Multiple sequence alignment - TraesCS1D01G027300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G027300 chr1D 100.000 2517 0 0 1 2517 10954760 10957276 0.000000e+00 4649.0
1 TraesCS1D01G027300 chr1A 88.906 658 55 7 1014 1663 22660187 22659540 0.000000e+00 795.0
2 TraesCS1D01G027300 chr1A 88.968 281 20 7 761 1032 22661336 22661058 1.120000e-88 337.0
3 TraesCS1D01G027300 chr1A 84.164 341 36 8 270 606 22661689 22661363 5.230000e-82 315.0
4 TraesCS1D01G027300 chr1A 91.667 120 8 2 639 757 361354248 361354366 5.570000e-37 165.0
5 TraesCS1D01G027300 chr1A 90.678 118 11 0 640 757 498452668 498452785 9.320000e-35 158.0
6 TraesCS1D01G027300 chr1A 86.923 130 15 2 630 758 208212523 208212651 7.260000e-31 145.0
7 TraesCS1D01G027300 chr1A 85.542 83 12 0 289 371 22632057 22631975 1.240000e-13 87.9
8 TraesCS1D01G027300 chr1B 88.280 657 65 10 1014 1663 16462413 16463064 0.000000e+00 776.0
9 TraesCS1D01G027300 chr1B 83.502 691 76 19 1808 2475 16463118 16463793 5.950000e-171 610.0
10 TraesCS1D01G027300 chr1B 85.586 333 37 6 278 606 16457037 16457362 3.100000e-89 339.0
11 TraesCS1D01G027300 chr1B 86.154 260 29 4 762 1014 16457390 16457649 8.870000e-70 274.0
12 TraesCS1D01G027300 chr1B 87.059 85 11 0 287 371 16480440 16480524 2.060000e-16 97.1
13 TraesCS1D01G027300 chr1B 87.059 85 11 0 287 371 16652413 16652497 2.060000e-16 97.1
14 TraesCS1D01G027300 chr1B 84.416 77 12 0 2 78 16455227 16455303 2.680000e-10 76.8
15 TraesCS1D01G027300 chr2D 89.683 126 13 0 640 765 599946230 599946105 7.210000e-36 161.0
16 TraesCS1D01G027300 chr2D 90.000 120 12 0 640 759 109700466 109700347 3.350000e-34 156.0
17 TraesCS1D01G027300 chr4D 89.062 128 13 1 635 762 55352437 55352563 9.320000e-35 158.0
18 TraesCS1D01G027300 chr4D 82.114 123 18 4 134 252 399607730 399607608 4.430000e-18 102.0
19 TraesCS1D01G027300 chr3A 90.678 118 11 0 640 757 720229503 720229620 9.320000e-35 158.0
20 TraesCS1D01G027300 chr2A 90.678 118 11 0 640 757 729162120 729162003 9.320000e-35 158.0
21 TraesCS1D01G027300 chr2A 83.099 142 23 1 624 764 148855084 148854943 7.310000e-26 128.0
22 TraesCS1D01G027300 chr2A 85.366 123 16 2 630 751 705820540 705820419 2.630000e-25 126.0
23 TraesCS1D01G027300 chr2B 90.000 120 12 0 638 757 657072112 657072231 3.350000e-34 156.0
24 TraesCS1D01G027300 chr6D 87.313 134 13 4 640 770 178852318 178852186 1.560000e-32 150.0
25 TraesCS1D01G027300 chr5D 88.298 94 11 0 278 371 388044060 388043967 2.050000e-21 113.0
26 TraesCS1D01G027300 chr5D 87.234 94 12 0 278 371 387989571 387989478 9.520000e-20 108.0
27 TraesCS1D01G027300 chr5A 89.412 85 9 0 287 371 491162998 491162914 9.520000e-20 108.0
28 TraesCS1D01G027300 chr5A 87.234 94 12 0 278 371 491215204 491215111 9.520000e-20 108.0
29 TraesCS1D01G027300 chr5B 84.615 104 16 0 268 371 466616447 466616344 1.230000e-18 104.0
30 TraesCS1D01G027300 chr4A 86.842 76 8 2 193 267 721933439 721933365 1.600000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G027300 chr1D 10954760 10957276 2516 False 4649.000000 4649 100.000000 1 2517 1 chr1D.!!$F1 2516
1 TraesCS1D01G027300 chr1A 22659540 22661689 2149 True 482.333333 795 87.346000 270 1663 3 chr1A.!!$R2 1393
2 TraesCS1D01G027300 chr1B 16462413 16463793 1380 False 693.000000 776 85.891000 1014 2475 2 chr1B.!!$F4 1461
3 TraesCS1D01G027300 chr1B 16455227 16457649 2422 False 229.933333 339 85.385333 2 1014 3 chr1B.!!$F3 1012

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
377 2056 0.110056 GCCACGATGTCTTTGTGCTG 60.11 55.0 0.0 0.0 38.27 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1872 4460 0.033366 AAACAAAAGCGGACATGGGC 59.967 50.0 0.0 0.0 0.0 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 1.520600 GGGCCCGGGCGTTTATATTG 61.521 60.000 38.22 0.00 43.06 1.90
26 27 0.535553 GGCCCGGGCGTTTATATTGA 60.536 55.000 38.22 0.00 43.06 2.57
39 40 5.478001 GTTTATATTGACACGCACTACACG 58.522 41.667 0.00 0.00 0.00 4.49
73 74 3.217231 CGGAATCCGGTAGCAGGT 58.783 61.111 14.91 0.00 44.15 4.00
85 1764 2.303175 GTAGCAGGTCGGAATCTCTCT 58.697 52.381 0.00 0.00 0.00 3.10
95 1774 4.870426 GTCGGAATCTCTCTTTGCACATAA 59.130 41.667 0.00 0.00 0.00 1.90
106 1785 2.719531 TGCACATAATCGGGCCTTAA 57.280 45.000 0.84 0.00 0.00 1.85
111 1790 2.105993 ACATAATCGGGCCTTAAGTCCC 59.894 50.000 11.81 11.81 39.17 4.46
120 1799 1.576577 CCTTAAGTCCCGGGTTACCT 58.423 55.000 22.86 9.64 33.28 3.08
122 1801 2.432146 CCTTAAGTCCCGGGTTACCTAC 59.568 54.545 22.86 10.36 33.28 3.18
123 1802 3.369175 CTTAAGTCCCGGGTTACCTACT 58.631 50.000 22.86 12.87 33.28 2.57
124 1803 1.565067 AAGTCCCGGGTTACCTACTG 58.435 55.000 22.86 0.00 33.28 2.74
125 1804 0.411058 AGTCCCGGGTTACCTACTGT 59.589 55.000 22.86 0.00 33.28 3.55
126 1805 0.533951 GTCCCGGGTTACCTACTGTG 59.466 60.000 22.86 0.00 33.28 3.66
128 1807 1.357420 TCCCGGGTTACCTACTGTGTA 59.643 52.381 22.86 0.00 33.28 2.90
129 1808 2.024080 TCCCGGGTTACCTACTGTGTAT 60.024 50.000 22.86 0.00 33.28 2.29
130 1809 2.767960 CCCGGGTTACCTACTGTGTATT 59.232 50.000 14.18 0.00 33.28 1.89
131 1810 3.960102 CCCGGGTTACCTACTGTGTATTA 59.040 47.826 14.18 0.00 33.28 0.98
132 1811 4.038402 CCCGGGTTACCTACTGTGTATTAG 59.962 50.000 14.18 0.00 33.28 1.73
133 1812 4.889409 CCGGGTTACCTACTGTGTATTAGA 59.111 45.833 0.00 0.00 33.28 2.10
134 1813 5.009410 CCGGGTTACCTACTGTGTATTAGAG 59.991 48.000 0.00 0.00 33.28 2.43
135 1814 5.824624 CGGGTTACCTACTGTGTATTAGAGA 59.175 44.000 0.00 0.00 33.28 3.10
136 1815 6.489361 CGGGTTACCTACTGTGTATTAGAGAT 59.511 42.308 0.00 0.00 33.28 2.75
137 1816 7.014038 CGGGTTACCTACTGTGTATTAGAGATT 59.986 40.741 0.00 0.00 33.28 2.40
138 1817 8.702819 GGGTTACCTACTGTGTATTAGAGATTT 58.297 37.037 0.00 0.00 0.00 2.17
139 1818 9.530633 GGTTACCTACTGTGTATTAGAGATTTG 57.469 37.037 0.00 0.00 0.00 2.32
147 1826 9.871238 ACTGTGTATTAGAGATTTGTAATTCGT 57.129 29.630 0.00 0.00 0.00 3.85
151 1830 9.745880 TGTATTAGAGATTTGTAATTCGTCTCC 57.254 33.333 0.00 0.00 36.78 3.71
152 1831 9.968870 GTATTAGAGATTTGTAATTCGTCTCCT 57.031 33.333 0.00 0.00 36.78 3.69
156 1835 8.472007 AGAGATTTGTAATTCGTCTCCTATCT 57.528 34.615 0.00 0.00 36.78 1.98
157 1836 8.919145 AGAGATTTGTAATTCGTCTCCTATCTT 58.081 33.333 0.00 0.00 36.78 2.40
167 1846 9.589461 AATTCGTCTCCTATCTTATCTTTAGGA 57.411 33.333 0.00 0.00 39.30 2.94
173 1852 7.109901 TCCTATCTTATCTTTAGGAGAGGCT 57.890 40.000 0.00 0.00 40.78 4.58
174 1853 7.540183 TCCTATCTTATCTTTAGGAGAGGCTT 58.460 38.462 0.00 0.00 40.78 4.35
175 1854 7.672239 TCCTATCTTATCTTTAGGAGAGGCTTC 59.328 40.741 0.00 0.00 40.78 3.86
176 1855 7.673926 CCTATCTTATCTTTAGGAGAGGCTTCT 59.326 40.741 0.00 0.00 36.49 2.85
177 1856 7.929348 ATCTTATCTTTAGGAGAGGCTTCTT 57.071 36.000 0.00 0.00 37.93 2.52
178 1857 7.118496 TCTTATCTTTAGGAGAGGCTTCTTG 57.882 40.000 0.00 0.00 37.93 3.02
179 1858 6.670027 TCTTATCTTTAGGAGAGGCTTCTTGT 59.330 38.462 0.00 0.00 37.93 3.16
180 1859 4.810191 TCTTTAGGAGAGGCTTCTTGTC 57.190 45.455 0.00 0.00 32.53 3.18
181 1860 3.515901 TCTTTAGGAGAGGCTTCTTGTCC 59.484 47.826 0.00 0.00 32.53 4.02
182 1861 2.930109 TAGGAGAGGCTTCTTGTCCT 57.070 50.000 9.63 9.63 37.73 3.85
183 1862 2.037385 AGGAGAGGCTTCTTGTCCTT 57.963 50.000 0.00 0.00 33.11 3.36
184 1863 1.905894 AGGAGAGGCTTCTTGTCCTTC 59.094 52.381 0.00 0.00 33.11 3.46
185 1864 1.625818 GGAGAGGCTTCTTGTCCTTCA 59.374 52.381 0.00 0.00 32.53 3.02
186 1865 2.238395 GGAGAGGCTTCTTGTCCTTCAT 59.762 50.000 0.00 0.00 32.53 2.57
187 1866 3.269178 GAGAGGCTTCTTGTCCTTCATG 58.731 50.000 0.00 0.00 32.53 3.07
188 1867 2.641815 AGAGGCTTCTTGTCCTTCATGT 59.358 45.455 0.00 0.00 31.71 3.21
189 1868 3.006247 GAGGCTTCTTGTCCTTCATGTC 58.994 50.000 0.00 0.00 31.71 3.06
190 1869 2.641815 AGGCTTCTTGTCCTTCATGTCT 59.358 45.455 0.00 0.00 0.00 3.41
191 1870 3.006247 GGCTTCTTGTCCTTCATGTCTC 58.994 50.000 0.00 0.00 0.00 3.36
192 1871 3.307339 GGCTTCTTGTCCTTCATGTCTCT 60.307 47.826 0.00 0.00 0.00 3.10
193 1872 4.081420 GGCTTCTTGTCCTTCATGTCTCTA 60.081 45.833 0.00 0.00 0.00 2.43
194 1873 4.867608 GCTTCTTGTCCTTCATGTCTCTAC 59.132 45.833 0.00 0.00 0.00 2.59
195 1874 5.337169 GCTTCTTGTCCTTCATGTCTCTACT 60.337 44.000 0.00 0.00 0.00 2.57
196 1875 5.906113 TCTTGTCCTTCATGTCTCTACTC 57.094 43.478 0.00 0.00 0.00 2.59
197 1876 4.707448 TCTTGTCCTTCATGTCTCTACTCC 59.293 45.833 0.00 0.00 0.00 3.85
198 1877 4.323569 TGTCCTTCATGTCTCTACTCCT 57.676 45.455 0.00 0.00 0.00 3.69
199 1878 5.452341 TGTCCTTCATGTCTCTACTCCTA 57.548 43.478 0.00 0.00 0.00 2.94
