Multiple sequence alignment - TraesCS1D01G025800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G025800 chr1D 100.000 3226 0 0 1 3226 10625137 10628362 0.000000e+00 5958.0
1 TraesCS1D01G025800 chr1D 77.583 1142 242 14 625 1758 10602630 10603765 0.000000e+00 678.0
2 TraesCS1D01G025800 chr1D 77.273 1166 229 29 710 1859 10515963 10517108 0.000000e+00 652.0
3 TraesCS1D01G025800 chr1D 75.500 1200 253 32 629 1813 10593233 10594406 1.690000e-152 549.0
4 TraesCS1D01G025800 chr1D 80.119 674 123 11 1084 1751 10647606 10648274 2.890000e-135 492.0
5 TraesCS1D01G025800 chr1B 87.311 993 100 10 625 1615 16133851 16132883 0.000000e+00 1112.0
6 TraesCS1D01G025800 chr1B 79.739 765 140 13 1002 1760 15712978 15713733 1.020000e-149 540.0
7 TraesCS1D01G025800 chr1B 87.838 74 9 0 3145 3218 16125272 16125199 1.590000e-13 87.9
8 TraesCS1D01G025800 chr1B 93.878 49 2 1 3151 3199 15880256 15880209 4.460000e-09 73.1
9 TraesCS1D01G025800 chr3D 95.761 637 26 1 1 637 563323322 563322687 0.000000e+00 1026.0
10 TraesCS1D01G025800 chr3D 93.897 639 35 3 1 638 393228124 393227489 0.000000e+00 961.0
11 TraesCS1D01G025800 chr7D 96.198 526 19 1 113 638 19048245 19048769 0.000000e+00 859.0
12 TraesCS1D01G025800 chr7D 96.429 504 17 1 134 637 487015358 487015860 0.000000e+00 830.0
13 TraesCS1D01G025800 chr2D 91.922 619 25 6 1 619 34326467 34327060 0.000000e+00 843.0
14 TraesCS1D01G025800 chr2D 94.106 526 28 3 1 525 23224546 23225069 0.000000e+00 797.0
15 TraesCS1D01G025800 chr2D 91.494 482 17 7 178 637 400288436 400288915 2.710000e-180 641.0
16 TraesCS1D01G025800 chr2D 97.076 171 5 0 467 637 642367029 642367199 4.070000e-74 289.0
17 TraesCS1D01G025800 chr6D 95.202 521 24 1 1 521 38821562 38821043 0.000000e+00 822.0
18 TraesCS1D01G025800 chr6D 95.202 521 23 2 1 521 456706149 456706667 0.000000e+00 822.0
19 TraesCS1D01G025800 chr6D 92.424 462 24 3 177 638 6992373 6991923 0.000000e+00 649.0
20 TraesCS1D01G025800 chr4D 94.818 521 25 2 1 521 506122747 506122229 0.000000e+00 811.0
21 TraesCS1D01G025800 chr1A 77.735 1289 249 26 625 1896 12254532 12255799 0.000000e+00 756.0
22 TraesCS1D01G025800 chr1A 78.079 1145 228 23 625 1756 12196546 12197680 0.000000e+00 702.0
23 TraesCS1D01G025800 chr1A 77.277 1131 243 14 633 1758 12267672 12268793 0.000000e+00 652.0
24 TraesCS1D01G025800 chr1A 78.723 611 119 7 1155 1756 12301250 12301858 6.480000e-107 398.0
25 TraesCS1D01G025800 chr1A 84.722 216 24 7 2999 3209 12261238 12261449 1.170000e-49 207.0
26 TraesCS1D01G025800 chr1A 83.744 203 30 3 2999 3199 12508682 12508481 4.250000e-44 189.0
27 TraesCS1D01G025800 chr1A 81.500 200 36 1 625 823 12300747 12300946 2.580000e-36 163.0
28 TraesCS1D01G025800 chr1A 96.512 86 3 0 2695 2780 12259325 12259410 3.350000e-30 143.0
29 TraesCS1D01G025800 chr1A 88.312 77 9 0 3142 3218 12200271 12200347 3.430000e-15 93.5
30 TraesCS1D01G025800 chr5D 89.764 381 29 1 258 638 482641876 482642246 2.250000e-131 479.0
31 TraesCS1D01G025800 chr5A 89.427 227 24 0 411 637 619216426 619216200 1.460000e-73 287.0
32 TraesCS1D01G025800 chr5B 73.121 346 79 12 1198 1536 532109879 532110217 9.460000e-21 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G025800 chr1D 10625137 10628362 3225 False 5958.000000 5958 100.0000 1 3226 1 chr1D.!!$F4 3225
1 TraesCS1D01G025800 chr1D 10602630 10603765 1135 False 678.000000 678 77.5830 625 1758 1 chr1D.!!$F3 1133
2 TraesCS1D01G025800 chr1D 10515963 10517108 1145 False 652.000000 652 77.2730 710 1859 1 chr1D.!!$F1 1149
3 TraesCS1D01G025800 chr1D 10593233 10594406 1173 False 549.000000 549 75.5000 629 1813 1 chr1D.!!$F2 1184
4 TraesCS1D01G025800 chr1D 10647606 10648274 668 False 492.000000 492 80.1190 1084 1751 1 chr1D.!!$F5 667
5 TraesCS1D01G025800 chr1B 16132883 16133851 968 True 1112.000000 1112 87.3110 625 1615 1 chr1B.!!$R3 990
6 TraesCS1D01G025800 chr1B 15712978 15713733 755 False 540.000000 540 79.7390 1002 1760 1 chr1B.!!$F1 758
7 TraesCS1D01G025800 chr3D 563322687 563323322 635 True 1026.000000 1026 95.7610 1 637 1 chr3D.!!$R2 636
8 TraesCS1D01G025800 chr3D 393227489 393228124 635 True 961.000000 961 93.8970 1 638 1 chr3D.!!$R1 637
9 TraesCS1D01G025800 chr7D 19048245 19048769 524 False 859.000000 859 96.1980 113 638 1 chr7D.!!$F1 525
10 TraesCS1D01G025800 chr7D 487015358 487015860 502 False 830.000000 830 96.4290 134 637 1 chr7D.!!$F2 503
11 TraesCS1D01G025800 chr2D 34326467 34327060 593 False 843.000000 843 91.9220 1 619 1 chr2D.!!$F2 618
12 TraesCS1D01G025800 chr2D 23224546 23225069 523 False 797.000000 797 94.1060 1 525 1 chr2D.!!$F1 524
13 TraesCS1D01G025800 chr6D 38821043 38821562 519 True 822.000000 822 95.2020 1 521 1 chr6D.!!$R2 520
14 TraesCS1D01G025800 chr6D 456706149 456706667 518 False 822.000000 822 95.2020 1 521 1 chr6D.!!$F1 520
15 TraesCS1D01G025800 chr4D 506122229 506122747 518 True 811.000000 811 94.8180 1 521 1 chr4D.!!$R1 520
16 TraesCS1D01G025800 chr1A 12267672 12268793 1121 False 652.000000 652 77.2770 633 1758 1 chr1A.!!$F1 1125
17 TraesCS1D01G025800 chr1A 12196546 12200347 3801 False 397.750000 702 83.1955 625 3218 2 chr1A.!!$F2 2593
18 TraesCS1D01G025800 chr1A 12254532 12261449 6917 False 368.666667 756 86.3230 625 3209 3 chr1A.!!$F3 2584
19 TraesCS1D01G025800 chr1A 12300747 12301858 1111 False 280.500000 398 80.1115 625 1756 2 chr1A.!!$F4 1131

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
168 169 0.865769 GGTGCGTCCAGTTTGTACAG 59.134 55.0 0.0 0.0 35.97 2.74 F
1685 1753 0.743097 GATGATTGCCCAACTGCTCC 59.257 55.0 0.0 0.0 0.00 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1942 2040 0.037882 CGATCGGACTGCAGGCATAT 60.038 55.0 23.90 14.08 0.00 1.78 R
