACTAC 59.709 44.000 25.35 18.45 45.65 2.73
2069 2113 1.738099 GGCGAGACAAGCACGTGAT 60.738 57.895 22.23 11.27 36.08 3.06
2070 2114 2.355837 GGCGAGACAAGCACGTGA 60.356 61.111 22.23 0.00 36.08 4.35
2074 2118 0.037790 AGAAGAGGCGAGACAAGCAC 60.038 55.000 0.00 0.00 36.08 4.40
2111 2155 6.645700 TCTTCAAATTGTGTGTTTTCTTGC 57.354 33.333 0.00 0.00 0.00 4.01
2137 2181 0.030638 CTTCAACTTGCCACCAACGG 59.969 55.000 0.00 0.00 0.00 4.44
2138 2182 1.021202 TCTTCAACTTGCCACCAACG 58.979 50.000 0.00 0.00 0.00 4.10
2153 2197 2.869192 GTCTTTGAGCGGATCCATCTTC 59.131 50.000 13.41 3.82 0.00 2.87
2159 2203 2.100605 ACTTGTCTTTGAGCGGATCC 57.899 50.000 0.00 0.00 0.00 3.36
2177 2221 9.712359 GGACAATTCGGACTATTACAAATAAAC 57.288 33.333 0.00 0.00 0.00 2.01
2189 2233 7.383687 GGATGTATATTGGACAATTCGGACTA 58.616 38.462 2.53 0.00 32.50 2.59
2190 2234 6.231211 GGATGTATATTGGACAATTCGGACT 58.769 40.000 2.53 0.00 32.50 3.85
2191 2235 5.411669 GGGATGTATATTGGACAATTCGGAC 59.588 44.000 2.53 0.00 32.50 4.79
2192 2236 5.309543 AGGGATGTATATTGGACAATTCGGA 59.690 40.000 2.53 0.00 32.50 4.55
2193 2237 5.412594 CAGGGATGTATATTGGACAATTCGG 59.587 44.000 2.53 0.00 32.50 4.30
2195 2239 7.308830 GCTTCAGGGATGTATATTGGACAATTC 60.309 40.741 2.53 0.00 32.50 2.17
2196 2240 6.491403 GCTTCAGGGATGTATATTGGACAATT 59.509 38.462 2.53 0.00 32.50 2.32
2197 2241 6.006449 GCTTCAGGGATGTATATTGGACAAT 58.994 40.000 2.80 2.80 34.93 2.71
2198 2242 5.376625 GCTTCAGGGATGTATATTGGACAA 58.623 41.667 0.00 0.00 0.00 3.18
2199 2243 4.202461 GGCTTCAGGGATGTATATTGGACA 60.202 45.833 0.00 0.00 0.00 4.02
2200 2244 4.327680 GGCTTCAGGGATGTATATTGGAC 58.672 47.826 0.00 0.00 0.00 4.02
2201 2245 3.330701 GGGCTTCAGGGATGTATATTGGA 59.669 47.826 0.00 0.00 0.00 3.53
2202 2246 3.562176 GGGGCTTCAGGGATGTATATTGG 60.562 52.174 0.00 0.00 0.00 3.16
2203 2247 3.074390 TGGGGCTTCAGGGATGTATATTG 59.926 47.826 0.00 0.00 0.00 1.90
2204 2248 3.074538 GTGGGGCTTCAGGGATGTATATT 59.925 47.826 0.00 0.00 0.00 1.28
2205 2249 2.644798 GTGGGGCTTCAGGGATGTATAT 59.355 50.000 0.00 0.00 0.00 0.86
2206 2250 2.054799 GTGGGGCTTCAGGGATGTATA 58.945 52.381 0.00 0.00 0.00 1.47
2207 2251 0.846693 GTGGGGCTTCAGGGATGTAT 59.153 55.000 0.00 0.00 0.00 2.29
2208 2252 1.279025 GGTGGGGCTTCAGGGATGTA 61.279 60.000 0.00 0.00 0.00 2.29
2209 2253 2.616458 GGTGGGGCTTCAGGGATGT 61.616 63.158 0.00 0.00 0.00 3.06
2210 2254 2.276740 GGTGGGGCTTCAGGGATG 59.723 66.667 0.00 0.00 0.00 3.51
2211 2255 3.023735 GGGTGGGGCTTCAGGGAT 61.024 66.667 0.00 0.00 0.00 3.85
2212 2256 3.981464 TATTGGGTGGGGCTTCAGGGA 62.981 57.143 0.00 0.00 0.00 4.20
2213 2257 1.580066 TATTGGGTGGGGCTTCAGGG 61.580 60.000 0.00 0.00 0.00 4.45
2214 2258 0.557729 ATATTGGGTGGGGCTTCAGG 59.442 55.000 0.00 0.00 0.00 3.86
2215 2259 3.690460 GATATATTGGGTGGGGCTTCAG 58.310 50.000 0.00 0.00 0.00 3.02
2216 2260 3.806949 GATATATTGGGTGGGGCTTCA 57.193 47.619 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.