200 1879 5.827756 TGTCCTTCATGTCTCTACTCCTAA 58.172 41.667 0.00 0.00 0.00 2.69
201 1880 6.253758 TGTCCTTCATGTCTCTACTCCTAAA 58.746 40.000 0.00 0.00 0.00 1.85
202 1881 6.897966 TGTCCTTCATGTCTCTACTCCTAAAT 59.102 38.462 0.00 0.00 0.00 1.40
203 1882 8.059461 TGTCCTTCATGTCTCTACTCCTAAATA 58.941 37.037 0.00 0.00 0.00 1.40
204 1883 9.084533 GTCCTTCATGTCTCTACTCCTAAATAT 57.915 37.037 0.00 0.00 0.00 1.28
208 1887 8.582657 TCATGTCTCTACTCCTAAATATAGCC 57.417 38.462 0.00 0.00 0.00 3.93
209 1888 7.616150 TCATGTCTCTACTCCTAAATATAGCCC 59.384 40.741 0.00 0.00 0.00 5.19
210 1889 5.944599 TGTCTCTACTCCTAAATATAGCCCG 59.055 44.000 0.00 0.00 0.00 6.13
211 1890 5.945191 GTCTCTACTCCTAAATATAGCCCGT 59.055 44.000 0.00 0.00 0.00 5.28
212 1891 5.944599 TCTCTACTCCTAAATATAGCCCGTG 59.055 44.000 0.00 0.00 0.00 4.94
213 1892 5.884322 TCTACTCCTAAATATAGCCCGTGA 58.116 41.667 0.00 0.00 0.00 4.35
214 1893 5.944599 TCTACTCCTAAATATAGCCCGTGAG 59.055 44.000 0.00 0.00 0.00 3.51
229 1908 3.999229 CGTGAGGCTCAATACAACTTC 57.001 47.619 20.62 2.15 0.00 3.01
230 1909 2.673368 CGTGAGGCTCAATACAACTTCC 59.327 50.000 20.62 1.36 0.00 3.46
231 1910 3.674997 GTGAGGCTCAATACAACTTCCA 58.325 45.455 20.62 0.00 0.00 3.53
232 1911 4.072131 GTGAGGCTCAATACAACTTCCAA 58.928 43.478 20.62 0.00 0.00 3.53
233 1912 4.072131 TGAGGCTCAATACAACTTCCAAC 58.928 43.478 16.28 0.00 0.00 3.77
234 1913 3.074412 AGGCTCAATACAACTTCCAACG 58.926 45.455 0.00 0.00 0.00 4.10
235 1914 3.071479 GGCTCAATACAACTTCCAACGA 58.929 45.455 0.00 0.00 0.00 3.85
236 1915 3.689649 GGCTCAATACAACTTCCAACGAT 59.310 43.478 0.00 0.00 0.00 3.73
237 1916 4.156008 GGCTCAATACAACTTCCAACGATT 59.844 41.667 0.00 0.00 0.00 3.34
238 1917 5.324697 GCTCAATACAACTTCCAACGATTC 58.675 41.667 0.00 0.00 0.00 2.52
239 1918 5.673818 GCTCAATACAACTTCCAACGATTCC 60.674 44.000 0.00 0.00 0.00 3.01
240 1919 5.309638 TCAATACAACTTCCAACGATTCCA 58.690 37.500 0.00 0.00 0.00 3.53
241 1920 5.943416 TCAATACAACTTCCAACGATTCCAT 59.057 36.000 0.00 0.00 0.00 3.41
242 1921 6.093495 TCAATACAACTTCCAACGATTCCATC 59.907 38.462 0.00 0.00 0.00 3.51
243 1922 3.750371 ACAACTTCCAACGATTCCATCA 58.250 40.909 0.00 0.00 0.00 3.07
244 1923 4.141287 ACAACTTCCAACGATTCCATCAA 58.859 39.130 0.00 0.00 0.00 2.57
245 1924 4.766891 ACAACTTCCAACGATTCCATCAAT 59.233 37.500 0.00 0.00 0.00 2.57
246 1925 5.106157 ACAACTTCCAACGATTCCATCAATC 60.106 40.000 0.00 0.00 38.06 2.67
247 1926 3.947834 ACTTCCAACGATTCCATCAATCC 59.052 43.478 0.00 0.00 38.17 3.01
248 1927 2.930950 TCCAACGATTCCATCAATCCC 58.069 47.619 0.00 0.00 38.17 3.85
249 1928 2.509548 TCCAACGATTCCATCAATCCCT 59.490 45.455 0.00 0.00 38.17 4.20
250 1929 2.880890 CCAACGATTCCATCAATCCCTC 59.119 50.000 0.00 0.00 38.17 4.30
251 1930 3.434167 CCAACGATTCCATCAATCCCTCT 60.434 47.826 0.00 0.00 38.17 3.69
252 1931 3.760580 ACGATTCCATCAATCCCTCTC 57.239 47.619 0.00 0.00 38.17 3.20
253 1932 3.312890 ACGATTCCATCAATCCCTCTCT 58.687 45.455 0.00 0.00 38.17 3.10
254 1933 4.483950 ACGATTCCATCAATCCCTCTCTA 58.516 43.478 0.00 0.00 38.17 2.43
255 1934 5.090139 ACGATTCCATCAATCCCTCTCTAT 58.910 41.667 0.00 0.00 38.17 1.98
256 1935 5.186797 ACGATTCCATCAATCCCTCTCTATC 59.813 44.000 0.00 0.00 38.17 2.08
257 1936 5.395103 CGATTCCATCAATCCCTCTCTATCC 60.395 48.000 0.00 0.00 38.17 2.59
258 1937 3.796111 TCCATCAATCCCTCTCTATCCC 58.204 50.000 0.00 0.00 0.00 3.85
259 1938 3.407540 TCCATCAATCCCTCTCTATCCCT 59.592 47.826 0.00 0.00 0.00 4.20
260 1939 4.140350 TCCATCAATCCCTCTCTATCCCTT 60.140 45.833 0.00 0.00 0.00 3.95
261 1940 4.600983 CCATCAATCCCTCTCTATCCCTTT 59.399 45.833 0.00 0.00 0.00 3.11
262 1941 5.074239 CCATCAATCCCTCTCTATCCCTTTT 59.926 44.000 0.00 0.00 0.00 2.27
263 1942 6.273260 CCATCAATCCCTCTCTATCCCTTTTA 59.727 42.308 0.00 0.00 0.00 1.52
264 1943 7.202223 CCATCAATCCCTCTCTATCCCTTTTAA 60.202 40.741 0.00 0.00 0.00 1.52
265 1944 7.138054 TCAATCCCTCTCTATCCCTTTTAAC 57.862 40.000 0.00 0.00 0.00 2.01
266 1945 6.676632 TCAATCCCTCTCTATCCCTTTTAACA 59.323 38.462 0.00 0.00 0.00 2.41
267 1946 6.755542 ATCCCTCTCTATCCCTTTTAACAG 57.244 41.667 0.00 0.00 0.00 3.16
268 1947 5.600749 TCCCTCTCTATCCCTTTTAACAGT 58.399 41.667 0.00 0.00 0.00 3.55
276 1955 2.435069 TCCCTTTTAACAGTGTCGACCA 59.565 45.455 14.12 0.00 0.00 4.02
290 1969 1.729470 CGACCAGGAGGACCTCGATG 61.729 65.000 15.46 15.37 45.94 3.84
292 1971 0.252284 ACCAGGAGGACCTCGATGTT 60.252 55.000 15.46 2.63 45.94 2.71
296 1975 1.519455 GAGGACCTCGATGTTGGCG 60.519 63.158 5.55 0.00 0.00 5.69
336 2015 1.208052 TGATCTTCTTGGCCTTCTCGG 59.792 52.381 3.32 0.00 0.00 4.63
347 2026 2.363795 TTCTCGGCGGACATCCCT 60.364 61.111 7.21 0.00 0.00 4.20
357 2036 0.326238 GGACATCCCTACCACCTCCA 60.326 60.000 0.00 0.00 0.00 3.86
373 2052 0.396435 TCCAGCCACGATGTCTTTGT 59.604 50.000 0.00 0.00 0.00 2.83
377 2056 0.110056 GCCACGATGTCTTTGTGCTG 60.110 55.000 0.00 0.00 38.27 4.41
378 2057 0.110056 CCACGATGTCTTTGTGCTGC 60.110 55.000 0.00 0.00 38.27 5.25
418 2101 2.380410 GCTGTGGTACTTCACGCCG 61.380 63.158 0.00 0.00 40.31 6.46
421 2104 0.598158 TGTGGTACTTCACGCCGTTC 60.598 55.000 0.00 0.00 40.31 3.95
438 2121 2.271800 GTTCGCCTCCACATAACTCAG 58.728 52.381 0.00 0.00 0.00 3.35
440 2123 0.811616 CGCCTCCACATAACTCAGGC 60.812 60.000 0.00 0.00 45.39 4.85
442 2125 1.762957 GCCTCCACATAACTCAGGCTA 59.237 52.381 0.84 0.00 45.40 3.93
446 2129 4.302455 CTCCACATAACTCAGGCTATTCG 58.698 47.826 0.00 0.00 0.00 3.34
449 2132 5.773176 TCCACATAACTCAGGCTATTCGATA 59.227 40.000 0.00 0.00 0.00 2.92
500 2183 6.942005 TGTTAAGCATGATATAATCACTGGGG 59.058 38.462 0.00 0.00 43.01 4.96
501 2184 5.848286 AAGCATGATATAATCACTGGGGA 57.152 39.130 0.00 0.00 43.01 4.81
504 2187 6.613699 AGCATGATATAATCACTGGGGAAAA 58.386 36.000 0.00 0.00 43.01 2.29
599 2282 6.239217 TGTGCAAGAAGGTGATGATATAGT 57.761 37.500 0.00 0.00 0.00 2.12
606 2289 6.191315 AGAAGGTGATGATATAGTATCGGCT 58.809 40.000 0.00 0.00 0.00 5.52
607 2290 6.665680 AGAAGGTGATGATATAGTATCGGCTT 59.334 38.462 0.00 0.00 0.00 4.35
608 2291 7.834681 AGAAGGTGATGATATAGTATCGGCTTA 59.165 37.037 0.00 0.00 0.00 3.09
609 2292 8.540507 AAGGTGATGATATAGTATCGGCTTAT 57.459 34.615 0.00 0.00 0.00 1.73
610 2293 8.540507 AGGTGATGATATAGTATCGGCTTATT 57.459 34.615 0.00 0.00 0.00 1.40
611 2294 8.417106 AGGTGATGATATAGTATCGGCTTATTG 58.583 37.037 0.00 0.00 0.00 1.90
612 2295 8.198109 GGTGATGATATAGTATCGGCTTATTGT 58.802 37.037 0.00 0.00 0.00 2.71
613 2296 9.025020 GTGATGATATAGTATCGGCTTATTGTG 57.975 37.037 0.00 0.00 0.00 3.33
614 2297 8.749354 TGATGATATAGTATCGGCTTATTGTGT 58.251 33.333 0.00 0.00 0.00 3.72
615 2298 8.932945 ATGATATAGTATCGGCTTATTGTGTG 57.067 34.615 0.00 0.00 0.00 3.82
647 2330 4.828072 AAGAACATCTTGGTACTCCCTC 57.172 45.455 0.00 0.00 34.98 4.30
648 2331 3.108376 AGAACATCTTGGTACTCCCTCC 58.892 50.000 0.00 0.00 0.00 4.30
649 2332 1.486211 ACATCTTGGTACTCCCTCCG 58.514 55.000 0.00 0.00 0.00 4.63
650 2333 1.273098 ACATCTTGGTACTCCCTCCGT 60.273 52.381 0.00 0.00 0.00 4.69
651 2334 1.409427 CATCTTGGTACTCCCTCCGTC 59.591 57.143 0.00 0.00 0.00 4.79
652 2335 0.324091 TCTTGGTACTCCCTCCGTCC 60.324 60.000 0.00 0.00 0.00 4.79
653 2336 0.613853 CTTGGTACTCCCTCCGTCCA 60.614 60.000 0.00 0.00 0.00 4.02
654 2337 0.178926 TTGGTACTCCCTCCGTCCAA 60.179 55.000 0.00 0.00 33.42 3.53
655 2338 0.178926 TGGTACTCCCTCCGTCCAAA 60.179 55.000 0.00 0.00 0.00 3.28
656 2339 0.978907 GGTACTCCCTCCGTCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
657 2340 1.348696 GGTACTCCCTCCGTCCAAAAA 59.651 52.381 0.00 0.00 0.00 1.94
678 2361 5.859205 AAAGCATGTCCCAATCTTATTCC 57.141 39.130 0.00 0.00 0.00 3.01
679 2362 4.803329 AGCATGTCCCAATCTTATTCCT 57.197 40.909 0.00 0.00 0.00 3.36
680 2363 4.723309 AGCATGTCCCAATCTTATTCCTC 58.277 43.478 0.00 0.00 0.00 3.71
681 2364 4.166725 AGCATGTCCCAATCTTATTCCTCA 59.833 41.667 0.00 0.00 0.00 3.86
682 2365 4.889409 GCATGTCCCAATCTTATTCCTCAA 59.111 41.667 0.00 0.00 0.00 3.02
683 2366 5.360714 GCATGTCCCAATCTTATTCCTCAAA 59.639 40.000 0.00 0.00 0.00 2.69
684 2367 6.041296 GCATGTCCCAATCTTATTCCTCAAAT 59.959 38.462 0.00 0.00 0.00 2.32
685 2368 7.431249 CATGTCCCAATCTTATTCCTCAAATG 58.569 38.462 0.00 0.00 0.00 2.32
686 2369 5.893255 TGTCCCAATCTTATTCCTCAAATGG 59.107 40.000 0.00 0.00 0.00 3.16
687 2370 6.129179 GTCCCAATCTTATTCCTCAAATGGA 58.871 40.000 0.00 0.00 0.00 3.41
688 2371 6.779539 GTCCCAATCTTATTCCTCAAATGGAT 59.220 38.462 0.00 0.00 35.83 3.41
689 2372 6.779049 TCCCAATCTTATTCCTCAAATGGATG 59.221 38.462 0.00 0.00 35.83 3.51
690 2373 6.552350 CCCAATCTTATTCCTCAAATGGATGT 59.448 38.462 0.00 0.00 35.83 3.06