2562 5096 0.392060 TCGCGAGGTACACTCTGCTA 60.392 55.0 3.71 9.87 44.33 3.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
102 103 3.056821 CCCGTGTAACAGATGAGTTCTCA 60.057 47.826 4.96 4.96 35.74 3.27
122 123 6.190587 TCTCATCTGAAACTCTGATACTCCA 58.809 40.000 0.00 0.00 34.01 3.86
144 145 6.831353 TCCAAAAGAGATTGTCCAGTTTGTAA 59.169 34.615 0.00 0.00 0.00 2.41
168 169 0.865769 GGTGCGTCCAGTTTGTACAG 59.134 55.000 0.00 0.00 35.97 2.74
256 258 6.103997 TCAATATGAGTCCTCAACGGTTTAC 58.896 40.000 0.37 0.00 43.58 2.01
291 293 7.391148 AGACTAATATTGCGACCACAAATTT 57.609 32.000 0.00 0.00 32.27 1.82
300 302 6.073327 TGCGACCACAAATTTTACACATAA 57.927 33.333 0.00 0.00 0.00 1.90
303 305 6.399564 GCGACCACAAATTTTACACATAAAGC 60.400 38.462 0.00 0.00 31.90 3.51
305 307 8.018520 CGACCACAAATTTTACACATAAAGCTA 58.981 33.333 0.00 0.00 31.90 3.32
346 348 7.959651 GCTTGTGATAGTTTGAGAAGTAACATG 59.040 37.037 0.00 0.00 29.66 3.21
691 694 5.510179 CCTTCATGTTGCCATTGAGAAAAGT 60.510 40.000 0.00 0.00 0.00 2.66
725 728 2.293399 GTCTCCTTTGTTTGCCGAACAT 59.707 45.455 0.00 0.00 46.99 2.71
736 739 5.918011 TGTTTGCCGAACATCATCTTTAAAC 59.082 36.000 0.00 0.00 43.13 2.01
789 792 4.361451 ACACTGCATTACATTTAGCTGC 57.639 40.909 0.00 0.00 0.00 5.25
811 814 2.821810 GCTCAGAAGCTTCGGGCC 60.822 66.667 23.92 13.92 45.55 5.80
847 850 3.252400 TGCAAACAAGAAAGTGCACTTG 58.748 40.909 31.73 22.06 41.85 3.16
884 887 9.793259 ATAACAAAAAGAAGACTCCTGTTGATA 57.207 29.630 0.00 0.00 0.00 2.15
921 924 4.594123 TTCCTCGCGGAATGTATTATCA 57.406 40.909 6.13 0.00 44.28 2.15
929 932 5.063438 CGCGGAATGTATTATCATTGGGTAG 59.937 44.000 0.00 0.00 38.03 3.18
944 957 6.601613 TCATTGGGTAGCATACTTTTACCTTG 59.398 38.462 0.00 0.00 42.51 3.61
948 961 6.880529 TGGGTAGCATACTTTTACCTTGTTAC 59.119 38.462 0.00 0.00 42.51 2.50
961 974 9.806203 TTTTACCTTGTTACTTTTTAAGGCTTC 57.194 29.630 1.30 0.00 42.66 3.86
975 989 1.646189 GGCTTCGCCTCTTCAACTAG 58.354 55.000 0.00 0.00 46.69 2.57
988 1003 7.182761 CCTCTTCAACTAGCACAAATTTATCG 58.817 38.462 0.00 0.00 0.00 2.92
994 1049 4.881273 ACTAGCACAAATTTATCGATGGCA 59.119 37.500 8.54 0.00 0.00 4.92
1012 1067 6.816140 CGATGGCATGTACACATATATGGTAA 59.184 38.462 16.96 7.71 34.26 2.85
1054 1112 1.267806 CAAAACAGCGACAGCCTGATT 59.732 47.619 0.00 0.00 46.67 2.57
1061 1119 1.511850 CGACAGCCTGATTCACAACA 58.488 50.000 0.00 0.00 0.00 3.33
1141 1202 8.312669 AGAAGGATAGATACAAACTAACAGCT 57.687 34.615 0.00 0.00 0.00 4.24
1152 1213 6.322491 ACAAACTAACAGCTGAAGAAACAAC 58.678 36.000 23.35 0.00 0.00 3.32
1225 1286 4.083537 TCAGTTTTAATAGCAACTGTGGCG 60.084 41.667 14.42 0.00 46.76 5.69
1416 1477 2.093890 CATGCATAACTTGGTGAGCCA 58.906 47.619 0.00 0.00 44.38 4.75
1439 1500 2.009042 GCATGTACTTGAGCGCCTCTT 61.009 52.381 12.65 0.00 0.00 2.85
1637 1705 4.617530 CGTTATATGTACGGATGGGACCAG 60.618 50.000 0.00 0.00 35.47 4.00
1647 1715 2.046217 GGGACCAGTTCGGGCTTC 60.046 66.667 0.00 0.00 45.62 3.86
1665 1733 4.229876 GCTTCAAAGTGGTTAGCAATGAC 58.770 43.478 0.00 0.00 0.00 3.06
1670 1738 3.610040 AGTGGTTAGCAATGACGATGA 57.390 42.857 0.00 0.00 0.00 2.92
1685 1753 0.743097 GATGATTGCCCAACTGCTCC 59.257 55.000 0.00 0.00 0.00 4.70
1762 1833 2.417379 CCGGAACCACTGATGACTACAG 60.417 54.545 0.00 0.00 40.68 2.74
1771 1842 5.906113 ACTGATGACTACAGTGTAGAAGG 57.094 43.478 32.15 18.05 45.19 3.46
1799 1870 7.175467 TCAAACATGTGATGAGCTAGAACAAAT 59.825 33.333 0.00 0.00 0.00 2.32
1803 1874 7.338703 ACATGTGATGAGCTAGAACAAATGAAT 59.661 33.333 15.13 0.00 32.55 2.57
1805 1876 6.094464 TGTGATGAGCTAGAACAAATGAATGG 59.906 38.462 0.00 0.00 0.00 3.16
1806 1877 6.317140 GTGATGAGCTAGAACAAATGAATGGA 59.683 38.462 0.00 0.00 0.00 3.41
1807 1878 7.013083 GTGATGAGCTAGAACAAATGAATGGAT 59.987 37.037 0.00 0.00 0.00 3.41
1808 1879 6.932356 TGAGCTAGAACAAATGAATGGATC 57.068 37.500 0.00 0.00 0.00 3.36
1810 1881 6.541278 TGAGCTAGAACAAATGAATGGATCTG 59.459 38.462 0.00 0.00 0.00 2.90
1812 1883 6.888632 AGCTAGAACAAATGAATGGATCTGTT 59.111 34.615 0.00 0.00 29.45 3.16
1813 1884 8.049117 AGCTAGAACAAATGAATGGATCTGTTA 58.951 33.333 0.00 0.00 27.61 2.41
1814 1885 8.677300 GCTAGAACAAATGAATGGATCTGTTAA 58.323 33.333 0.00 0.00 27.61 2.01
1829 1902 9.166173 TGGATCTGTTAAGATTTGTGACTAATG 57.834 33.333 0.00 0.00 43.48 1.90
1834 1907 7.802738 TGTTAAGATTTGTGACTAATGGTTCG 58.197 34.615 0.00 0.00 0.00 3.95
1838 1911 5.995282 AGATTTGTGACTAATGGTTCGTCAA 59.005 36.000 0.00 0.00 39.16 3.18
1849 1922 4.153958 TGGTTCGTCAACATATGTTTGC 57.846 40.909 18.50 12.60 35.83 3.68
1870 1943 9.542462 GTTTGCTCAGAACCTATATATGTTACA 57.458 33.333 3.68 0.00 0.00 2.41
1887 1962 9.730420 ATATGTTACAGAAGTTTGTGTTTGTTC 57.270 29.630 0.00 0.00 36.06 3.18
1892 1967 5.476945 ACAGAAGTTTGTGTTTGTTCTTCCT 59.523 36.000 0.00 0.00 29.44 3.36
1909 2007 4.101898 TCTTCCTGGTACTTGTGCTTGTAA 59.898 41.667 0.00 0.00 0.00 2.41
1916 2014 7.604927 CCTGGTACTTGTGCTTGTAATAAGTAA 59.395 37.037 0.00 0.00 36.10 2.24
1920 2018 9.590088 GTACTTGTGCTTGTAATAAGTAAACAC 57.410 33.333 0.00 0.00 36.10 3.32
1921 2019 7.645402 ACTTGTGCTTGTAATAAGTAAACACC 58.355 34.615 0.00 0.00 30.45 4.16
1922 2020 7.283580 ACTTGTGCTTGTAATAAGTAAACACCA 59.716 33.333 0.00 0.00 30.45 4.17
1926 2024 8.911662 GTGCTTGTAATAAGTAAACACCATTTG 58.088 33.333 0.00 0.00 0.00 2.32
1927 2025 7.596995 TGCTTGTAATAAGTAAACACCATTTGC 59.403 33.333 0.00 0.00 0.00 3.68
1938 2036 6.816134 AAACACCATTTGCCATATTTTTCC 57.184 33.333 0.00 0.00 0.00 3.13
1941 2039 7.436320 ACACCATTTGCCATATTTTTCCTAT 57.564 32.000 0.00 0.00 0.00 2.57
1942 2040 8.546083 ACACCATTTGCCATATTTTTCCTATA 57.454 30.769 0.00 0.00 0.00 1.31
1943 2041 9.158097 ACACCATTTGCCATATTTTTCCTATAT 57.842 29.630 0.00 0.00 0.00 0.86
1949 2047 9.545928 TTTGCCATATTTTTCCTATATATGCCT 57.454 29.630 0.00 0.00 33.12 4.75
1950 2048 8.523915 TGCCATATTTTTCCTATATATGCCTG 57.476 34.615 0.00 0.00 33.12 4.85