691 2374 7.725397 CCCAATCTTATTCCTCAAATGGATGTA 59.275 37.037 0.00 0.00 35.83 2.29
692 2375 9.305555 CCAATCTTATTCCTCAAATGGATGTAT 57.694 33.333 0.00 0.00 35.83 2.29
697 2380 9.160496 CTTATTCCTCAAATGGATGTATCTAGC 57.840 37.037 0.00 0.00 35.83 3.42
698 2381 6.499106 TTCCTCAAATGGATGTATCTAGCA 57.501 37.500 0.00 0.00 35.83 3.49
699 2382 5.858381 TCCTCAAATGGATGTATCTAGCAC 58.142 41.667 0.00 0.00 0.00 4.40
700 2383 5.604231 TCCTCAAATGGATGTATCTAGCACT 59.396 40.000 0.00 0.00 0.00 4.40
701 2384 6.782494 TCCTCAAATGGATGTATCTAGCACTA 59.218 38.462 0.00 0.00 0.00 2.74
702 2385 7.290014 TCCTCAAATGGATGTATCTAGCACTAA 59.710 37.037 0.00 0.00 0.00 2.24
703 2386 7.386299 CCTCAAATGGATGTATCTAGCACTAAC 59.614 40.741 0.00 0.00 0.00 2.34
704 2387 8.023021 TCAAATGGATGTATCTAGCACTAACT 57.977 34.615 0.00 0.00 0.00 2.24
705 2388 8.486210 TCAAATGGATGTATCTAGCACTAACTT 58.514 33.333 0.00 0.00 0.00 2.66
706 2389 8.554528 CAAATGGATGTATCTAGCACTAACTTG 58.445 37.037 0.00 0.00 0.00 3.16
707 2390 6.161855 TGGATGTATCTAGCACTAACTTGG 57.838 41.667 0.00 0.00 0.00 3.61
708 2391 5.661312 TGGATGTATCTAGCACTAACTTGGT 59.339 40.000 0.00 0.00 0.00 3.67
709 2392 5.986135 GGATGTATCTAGCACTAACTTGGTG 59.014 44.000 0.97 0.97 37.70 4.17
731 2414 9.981460 TGGTGCTAGATATATCTATTTGAGAGA 57.019 33.333 20.31 0.20 38.60 3.10
743 2426 6.390721 TCTATTTGAGAGACAAGTTTCTCCG 58.609 40.000 15.54 3.04 42.81 4.63
744 2427 3.386768 TTGAGAGACAAGTTTCTCCGG 57.613 47.619 15.54 0.00 42.81 5.14
745 2428 1.618837 TGAGAGACAAGTTTCTCCGGG 59.381 52.381 15.54 0.00 42.81 5.73
746 2429 0.321996 AGAGACAAGTTTCTCCGGGC 59.678 55.000 0.00 0.00 42.81 6.13
747 2430 1.004918 AGACAAGTTTCTCCGGGCG 60.005 57.895 0.00 0.00 0.00 6.13
748 2431 2.032071 ACAAGTTTCTCCGGGCGG 59.968 61.111 0.00 0.00 0.00 6.13
749 2432 2.345991 CAAGTTTCTCCGGGCGGA 59.654 61.111 0.00 0.00 42.90 5.54
757 2440 2.441532 TCCGGGCGGAGGAAGTAG 60.442 66.667 0.00 0.00 39.76 2.57
758 2441 2.758737 CCGGGCGGAGGAAGTAGT 60.759 66.667 0.00 0.00 37.50 2.73
759 2442 2.356780 CCGGGCGGAGGAAGTAGTT 61.357 63.158 0.00 0.00 37.50 2.24
784 2467 9.988350 TTATTAACTAAGTTACGGAGAAGTACG 57.012 33.333 0.00 0.00 0.00 3.67
867 2554 1.141591 CGCCCGTACGTGTTATCCAC 61.142 60.000 15.21 0.00 40.89 4.02
937 2628 2.183300 CTGGGTGCATGCATGTGC 59.817 61.111 25.64 16.62 45.25 4.57
938 2629 3.365291 CTGGGTGCATGCATGTGCC 62.365 63.158 25.64 25.33 44.43 5.01
948 2639 1.140161 GCATGTGCCGATGTGCAAT 59.860 52.632 0.00 0.00 44.11 3.56
989 2681 4.266070 GCTGCATGGCCGCATCTG 62.266 66.667 5.73 0.00 42.06 2.90
990 2682 2.827190 CTGCATGGCCGCATCTGT 60.827 61.111 5.73 0.00 42.06 3.41
991 2683 3.120979 CTGCATGGCCGCATCTGTG 62.121 63.158 5.73 0.00 42.06 3.66
1018 3599 8.834004 ATCTCCCCTATAAATACGCATACTTA 57.166 34.615 0.00 0.00 0.00 2.24
1050 3631 8.621532 TTTATATGCAGATATCAACCAACTCC 57.378 34.615 1.11 0.00 0.00 3.85
1051 3632 3.998913 TGCAGATATCAACCAACTCCA 57.001 42.857 5.32 0.00 0.00 3.86
1052 3633 3.877559 TGCAGATATCAACCAACTCCAG 58.122 45.455 5.32 0.00 0.00 3.86
1064 3645 4.526970 ACCAACTCCAGCGATCAATTAAT 58.473 39.130 0.00 0.00 0.00 1.40
1101 3682 3.571741 GCTACAGCGTGAGTATCCC 57.428 57.895 0.00 0.00 0.00 3.85
1102 3683 0.744874 GCTACAGCGTGAGTATCCCA 59.255 55.000 0.00 0.00 0.00 4.37
1118 3699 1.559682 TCCCACATCTAGCCTTTGTCC 59.440 52.381 0.00 0.00 0.00 4.02
1205 3786 6.183360 GCTAGCTCAGTGTATTGTTTTGTAGG 60.183 42.308 7.70 0.00 0.00 3.18
1229 3817 2.583593 GATGAGCTCCACGGACGC 60.584 66.667 12.15 0.79 0.00 5.19
1335 3923 9.891893 GAGATCATTCTCAAGGACAAGCCTGAA 62.892 44.444 0.00 0.00 45.84 3.02
1341 3929 2.035442 GGACAAGCCTGAAGCCGAC 61.035 63.158 0.00 0.00 45.47 4.79
1392 3980 1.303643 CCTGGACTTGAGGCCCAAC 60.304 63.158 0.00 0.00 0.00 3.77
1419 4007 1.466697 CGCAACTTTGTTGACACCGTT 60.467 47.619 13.75 0.00 0.00 4.44
1437 4025 1.104577 TTGCCGAAACACCCTTCACC 61.105 55.000 0.00 0.00 0.00 4.02
1499 4087 2.551032 ACCATGCATGCTCATGAATACG 59.449 45.455 21.69 5.45 44.94 3.06
1512 4100 7.914871 TGCTCATGAATACGTTTTTATCAATGG 59.085 33.333 0.00 0.00 0.00 3.16
1534 4122 5.597594 TGGATAAATAAATGCAGGCATGTCA 59.402 36.000 7.64 0.00 36.68 3.58
1539 4127 1.191535 AATGCAGGCATGTCAAGCAT 58.808 45.000 20.32 20.32 46.86 3.79
1544 4132 1.746787 CAGGCATGTCAAGCATTAGCA 59.253 47.619 0.00 0.00 45.49 3.49
1545 4133 2.361119 CAGGCATGTCAAGCATTAGCAT 59.639 45.455 0.00 0.00 45.49 3.79
1546 4134 2.361119 AGGCATGTCAAGCATTAGCATG 59.639 45.455 0.00 0.00 45.49 4.06
1619 4207 5.655974 AGTTTGATGAGAGAGTGCTAGATCA 59.344 40.000 0.00 0.00 0.00 2.92
1625 4213 5.610398 TGAGAGAGTGCTAGATCAGAGTAG 58.390 45.833 0.00 0.00 0.00 2.57
1636 4224 8.409371 TGCTAGATCAGAGTAGTTGATTAACTG 58.591 37.037 12.85 0.00 46.28 3.16
1649 4237 4.421058 TGATTAACTGAATGTCGTCCTCG 58.579 43.478 0.00 0.00 38.55 4.63
1663 4251 0.104304 TCCTCGAAATTAGAGCGGCC 59.896 55.000 0.00 0.00 34.56 6.13
1664 4252 0.179084 CCTCGAAATTAGAGCGGCCA 60.179 55.000 2.24 0.00 34.56 5.36
1665 4253 1.651987 CTCGAAATTAGAGCGGCCAA 58.348 50.000 2.24 0.00 0.00 4.52
1666 4254 2.213499 CTCGAAATTAGAGCGGCCAAT 58.787 47.619 2.24 0.00 0.00 3.16
1667 4255 2.614057 CTCGAAATTAGAGCGGCCAATT 59.386 45.455 2.24 0.00 0.00 2.32
1668 4256 2.354510 TCGAAATTAGAGCGGCCAATTG 59.645 45.455 2.24 0.00 0.00 2.32
1669 4257 2.463876 GAAATTAGAGCGGCCAATTGC 58.536 47.619 2.24 0.00 40.16 3.56
1670 4258 1.473258 AATTAGAGCGGCCAATTGCA 58.527 45.000 2.24 0.00 43.89 4.08
1671 4259 0.740737 ATTAGAGCGGCCAATTGCAC 59.259 50.000 2.24 0.00 43.89 4.57
1673 4261 0.539518 TAGAGCGGCCAATTGCACTA 59.460 50.000 2.24 3.32 43.89 2.74
1674 4262 0.322456 AGAGCGGCCAATTGCACTAA 60.322 50.000 2.24 0.00 43.89 2.24
1675 4263 0.740737 GAGCGGCCAATTGCACTAAT 59.259 50.000 2.24 0.00 43.89 1.73
1676 4264 1.134946 GAGCGGCCAATTGCACTAATT 59.865 47.619 2.24 0.00 43.89 1.40
1677 4265 1.134946 AGCGGCCAATTGCACTAATTC 59.865 47.619 2.24 0.00 43.89 2.17
1678 4266 1.135141 GCGGCCAATTGCACTAATTCA 60.135 47.619 2.24 0.00 43.89 2.57
1679 4267 2.481795 GCGGCCAATTGCACTAATTCAT 60.482 45.455 2.24 0.00 43.89 2.57
1680 4268 3.374745 CGGCCAATTGCACTAATTCATC 58.625 45.455 2.24 0.00 43.89 2.92
1682 4270 4.275689 CGGCCAATTGCACTAATTCATCTA 59.724 41.667 2.24 0.00 43.89 1.98
1683 4271 5.221028 CGGCCAATTGCACTAATTCATCTAA 60.221 40.000 2.24 0.00 43.89 2.10
1684 4272 6.572519 GGCCAATTGCACTAATTCATCTAAA 58.427 36.000 0.00 0.00 43.89 1.85
1685 4273 6.476706 GGCCAATTGCACTAATTCATCTAAAC 59.523 38.462 0.00 0.00 43.89 2.01
1686 4274 6.476706 GCCAATTGCACTAATTCATCTAAACC 59.523 38.462 0.00 0.00 36.87 3.27
1687 4275 6.980397 CCAATTGCACTAATTCATCTAAACCC 59.020 38.462 0.00 0.00 36.87 4.11
1688 4276 5.811399 TTGCACTAATTCATCTAAACCCG 57.189 39.130 0.00 0.00 0.00 5.28
1689 4277 5.092554 TGCACTAATTCATCTAAACCCGA 57.907 39.130 0.00 0.00 0.00 5.14
1690 4278 5.492895 TGCACTAATTCATCTAAACCCGAA 58.507 37.500 0.00 0.00 0.00 4.30
1691 4279 5.941058 TGCACTAATTCATCTAAACCCGAAA 59.059 36.000 0.00 0.00 0.00 3.46
1692 4280 6.093495 TGCACTAATTCATCTAAACCCGAAAG 59.907 38.462 0.00 0.00 0.00 2.62
1693 4281 6.487103 CACTAATTCATCTAAACCCGAAAGC 58.513 40.000 0.00 0.00 0.00 3.51
1694 4282 6.093495 CACTAATTCATCTAAACCCGAAAGCA 59.907 38.462 0.00 0.00 0.00 3.91
1697 4285 2.073816 CATCTAAACCCGAAAGCACGT 58.926 47.619 0.00 0.00 0.00 4.49
1698 4286 3.056678 TCATCTAAACCCGAAAGCACGTA 60.057 43.478 0.00 0.00 0.00 3.57
1699 4287 3.598019 TCTAAACCCGAAAGCACGTAT 57.402 42.857 0.00 0.00 0.00 3.06
1700 4288 4.717233 TCTAAACCCGAAAGCACGTATA 57.283 40.909 0.00 0.00 0.00 1.47
1703 4291 3.598019 AACCCGAAAGCACGTATAGAA 57.402 42.857 0.00 0.00 0.00 2.10
1704 4292 3.598019 ACCCGAAAGCACGTATAGAAA 57.402 42.857 0.00 0.00 0.00 2.52
1705 4293 3.929094 ACCCGAAAGCACGTATAGAAAA 58.071 40.909 0.00 0.00 0.00 2.29
1709 4297 6.594937 ACCCGAAAGCACGTATAGAAAAATAA 59.405 34.615 0.00 0.00 0.00 1.40
1711 4299 7.964011 CCCGAAAGCACGTATAGAAAAATAAAA 59.036 33.333 0.00 0.00 0.00 1.52
1712 4300 9.332301 CCGAAAGCACGTATAGAAAAATAAAAA 57.668 29.630 0.00 0.00 0.00 1.94
1731 4319 2.507407 AAAATCCTAAGGAAGCGCCA 57.493 45.000 2.29 0.00 40.02 5.69
1732 4320 2.044123 AAATCCTAAGGAAGCGCCAG 57.956 50.000 2.29 0.00 40.02 4.85
1733 4321 0.464554 AATCCTAAGGAAGCGCCAGC 60.465 55.000 2.29 0.00 40.02 4.85
1734 4322 1.626356 ATCCTAAGGAAGCGCCAGCA 61.626 55.000 2.29 0.00 38.76 4.41
1735 4323 3.784610 ATCCTAAGGAAGCGCCAGCAC 62.785 57.143 2.29 0.00 38.76 4.40
1744 4332 2.967076 CGCCAGCACGTGACACTT 60.967 61.111 22.23 0.00 0.00 3.16
1745 4333 2.633657 GCCAGCACGTGACACTTG 59.366 61.111 22.23 7.68 0.00 3.16
1746 4334 2.896801 GCCAGCACGTGACACTTGG 61.897 63.158 22.23 17.53 0.00 3.61
1747 4335 2.633657 CAGCACGTGACACTTGGC 59.366 61.111 22.23 9.08 0.00 4.52
1748 4336 2.967076 AGCACGTGACACTTGGCG 60.967 61.111 22.23 0.00 0.00 5.69
1749 4337 4.012895 GCACGTGACACTTGGCGG 62.013 66.667 22.23 0.00 0.00 6.13
1750 4338 4.012895 CACGTGACACTTGGCGGC 62.013 66.667 10.90 0.00 0.00 6.53
1751 4339 4.235762 ACGTGACACTTGGCGGCT 62.236 61.111 11.43 0.00 0.00 5.52
1752 4340 3.716006 CGTGACACTTGGCGGCTG 61.716 66.667 11.43 2.32 0.00 4.85
1753 4341 4.030452 GTGACACTTGGCGGCTGC 62.030 66.667 9.72 9.72 41.71 5.25
1754 4342 4.254709 TGACACTTGGCGGCTGCT 62.255 61.111 18.85 0.00 42.25 4.24
1755 4343 3.730761 GACACTTGGCGGCTGCTG 61.731 66.667 18.85 10.33 42.25 4.41
1756 4344 4.254709 ACACTTGGCGGCTGCTGA 62.255 61.111 18.85 5.31 42.25 4.26
1757 4345 3.429141 CACTTGGCGGCTGCTGAG 61.429 66.667 18.85 17.10 42.25 3.35
1758 4346 3.630013 ACTTGGCGGCTGCTGAGA 61.630 61.111 18.85 0.00 42.25 3.27
1759 4347 2.818714 CTTGGCGGCTGCTGAGAG 60.819 66.667 18.85 6.54 42.25 3.20
1766 4354 4.756458 GCTGCTGAGAGCGCACCT 62.756 66.667 11.47 6.01 46.26 4.00
1767 4355 2.814341 CTGCTGAGAGCGCACCTG 60.814 66.667 11.47 3.13 46.26 4.00
1794 4382 4.512053 CCCAAGGGGTAGGCCTTA 57.488 61.111 12.58 0.00 38.25 2.69
1795 4383 2.231642 CCCAAGGGGTAGGCCTTAG 58.768 63.158 12.58 0.00 38.25 2.18
1796 4384 0.623617 CCCAAGGGGTAGGCCTTAGT 60.624 60.000 12.58 0.00 38.25 2.24
1797 4385 1.296002 CCAAGGGGTAGGCCTTAGTT 58.704 55.000 12.58 0.00 34.45 2.24
1798 4386 2.484602 CCAAGGGGTAGGCCTTAGTTA 58.515 52.381 12.58 0.00 34.45 2.24
1799 4387 2.438392 CCAAGGGGTAGGCCTTAGTTAG 59.562 54.545 12.58 0.00 34.45 2.34
1800 4388 3.113043 CAAGGGGTAGGCCTTAGTTAGT 58.887 50.000 12.58 0.00 34.45 2.24
1801 4389 3.503773 AGGGGTAGGCCTTAGTTAGTT 57.496 47.619 12.58 0.00 34.45 2.24
1802 4390 4.632105 AGGGGTAGGCCTTAGTTAGTTA 57.368 45.455 12.58 0.00 34.45 2.24
1803 4391 4.293494 AGGGGTAGGCCTTAGTTAGTTAC 58.707 47.826 12.58 0.00 34.45 2.50
1804 4392 4.015824 AGGGGTAGGCCTTAGTTAGTTACT 60.016 45.833 12.58 0.00 36.54 2.24
1805 4393 4.343526 GGGGTAGGCCTTAGTTAGTTACTC 59.656 50.000 12.58 0.00 35.11 2.59
1806 4394 4.343526 GGGTAGGCCTTAGTTAGTTACTCC 59.656 50.000 12.58 0.00 35.11 3.85
1814 4402 5.394993 CCTTAGTTAGTTACTCCCCGGAAAG 60.395 48.000 0.73 1.46 38.33 2.62
1815 4403 3.514539 AGTTAGTTACTCCCCGGAAAGT 58.485 45.455 0.73 8.63 28.23 2.66
1821 4409 4.078980 AGTTACTCCCCGGAAAGTCCTATA 60.079 45.833 0.73 0.00 33.30 1.31
1830 4418 6.239772 CCCCGGAAAGTCCTATATTAATGACA 60.240 42.308 0.73 0.00 33.30 3.58
1832 4420 8.537016 CCCGGAAAGTCCTATATTAATGACATA 58.463 37.037 0.73 0.00 33.30 2.29
1850 4438 7.936496 TGACATAAGCTATGAAATTTCACCA 57.064 32.000 22.71 12.67 40.49 4.17
1852 4440 8.461222 TGACATAAGCTATGAAATTTCACCAAG 58.539 33.333 22.71 19.23 40.49 3.61
1859 4447 3.963665 TGAAATTTCACCAAGACGCTTG 58.036 40.909 16.91 11.23 31.01 4.01
1871 4459 5.221382 ACCAAGACGCTTGTAGAGTTCTTAA 60.221 40.000 15.28 0.00 32.10 1.85
1872 4460 5.346281 CCAAGACGCTTGTAGAGTTCTTAAG 59.654 44.000 15.28 0.00 32.10 1.85
1873 4461 4.487019 AGACGCTTGTAGAGTTCTTAAGC 58.513 43.478 15.25 15.25 39.47 3.09
1876 4473 3.616560 CGCTTGTAGAGTTCTTAAGCCCA 60.617 47.826 17.57 0.00 39.58 5.36
1885 4482 0.618458 TCTTAAGCCCATGTCCGCTT 59.382 50.000 14.17 14.17 46.68 4.68
1898 4495 4.912528 TGTCCGCTTTTGTTTTGTTTTC 57.087 36.364 0.00 0.00 0.00 2.29
1900 4497 5.710984 TGTCCGCTTTTGTTTTGTTTTCTA 58.289 33.333 0.00 0.00 0.00 2.10
1902 4499 6.254589 TGTCCGCTTTTGTTTTGTTTTCTATG 59.745 34.615 0.00 0.00 0.00 2.23
1926 4529 8.317891 TGTTTTCCTTTCTTTTTCTTGTTTCC 57.682 30.769 0.00 0.00 0.00 3.13
1927 4530 8.154203 TGTTTTCCTTTCTTTTTCTTGTTTCCT 58.846 29.630 0.00 0.00 0.00 3.36
1928 4531 8.999431 GTTTTCCTTTCTTTTTCTTGTTTCCTT 58.001 29.630 0.00 0.00 0.00 3.36
1929 4532 9.567776 TTTTCCTTTCTTTTTCTTGTTTCCTTT 57.432 25.926 0.00 0.00 0.00 3.11
1930 4533 9.567776 TTTCCTTTCTTTTTCTTGTTTCCTTTT 57.432 25.926 0.00 0.00 0.00 2.27
1937 4540 8.921670 TCTTTTTCTTGTTTCCTTTTTCTTTCG 58.078 29.630 0.00 0.00 0.00 3.46
1958 4562 6.079424 TCGGTTGGTTTTCTTTTCCTATTG 57.921 37.500 0.00 0.00 0.00 1.90
1966 4570 8.662255 TGGTTTTCTTTTCCTATTGTCCTACTA 58.338 33.333 0.00 0.00 0.00 1.82
2017 4621 7.095695 TGGTATGCTATTGCTTTTACTTTCC 57.904 36.000 0.00 0.00 40.48 3.13
2022 4626 8.763049 ATGCTATTGCTTTTACTTTCCTTTTC 57.237 30.769 0.00 0.00 40.48 2.29
2023 4627 7.151976 TGCTATTGCTTTTACTTTCCTTTTCC 58.848 34.615 0.00 0.00 40.48 3.13
2037 4641 9.394767 ACTTTCCTTTTCCGTAACTACTTAAAA 57.605 29.630 0.00 0.00 0.00 1.52
2127 4740 8.443953 TTTTTGAATACAAAGACAAATTGGGG 57.556 30.769 0.00 0.00 44.97 4.96
2132 4745 7.454380 TGAATACAAAGACAAATTGGGGAAGAT 59.546 33.333 0.00 0.00 32.02 2.40
2137 4750 2.428530 GACAAATTGGGGAAGATGGCTC 59.571 50.000 0.00 0.00 0.00 4.70
2152 4765 1.600916 GCTCGGCCAACAACCTCTT 60.601 57.895 2.24 0.00 0.00 2.85
2163 4776 5.005740 CCAACAACCTCTTCATGAAGATCA 58.994 41.667 32.75 15.38 45.40 2.92
2166 4779 5.114780 ACAACCTCTTCATGAAGATCATCG 58.885 41.667 32.75 22.03 45.40 3.84
2167 4780 5.105187 ACAACCTCTTCATGAAGATCATCGA 60.105 40.000 32.75 13.58 45.40 3.59
2171 4784 5.221204 CCTCTTCATGAAGATCATCGACTCA 60.221 44.000 32.75 10.93 45.40 3.41
2176 4789 5.301298 TCATGAAGATCATCGACTCAGATGT 59.699 40.000 0.00 0.00 45.96 3.06
2179 4792 5.240403 TGAAGATCATCGACTCAGATGTAGG 59.760 44.000 6.82 0.00 45.96 3.18
2184 4797 4.697828 TCATCGACTCAGATGTAGGCTATC 59.302 45.833 0.00 0.00 45.96 2.08
2198 4811 1.548973 GCTATCCAATCGACACGCCG 61.549 60.000 0.00 0.00 0.00 6.46
2213 4826 2.813179 GCCGCGACACCATCATCAC 61.813 63.158 8.23 0.00 0.00 3.06
2216 4829 1.470805 CCGCGACACCATCATCACTAA 60.471 52.381 8.23 0.00 0.00 2.24
2220 4833 4.122776 GCGACACCATCATCACTAAAGAT 58.877 43.478 0.00 0.00 0.00 2.40
2228 4841 6.931281 ACCATCATCACTAAAGATAACATCGG 59.069 38.462 0.00 0.00 0.00 4.18
2238 4851 5.854010 AAGATAACATCGGCTAGAAGTGA 57.146 39.130 0.00 0.00 30.34 3.41
2239 4852 5.446143 AGATAACATCGGCTAGAAGTGAG 57.554 43.478 0.00 0.00 30.34 3.51
2243 4856 1.403687 ATCGGCTAGAAGTGAGGGCC 61.404 60.000 0.00 0.00 39.43 5.80
2261 4874 1.416772 GCCCCTCCTCTGTAATGGTAC 59.583 57.143 0.00 0.00 0.00 3.34
2298 4911 0.899717 ATTGGCCATTGTGTTCGCCT 60.900 50.000 6.09 0.00 42.15 5.52
2300 4913 2.480555 GCCATTGTGTTCGCCTCG 59.519 61.111 0.00 0.00 0.00 4.63
2302 4915 1.852067 GCCATTGTGTTCGCCTCGTT 61.852 55.000 0.00 0.00 0.00 3.85
2313 4926 3.177600 CCTCGTTTGGCATCGTGG 58.822 61.111 15.25 15.25 35.14 4.94
2363 4976 9.388506 CATGTTATGGATTCTGATATCTAACCC 57.611 37.037 3.98 0.00 0.00 4.11
2387 5000 5.533533 TCCAATTAAAACGGTGTATGTCG 57.466 39.130 0.00 0.00 0.00 4.35
2397 5010 7.740519 AAACGGTGTATGTCGTAAACTATAC 57.259 36.000 0.00 0.00 38.78 1.47
2408 5021 5.807011 GTCGTAAACTATACGGTTTGGTGAT 59.193 40.000 8.00 0.00 39.39 3.06
2411 5024 4.563140 AACTATACGGTTTGGTGATGGT 57.437 40.909 0.00 0.00 0.00 3.55
2412 5025 4.133013 ACTATACGGTTTGGTGATGGTC 57.867 45.455 0.00 0.00 0.00 4.02
2413 5026 2.018542 ATACGGTTTGGTGATGGTCG 57.981 50.000 0.00 0.00 0.00 4.79
2414 5027 0.680618 TACGGTTTGGTGATGGTCGT 59.319 50.000 0.00 0.00 0.00 4.34
2483 5096 3.145228 GAAGAGTTCTTCGCCCCTG 57.855 57.895 6.16 0.00 42.33 4.45
2484 5097 0.608640 GAAGAGTTCTTCGCCCCTGA 59.391 55.000 6.16 0.00 42.33 3.86
2485 5098 1.208293 GAAGAGTTCTTCGCCCCTGAT 59.792 52.381 6.16 0.00 42.33 2.90
2486 5099 1.280457 AGAGTTCTTCGCCCCTGATT 58.720 50.000 0.00 0.00 0.00 2.57
2487 5100 1.630878 AGAGTTCTTCGCCCCTGATTT 59.369 47.619 0.00 0.00 0.00 2.17
2488 5101 2.040412 AGAGTTCTTCGCCCCTGATTTT 59.960 45.455 0.00 0.00 0.00 1.82
2489 5102 3.263425 AGAGTTCTTCGCCCCTGATTTTA 59.737 43.478 0.00 0.00 0.00 1.52
2490 5103 4.080299 AGAGTTCTTCGCCCCTGATTTTAT 60.080 41.667 0.00 0.00 0.00 1.40
2491 5104 4.600062 AGTTCTTCGCCCCTGATTTTATT 58.400 39.130 0.00 0.00 0.00 1.40
2492 5105 5.751586 AGTTCTTCGCCCCTGATTTTATTA 58.248 37.500 0.00 0.00 0.00 0.98
2493 5106 6.184789 AGTTCTTCGCCCCTGATTTTATTAA 58.815 36.000 0.00 0.00 0.00 1.40
2494 5107 6.318900 AGTTCTTCGCCCCTGATTTTATTAAG 59.681 38.462 0.00 0.00 0.00 1.85
2495 5108 5.996644 TCTTCGCCCCTGATTTTATTAAGA 58.003 37.500 0.00 0.00 0.00 2.10
2496 5109 6.419791 TCTTCGCCCCTGATTTTATTAAGAA 58.580 36.000 0.00 0.00 0.00 2.52
2497 5110 6.887545 TCTTCGCCCCTGATTTTATTAAGAAA 59.112 34.615 0.00 0.00 0.00 2.52