1951 2049 7.068593 TGCCATATTTTTCCTATATATGCCTGC 59.931 37.037 0.00 0.00 33.12 4.85
1952 2050 7.068593 GCCATATTTTTCCTATATATGCCTGCA 59.931 37.037 0.00 0.00 33.12 4.41
1953 2051 8.627403 CCATATTTTTCCTATATATGCCTGCAG 58.373 37.037 6.78 6.78 33.12 4.41
1954 2052 9.182214 CATATTTTTCCTATATATGCCTGCAGT 57.818 33.333 13.81 0.00 0.00 4.40
1955 2053 7.693969 ATTTTTCCTATATATGCCTGCAGTC 57.306 36.000 13.81 0.00 0.00 3.51
1956 2054 4.826274 TTCCTATATATGCCTGCAGTCC 57.174 45.455 13.81 3.71 0.00 3.85
1957 2055 2.760650 TCCTATATATGCCTGCAGTCCG 59.239 50.000 13.81 0.00 0.00 4.79
1958 2056 2.760650 CCTATATATGCCTGCAGTCCGA 59.239 50.000 13.81 0.00 0.00 4.55
1959 2057 3.386078 CCTATATATGCCTGCAGTCCGAT 59.614 47.826 13.81 3.44 0.00 4.18
1960 2058 3.533606 ATATATGCCTGCAGTCCGATC 57.466 47.619 13.81 0.00 0.00 3.69
1961 2059 0.037882 ATATGCCTGCAGTCCGATCG 60.038 55.000 13.81 8.51 0.00 3.69
1962 2060 1.106944 TATGCCTGCAGTCCGATCGA 61.107 55.000 18.66 0.00 0.00 3.59
1963 2061 1.960040 ATGCCTGCAGTCCGATCGAA 61.960 55.000 18.66 0.00 0.00 3.71
1964 2062 1.227380 GCCTGCAGTCCGATCGAAT 60.227 57.895 18.66 0.00 0.00 3.34
1965 2063 1.493950 GCCTGCAGTCCGATCGAATG 61.494 60.000 18.66 13.03 39.62 2.67
1966 2064 0.877649 CCTGCAGTCCGATCGAATGG 60.878 60.000 18.66 4.55 37.05 3.16
1967 2065 0.179100 CTGCAGTCCGATCGAATGGT 60.179 55.000 18.66 0.00 37.05 3.55
1968 2066 0.249120 TGCAGTCCGATCGAATGGTT 59.751 50.000 18.66 0.00 37.05 3.67
1969 2067 1.478916 TGCAGTCCGATCGAATGGTTA 59.521 47.619 18.66 0.00 37.05 2.85
1970 2068 2.102420 TGCAGTCCGATCGAATGGTTAT 59.898 45.455 18.66 0.00 37.05 1.89
1971 2069 2.476619 GCAGTCCGATCGAATGGTTATG 59.523 50.000 18.66 4.84 37.05 1.90
1972 2070 3.717707 CAGTCCGATCGAATGGTTATGT 58.282 45.455 18.66 0.00 32.83 2.29
1973 2071 4.119862 CAGTCCGATCGAATGGTTATGTT 58.880 43.478 18.66 0.00 32.83 2.71
1974 2072 4.025730 CAGTCCGATCGAATGGTTATGTTG 60.026 45.833 18.66 0.00 32.83 3.33
1975 2073 3.869246 GTCCGATCGAATGGTTATGTTGT 59.131 43.478 18.66 0.00 0.00 3.32
1976 2074 4.025979 GTCCGATCGAATGGTTATGTTGTC 60.026 45.833 18.66 0.00 0.00 3.18
1977 2075 3.060540 CCGATCGAATGGTTATGTTGTCG 60.061 47.826 18.66 0.00 0.00 4.35
1978 2076 3.794564 CGATCGAATGGTTATGTTGTCGA 59.205 43.478 10.26 0.00 41.24 4.20
1979 2077 4.317139 CGATCGAATGGTTATGTTGTCGAC 60.317 45.833 10.26 9.11 39.98 4.20
1980 2078 2.918600 TCGAATGGTTATGTTGTCGACG 59.081 45.455 11.62 0.00 32.98 5.12
1981 2079 2.664568 CGAATGGTTATGTTGTCGACGT 59.335 45.455 11.62 0.00 0.00 4.34
1982 2080 3.241552 CGAATGGTTATGTTGTCGACGTC 60.242 47.826 11.62 5.18 0.00 4.34
1983 2081 3.587797 ATGGTTATGTTGTCGACGTCT 57.412 42.857 14.70 0.00 0.00 4.18
1984 2082 2.668250 TGGTTATGTTGTCGACGTCTG 58.332 47.619 14.70 7.51 0.00 3.51
1985 2083 2.034939 TGGTTATGTTGTCGACGTCTGT 59.965 45.455 14.70 0.00 0.00 3.41
1986 2084 2.407361 GGTTATGTTGTCGACGTCTGTG 59.593 50.000 14.70 0.00 0.00 3.66
1987 2085 1.693467 TATGTTGTCGACGTCTGTGC 58.307 50.000 14.70 1.50 0.00 4.57
1994 2092 0.179121 TCGACGTCTGTGCACAAAGT 60.179 50.000 21.98 19.49 0.00 2.66
2014 2112 4.016444 AGTATGGACGGTTGAATTTGCAT 58.984 39.130 0.00 0.00 0.00 3.96
2025 2123 5.237048 GTTGAATTTGCATGGTGTGGTATT 58.763 37.500 0.00 0.00 0.00 1.89
2026 2124 4.818642 TGAATTTGCATGGTGTGGTATTG 58.181 39.130 0.00 0.00 0.00 1.90
2028 2126 3.657015 TTTGCATGGTGTGGTATTGTG 57.343 42.857 0.00 0.00 0.00 3.33
2031 2129 2.158559 GCATGGTGTGGTATTGTGTCA 58.841 47.619 0.00 0.00 0.00 3.58
2033 2131 3.181497 GCATGGTGTGGTATTGTGTCATC 60.181 47.826 0.00 0.00 0.00 2.92
2034 2132 4.264253 CATGGTGTGGTATTGTGTCATCT 58.736 43.478 0.00 0.00 0.00 2.90
2035 2133 3.673902 TGGTGTGGTATTGTGTCATCTG 58.326 45.455 0.00 0.00 0.00 2.90
2038 2136 4.314961 GTGTGGTATTGTGTCATCTGTCA 58.685 43.478 0.00 0.00 0.00 3.58
2039 2137 4.937620 GTGTGGTATTGTGTCATCTGTCAT 59.062 41.667 0.00 0.00 0.00 3.06
2040 2138 4.937015 TGTGGTATTGTGTCATCTGTCATG 59.063 41.667 0.00 0.00 0.00 3.07
2041 2139 5.178061 GTGGTATTGTGTCATCTGTCATGA 58.822 41.667 0.00 0.00 0.00 3.07
2042 2140 5.643348 GTGGTATTGTGTCATCTGTCATGAA 59.357 40.000 0.00 0.00 0.00 2.57
2043 2141 6.317140 GTGGTATTGTGTCATCTGTCATGAAT 59.683 38.462 0.00 0.00 0.00 2.57
2044 2142 7.495606 GTGGTATTGTGTCATCTGTCATGAATA 59.504 37.037 0.00 0.00 0.00 1.75
2045 2143 7.495606 TGGTATTGTGTCATCTGTCATGAATAC 59.504 37.037 0.00 0.00 0.00 1.89
2046 2144 7.495606 GGTATTGTGTCATCTGTCATGAATACA 59.504 37.037 0.00 0.00 31.33 2.29
2048 2146 7.926674 TTGTGTCATCTGTCATGAATACATT 57.073 32.000 0.00 0.00 34.15 2.71
2049 2147 9.617523 ATTGTGTCATCTGTCATGAATACATTA 57.382 29.630 0.00 0.00 34.15 1.90
2050 2148 9.447157 TTGTGTCATCTGTCATGAATACATTAA 57.553 29.630 0.00 0.00 34.15 1.40
2051 2149 8.882736 TGTGTCATCTGTCATGAATACATTAAC 58.117 33.333 0.00 0.00 34.15 2.01
2054 2152 8.554528 GTCATCTGTCATGAATACATTAACCAG 58.445 37.037 0.00 0.00 34.15 4.00
2055 2153 8.267183 TCATCTGTCATGAATACATTAACCAGT 58.733 33.333 0.00 0.00 34.15 4.00
2056 2154 8.896744 CATCTGTCATGAATACATTAACCAGTT 58.103 33.333 0.00 0.00 34.15 3.16
2057 2155 8.862325 TCTGTCATGAATACATTAACCAGTTT 57.138 30.769 0.00 0.00 34.15 2.66
2067 2210 9.569122 AATACATTAACCAGTTTGTAAGTCTGT 57.431 29.630 0.56 0.00 0.00 3.41
2076 2219 9.185680 ACCAGTTTGTAAGTCTGTTTTTAAGAT 57.814 29.630 0.00 0.00 0.00 2.40
2112 2255 5.536260 ACTCGACTTCTTACTTGGGTTTAC 58.464 41.667 0.00 0.00 0.00 2.01
2113 2256 4.549458 TCGACTTCTTACTTGGGTTTACG 58.451 43.478 0.00 0.00 0.00 3.18
2114 2257 3.122445 CGACTTCTTACTTGGGTTTACGC 59.878 47.826 0.00 0.00 0.00 4.42
2120 2263 4.822896 TCTTACTTGGGTTTACGCACAAAT 59.177 37.500 0.00 0.00 38.58 2.32
2121 2264 3.363341 ACTTGGGTTTACGCACAAATG 57.637 42.857 0.00 0.00 38.58 2.32
2125 2268 3.707793 TGGGTTTACGCACAAATGAAAC 58.292 40.909 0.00 0.00 33.68 2.78
2126 2269 2.722116 GGGTTTACGCACAAATGAAACG 59.278 45.455 0.00 0.00 32.08 3.60