2498 5111 6.445357 TCGCCCCTGATTTTATTAAGAAAC 57.555 37.500 0.00 0.00 0.00 2.78
2499 5112 5.358725 TCGCCCCTGATTTTATTAAGAAACC 59.641 40.000 0.00 0.00 0.00 3.27
2500 5113 5.588240 GCCCCTGATTTTATTAAGAAACCG 58.412 41.667 0.00 0.00 0.00 4.44
2501 5114 5.358725 GCCCCTGATTTTATTAAGAAACCGA 59.641 40.000 0.00 0.00 0.00 4.69
2502 5115 6.040504 GCCCCTGATTTTATTAAGAAACCGAT 59.959 38.462 0.00 0.00 0.00 4.18
2503 5116 7.425606 CCCCTGATTTTATTAAGAAACCGATG 58.574 38.462 0.00 0.00 0.00 3.84
2504 5117 7.284489 CCCCTGATTTTATTAAGAAACCGATGA 59.716 37.037 0.00 0.00 0.00 2.92
2505 5118 8.129211 CCCTGATTTTATTAAGAAACCGATGAC 58.871 37.037 0.00 0.00 0.00 3.06
2506 5119 8.673711 CCTGATTTTATTAAGAAACCGATGACA 58.326 33.333 0.00 0.00 0.00 3.58
2507 5120 9.490663 CTGATTTTATTAAGAAACCGATGACAC 57.509 33.333 0.00 0.00 0.00 3.67
2508 5121 9.004717 TGATTTTATTAAGAAACCGATGACACA 57.995 29.630 0.00 0.00 0.00 3.72
2510 5123 9.787532 ATTTTATTAAGAAACCGATGACACATG 57.212 29.630 0.00 0.00 0.00 3.21
2511 5124 8.554835 TTTATTAAGAAACCGATGACACATGA 57.445 30.769 0.00 0.00 0.00 3.07
2512 5125 5.856126 TTAAGAAACCGATGACACATGAC 57.144 39.130 0.00 0.00 0.00 3.06
2513 5126 2.699954 AGAAACCGATGACACATGACC 58.300 47.619 0.00 0.00 0.00 4.02
2514 5127 1.737793 GAAACCGATGACACATGACCC 59.262 52.381 0.00 0.00 0.00 4.46
2515 5128 0.690192 AACCGATGACACATGACCCA 59.310 50.000 0.00 0.00 0.00 4.51
2516 5129 0.250234 ACCGATGACACATGACCCAG 59.750 55.000 0.00 0.00 0.00 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 1.228337 AATATAAACGCCCGGGCCC 60.228 57.895 39.24 13.57 37.98 5.80
9 10 1.600485 GTGTCAATATAAACGCCCGGG 59.400 52.381 19.09 19.09 0.00 5.73
19 20 3.377798 TCCGTGTAGTGCGTGTCAATATA 59.622 43.478 0.00 0.00 0.00 0.86
25 26 1.425412 AATTCCGTGTAGTGCGTGTC 58.575 50.000 0.00 0.00 0.00 3.67
26 27 1.529438 CAAATTCCGTGTAGTGCGTGT 59.471 47.619 0.00 0.00 0.00 4.49
34 35 3.195471 TGTCCACACAAATTCCGTGTA 57.805 42.857 11.95 0.00 45.63 2.90
36 37 2.726633 GTTGTCCACACAAATTCCGTG 58.273 47.619 6.45 6.45 44.32 4.94
39 40 1.950909 TCCGTTGTCCACACAAATTCC 59.049 47.619 0.00 0.00 44.32 3.01
70 71 1.902508 TGCAAAGAGAGATTCCGACCT 59.097 47.619 0.00 0.00 0.00 3.85
73 74 3.616956 ATGTGCAAAGAGAGATTCCGA 57.383 42.857 0.00 0.00 0.00 4.55
85 1764 1.846007 AAGGCCCGATTATGTGCAAA 58.154 45.000 0.00 0.00 0.00 3.68
106 1785 0.411058 ACAGTAGGTAACCCGGGACT 59.589 55.000 32.02 16.84 35.12 3.85
111 1790 5.824624 TCTCTAATACACAGTAGGTAACCCG 59.175 44.000 0.00 0.00 35.12 5.28
112 1791 7.836479 ATCTCTAATACACAGTAGGTAACCC 57.164 40.000 0.00 0.00 37.17 4.11
125 1804 9.745880 GGAGACGAATTACAAATCTCTAATACA 57.254 33.333 0.00 0.00 36.77 2.29
126 1805 9.968870 AGGAGACGAATTACAAATCTCTAATAC 57.031 33.333 0.00 0.00 36.77 1.89
130 1809 9.575868 AGATAGGAGACGAATTACAAATCTCTA 57.424 33.333 0.00 0.00 36.77 2.43
131 1810 8.472007 AGATAGGAGACGAATTACAAATCTCT 57.528 34.615 0.00 0.00 36.77 3.10
141 1820 9.589461 TCCTAAAGATAAGATAGGAGACGAATT 57.411 33.333 0.00 0.00 40.13 2.17
149 1828 7.109901 AGCCTCTCCTAAAGATAAGATAGGA 57.890 40.000 0.00 0.00 42.18 2.94
150 1829 7.673926 AGAAGCCTCTCCTAAAGATAAGATAGG 59.326 40.741 0.00 0.00 38.02 2.57
151 1830 8.650143 AGAAGCCTCTCCTAAAGATAAGATAG 57.350 38.462 0.00 0.00 32.19 2.08
152 1831 8.865090 CAAGAAGCCTCTCCTAAAGATAAGATA 58.135 37.037 0.00 0.00 32.19 1.98
153 1832 7.346960 ACAAGAAGCCTCTCCTAAAGATAAGAT 59.653 37.037 0.00 0.00 32.19 2.40
154 1833 6.670027 ACAAGAAGCCTCTCCTAAAGATAAGA 59.330 38.462 0.00 0.00 32.19 2.10
155 1834 6.883744 ACAAGAAGCCTCTCCTAAAGATAAG 58.116 40.000 0.00 0.00 32.19 1.73
156 1835 6.127026 GGACAAGAAGCCTCTCCTAAAGATAA 60.127 42.308 0.00 0.00 32.19 1.75
157 1836 5.364157 GGACAAGAAGCCTCTCCTAAAGATA 59.636 44.000 0.00 0.00 32.19 1.98
158 1837 4.163268 GGACAAGAAGCCTCTCCTAAAGAT 59.837 45.833 0.00 0.00 32.19 2.40
159 1838 3.515901 GGACAAGAAGCCTCTCCTAAAGA 59.484 47.826 0.00 0.00 0.00 2.52
160 1839 3.517500 AGGACAAGAAGCCTCTCCTAAAG 59.482 47.826 0.00 0.00 31.20 1.85
161 1840 3.521727 AGGACAAGAAGCCTCTCCTAAA 58.478 45.455 0.00 0.00 31.20 1.85
162 1841 3.191888 AGGACAAGAAGCCTCTCCTAA 57.808 47.619 0.00 0.00 31.20 2.69
163 1842 2.930109 AGGACAAGAAGCCTCTCCTA 57.070 50.000 0.00 0.00 31.20 2.94
164 1843 1.905894 GAAGGACAAGAAGCCTCTCCT 59.094 52.381 0.00 0.00 33.22 3.69
165 1844 1.625818 TGAAGGACAAGAAGCCTCTCC 59.374 52.381 0.00 0.00 32.07 3.71
166 1845 3.269178 CATGAAGGACAAGAAGCCTCTC 58.731 50.000 0.00 0.00 32.07 3.20
167 1846 2.641815 ACATGAAGGACAAGAAGCCTCT 59.358 45.455 0.00 0.00 32.07 3.69
168 1847 3.006247 GACATGAAGGACAAGAAGCCTC 58.994 50.000 0.00 0.00 32.07 4.70
169 1848 2.641815 AGACATGAAGGACAAGAAGCCT 59.358 45.455 0.00 0.00 35.61 4.58
170 1849 3.006247 GAGACATGAAGGACAAGAAGCC 58.994 50.000 0.00 0.00 0.00 4.35
171 1850 3.936564 AGAGACATGAAGGACAAGAAGC 58.063 45.455 0.00 0.00 0.00 3.86
172 1851 6.279513 AGTAGAGACATGAAGGACAAGAAG 57.720 41.667 0.00 0.00 0.00 2.85
173 1852 5.186021 GGAGTAGAGACATGAAGGACAAGAA 59.814 44.000 0.00 0.00 0.00 2.52
174 1853 4.707448 GGAGTAGAGACATGAAGGACAAGA 59.293 45.833 0.00 0.00 0.00 3.02
175 1854 4.709397 AGGAGTAGAGACATGAAGGACAAG 59.291 45.833 0.00 0.00 0.00 3.16
176 1855 4.678256 AGGAGTAGAGACATGAAGGACAA 58.322 43.478 0.00 0.00 0.00 3.18
177 1856 4.323569 AGGAGTAGAGACATGAAGGACA 57.676 45.455 0.00 0.00 0.00 4.02
178 1857 6.777213 TTTAGGAGTAGAGACATGAAGGAC 57.223 41.667 0.00 0.00 0.00 3.85
182 1861 9.026121 GGCTATATTTAGGAGTAGAGACATGAA 57.974 37.037 0.00 0.00 0.00 2.57
183 1862 7.616150 GGGCTATATTTAGGAGTAGAGACATGA 59.384 40.741 0.00 0.00 0.00 3.07
184 1863 7.415765 CGGGCTATATTTAGGAGTAGAGACATG 60.416 44.444 0.00 0.00 0.00 3.21
185 1864 6.603997 CGGGCTATATTTAGGAGTAGAGACAT 59.396 42.308 0.00 0.00 0.00 3.06
186 1865 5.944599 CGGGCTATATTTAGGAGTAGAGACA 59.055 44.000 0.00 0.00 0.00 3.41
187 1866 5.945191 ACGGGCTATATTTAGGAGTAGAGAC 59.055 44.000 0.00 0.00 0.00 3.36
188 1867 5.944599 CACGGGCTATATTTAGGAGTAGAGA 59.055 44.000 0.00 0.00 0.00 3.10
189 1868 5.944599 TCACGGGCTATATTTAGGAGTAGAG 59.055 44.000 0.00 0.00 0.00 2.43
190 1869 5.884322 TCACGGGCTATATTTAGGAGTAGA 58.116 41.667 0.00 0.00 0.00 2.59
191 1870 5.125739 CCTCACGGGCTATATTTAGGAGTAG 59.874 48.000 0.00 0.00 0.00 2.57
192 1871 5.014858 CCTCACGGGCTATATTTAGGAGTA 58.985 45.833 0.00 0.00 0.00 2.59
193 1872 3.833070 CCTCACGGGCTATATTTAGGAGT 59.167 47.826 0.00 0.00 0.00 3.85
194 1873 4.457834 CCTCACGGGCTATATTTAGGAG 57.542 50.000 0.00 0.00 0.00 3.69
207 1886 1.066143 AGTTGTATTGAGCCTCACGGG 60.066 52.381 0.00 0.00 38.36 5.28
208 1887 2.386661 AGTTGTATTGAGCCTCACGG 57.613 50.000 0.00 0.00 0.00 4.94
209 1888 2.673368 GGAAGTTGTATTGAGCCTCACG 59.327 50.000 0.00 0.00 0.00 4.35
210 1889 3.674997 TGGAAGTTGTATTGAGCCTCAC 58.325 45.455 0.00 0.00 0.00 3.51
211 1890 4.072131 GTTGGAAGTTGTATTGAGCCTCA 58.928 43.478 0.00 0.00 0.00 3.86
212 1891 3.125316 CGTTGGAAGTTGTATTGAGCCTC 59.875 47.826 0.00 0.00 0.00 4.70
213 1892 3.074412 CGTTGGAAGTTGTATTGAGCCT 58.926 45.455 0.00 0.00 0.00 4.58
214 1893 3.071479 TCGTTGGAAGTTGTATTGAGCC 58.929 45.455 0.00 0.00 0.00 4.70
215 1894 4.946784 ATCGTTGGAAGTTGTATTGAGC 57.053 40.909 0.00 0.00 0.00 4.26
216 1895 5.411361 TGGAATCGTTGGAAGTTGTATTGAG 59.589 40.000 0.00 0.00 0.00 3.02
217 1896 5.309638 TGGAATCGTTGGAAGTTGTATTGA 58.690 37.500 0.00 0.00 0.00 2.57
218 1897 5.621197 TGGAATCGTTGGAAGTTGTATTG 57.379 39.130 0.00 0.00 0.00 1.90
219 1898 6.436843 GATGGAATCGTTGGAAGTTGTATT 57.563 37.500 0.00 0.00 31.13 1.89
234 1913 5.104569 GGGATAGAGAGGGATTGATGGAATC 60.105 48.000 0.00 0.00 45.83 2.52
235 1914 4.787534 GGGATAGAGAGGGATTGATGGAAT 59.212 45.833 0.00 0.00 0.00 3.01
236 1915 4.140350 AGGGATAGAGAGGGATTGATGGAA 60.140 45.833 0.00 0.00 0.00 3.53
237 1916 3.407540 AGGGATAGAGAGGGATTGATGGA 59.592 47.826 0.00 0.00 0.00 3.41
238 1917 3.800924 AGGGATAGAGAGGGATTGATGG 58.199 50.000 0.00 0.00 0.00 3.51
239 1918 5.839517 AAAGGGATAGAGAGGGATTGATG 57.160 43.478 0.00 0.00 0.00 3.07
240 1919 7.350921 TGTTAAAAGGGATAGAGAGGGATTGAT 59.649 37.037 0.00 0.00 0.00 2.57
241 1920 6.676632 TGTTAAAAGGGATAGAGAGGGATTGA 59.323 38.462 0.00 0.00 0.00 2.57
242 1921 6.900194 TGTTAAAAGGGATAGAGAGGGATTG 58.100 40.000 0.00 0.00 0.00 2.67
243 1922 6.678857 ACTGTTAAAAGGGATAGAGAGGGATT 59.321 38.462 0.00 0.00 0.00 3.01
244 1923 6.100424 CACTGTTAAAAGGGATAGAGAGGGAT 59.900 42.308 0.00 0.00 0.00 3.85
245 1924 5.425539 CACTGTTAAAAGGGATAGAGAGGGA 59.574 44.000 0.00 0.00 0.00 4.20
246 1925 5.189934 ACACTGTTAAAAGGGATAGAGAGGG 59.810 44.000 0.63 0.00 0.00 4.30
247 1926 6.301169 ACACTGTTAAAAGGGATAGAGAGG 57.699 41.667 0.63 0.00 0.00 3.69
248 1927 6.037098 CGACACTGTTAAAAGGGATAGAGAG 58.963 44.000 0.63 0.00 0.00 3.20
249 1928 5.713389 TCGACACTGTTAAAAGGGATAGAGA 59.287 40.000 0.63 0.00 0.00 3.10
250 1929 5.805994 GTCGACACTGTTAAAAGGGATAGAG 59.194 44.000 11.55 0.00 0.00 2.43
251 1930 5.337009 GGTCGACACTGTTAAAAGGGATAGA 60.337 44.000 18.91 0.00 0.00 1.98
252 1931 4.868734 GGTCGACACTGTTAAAAGGGATAG 59.131 45.833 18.91 0.00 0.00 2.08
253 1932 4.283978 TGGTCGACACTGTTAAAAGGGATA 59.716 41.667 18.91 0.00 0.00 2.59
254 1933 3.071892 TGGTCGACACTGTTAAAAGGGAT 59.928 43.478 18.91 0.00 0.00 3.85
255 1934 2.435069 TGGTCGACACTGTTAAAAGGGA 59.565 45.455 18.91 0.00 0.00 4.20
256 1935 2.806244 CTGGTCGACACTGTTAAAAGGG 59.194 50.000 18.91 0.00 0.00 3.95
257 1936 2.806244 CCTGGTCGACACTGTTAAAAGG 59.194 50.000 18.91 5.64 0.00 3.11
258 1937 3.724374 TCCTGGTCGACACTGTTAAAAG 58.276 45.455 18.91 0.00 0.00 2.27
259 1938 3.493699 CCTCCTGGTCGACACTGTTAAAA 60.494 47.826 18.91 0.00 0.00 1.52
260 1939 2.036733 CCTCCTGGTCGACACTGTTAAA 59.963 50.000 18.91 0.00 0.00 1.52
261 1940 1.616865 CCTCCTGGTCGACACTGTTAA 59.383 52.381 18.91 0.00 0.00 2.01
262 1941 1.202964 TCCTCCTGGTCGACACTGTTA 60.203 52.381 18.91 0.00 34.23 2.41
263 1942 0.469331 TCCTCCTGGTCGACACTGTT 60.469 55.000 18.91 0.00 34.23 3.16
264 1943 1.153061 TCCTCCTGGTCGACACTGT 59.847 57.895 18.91 0.00 34.23 3.55
265 1944 1.587054 GTCCTCCTGGTCGACACTG 59.413 63.158 18.91 10.41 34.23 3.66
266 1945 1.606889 GGTCCTCCTGGTCGACACT 60.607 63.158 18.91 0.00 34.23 3.55
267 1946 1.596895 GAGGTCCTCCTGGTCGACAC 61.597 65.000 18.91 7.49 45.24 3.67
268 1947 1.304217 GAGGTCCTCCTGGTCGACA 60.304 63.158 18.91 2.63 45.24 4.35
290 1969 3.723348 GACAAGCCCGACGCCAAC 61.723 66.667 0.00 0.00 38.78 3.77
296 1975 1.376037 CCTCAAGGACAAGCCCGAC 60.376 63.158 0.00 0.00 37.37 4.79
336 2015 2.029307 GAGGTGGTAGGGATGTCCGC 62.029 65.000 0.00 0.00 41.52 5.54
347 2026 1.305802 ATCGTGGCTGGAGGTGGTA 60.306 57.895 0.00 0.00 0.00 3.25
357 2036 0.250467 AGCACAAAGACATCGTGGCT 60.250 50.000 0.00 0.00 37.28 4.75
395 2074 0.600255 GTGAAGTACCACAGCGTGCT 60.600 55.000 3.56 0.00 37.04 4.40
396 2075 1.860078 GTGAAGTACCACAGCGTGC 59.140 57.895 3.56 0.00 37.04 5.34
398 2077 1.663702 GCGTGAAGTACCACAGCGT 60.664 57.895 3.62 0.00 36.89 5.07
399 2078 2.380410 GGCGTGAAGTACCACAGCG 61.380 63.158 3.62 5.68 37.41 5.18
400 2079 2.380410 CGGCGTGAAGTACCACAGC 61.380 63.158 0.00 6.75 36.89 4.40
401 2080 0.599204 AACGGCGTGAAGTACCACAG 60.599 55.000 15.70 0.00 36.89 3.66
402 2081 0.598158 GAACGGCGTGAAGTACCACA 60.598 55.000 15.70 0.00 36.89 4.17
404 2083 1.372004 CGAACGGCGTGAAGTACCA 60.372 57.895 15.70 0.00 34.64 3.25
405 2084 2.723719 GCGAACGGCGTGAAGTACC 61.724 63.158 15.70 0.00 43.41 3.34
406 2085 2.723719 GGCGAACGGCGTGAAGTAC 61.724 63.158 15.70 0.00 44.92 2.73
418 2101 2.271800 CTGAGTTATGTGGAGGCGAAC 58.728 52.381 0.00 0.00 0.00 3.95
421 2104 0.811616 GCCTGAGTTATGTGGAGGCG 60.812 60.000 0.00 0.00 39.91 5.52
431 2114 7.584122 AGAGTTTATCGAATAGCCTGAGTTA 57.416 36.000 0.00 0.00 0.00 2.24
438 2121 6.223852 TGATCCAAGAGTTTATCGAATAGCC 58.776 40.000 0.00 0.00 0.00 3.93
470 2153 9.836864 AGTGATTATATCATGCTTAACACTTCA 57.163 29.630 0.00 0.00 42.04 3.02
472 2155 9.060347 CCAGTGATTATATCATGCTTAACACTT 57.940 33.333 0.00 0.00 42.04 3.16
473 2156 7.663081 CCCAGTGATTATATCATGCTTAACACT 59.337 37.037 0.00 0.00 42.04 3.55
504 2187 5.601583 ACTCCGTTTTGTTTACCCATTTT 57.398 34.783 0.00 0.00 0.00 1.82
514 2197 3.252458 GCCTTGTCATACTCCGTTTTGTT 59.748 43.478 0.00 0.00 0.00 2.83
516 2199 2.811431 TGCCTTGTCATACTCCGTTTTG 59.189 45.455 0.00 0.00 0.00 2.44
521 2204 0.108186 TGCTGCCTTGTCATACTCCG 60.108 55.000 0.00 0.00 0.00 4.63
522 2205 1.339055 TGTGCTGCCTTGTCATACTCC 60.339 52.381 0.00 0.00 0.00 3.85
523 2206 2.005451 CTGTGCTGCCTTGTCATACTC 58.995 52.381 0.00 0.00 0.00 2.59
524 2207 1.625315 TCTGTGCTGCCTTGTCATACT 59.375 47.619 0.00 0.00 0.00 2.12
525 2208 1.734465 GTCTGTGCTGCCTTGTCATAC 59.266 52.381 0.00 0.00 0.00 2.39
599 2282 8.984764 GTATAAATGTCACACAATAAGCCGATA 58.015 33.333 0.00 0.00 0.00 2.92
609 2292 9.283768 AGATGTTCTTGTATAAATGTCACACAA 57.716 29.630 0.00 0.00 0.00 3.33
610 2293 8.846943 AGATGTTCTTGTATAAATGTCACACA 57.153 30.769 0.00 0.00 0.00 3.72
611 2294 9.546909 CAAGATGTTCTTGTATAAATGTCACAC 57.453 33.333 8.72 0.00 46.50 3.82
630 2313 1.273098 ACGGAGGGAGTACCAAGATGT 60.273 52.381 0.00 0.00 43.89 3.06
631 2314 1.409427 GACGGAGGGAGTACCAAGATG 59.591 57.143 0.00 0.00 43.89 2.90
654 2337 6.441604 AGGAATAAGATTGGGACATGCTTTTT 59.558 34.615 0.00 0.00 39.30 1.94
655 2338 5.960202 AGGAATAAGATTGGGACATGCTTTT 59.040 36.000 0.00 0.00 39.30 2.27
656 2339 5.522641 AGGAATAAGATTGGGACATGCTTT 58.477 37.500 0.00 0.00 39.30 3.51
657 2340 5.134725 AGGAATAAGATTGGGACATGCTT 57.865 39.130 0.00 0.00 39.30 3.91
658 2341 4.166725 TGAGGAATAAGATTGGGACATGCT 59.833 41.667 0.00 0.00 39.30 3.79
659 2342 4.464008 TGAGGAATAAGATTGGGACATGC 58.536 43.478 0.00 0.00 39.30 4.06
660 2343 7.431249 CATTTGAGGAATAAGATTGGGACATG 58.569 38.462 0.00 0.00 39.30 3.21
661 2344 6.552350 CCATTTGAGGAATAAGATTGGGACAT 59.448 38.462 0.00 0.00 39.30 3.06
662 2345 5.893255 CCATTTGAGGAATAAGATTGGGACA 59.107 40.000 0.00 0.00 0.00 4.02
663 2346 6.129179 TCCATTTGAGGAATAAGATTGGGAC 58.871 40.000 0.00 0.00 33.93 4.46
664 2347 6.339999 TCCATTTGAGGAATAAGATTGGGA 57.660 37.500 0.00 0.00 33.93 4.37
665 2348 6.552350 ACATCCATTTGAGGAATAAGATTGGG 59.448 38.462 0.00 0.00 41.92 4.12
666 2349 7.592885 ACATCCATTTGAGGAATAAGATTGG 57.407 36.000 0.00 0.00 41.92 3.16
671 2354 9.160496 GCTAGATACATCCATTTGAGGAATAAG 57.840 37.037 0.00 0.00 41.92 1.73
672 2355 8.659527 TGCTAGATACATCCATTTGAGGAATAA 58.340 33.333 0.00 0.00 41.92 1.40
673 2356 8.097038 GTGCTAGATACATCCATTTGAGGAATA 58.903 37.037 0.00 0.00 41.92 1.75
674 2357 6.939163 GTGCTAGATACATCCATTTGAGGAAT 59.061 38.462 0.00 0.00 41.92 3.01
675 2358 6.100279 AGTGCTAGATACATCCATTTGAGGAA 59.900 38.462 0.00 0.00 41.92 3.36
676 2359 5.604231 AGTGCTAGATACATCCATTTGAGGA 59.396 40.000 0.00 0.00 43.01 3.71
677 2360 5.862845 AGTGCTAGATACATCCATTTGAGG 58.137 41.667 0.00 0.00 0.00 3.86
678 2361 8.147058 AGTTAGTGCTAGATACATCCATTTGAG 58.853 37.037 0.00 0.00 0.00 3.02
679 2362 8.023021 AGTTAGTGCTAGATACATCCATTTGA 57.977 34.615 0.00 0.00 0.00 2.69
680 2363 8.554528 CAAGTTAGTGCTAGATACATCCATTTG 58.445 37.037 0.00 0.00 0.00 2.32
681 2364 7.716998 CCAAGTTAGTGCTAGATACATCCATTT 59.283 37.037 0.00 0.00 0.00 2.32
682 2365 7.147479 ACCAAGTTAGTGCTAGATACATCCATT 60.147 37.037 0.00 0.00 0.00 3.16
683 2366 6.327626 ACCAAGTTAGTGCTAGATACATCCAT 59.672 38.462 0.00 0.00 0.00 3.41
684 2367 5.661312 ACCAAGTTAGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
685 2368 5.986135 CACCAAGTTAGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
705 2388 9.981460 TCTCTCAAATAGATATATCTAGCACCA 57.019 33.333 23.38 5.95 42.20 4.17
717 2400 8.191446 CGGAGAAACTTGTCTCTCAAATAGATA 58.809 37.037 6.46 0.00 43.14 1.98
718 2401 7.038659 CGGAGAAACTTGTCTCTCAAATAGAT 58.961 38.462 6.46 0.00 43.14 1.98
719 2402 6.390721 CGGAGAAACTTGTCTCTCAAATAGA 58.609 40.000 6.46 0.00 43.14 1.98
720 2403 5.578727 CCGGAGAAACTTGTCTCTCAAATAG 59.421 44.000 0.00 0.00 43.14 1.73
721 2404 5.479306 CCGGAGAAACTTGTCTCTCAAATA 58.521 41.667 0.00 0.00 43.14 1.40
722 2405 4.319177 CCGGAGAAACTTGTCTCTCAAAT 58.681 43.478 0.00 0.00 43.14 2.32
723 2406 3.494398 CCCGGAGAAACTTGTCTCTCAAA 60.494 47.826 0.73 0.00 43.14 2.69
724 2407 2.037251 CCCGGAGAAACTTGTCTCTCAA 59.963 50.000 0.73 0.00 43.14 3.02
725 2408 1.618837 CCCGGAGAAACTTGTCTCTCA 59.381 52.381 0.73 0.00 43.14 3.27
726 2409 1.673329 GCCCGGAGAAACTTGTCTCTC 60.673 57.143 0.73 0.00 43.14 3.20
727 2410 0.321996 GCCCGGAGAAACTTGTCTCT 59.678 55.000 0.73 0.00 43.14 3.10
728 2411 1.014564 CGCCCGGAGAAACTTGTCTC 61.015 60.000 0.73 0.00 42.90 3.36
729 2412 1.004918 CGCCCGGAGAAACTTGTCT 60.005 57.895 0.73 0.00 0.00 3.41
730 2413 2.033194 CCGCCCGGAGAAACTTGTC 61.033 63.158 0.73 0.00 37.50 3.18
731 2414 2.032071 CCGCCCGGAGAAACTTGT 59.968 61.111 0.73 0.00 37.50 3.16
732 2415 2.345991 TCCGCCCGGAGAAACTTG 59.654 61.111 0.73 0.00 39.76 3.16
740 2423 2.441532 CTACTTCCTCCGCCCGGA 60.442 66.667 0.73 9.31 42.90 5.14
741 2424 1.039233 TAACTACTTCCTCCGCCCGG 61.039 60.000 0.00 0.00 0.00 5.73
742 2425 1.038280 ATAACTACTTCCTCCGCCCG 58.962 55.000 0.00 0.00 0.00 6.13
743 2426 4.100653 AGTTAATAACTACTTCCTCCGCCC 59.899 45.833 3.48 0.00 40.69 6.13