2129 2277 4.609708 GGTTTACGCACAAATGAAACGTAG 59.390 41.667 0.00 0.00 39.97 3.51
2130 2278 5.433855 GTTTACGCACAAATGAAACGTAGA 58.566 37.500 0.00 0.00 39.97 2.59
2132 2280 4.065423 ACGCACAAATGAAACGTAGATG 57.935 40.909 0.00 0.00 34.79 2.90
2135 2283 5.177881 ACGCACAAATGAAACGTAGATGTAA 59.822 36.000 0.00 0.00 34.79 2.41
2140 2288 8.443160 CACAAATGAAACGTAGATGTAACTCAT 58.557 33.333 0.00 0.00 39.77 2.90
2141 2289 9.647797 ACAAATGAAACGTAGATGTAACTCATA 57.352 29.630 0.00 0.00 36.83 2.15
2157 2305 4.679373 CTCATAGCTGAGTATTGTGGGT 57.321 45.455 0.00 0.00 43.35 4.51
2160 2308 4.225042 TCATAGCTGAGTATTGTGGGTTGT 59.775 41.667 0.00 0.00 0.00 3.32
2161 2309 2.783135 AGCTGAGTATTGTGGGTTGTG 58.217 47.619 0.00 0.00 0.00 3.33
2162 2310 2.106511 AGCTGAGTATTGTGGGTTGTGT 59.893 45.455 0.00 0.00 0.00 3.72
2164 2312 3.304659 GCTGAGTATTGTGGGTTGTGTTG 60.305 47.826 0.00 0.00 0.00 3.33
2165 2313 3.882888 CTGAGTATTGTGGGTTGTGTTGT 59.117 43.478 0.00 0.00 0.00 3.32
2166 2314 3.629855 TGAGTATTGTGGGTTGTGTTGTG 59.370 43.478 0.00 0.00 0.00 3.33
2167 2315 3.626930 AGTATTGTGGGTTGTGTTGTGT 58.373 40.909 0.00 0.00 0.00 3.72
2168 2316 4.020543 AGTATTGTGGGTTGTGTTGTGTT 58.979 39.130 0.00 0.00 0.00 3.32
2169 2317 3.518634 ATTGTGGGTTGTGTTGTGTTC 57.481 42.857 0.00 0.00 0.00 3.18
2170 2318 1.911057 TGTGGGTTGTGTTGTGTTCA 58.089 45.000 0.00 0.00 0.00 3.18
2172 2320 2.165234 TGTGGGTTGTGTTGTGTTCATG 59.835 45.455 0.00 0.00 0.00 3.07
2174 2322 2.828520 TGGGTTGTGTTGTGTTCATGTT 59.171 40.909 0.00 0.00 0.00 2.71
2175 2323 3.186119 GGGTTGTGTTGTGTTCATGTTG 58.814 45.455 0.00 0.00 0.00 3.33
2180 2332 3.130164 TGTGTTGTGTTCATGTTGGAAGG 59.870 43.478 0.00 0.00 0.00 3.46
2192 2344 3.292460 TGTTGGAAGGAAACCACGAATT 58.708 40.909 0.00 0.00 37.13 2.17
2193 2345 4.462133 TGTTGGAAGGAAACCACGAATTA 58.538 39.130 0.00 0.00 37.13 1.40
2194 2346 4.888239 TGTTGGAAGGAAACCACGAATTAA 59.112 37.500 0.00 0.00 37.13 1.40
2195 2347 5.536916 TGTTGGAAGGAAACCACGAATTAAT 59.463 36.000 0.00 0.00 37.13 1.40
2196 2348 6.715718 TGTTGGAAGGAAACCACGAATTAATA 59.284 34.615 0.00 0.00 37.13 0.98
2198 2350 6.478129 TGGAAGGAAACCACGAATTAATAGT 58.522 36.000 0.00 0.00 32.03 2.12
2199 2351 6.596497 TGGAAGGAAACCACGAATTAATAGTC 59.404 38.462 0.00 0.00 32.03 2.59
2200 2352 6.596497 GGAAGGAAACCACGAATTAATAGTCA 59.404 38.462 0.00 0.00 0.00 3.41
2202 2354 7.787725 AGGAAACCACGAATTAATAGTCATC 57.212 36.000 0.00 0.00 0.00 2.92
2203 2355 7.335627 AGGAAACCACGAATTAATAGTCATCA 58.664 34.615 0.00 0.00 0.00 3.07
2204 2356 7.993183 AGGAAACCACGAATTAATAGTCATCAT 59.007 33.333 0.00 0.00 0.00 2.45
2219 2371 5.989477 AGTCATCATTTCTTTACGATCCCA 58.011 37.500 0.00 0.00 0.00 4.37
2220 2372 6.595682 AGTCATCATTTCTTTACGATCCCAT 58.404 36.000 0.00 0.00 0.00 4.00
2221 2373 7.735917 AGTCATCATTTCTTTACGATCCCATA 58.264 34.615 0.00 0.00 0.00 2.74
2222 2374 8.210946 AGTCATCATTTCTTTACGATCCCATAA 58.789 33.333 0.00 0.00 0.00 1.90
2223 2375 8.283291 GTCATCATTTCTTTACGATCCCATAAC 58.717 37.037 0.00 0.00 0.00 1.89
2224 2376 7.990314 TCATCATTTCTTTACGATCCCATAACA 59.010 33.333 0.00 0.00 0.00 2.41
2226 2378 8.568676 TCATTTCTTTACGATCCCATAACAAA 57.431 30.769 0.00 0.00 0.00 2.83
2227 2379 9.184523 TCATTTCTTTACGATCCCATAACAAAT 57.815 29.630 0.00 0.00 0.00 2.32
2234 2386 8.514330 TTACGATCCCATAACAAATAAAAGCT 57.486 30.769 0.00 0.00 0.00 3.74
2235 2387 6.795399 ACGATCCCATAACAAATAAAAGCTG 58.205 36.000 0.00 0.00 0.00 4.24
2236 2388 6.601613 ACGATCCCATAACAAATAAAAGCTGA 59.398 34.615 0.00 0.00 0.00 4.26
2237 2389 7.122055 ACGATCCCATAACAAATAAAAGCTGAA 59.878 33.333 0.00 0.00 0.00 3.02
2238 2390 7.645340 CGATCCCATAACAAATAAAAGCTGAAG 59.355 37.037 0.00 0.00 0.00 3.02
2239 2391 8.593945 ATCCCATAACAAATAAAAGCTGAAGA 57.406 30.769 0.00 0.00 0.00 2.87
2240 2392 7.826690 TCCCATAACAAATAAAAGCTGAAGAC 58.173 34.615 0.00 0.00 0.00 3.01
2241 2393 6.747280 CCCATAACAAATAAAAGCTGAAGACG 59.253 38.462 0.00 0.00 0.00 4.18
2242 2394 6.251376 CCATAACAAATAAAAGCTGAAGACGC 59.749 38.462 0.00 0.00 0.00 5.19
2243 2395 3.810373 ACAAATAAAAGCTGAAGACGCG 58.190 40.909 3.53 3.53 0.00 6.01
2245 2397 3.999229 AATAAAAGCTGAAGACGCGAG 57.001 42.857 15.93 0.00 0.00 5.03
2258 2410 0.672342 ACGCGAGTTAGTGACCTTGT 59.328 50.000 15.93 0.00 46.40 3.16
2259 2411 1.060713 CGCGAGTTAGTGACCTTGTG 58.939 55.000 0.00 0.00 0.00 3.33
2274 2426 2.487934 CTTGTGGTCAGGACTGTTCAG 58.512 52.381 0.00 0.00 0.00 3.02
2275 2427 0.106708 TGTGGTCAGGACTGTTCAGC 59.893 55.000 0.00 0.00 0.00 4.26
2276 2428 0.394565 GTGGTCAGGACTGTTCAGCT 59.605 55.000 0.00 0.00 0.00 4.24
2277 2429 1.618837 GTGGTCAGGACTGTTCAGCTA 59.381 52.381 0.00 0.00 0.00 3.32
2278 2430 1.895798 TGGTCAGGACTGTTCAGCTAG 59.104 52.381 0.00 0.00 0.00 3.42
2279 2431 1.205893 GGTCAGGACTGTTCAGCTAGG 59.794 57.143 0.00 0.00 0.00 3.02
2280 2432 1.896465 GTCAGGACTGTTCAGCTAGGT 59.104 52.381 0.00 0.00 0.00 3.08
2281 2433 1.895798 TCAGGACTGTTCAGCTAGGTG 59.104 52.381 15.93 15.93 0.00 4.00
2282 2434 0.610687 AGGACTGTTCAGCTAGGTGC 59.389 55.000 17.20 4.88 43.29 5.01
2291 2443 4.921834 GCTAGGTGCTCTGTGGTC 57.078 61.111 0.00 0.00 38.95 4.02
2292 2444 1.975327 GCTAGGTGCTCTGTGGTCA 59.025 57.895 0.00 0.00 38.95 4.02
2293 2445 0.390472 GCTAGGTGCTCTGTGGTCAC 60.390 60.000 0.00 0.00 38.95 3.67
2294 2446 1.261480 CTAGGTGCTCTGTGGTCACT 58.739 55.000 2.66 0.00 0.00 3.41
2295 2447 2.447443 CTAGGTGCTCTGTGGTCACTA 58.553 52.381 2.66 0.00 0.00 2.74
2296 2448 1.261480 AGGTGCTCTGTGGTCACTAG 58.739 55.000 2.66 0.00 0.00 2.57
2297 2449 0.969894 GGTGCTCTGTGGTCACTAGT 59.030 55.000 2.66 0.00 0.00 2.57
2300 2452 1.889170 TGCTCTGTGGTCACTAGTCAG 59.111 52.381 0.00 0.00 0.00 3.51
2302 2454 1.203523 CTCTGTGGTCACTAGTCAGGC 59.796 57.143 8.26 0.00 0.00 4.85
2303 2455 1.203063 TCTGTGGTCACTAGTCAGGCT 60.203 52.381 8.26 0.00 0.00 4.58