744 2427 5.273674 AGTTAATAACTACTTCCTCCGCC 57.726 43.478 3.48 0.00 40.69 6.13
745 2428 7.487484 ACTTAGTTAATAACTACTTCCTCCGC 58.513 38.462 12.01 0.00 43.30 5.54
758 2441 9.988350 CGTACTTCTCCGTAACTTAGTTAATAA 57.012 33.333 6.38 0.00 29.42 1.40
759 2442 8.122952 GCGTACTTCTCCGTAACTTAGTTAATA 58.877 37.037 6.38 0.00 29.42 0.98
773 2456 1.153823 CCTGGTGCGTACTTCTCCG 60.154 63.158 3.01 0.00 0.00 4.63
867 2554 0.876342 GGCCGCACTAGATTTCCTCG 60.876 60.000 0.00 0.00 0.00 4.63
868 2555 0.178068 TGGCCGCACTAGATTTCCTC 59.822 55.000 0.00 0.00 0.00 3.71
870 2557 1.334869 CATTGGCCGCACTAGATTTCC 59.665 52.381 0.00 0.00 0.00 3.13
937 2628 2.864946 CAGAGAAGAGATTGCACATCGG 59.135 50.000 0.00 0.00 0.00 4.18
938 2629 2.284684 GCAGAGAAGAGATTGCACATCG 59.715 50.000 0.00 0.00 36.59 3.84
948 2639 4.242336 TGAGGTATCTGCAGAGAAGAGA 57.758 45.455 22.96 1.84 0.00 3.10
979 2671 1.596477 GAGATCCACAGATGCGGCC 60.596 63.158 0.00 0.00 30.90 6.13
989 2681 4.222145 TGCGTATTTATAGGGGAGATCCAC 59.778 45.833 0.47 0.00 40.63 4.02
990 2682 4.422057 TGCGTATTTATAGGGGAGATCCA 58.578 43.478 0.47 0.00 37.91 3.41
991 2683 5.615925 ATGCGTATTTATAGGGGAGATCC 57.384 43.478 0.00 0.00 0.00 3.36
992 2684 7.349412 AGTATGCGTATTTATAGGGGAGATC 57.651 40.000 0.00 0.00 0.00 2.75
1025 3606 8.217111 TGGAGTTGGTTGATATCTGCATATAAA 58.783 33.333 3.98 0.00 0.00 1.40
1034 3615 2.766263 TCGCTGGAGTTGGTTGATATCT 59.234 45.455 3.98 0.00 0.00 1.98
1047 3628 5.164012 CGAGCTTATTAATTGATCGCTGGAG 60.164 44.000 13.10 1.59 33.13 3.86
1048 3629 4.686091 CGAGCTTATTAATTGATCGCTGGA 59.314 41.667 13.10 0.00 33.13 3.86
1050 3631 5.164012 CCTCGAGCTTATTAATTGATCGCTG 60.164 44.000 17.85 14.00 39.11 5.18
1051 3632 4.926238 CCTCGAGCTTATTAATTGATCGCT 59.074 41.667 17.85 6.63 39.11 4.93
1052 3633 4.686554 ACCTCGAGCTTATTAATTGATCGC 59.313 41.667 17.85 5.44 39.11 4.58
1064 3645 4.737855 AGCTAAATGAACCTCGAGCTTA 57.262 40.909 6.99 0.00 36.93 3.09
1101 3682 3.877559 TGATGGACAAAGGCTAGATGTG 58.122 45.455 5.38 0.00 0.00 3.21
1102 3683 4.574674 TTGATGGACAAAGGCTAGATGT 57.425 40.909 0.00 0.00 35.39 3.06
1118 3699 8.562892 CCAATGCTAACTAGGTAAAGATTGATG 58.437 37.037 11.88 0.00 0.00 3.07
1151 3732 7.308435 AGCAAGATGTGTTTCTAATTAAGCAC 58.692 34.615 2.06 2.06 39.99 4.40
1170 3751 3.196469 ACACTGAGCTAGCAATAGCAAGA 59.804 43.478 18.83 0.00 45.11 3.02
1205 3786 1.451028 GTGGAGCTCATCTGGCACC 60.451 63.158 17.19 0.00 40.09 5.01
1341 3929 2.579787 GCTGGGACGACGACGATG 60.580 66.667 15.32 0.00 42.66 3.84
1372 3960 2.936032 GGGCCTCAAGTCCAGGGT 60.936 66.667 0.84 0.00 0.00 4.34
1392 3980 1.226547 AACAAAGTTGCGCACACGG 60.227 52.632 11.12 9.56 40.57 4.94
1403 3991 0.454196 GGCAACGGTGTCAACAAAGT 59.546 50.000 0.00 0.00 0.00 2.66
1419 4007 1.527380 GGTGAAGGGTGTTTCGGCA 60.527 57.895 0.00 0.00 0.00 5.69
1458 4046 2.954318 GTGCAGGCATACATTCCTTCAT 59.046 45.455 0.00 0.00 29.00 2.57
1459 4047 2.368439 GTGCAGGCATACATTCCTTCA 58.632 47.619 0.00 0.00 0.00 3.02
1460 4048 1.678101 GGTGCAGGCATACATTCCTTC 59.322 52.381 0.00 0.00 0.00 3.46
1512 4100 6.145048 GCTTGACATGCCTGCATTTATTTATC 59.855 38.462 0.97 0.00 33.90 1.75
1515 4103 4.186159 GCTTGACATGCCTGCATTTATTT 58.814 39.130 0.97 0.00 33.90 1.40
1590 4178 8.367911 TCTAGCACTCTCTCATCAAACTAAAAA 58.632 33.333 0.00 0.00 0.00 1.94
1619 4207 7.603651 ACGACATTCAGTTAATCAACTACTCT 58.396 34.615 0.00 0.00 43.30 3.24
1625 4213 5.220228 CGAGGACGACATTCAGTTAATCAAC 60.220 44.000 0.00 0.00 42.66 3.18
1649 4237 2.159254 TGCAATTGGCCGCTCTAATTTC 60.159 45.455 7.72 0.00 43.89 2.17
1659 4247 2.937469 TGAATTAGTGCAATTGGCCG 57.063 45.000 7.72 0.00 43.89 6.13
1663 4251 6.692681 CGGGTTTAGATGAATTAGTGCAATTG 59.307 38.462 0.00 0.00 36.96 2.32
1664 4252 6.601613 TCGGGTTTAGATGAATTAGTGCAATT 59.398 34.615 0.00 0.00 39.63 2.32
1665 4253 6.119536 TCGGGTTTAGATGAATTAGTGCAAT 58.880 36.000 0.00 0.00 0.00 3.56
1666 4254 5.492895 TCGGGTTTAGATGAATTAGTGCAA 58.507 37.500 0.00 0.00 0.00 4.08
1667 4255 5.092554 TCGGGTTTAGATGAATTAGTGCA 57.907 39.130 0.00 0.00 0.00 4.57
1668 4256 6.431198 TTTCGGGTTTAGATGAATTAGTGC 57.569 37.500 0.00 0.00 0.00 4.40
1669 4257 6.093495 TGCTTTCGGGTTTAGATGAATTAGTG 59.907 38.462 0.00 0.00 0.00 2.74
1670 4258 6.093633 GTGCTTTCGGGTTTAGATGAATTAGT 59.906 38.462 0.00 0.00 0.00 2.24
1671 4259 6.487103 GTGCTTTCGGGTTTAGATGAATTAG 58.513 40.000 0.00 0.00 0.00 1.73
1673 4261 4.142687 CGTGCTTTCGGGTTTAGATGAATT 60.143 41.667 0.00 0.00 0.00 2.17
1674 4262 3.374058 CGTGCTTTCGGGTTTAGATGAAT 59.626 43.478 0.00 0.00 0.00 2.57
1675 4263 2.739913 CGTGCTTTCGGGTTTAGATGAA 59.260 45.455 0.00 0.00 0.00 2.57
1676 4264 2.289195 ACGTGCTTTCGGGTTTAGATGA 60.289 45.455 0.00 0.00 34.94 2.92
1677 4265 2.073816 ACGTGCTTTCGGGTTTAGATG 58.926 47.619 0.00 0.00 34.94 2.90
1678 4266 2.467566 ACGTGCTTTCGGGTTTAGAT 57.532 45.000 0.00 0.00 34.94 1.98
1679 4267 3.598019 ATACGTGCTTTCGGGTTTAGA 57.402 42.857 0.00 0.00 34.94 2.10
1680 4268 4.675510 TCTATACGTGCTTTCGGGTTTAG 58.324 43.478 0.00 0.00 34.94 1.85
1682 4270 3.598019 TCTATACGTGCTTTCGGGTTT 57.402 42.857 0.00 0.00 34.94 3.27
1683 4271 3.598019 TTCTATACGTGCTTTCGGGTT 57.402 42.857 0.00 0.00 34.94 4.11
1684 4272 3.598019 TTTCTATACGTGCTTTCGGGT 57.402 42.857 0.00 0.00 34.94 5.28
1685 4273 4.932268 TTTTTCTATACGTGCTTTCGGG 57.068 40.909 0.00 0.00 34.94 5.14
1686 4274 8.883789 TTTTATTTTTCTATACGTGCTTTCGG 57.116 30.769 0.00 0.00 34.94 4.30
1711 4299 2.755103 CTGGCGCTTCCTTAGGATTTTT 59.245 45.455 7.64 0.00 35.26 1.94
1712 4300 2.369394 CTGGCGCTTCCTTAGGATTTT 58.631 47.619 7.64 0.00 35.26 1.82
1713 4301 2.019156 GCTGGCGCTTCCTTAGGATTT 61.019 52.381 7.64 0.00 35.26 2.17
1714 4302 0.464554 GCTGGCGCTTCCTTAGGATT 60.465 55.000 7.64 0.00 35.26 3.01
1716 4304 2.290287 TGCTGGCGCTTCCTTAGGA 61.290 57.895 7.64 0.00 36.97 2.94
1717 4305 2.109126 GTGCTGGCGCTTCCTTAGG 61.109 63.158 7.64 0.00 36.97 2.69
1718 4306 2.456119 CGTGCTGGCGCTTCCTTAG 61.456 63.158 7.64 0.00 36.97 2.18
1719 4307 2.434185 CGTGCTGGCGCTTCCTTA 60.434 61.111 7.64 0.00 36.97 2.69
1720 4308 4.626081 ACGTGCTGGCGCTTCCTT 62.626 61.111 7.64 0.00 36.97 3.36
1723 4311 4.077188 GTCACGTGCTGGCGCTTC 62.077 66.667 11.67 0.00 36.97 3.86
1724 4312 4.908687 TGTCACGTGCTGGCGCTT 62.909 61.111 11.67 0.00 36.97 4.68
1727 4315 2.967076 AAGTGTCACGTGCTGGCG 60.967 61.111 11.67 0.00 37.94 5.69
1728 4316 2.633657 CAAGTGTCACGTGCTGGC 59.366 61.111 11.67 1.49 0.00 4.85
1729 4317 2.896801 GCCAAGTGTCACGTGCTGG 61.897 63.158 11.67 12.53 0.00 4.85
1730 4318 2.633657 GCCAAGTGTCACGTGCTG 59.366 61.111 11.67 2.76 0.00 4.41
1731 4319 2.967076 CGCCAAGTGTCACGTGCT 60.967 61.111 11.67 0.00 0.00 4.40
1732 4320 4.012895 CCGCCAAGTGTCACGTGC 62.013 66.667 11.67 6.86 0.00 5.34
1733 4321 4.012895 GCCGCCAAGTGTCACGTG 62.013 66.667 9.94 9.94 0.00 4.49
1734 4322 4.235762 AGCCGCCAAGTGTCACGT 62.236 61.111 0.00 0.00 0.00 4.49
1735 4323 3.716006 CAGCCGCCAAGTGTCACG 61.716 66.667 0.00 0.00 0.00 4.35
1736 4324 4.030452 GCAGCCGCCAAGTGTCAC 62.030 66.667 0.00 0.00 0.00 3.67
1737 4325 4.254709 AGCAGCCGCCAAGTGTCA 62.255 61.111 0.00 0.00 39.83 3.58
1738 4326 3.730761 CAGCAGCCGCCAAGTGTC 61.731 66.667 0.00 0.00 39.83 3.67
1739 4327 4.254709 TCAGCAGCCGCCAAGTGT 62.255 61.111 0.00 0.00 39.83 3.55
1740 4328 3.429141 CTCAGCAGCCGCCAAGTG 61.429 66.667 0.00 0.00 39.83 3.16
1741 4329 3.602513 CTCTCAGCAGCCGCCAAGT 62.603 63.158 0.00 0.00 39.83 3.16
1742 4330 2.818714 CTCTCAGCAGCCGCCAAG 60.819 66.667 0.00 0.00 39.83 3.61
1750 4338 2.814341 CAGGTGCGCTCTCAGCAG 60.814 66.667 9.73 0.00 46.10 4.24
1778 4366 1.296002 AACTAAGGCCTACCCCTTGG 58.704 55.000 5.16 3.49 44.68 3.61
1779 4367 3.113043 ACTAACTAAGGCCTACCCCTTG 58.887 50.000 5.16 0.00 44.68 3.61
1780 4368 3.503773 ACTAACTAAGGCCTACCCCTT 57.496 47.619 5.16 0.00 46.58 3.95
1781 4369 3.503773 AACTAACTAAGGCCTACCCCT 57.496 47.619 5.16 0.00 36.11 4.79
1782 4370 4.293494 AGTAACTAACTAAGGCCTACCCC 58.707 47.826 5.16 0.00 36.36 4.95
1783 4371 4.343526 GGAGTAACTAACTAAGGCCTACCC 59.656 50.000 5.16 0.00 39.07 3.69
1784 4372 4.343526 GGGAGTAACTAACTAAGGCCTACC 59.656 50.000 5.16 0.00 39.07 3.18
1785 4373 4.343526 GGGGAGTAACTAACTAAGGCCTAC 59.656 50.000 5.16 0.00 39.07 3.18
1786 4374 4.550669 GGGGAGTAACTAACTAAGGCCTA 58.449 47.826 5.16 0.00 39.07 3.93
1787 4375 3.382278 GGGGAGTAACTAACTAAGGCCT 58.618 50.000 0.00 0.00 39.07 5.19
1788 4376 2.102084 CGGGGAGTAACTAACTAAGGCC 59.898 54.545 0.00 0.00 39.07 5.19
1789 4377 2.102084 CCGGGGAGTAACTAACTAAGGC 59.898 54.545 0.00 0.00 39.07 4.35
1790 4378 3.635591 TCCGGGGAGTAACTAACTAAGG 58.364 50.000 0.00 0.00 39.07 2.69
1791 4379 5.186603 ACTTTCCGGGGAGTAACTAACTAAG 59.813 44.000 0.00 0.00 39.07 2.18
1792 4380 5.086621 ACTTTCCGGGGAGTAACTAACTAA 58.913 41.667 0.00 0.00 39.07 2.24
1793 4381 4.677182 ACTTTCCGGGGAGTAACTAACTA 58.323 43.478 0.00 0.00 39.07 2.24
1794 4382 3.513119 GACTTTCCGGGGAGTAACTAACT 59.487 47.826 0.00 0.00 42.80 2.24
1795 4383 3.368843 GGACTTTCCGGGGAGTAACTAAC 60.369 52.174 0.00 0.00 0.00 2.34
1796 4384 2.833943 GGACTTTCCGGGGAGTAACTAA 59.166 50.000 0.00 0.00 0.00 2.24
1797 4385 2.043526 AGGACTTTCCGGGGAGTAACTA 59.956 50.000 0.00 0.00 42.75 2.24
1798 4386 1.203275 AGGACTTTCCGGGGAGTAACT 60.203 52.381 0.00 5.42 42.75 2.24
1799 4387 1.273759 AGGACTTTCCGGGGAGTAAC 58.726 55.000 0.00 3.16 42.75 2.50
1800 4388 2.925966 TAGGACTTTCCGGGGAGTAA 57.074 50.000 0.00 0.00 42.75 2.24
1801 4389 4.754411 ATATAGGACTTTCCGGGGAGTA 57.246 45.455 0.00 0.00 42.75 2.59
1802 4390 3.632420 ATATAGGACTTTCCGGGGAGT 57.368 47.619 0.00 5.90 42.75 3.85
1803 4391 6.212791 TCATTAATATAGGACTTTCCGGGGAG 59.787 42.308 0.00 2.02 42.75 4.30
1804 4392 6.013984 GTCATTAATATAGGACTTTCCGGGGA 60.014 42.308 0.00 0.00 42.75 4.81
1805 4393 6.171213 GTCATTAATATAGGACTTTCCGGGG 58.829 44.000 0.00 0.00 42.75 5.73
1806 4394 6.765403 TGTCATTAATATAGGACTTTCCGGG 58.235 40.000 0.00 0.00 42.75 5.73
1830 4418 7.679638 GCGTCTTGGTGAAATTTCATAGCTTAT 60.680 37.037 23.05 0.00 39.73 1.73
1832 4420 5.619981 GCGTCTTGGTGAAATTTCATAGCTT 60.620 40.000 23.05 0.00 39.73 3.74
1839 4427 3.964909 ACAAGCGTCTTGGTGAAATTTC 58.035 40.909 19.13 11.41 0.00 2.17
1844 4432 2.364324 ACTCTACAAGCGTCTTGGTGAA 59.636 45.455 19.13 5.71 0.00 3.18
1850 4438 4.924462 GCTTAAGAACTCTACAAGCGTCTT 59.076 41.667 6.67 0.00 35.70 3.01
1852 4440 3.613299 GGCTTAAGAACTCTACAAGCGTC 59.387 47.826 6.67 4.43 41.39 5.19
1859 4447 4.443621 GGACATGGGCTTAAGAACTCTAC 58.556 47.826 6.67 0.00 0.00 2.59
1871 4459 0.827507 AACAAAAGCGGACATGGGCT 60.828 50.000 0.00 0.00 42.33 5.19
1872 4460 0.033366 AAACAAAAGCGGACATGGGC 59.967 50.000 0.00 0.00 0.00 5.36
1873 4461 2.134346 CAAAACAAAAGCGGACATGGG 58.866 47.619 0.00 0.00 0.00 4.00
1876 4473 5.175127 AGAAAACAAAACAAAAGCGGACAT 58.825 33.333 0.00 0.00 0.00 3.06
1900 4497 8.946085 GGAAACAAGAAAAAGAAAGGAAAACAT 58.054 29.630 0.00 0.00 0.00 2.71
1902 4499 8.547967 AGGAAACAAGAAAAAGAAAGGAAAAC 57.452 30.769 0.00 0.00 0.00 2.43
1916 4519 6.275494 ACCGAAAGAAAAAGGAAACAAGAA 57.725 33.333 0.00 0.00 0.00 2.52
1923 4526 5.408880 AAACCAACCGAAAGAAAAAGGAA 57.591 34.783 0.00 0.00 0.00 3.36
1924 4527 5.186215 AGAAAACCAACCGAAAGAAAAAGGA 59.814 36.000 0.00 0.00 0.00 3.36
1925 4528 5.416083 AGAAAACCAACCGAAAGAAAAAGG 58.584 37.500 0.00 0.00 0.00 3.11
1926 4529 6.961359 AAGAAAACCAACCGAAAGAAAAAG 57.039 33.333 0.00 0.00 0.00 2.27
1927 4530 7.095144 GGAAAAGAAAACCAACCGAAAGAAAAA 60.095 33.333 0.00 0.00 0.00 1.94
1928 4531 6.369340 GGAAAAGAAAACCAACCGAAAGAAAA 59.631 34.615 0.00 0.00 0.00 2.29
1929 4532 5.870433 GGAAAAGAAAACCAACCGAAAGAAA 59.130 36.000 0.00 0.00 0.00 2.52
1930 4533 5.186215 AGGAAAAGAAAACCAACCGAAAGAA 59.814 36.000 0.00 0.00 0.00 2.52
1937 4540 6.041637 AGGACAATAGGAAAAGAAAACCAACC 59.958 38.462 0.00 0.00 0.00 3.77
1995 4599 9.639601 AAAAGGAAAGTAAAAGCAATAGCATAC 57.360 29.630 0.00 0.00 45.49 2.39
2000 4604 7.368059 ACGGAAAAGGAAAGTAAAAGCAATAG 58.632 34.615 0.00 0.00 0.00 1.73
2006 4610 9.049523 AGTAGTTACGGAAAAGGAAAGTAAAAG 57.950 33.333 0.00 0.00 0.00 2.27
2107 4718 7.227049 TCTTCCCCAATTTGTCTTTGTATTC 57.773 36.000 0.00 0.00 0.00 1.75
2119 4731 1.686115 CCGAGCCATCTTCCCCAATTT 60.686 52.381 0.00 0.00 0.00 1.82
2121 4733 1.533711 CCGAGCCATCTTCCCCAAT 59.466 57.895 0.00 0.00 0.00 3.16
2122 4734 2.998097 CCGAGCCATCTTCCCCAA 59.002 61.111 0.00 0.00 0.00 4.12
2123 4735 3.797353 GCCGAGCCATCTTCCCCA 61.797 66.667 0.00 0.00 0.00 4.96
2137 4750 0.523072 CATGAAGAGGTTGTTGGCCG 59.477 55.000 0.00 0.00 0.00 6.13
2152 4765 5.301298 ACATCTGAGTCGATGATCTTCATGA 59.699 40.000 22.99 0.00 42.63 3.07
2163 4776 4.013728 GGATAGCCTACATCTGAGTCGAT 58.986 47.826 0.00 0.00 0.00 3.59
2166 4779 5.621104 CGATTGGATAGCCTACATCTGAGTC 60.621 48.000 0.00 0.00 34.31 3.36
2167 4780 4.219507 CGATTGGATAGCCTACATCTGAGT 59.780 45.833 0.00 0.00 34.31 3.41
2171 4784 4.021894 GTGTCGATTGGATAGCCTACATCT 60.022 45.833 0.00 0.00 34.31 2.90
2176 4789 1.000607 GCGTGTCGATTGGATAGCCTA 60.001 52.381 0.00 0.00 34.31 3.93
2179 4792 1.548973 CGGCGTGTCGATTGGATAGC 61.549 60.000 0.00 0.00 0.00 2.97
2198 4811 3.521560 TCTTTAGTGATGATGGTGTCGC 58.478 45.455 0.00 0.00 0.00 5.19
2213 4826 7.426410 TCACTTCTAGCCGATGTTATCTTTAG 58.574 38.462 0.00 0.00 0.00 1.85
2216 4829 5.221342 CCTCACTTCTAGCCGATGTTATCTT 60.221 44.000 0.00 0.00 0.00 2.40
2220 4833 2.693591 CCCTCACTTCTAGCCGATGTTA 59.306 50.000 0.00 0.00 0.00 2.41
2228 4841 1.690985 AGGGGCCCTCACTTCTAGC 60.691 63.158 22.67 0.00 0.00 3.42
2238 4851 0.695803 CATTACAGAGGAGGGGCCCT 60.696 60.000 29.30 29.30 39.77 5.19
2239 4852 1.709994 CCATTACAGAGGAGGGGCCC 61.710 65.000 17.12 17.12 37.37 5.80
2253 4866 8.988060 TGGTTCTAAAGATGATCTGTACCATTA 58.012 33.333 2.30 0.00 0.00 1.90
2261 4874 5.009410 GGCCAATGGTTCTAAAGATGATCTG 59.991 44.000 0.00 0.00 0.00 2.90
2262 4875 5.136105 GGCCAATGGTTCTAAAGATGATCT 58.864 41.667 0.00 0.00 0.00 2.75
2265 4878 4.314522 TGGCCAATGGTTCTAAAGATGA 57.685 40.909 0.61 0.00 0.00 2.92
2268 4881 4.220382 CACAATGGCCAATGGTTCTAAAGA 59.780 41.667 24.49 0.00 0.00 2.52
2273 4886 2.014010 ACACAATGGCCAATGGTTCT 57.986 45.000 24.49 0.40 0.00 3.01
2298 4911 0.533085 TTGTCCACGATGCCAAACGA 60.533 50.000 0.00 0.00 0.00 3.85
2300 4913 2.500509 TTTTGTCCACGATGCCAAAC 57.499 45.000 0.00 0.00 0.00 2.93
2302 4915 1.339610 CCTTTTTGTCCACGATGCCAA 59.660 47.619 0.00 0.00 0.00 4.52
2310 4923 8.282592 GCTGAAAATTATTTCCTTTTTGTCCAC 58.717 33.333 0.00 0.00 43.54 4.02
2313 4926 8.376889 TGGCTGAAAATTATTTCCTTTTTGTC 57.623 30.769 0.00 0.00 43.54 3.18
2352 4965 8.512138 CCGTTTTAATTGGATGGGTTAGATATC 58.488 37.037 0.00 0.00 0.00 1.63
2356 4969 5.416326 CACCGTTTTAATTGGATGGGTTAGA 59.584 40.000 0.00 0.00 0.00 2.10
2360 4973 3.502356 ACACCGTTTTAATTGGATGGGT 58.498 40.909 0.00 0.00 0.00 4.51
2363 4976 5.963004 CGACATACACCGTTTTAATTGGATG 59.037 40.000 0.00 0.00 36.51 3.51
2372 4985 7.008266 CGTATAGTTTACGACATACACCGTTTT 59.992 37.037 7.29 0.00 42.94 2.43
2387 5000 5.876460 ACCATCACCAAACCGTATAGTTTAC 59.124 40.000 0.00 0.00 37.87 2.01
2397 5010 0.948678 AAACGACCATCACCAAACCG 59.051 50.000 0.00 0.00 0.00 4.44
2475 5088 5.358725 GGTTTCTTAATAAAATCAGGGGCGA 59.641 40.000 0.00 0.00 0.00 5.54
2476 5089 5.588240 GGTTTCTTAATAAAATCAGGGGCG 58.412 41.667 0.00 0.00 0.00 6.13
2477 5090 5.358725 TCGGTTTCTTAATAAAATCAGGGGC 59.641 40.000 0.00 0.00 0.00 5.80
2478 5091 7.284489 TCATCGGTTTCTTAATAAAATCAGGGG 59.716 37.037 0.00 0.00 0.00 4.79
2479 5092 8.129211 GTCATCGGTTTCTTAATAAAATCAGGG 58.871 37.037 0.00 0.00 0.00 4.45
2480 5093 8.673711 TGTCATCGGTTTCTTAATAAAATCAGG 58.326 33.333 0.00 0.00 0.00 3.86
2481 5094 9.490663 GTGTCATCGGTTTCTTAATAAAATCAG 57.509 33.333 0.00 0.00 0.00 2.90
2482 5095 9.004717 TGTGTCATCGGTTTCTTAATAAAATCA 57.995 29.630 0.00 0.00 0.00 2.57
2484 5097 9.787532 CATGTGTCATCGGTTTCTTAATAAAAT 57.212 29.630 0.00 0.00 0.00 1.82
2485 5098 9.004717 TCATGTGTCATCGGTTTCTTAATAAAA 57.995 29.630 0.00 0.00 0.00 1.52
2486 5099 8.447833 GTCATGTGTCATCGGTTTCTTAATAAA 58.552 33.333 0.00 0.00 0.00 1.40
2487 5100 7.065324 GGTCATGTGTCATCGGTTTCTTAATAA 59.935 37.037 0.00 0.00 0.00 1.40
2488 5101 6.537301 GGTCATGTGTCATCGGTTTCTTAATA 59.463 38.462 0.00 0.00 0.00 0.98
2489 5102 5.354234 GGTCATGTGTCATCGGTTTCTTAAT 59.646 40.000 0.00 0.00 0.00 1.40
2490 5103 4.693566 GGTCATGTGTCATCGGTTTCTTAA 59.306 41.667 0.00 0.00 0.00 1.85
2491 5104 4.250464 GGTCATGTGTCATCGGTTTCTTA 58.750 43.478 0.00 0.00 0.00 2.10
2492 5105 3.074412 GGTCATGTGTCATCGGTTTCTT 58.926 45.455 0.00 0.00 0.00 2.52
2493 5106 2.615493 GGGTCATGTGTCATCGGTTTCT 60.615 50.000 0.00 0.00 0.00 2.52
2494 5107 1.737793 GGGTCATGTGTCATCGGTTTC 59.262 52.381 0.00 0.00 0.00 2.78
2495 5108 1.073125 TGGGTCATGTGTCATCGGTTT 59.927 47.619 0.00 0.00 0.00 3.27
2496 5109 0.690192 TGGGTCATGTGTCATCGGTT 59.310 50.000 0.00 0.00 0.00 4.44
2497 5110 0.250234 CTGGGTCATGTGTCATCGGT 59.750 55.000 0.00 0.00 0.00 4.69
2498 5111 3.070076 CTGGGTCATGTGTCATCGG 57.930 57.895 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.