2304 2456 0.969149 TGTGGTCACTAGTCAGGCTG 59.031 55.000 8.58 8.58 0.00 4.85
2305 2457 1.257743 GTGGTCACTAGTCAGGCTGA 58.742 55.000 14.43 14.43 0.00 4.26
2307 2459 0.174617 GGTCACTAGTCAGGCTGAGC 59.825 60.000 19.38 12.82 0.00 4.26
2309 2461 0.322546 TCACTAGTCAGGCTGAGCGA 60.323 55.000 19.38 7.27 0.00 4.93
2310 2462 0.528017 CACTAGTCAGGCTGAGCGAA 59.472 55.000 19.38 2.65 0.00 4.70
2312 2464 1.407258 ACTAGTCAGGCTGAGCGAATC 59.593 52.381 19.38 4.82 0.00 2.52
2313 2465 0.382158 TAGTCAGGCTGAGCGAATCG 59.618 55.000 19.38 0.00 0.00 3.34
2314 2466 1.139734 GTCAGGCTGAGCGAATCGA 59.860 57.895 19.38 0.00 0.00 3.59
2315 2467 0.249238 GTCAGGCTGAGCGAATCGAT 60.249 55.000 19.38 0.00 0.00 3.59
2316 2468 0.249197 TCAGGCTGAGCGAATCGATG 60.249 55.000 14.43 0.00 0.00 3.84
2318 2470 1.884464 GGCTGAGCGAATCGATGCA 60.884 57.895 6.91 0.00 0.00 3.96
2319 2471 1.226686 GGCTGAGCGAATCGATGCAT 61.227 55.000 6.91 0.00 0.00 3.96
2320 2472 0.163360 GCTGAGCGAATCGATGCATC 59.837 55.000 17.10 17.10 0.00 3.91
2349 2898 2.038295 ACCTCTGCTTCCTCTTGTGAAG 59.962 50.000 0.00 0.00 41.70 3.02
2350 2899 2.301296 CCTCTGCTTCCTCTTGTGAAGA 59.699 50.000 4.30 0.00 41.38 2.87
2351 2900 3.244353 CCTCTGCTTCCTCTTGTGAAGAA 60.244 47.826 4.30 0.00 41.38 2.52
2353 2902 4.978099 TCTGCTTCCTCTTGTGAAGAATT 58.022 39.130 4.30 0.00 41.38 2.17
2356 2905 4.074970 GCTTCCTCTTGTGAAGAATTCCA 58.925 43.478 0.65 0.00 46.93 3.53
2357 2906 4.704057 GCTTCCTCTTGTGAAGAATTCCAT 59.296 41.667 0.65 0.00 46.93 3.41
2358 2907 5.163673 GCTTCCTCTTGTGAAGAATTCCATC 60.164 44.000 0.65 1.83 46.93 3.51
2362 2911 5.102953 TCTTGTGAAGAATTCCATCCGAT 57.897 39.130 0.65 0.00 46.93 4.18
2363 2912 5.118990 TCTTGTGAAGAATTCCATCCGATC 58.881 41.667 0.65 0.00 46.93 3.69
2401 3845 6.716898 TCGCAAGATTCATATCATCATCAC 57.283 37.500 0.00 0.00 45.01 3.06
2402 3846 5.640783 TCGCAAGATTCATATCATCATCACC 59.359 40.000 0.00 0.00 45.01 4.02
2403 3847 5.410439 CGCAAGATTCATATCATCATCACCA 59.590 40.000 0.00 0.00 43.02 4.17
2404 3848 6.093633 CGCAAGATTCATATCATCATCACCAT 59.906 38.462 0.00 0.00 43.02 3.55
2405 3849 7.473366 GCAAGATTCATATCATCATCACCATC 58.527 38.462 0.00 0.00 32.95 3.51
2406 3850 7.120726 GCAAGATTCATATCATCATCACCATCA 59.879 37.037 0.00 0.00 32.95 3.07
2407 3851 9.178758 CAAGATTCATATCATCATCACCATCAT 57.821 33.333 0.00 0.00 32.95 2.45
2408 3852 8.966069 AGATTCATATCATCATCACCATCATC 57.034 34.615 0.00 0.00 32.95 2.92
2409 3853 8.548877 AGATTCATATCATCATCACCATCATCA 58.451 33.333 0.00 0.00 32.95 3.07
2429 3873 3.118992 TCATCTACTGCTACTGCTGGTTG 60.119 47.826 0.00 0.00 41.57 3.77
2434 3878 2.224621 ACTGCTACTGCTGGTTGTTGAT 60.225 45.455 0.00 0.00 41.57 2.57
2436 3880 3.599343 TGCTACTGCTGGTTGTTGATAG 58.401 45.455 0.00 0.00 40.48 2.08
2440 3884 5.463724 GCTACTGCTGGTTGTTGATAGTATC 59.536 44.000 2.97 2.97 36.03 2.24
2444 3888 5.664457 TGCTGGTTGTTGATAGTATCTCTG 58.336 41.667 11.40 1.17 0.00 3.35
2448 3892 5.163550 TGGTTGTTGATAGTATCTCTGGTCG 60.164 44.000 11.40 0.00 0.00 4.79
2450 3894 3.003378 TGTTGATAGTATCTCTGGTCGCG 59.997 47.826 11.40 0.00 0.00 5.87
2451 3895 3.121738 TGATAGTATCTCTGGTCGCGA 57.878 47.619 3.71 3.71 0.00 5.87
2459 3903 1.073216 CTCTGGTCGCGACACACATC 61.073 60.000 37.26 20.87 0.00 3.06
2465 4971 1.649171 GTCGCGACACACATCAACTAG 59.351 52.381 33.09 0.00 0.00 2.57
2469 4975 1.914051 CGACACACATCAACTAGAGCG 59.086 52.381 0.00 0.00 0.00 5.03
2471 4977 2.917971 GACACACATCAACTAGAGCGAC 59.082 50.000 0.00 0.00 0.00 5.19
2475 4981 1.135373 ACATCAACTAGAGCGACGTGG 60.135 52.381 0.00 0.00 0.00 4.94
2479 4985 0.179134 AACTAGAGCGACGTGGATGC 60.179 55.000 0.11 0.00 0.00 3.91
2512 5018 4.742438 GGCAACTTGATTCAACGAACTA 57.258 40.909 0.00 0.00 0.00 2.24
2519 5025 6.053005 ACTTGATTCAACGAACTAGGAACAA 58.947 36.000 0.00 0.00 0.00 2.83
2539 5045 5.303971 ACAATTTCAGTCAGACAAGAGGAG 58.696 41.667 2.66 0.00 0.00 3.69
2542 5048 2.242926 TCAGTCAGACAAGAGGAGTGG 58.757 52.381 2.66 0.00 33.75 4.00
2543 5049 2.158460 TCAGTCAGACAAGAGGAGTGGA 60.158 50.000 2.66 0.00 33.75 4.02
2545 5051 2.158385 AGTCAGACAAGAGGAGTGGACT 60.158 50.000 2.66 0.00 0.00 3.85
2546 5052 2.029470 GTCAGACAAGAGGAGTGGACTG 60.029 54.545 0.00 0.00 0.00 3.51
2552 5058 0.683973 AGAGGAGTGGACTGCAACAG 59.316 55.000 0.87 0.00 36.72 3.16
2553 5059 0.321122 GAGGAGTGGACTGCAACAGG 60.321 60.000 0.87 0.00 36.72 4.00
2558 5092 2.744202 GAGTGGACTGCAACAGGTAATG 59.256 50.000 0.00 0.00 35.51 1.90
2559 5093 1.812571 GTGGACTGCAACAGGTAATGG 59.187 52.381 0.00 0.00 35.51 3.16
2562 5096 2.094675 GACTGCAACAGGTAATGGCAT 58.905 47.619 0.00 0.00 35.51 4.40
2578 5112 1.269309 GGCATAGCAGAGTGTACCTCG 60.269 57.143 5.92 3.61 45.44 4.63
2580 5114 0.663688 ATAGCAGAGTGTACCTCGCG 59.336 55.000 0.00 0.00 45.44 5.87
2585 5119 2.186076 CAGAGTGTACCTCGCGAAATC 58.814 52.381 11.33 3.33 45.44 2.17
2608 5563 7.482654 TCGCTTTATCATAAACATCAAGGAG 57.517 36.000 0.00 0.00 0.00 3.69
2611 5566 7.137426 GCTTTATCATAAACATCAAGGAGCTG 58.863 38.462 0.00 0.00 0.00 4.24
2614 5569 6.690194 ATCATAAACATCAAGGAGCTGAAC 57.310 37.500 0.00 0.00 0.00 3.18
2617 5572 7.044181 TCATAAACATCAAGGAGCTGAACTAG 58.956 38.462 0.00 0.00 0.00 2.57
2625 5580 5.721960 TCAAGGAGCTGAACTAGATAAGGTT 59.278 40.000 0.00 0.00 0.00 3.50
2626 5581 6.213600 TCAAGGAGCTGAACTAGATAAGGTTT 59.786 38.462 0.00 0.00 0.00 3.27
2627 5582 6.228616 AGGAGCTGAACTAGATAAGGTTTC 57.771 41.667 0.00 0.00 0.00 2.78
2628 5583 5.721960 AGGAGCTGAACTAGATAAGGTTTCA 59.278 40.000 0.00 0.00 0.00 2.69
2629 5584 5.813157 GGAGCTGAACTAGATAAGGTTTCAC 59.187 44.000 0.00 0.00 0.00 3.18
2630 5585 6.351456 GGAGCTGAACTAGATAAGGTTTCACT 60.351 42.308 0.00 0.00 0.00 3.41
2639 5594 8.211629 ACTAGATAAGGTTTCACTTTCAACACT 58.788 33.333 0.00 0.00 32.02 3.55
2680 5635 2.351706 GGTAACACCCAAAGACCACA 57.648 50.000 0.00 0.00 30.04 4.17
2681 5636 2.871453 GGTAACACCCAAAGACCACAT 58.129 47.619 0.00 0.00 30.04 3.21
2682 5637 4.023726 GGTAACACCCAAAGACCACATA 57.976 45.455 0.00 0.00 30.04 2.29
2683 5638 4.007659 GGTAACACCCAAAGACCACATAG 58.992 47.826 0.00 0.00 30.04 2.23
2684 5639 3.876309 AACACCCAAAGACCACATAGT 57.124 42.857 0.00 0.00 0.00 2.12
2685 5640 4.986054 AACACCCAAAGACCACATAGTA 57.014 40.909 0.00 0.00 0.00 1.82
2686 5641 4.986054 ACACCCAAAGACCACATAGTAA 57.014 40.909 0.00 0.00 0.00 2.24
2687 5642 4.648651 ACACCCAAAGACCACATAGTAAC 58.351 43.478 0.00 0.00 0.00 2.50
2688 5643 4.007659 CACCCAAAGACCACATAGTAACC 58.992 47.826 0.00 0.00 0.00 2.85
2689 5644 3.009805 ACCCAAAGACCACATAGTAACCC 59.990 47.826 0.00 0.00 0.00 4.11
2690 5645 3.265995 CCCAAAGACCACATAGTAACCCT 59.734 47.826 0.00 0.00 0.00 4.34
2691 5646 4.261801 CCAAAGACCACATAGTAACCCTG 58.738 47.826 0.00 0.00 0.00 4.45
2692 5647 3.629142 AAGACCACATAGTAACCCTGC 57.371 47.619 0.00 0.00 0.00 4.85
2693 5648 2.546899 AGACCACATAGTAACCCTGCA 58.453 47.619 0.00 0.00 0.00 4.41
2694 5649 2.910319 AGACCACATAGTAACCCTGCAA 59.090 45.455 0.00 0.00 0.00 4.08
2695 5650 3.329520 AGACCACATAGTAACCCTGCAAA 59.670 43.478 0.00 0.00 0.00 3.68
2696 5651 4.076394 GACCACATAGTAACCCTGCAAAA 58.924 43.478 0.00 0.00 0.00 2.44
2729 5685 3.669251 AAAGGAGGACTCGAAACTGAG 57.331 47.619 0.00 0.00 41.86 3.35
2742 5698 3.005472 CGAAACTGAGGTACTGAACTGGA 59.995 47.826 0.00 0.00 41.55 3.86
2753 5709 6.041069 AGGTACTGAACTGGAGAACTATATGC 59.959 42.308 0.00 0.00 37.18 3.14
2798 5757 4.888917 TGCACAGTAGTAAAGCACACATA 58.111 39.130 0.00 0.00 0.00 2.29
2800 5759 6.635755 TGCACAGTAGTAAAGCACACATATA 58.364 36.000 0.00 0.00 0.00 0.86
2802 5761 7.224557 TGCACAGTAGTAAAGCACACATATATG 59.775 37.037 11.29 11.29 0.00 1.78
2804 5763 9.744468 CACAGTAGTAAAGCACACATATATGTA 57.256 33.333 17.86 0.00 39.39 2.29
2805 5764 9.745880 ACAGTAGTAAAGCACACATATATGTAC 57.254 33.333 17.86 10.67 39.39 2.90
2806 5765 9.967346 CAGTAGTAAAGCACACATATATGTACT 57.033 33.333 17.86 16.63 39.39 2.73
2807 5766 9.967346 AGTAGTAAAGCACACATATATGTACTG 57.033 33.333 17.86 15.83 39.39 2.74
2817 5810 8.309656 CACACATATATGTACTGGAGATCATGT 58.690 37.037 17.86 4.73 39.39 3.21
2823 5816 5.675684 TGTACTGGAGATCATGTTTGCTA 57.324 39.130 0.00 0.00 0.00 3.49
2832 5825 6.767902 GGAGATCATGTTTGCTAATCACCTTA 59.232 38.462 0.00 0.00 0.00 2.69
2834 5827 8.162878 AGATCATGTTTGCTAATCACCTTATG 57.837 34.615 0.00 0.00 0.00 1.90
2928 7450 8.634335 TTTGTAGAGATCAAATCCATTGTCAA 57.366 30.769 0.00 0.00 40.11 3.18
2966 7488 9.764363 CAGGATAAATTTACAGCACTATCTGTA 57.236 33.333 0.00 0.00 44.77 2.74
2990 7512 1.281867 TCCCCCAAACTGCACTATCAG 59.718 52.381 0.00 0.00 39.86 2.90
2994 7516 3.005554 CCCAAACTGCACTATCAGTCTG 58.994 50.000 0.00 0.00 45.77 3.51
3001 7574 2.683362 TGCACTATCAGTCTGTAGTCCG 59.317 50.000 10.41 4.83 0.00 4.79
3009 7582 2.814919 CAGTCTGTAGTCCGTCTTCAGT 59.185 50.000 9.79 0.00 40.73 3.41
3027 7600 5.001237 TCAGTATGATGCAAAATGCTTGG 57.999 39.130 3.78 0.00 42.56 3.61
3029 7602 2.702592 ATGATGCAAAATGCTTGGGG 57.297 45.000 3.78 0.00 45.31 4.96
3051 7624 3.742385 CAATCAATTTTTGTGGGCCTGT 58.258 40.909 4.53 0.00 0.00 4.00
3070 7644 4.072839 CTGTTTTTACCTCCCCTGTTCTC 58.927 47.826 0.00 0.00 0.00 2.87
3074 7648 1.702699 TACCTCCCCTGTTCTCCCTA 58.297 55.000 0.00 0.00 0.00 3.53
3075 7649 0.797579 ACCTCCCCTGTTCTCCCTAA 59.202 55.000 0.00 0.00 0.00 2.69
3077 7651 1.273896 CCTCCCCTGTTCTCCCTAAGT 60.274 57.143 0.00 0.00 0.00 2.24
3087 7661 4.399618 TGTTCTCCCTAAGTCTTCAGATCG 59.600 45.833 0.00 0.00 0.00 3.69
3098 7672 3.056465 GTCTTCAGATCGTCCACCTTTCT 60.056 47.826 0.00 0.00 0.00 2.52
3107 7681 4.065088 TCGTCCACCTTTCTTTTGATGAG 58.935 43.478 0.00 0.00 0.00 2.90
3143 7717 2.967887 AGGCTGGCACTGATTTTCTTTT 59.032 40.909 3.38 0.00 0.00 2.27
3148 9156 5.406477 GCTGGCACTGATTTTCTTTTAAAGG 59.594 40.000 4.77 0.00 0.00 3.11
3209 9217 6.265577 ACAGAAATAGCAAACAGAACAACAC 58.734 36.000 0.00 0.00 0.00 3.32
3212 9220 5.835113 AATAGCAAACAGAACAACACAGT 57.165 34.783 0.00 0.00 0.00 3.55
3218 9226 3.906720 ACAGAACAACACAGTGGTACT 57.093 42.857 5.31 0.00 0.00 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
102 103 7.911651 TCTTTTGGAGTATCAGAGTTTCAGAT 58.088 34.615 0.00 0.00 36.25 2.90
105 106 7.303182 TCTCTTTTGGAGTATCAGAGTTTCA 57.697 36.000 0.00 0.00 42.40 2.69
122 123 7.066525 TCGTTTACAAACTGGACAATCTCTTTT 59.933 33.333 3.55 0.00 36.77 2.27
231 233 5.359194 AACCGTTGAGGACTCATATTGAT 57.641 39.130 2.42 0.00 45.00 2.57
256 258 5.569413 GCAATATTAGTCTTCACCGGTTTG 58.431 41.667 2.97 3.29 0.00 2.93
272 274 7.148641 TGTGTAAAATTTGTGGTCGCAATATT 58.851 30.769 0.00 0.00 0.00 1.28
291 293 8.856153 TGGTCTTCATTTAGCTTTATGTGTAA 57.144 30.769 0.00 0.00 0.00 2.41
300 302 4.401925 AGCACTTGGTCTTCATTTAGCTT 58.598 39.130 0.00 0.00 0.00 3.74
303 305 5.239306 TCACAAGCACTTGGTCTTCATTTAG 59.761 40.000 14.51 0.00 44.45 1.85
305 307 3.953612 TCACAAGCACTTGGTCTTCATTT 59.046 39.130 14.51 0.00 44.45 2.32
346 348 8.027189 CCTAGCAAGATTTTTACCACCTTAAAC 58.973 37.037 0.00 0.00 0.00 2.01
378 380 2.177016 AGGCTGTTTTTAGTCCCACCTT 59.823 45.455 0.00 0.00 0.00 3.50
462 464 5.163622 CCACGAACCGGTACTAAAGAGAATA 60.164 44.000 8.00 0.00 0.00 1.75
577 579 1.665442 GGTTTGCATTTGAGCCGGT 59.335 52.632 1.90 0.00 0.00 5.28
646 649 0.247736 ATGTCCGTCCTTGAGCAGTC 59.752 55.000 0.00 0.00 0.00 3.51
691 694 9.219603 CAAACAAAGGAGACTATGTTCAATCTA 57.780 33.333 0.00 0.00 42.68 1.98
725 728 9.695526 CATGTTCAAAATCCAGTTTAAAGATGA 57.304 29.630 2.58 0.00 33.17 2.92
736 739 3.189080 TGTCTCGCATGTTCAAAATCCAG 59.811 43.478 0.00 0.00 0.00 3.86
778 781 0.394899 GAGCCTGGGCAGCTAAATGT 60.395 55.000 14.39 0.00 41.75 2.71
809 812 3.163630 TGCAAACAGAGAACAAAAGGC 57.836 42.857 0.00 0.00 0.00 4.35
810 813 4.928615 TGTTTGCAAACAGAGAACAAAAGG 59.071 37.500 35.10 0.00 43.45 3.11
869 872 7.930865 GCTTCTTGATATATCAACAGGAGTCTT 59.069 37.037 21.67 0.00 41.51 3.01
920 923 6.377146 ACAAGGTAAAAGTATGCTACCCAATG 59.623 38.462 0.00 0.00 36.52 2.82
921 924 6.490492 ACAAGGTAAAAGTATGCTACCCAAT 58.510 36.000 0.00 0.00 36.52 3.16
961 974 1.795768 TTGTGCTAGTTGAAGAGGCG 58.204 50.000 0.00 0.00 0.00 5.52
975 989 4.362279 ACATGCCATCGATAAATTTGTGC 58.638 39.130 0.00 0.00 0.00 4.57
988 1003 8.737168 ATTACCATATATGTGTACATGCCATC 57.263 34.615 11.73 0.00 37.15 3.51
1036 1094 1.160137 GAATCAGGCTGTCGCTGTTT 58.840 50.000 15.27 0.00 36.09 2.83
1042 1100 1.195448 GTGTTGTGAATCAGGCTGTCG 59.805 52.381 15.27 0.00 0.00 4.35
1054 1112 2.757314 TGCCAATTTGAGTGTGTTGTGA 59.243 40.909 0.00 0.00 0.00 3.58
1061 1119 3.756933 AGCATTTGCCAATTTGAGTGT 57.243 38.095 0.00 0.00 43.38 3.55
1100 1161 9.253832 TCTATCCTTCTCTTCAATATGATCCTC 57.746 37.037 0.00 0.00 0.00 3.71
1101 1162 9.787334 ATCTATCCTTCTCTTCAATATGATCCT 57.213 33.333 0.00 0.00 0.00 3.24
1141 1202 7.047891 TCTCAGCTTCTTTAGTTGTTTCTTCA 58.952 34.615 0.00 0.00 36.55 3.02
1152 1213 5.692204 TCTTTCACGTTCTCAGCTTCTTTAG 59.308 40.000 0.00 0.00 0.00 1.85
1225 1286 3.733960 GCAAAGGTCGCCCCGAAC 61.734 66.667 0.00 0.00 44.66 3.95
1264 1325 4.819105 ACCTCTATTGGTTTGATCGTCA 57.181 40.909 0.00 0.00 36.89 4.35
1416 1477 4.185413 CGCTCAAGTACATGCGGT 57.815 55.556 11.88 0.00 43.97 5.68
1439 1500 2.886523 CTGAACTTGCCATGAAGAACCA 59.113 45.455 0.00 0.00 0.00 3.67
1589 1650 4.216687 CCGTGCAAGAATACCCAACTTTAA 59.783 41.667 0.00 0.00 0.00 1.52
1637 1705 1.029681 AACCACTTTGAAGCCCGAAC 58.970 50.000 0.00 0.00 0.00 3.95
1647 1715 4.154015 TCATCGTCATTGCTAACCACTTTG 59.846 41.667 0.00 0.00 0.00 2.77
1665 1733 0.379669 GAGCAGTTGGGCAATCATCG 59.620 55.000 0.00 0.00 35.83 3.84
1670 1738 2.361610 CCGGAGCAGTTGGGCAAT 60.362 61.111 0.00 0.00 35.83 3.56
1762 1833 6.595326 TCATCACATGTTTGATCCTTCTACAC 59.405 38.462 0.00 0.00 33.74 2.90
1763 1834 6.710278 TCATCACATGTTTGATCCTTCTACA 58.290 36.000 0.00 0.00 33.74 2.74
1764 1835 6.238320 GCTCATCACATGTTTGATCCTTCTAC 60.238 42.308 8.33 0.00 33.74 2.59
1765 1836 5.819379 GCTCATCACATGTTTGATCCTTCTA 59.181 40.000 8.33 0.00 33.74 2.10
1771 1842 6.314648 TGTTCTAGCTCATCACATGTTTGATC 59.685 38.462 8.33 5.33 33.74 2.92
1799 1870 7.884877 AGTCACAAATCTTAACAGATCCATTCA 59.115 33.333 0.00 0.00 39.00 2.57
1803 1874 9.166173 CATTAGTCACAAATCTTAACAGATCCA 57.834 33.333 0.00 0.00 39.00 3.41
1805 1876 9.167311 ACCATTAGTCACAAATCTTAACAGATC 57.833 33.333 0.00 0.00 39.00 2.75
1806 1877 9.520515 AACCATTAGTCACAAATCTTAACAGAT 57.479 29.630 0.00 0.00 42.05 2.90
1807 1878 8.918202 AACCATTAGTCACAAATCTTAACAGA 57.082 30.769 0.00 0.00 0.00 3.41
1808 1879 7.957484 CGAACCATTAGTCACAAATCTTAACAG 59.043 37.037 0.00 0.00 0.00 3.16
1810 1881 7.803724 ACGAACCATTAGTCACAAATCTTAAC 58.196 34.615 0.00 0.00 0.00 2.01
1812 1883 7.156000 TGACGAACCATTAGTCACAAATCTTA 58.844 34.615 1.01 0.00 39.63 2.10
1813 1884 5.995282 TGACGAACCATTAGTCACAAATCTT 59.005 36.000 1.01 0.00 39.63 2.40
1814 1885 5.547465 TGACGAACCATTAGTCACAAATCT 58.453 37.500 1.01 0.00 39.63 2.40
1815 1886 5.856126 TGACGAACCATTAGTCACAAATC 57.144 39.130 1.01 0.00 39.63 2.17
1829 1902 4.083537 TGAGCAAACATATGTTGACGAACC 60.084 41.667 21.46 8.30 38.44 3.62
1834 1907 5.182001 AGGTTCTGAGCAAACATATGTTGAC 59.818 40.000 21.46 15.78 38.44 3.18
1868 1941 5.476945 AGGAAGAACAAACACAAACTTCTGT 59.523 36.000 0.00 0.00 35.55 3.41
1870 1943 5.105756 CCAGGAAGAACAAACACAAACTTCT 60.106 40.000 0.00 0.00 35.55 2.85
1881 1956 3.630312 GCACAAGTACCAGGAAGAACAAA 59.370 43.478 0.00 0.00 0.00 2.83
1887 1962 2.851195 ACAAGCACAAGTACCAGGAAG 58.149 47.619 0.00 0.00 0.00 3.46
1892 1967 8.776470 GTTTACTTATTACAAGCACAAGTACCA 58.224 33.333 0.00 0.00 32.86 3.25
1916 2014 6.125589 AGGAAAAATATGGCAAATGGTGTT 57.874 33.333 0.00 0.00 0.00 3.32
1927 2025 8.523915 TGCAGGCATATATAGGAAAAATATGG 57.476 34.615 0.00 0.00 35.20 2.74
1938 2036 4.615949 GATCGGACTGCAGGCATATATAG 58.384 47.826 23.90 3.12 0.00 1.31
1941 2039 1.202348 CGATCGGACTGCAGGCATATA 59.798 52.381 23.90 3.05 0.00 0.86
1942 2040 0.037882 CGATCGGACTGCAGGCATAT 60.038 55.000 23.90 14.08 0.00 1.78
1943 2041 1.106944 TCGATCGGACTGCAGGCATA 61.107 55.000 23.90 8.98 0.00 3.14
1944 2042 1.960040 TTCGATCGGACTGCAGGCAT 61.960 55.000 23.90 7.07 0.00 4.40
1946 2044 1.227380 ATTCGATCGGACTGCAGGC 60.227 57.895 19.93 16.59 0.00 4.85
1947 2045 0.877649 CCATTCGATCGGACTGCAGG 60.878 60.000 19.93 0.00 0.00 4.85
1948 2046 0.179100 ACCATTCGATCGGACTGCAG 60.179 55.000 16.41 13.48 0.00 4.41
1949 2047 0.249120 AACCATTCGATCGGACTGCA 59.751 50.000 16.41 0.00 0.00 4.41
1950 2048 2.218953 TAACCATTCGATCGGACTGC 57.781 50.000 16.41 0.00 0.00 4.40
1951 2049 3.717707 ACATAACCATTCGATCGGACTG 58.282 45.455 16.41 10.05 0.00 3.51
1952 2050 4.119862 CAACATAACCATTCGATCGGACT 58.880 43.478 16.41 0.00 0.00 3.85
1953 2051 3.869246 ACAACATAACCATTCGATCGGAC 59.131 43.478 16.41 0.00 0.00 4.79
1954 2052 4.116961 GACAACATAACCATTCGATCGGA 58.883 43.478 16.41 7.00 0.00 4.55
1955 2053 3.060540 CGACAACATAACCATTCGATCGG 60.061 47.826 16.41 0.89 0.00 4.18
1956 2054 3.794564 TCGACAACATAACCATTCGATCG 59.205 43.478 9.36 9.36 30.93 3.69
1957 2055 4.317139 CGTCGACAACATAACCATTCGATC 60.317 45.833 17.16 0.00 37.76 3.69
1958 2056 3.550275 CGTCGACAACATAACCATTCGAT 59.450 43.478 17.16 0.00 37.76 3.59
1959 2057 2.918600 CGTCGACAACATAACCATTCGA 59.081 45.455 17.16 0.00 33.34 3.71
1960 2058 2.664568 ACGTCGACAACATAACCATTCG 59.335 45.455 17.16 0.00 0.00 3.34
1961 2059 3.924686 AGACGTCGACAACATAACCATTC 59.075 43.478 17.16 0.00 0.00 2.67
1962 2060 3.678072 CAGACGTCGACAACATAACCATT 59.322 43.478 17.16 0.00 0.00 3.16
1963 2061 3.250744 CAGACGTCGACAACATAACCAT 58.749 45.455 17.16 0.00 0.00 3.55
1964 2062 2.034939 ACAGACGTCGACAACATAACCA 59.965 45.455 17.16 0.00 0.00 3.67
1965 2063 2.407361 CACAGACGTCGACAACATAACC 59.593 50.000 17.16 0.00 0.00 2.85
1966 2064 2.160013 GCACAGACGTCGACAACATAAC 60.160 50.000 17.16 0.00 0.00 1.89
1967 2065 2.055838 GCACAGACGTCGACAACATAA 58.944 47.619 17.16 0.00 0.00 1.90
1968 2066 1.001158 TGCACAGACGTCGACAACATA 60.001 47.619 17.16 0.00 0.00 2.29
1969 2067 0.249280 TGCACAGACGTCGACAACAT 60.249 50.000 17.16 0.00 0.00 2.71
1970 2068 1.139947 TGCACAGACGTCGACAACA 59.860 52.632 17.16 3.60 0.00 3.33
1971 2069 1.143373 TGTGCACAGACGTCGACAAC 61.143 55.000 17.42 8.58 0.00 3.32
1972 2070 0.458716 TTGTGCACAGACGTCGACAA 60.459 50.000 20.59 11.95 0.00 3.18
1973 2071 0.458716 TTTGTGCACAGACGTCGACA 60.459 50.000 20.59 6.61 0.00 4.35
1974 2072 0.229753 CTTTGTGCACAGACGTCGAC 59.770 55.000 20.59 5.18 0.00 4.20
1975 2073 0.179121 ACTTTGTGCACAGACGTCGA 60.179 50.000 20.59 0.00 0.00 4.20
1976 2074 1.483316 TACTTTGTGCACAGACGTCG 58.517 50.000 20.59 6.23 0.00 5.12
1977 2075 2.157668 CCATACTTTGTGCACAGACGTC 59.842 50.000 20.59 7.70 0.00 4.34
1978 2076 2.143122 CCATACTTTGTGCACAGACGT 58.857 47.619 20.59 18.86 0.00 4.34
1979 2077 2.157668 GTCCATACTTTGTGCACAGACG 59.842 50.000 20.59 14.19 0.00 4.18
1980 2078 2.157668 CGTCCATACTTTGTGCACAGAC 59.842 50.000 20.59 19.18 0.00 3.51
1981 2079 2.412870 CGTCCATACTTTGTGCACAGA 58.587 47.619 20.59 15.19 0.00 3.41
1982 2080 1.464608 CCGTCCATACTTTGTGCACAG 59.535 52.381 20.59 12.15 0.00 3.66
1983 2081 1.202710 ACCGTCCATACTTTGTGCACA 60.203 47.619 17.42 17.42 0.00 4.57
1984 2082 1.519408 ACCGTCCATACTTTGTGCAC 58.481 50.000 10.75 10.75 0.00 4.57
1985 2083 1.876799 CAACCGTCCATACTTTGTGCA 59.123 47.619 0.00 0.00 0.00 4.57
1986 2084 2.147958 TCAACCGTCCATACTTTGTGC 58.852 47.619 0.00 0.00 0.00 4.57
1987 2085 5.371115 AATTCAACCGTCCATACTTTGTG 57.629 39.130 0.00 0.00 0.00 3.33
1994 2092 3.130164 CCATGCAAATTCAACCGTCCATA 59.870 43.478 0.00 0.00 0.00 2.74
2014 2112 3.072330 ACAGATGACACAATACCACACCA 59.928 43.478 0.00 0.00 0.00 4.17
2025 2123 8.882736 GTTAATGTATTCATGACAGATGACACA 58.117 33.333 0.00 0.00 34.19 3.72
2026 2124 8.338259 GGTTAATGTATTCATGACAGATGACAC 58.662 37.037 0.00 0.00 34.19 3.67
2028 2126 8.437360 TGGTTAATGTATTCATGACAGATGAC 57.563 34.615 0.00 0.00 34.19 3.06
2031 2129 9.466497 AAACTGGTTAATGTATTCATGACAGAT 57.534 29.630 0.00 0.00 34.19 2.90
2033 2131 8.514594 ACAAACTGGTTAATGTATTCATGACAG 58.485 33.333 0.00 0.00 34.19 3.51
2034 2132 8.402798 ACAAACTGGTTAATGTATTCATGACA 57.597 30.769 0.00 0.00 34.19 3.58
2039 2137 9.787435 AGACTTACAAACTGGTTAATGTATTCA 57.213 29.630 0.73 0.00 0.00 2.57
2041 2139 9.569122 ACAGACTTACAAACTGGTTAATGTATT 57.431 29.630 0.00 0.00 36.17 1.89
2042 2140 9.569122 AACAGACTTACAAACTGGTTAATGTAT 57.431 29.630 0.00 0.00 36.17 2.29
2043 2141 8.967664 AACAGACTTACAAACTGGTTAATGTA 57.032 30.769 0.00 0.00 36.17 2.29
2044 2142 7.875327 AACAGACTTACAAACTGGTTAATGT 57.125 32.000 0.00 0.00 36.17 2.71
2045 2143 9.581099 AAAAACAGACTTACAAACTGGTTAATG 57.419 29.630 0.00 0.00 40.06 1.90
2049 2147 9.016438 TCTTAAAAACAGACTTACAAACTGGTT 57.984 29.630 0.00 0.00 42.26 3.67
2050 2148 8.570068 TCTTAAAAACAGACTTACAAACTGGT 57.430 30.769 0.00 0.00 36.17 4.00
2051 2149 9.450807 CATCTTAAAAACAGACTTACAAACTGG 57.549 33.333 0.00 0.00 36.17 4.00
2095 2238 3.810941 TGTGCGTAAACCCAAGTAAGAAG 59.189 43.478 0.00 0.00 0.00 2.85
2098 2241 4.555348 TTTGTGCGTAAACCCAAGTAAG 57.445 40.909 0.00 0.00 0.00 2.34
2112 2255 4.065423 ACATCTACGTTTCATTTGTGCG 57.935 40.909 0.00 0.00 0.00 5.34
2113 2256 6.599437 AGTTACATCTACGTTTCATTTGTGC 58.401 36.000 0.00 0.00 0.00 4.57
2114 2257 7.792925 TGAGTTACATCTACGTTTCATTTGTG 58.207 34.615 0.00 0.00 0.00 3.33
2120 2263 6.972901 CAGCTATGAGTTACATCTACGTTTCA 59.027 38.462 0.00 0.00 40.07 2.69
2121 2264 7.194278 TCAGCTATGAGTTACATCTACGTTTC 58.806 38.462 0.00 0.00 40.07 2.78
2140 2288 3.326588 ACACAACCCACAATACTCAGCTA 59.673 43.478 0.00 0.00 0.00 3.32
2141 2289 2.106511 ACACAACCCACAATACTCAGCT 59.893 45.455 0.00 0.00 0.00 4.24
2148 2296 4.017126 TGAACACAACACAACCCACAATA 58.983 39.130 0.00 0.00 0.00 1.90
2150 2298 2.239400 TGAACACAACACAACCCACAA 58.761 42.857 0.00 0.00 0.00 3.33
2154 2302 3.186119 CAACATGAACACAACACAACCC 58.814 45.455 0.00 0.00 0.00 4.11
2156 2304 4.103365 TCCAACATGAACACAACACAAC 57.897 40.909 0.00 0.00 0.00 3.32
2157 2305 4.381398 CCTTCCAACATGAACACAACACAA 60.381 41.667 0.00 0.00 0.00 3.33
2160 2308 3.625853 TCCTTCCAACATGAACACAACA 58.374 40.909 0.00 0.00 0.00 3.33
2161 2309 4.647424 TTCCTTCCAACATGAACACAAC 57.353 40.909 0.00 0.00 0.00 3.32
2162 2310 4.142049 GGTTTCCTTCCAACATGAACACAA 60.142 41.667 0.00 0.00 0.00 3.33
2164 2312 3.383185 TGGTTTCCTTCCAACATGAACAC 59.617 43.478 0.00 0.00 31.50 3.32
2165 2313 3.383185 GTGGTTTCCTTCCAACATGAACA 59.617 43.478 0.00 0.00 36.68 3.18
2166 2314 3.550030 CGTGGTTTCCTTCCAACATGAAC 60.550 47.826 0.00 0.00 36.68 3.18
2167 2315 2.621055 CGTGGTTTCCTTCCAACATGAA 59.379 45.455 0.00 0.00 36.68 2.57
2168 2316 2.158740 TCGTGGTTTCCTTCCAACATGA 60.159 45.455 0.00 0.00 36.68 3.07
2169 2317 2.226330 TCGTGGTTTCCTTCCAACATG 58.774 47.619 0.00 0.00 36.68 3.21
2170 2318 2.649531 TCGTGGTTTCCTTCCAACAT 57.350 45.000 0.00 0.00 36.68 2.71
2172 2320 5.441709 TTAATTCGTGGTTTCCTTCCAAC 57.558 39.130 0.00 0.00 36.68 3.77
2174 2322 6.478129 ACTATTAATTCGTGGTTTCCTTCCA 58.522 36.000 0.00 0.00 0.00 3.53
2175 2323 6.596497 TGACTATTAATTCGTGGTTTCCTTCC 59.404 38.462 0.00 0.00 0.00 3.46
2192 2344 9.706691 GGGATCGTAAAGAAATGATGACTATTA 57.293 33.333 0.00 0.00 0.00 0.98
2193 2345 8.210946 TGGGATCGTAAAGAAATGATGACTATT 58.789 33.333 0.00 0.00 0.00 1.73
2194 2346 7.735917 TGGGATCGTAAAGAAATGATGACTAT 58.264 34.615 0.00 0.00 0.00 2.12
2195 2347 7.119709 TGGGATCGTAAAGAAATGATGACTA 57.880 36.000 0.00 0.00 0.00 2.59
2196 2348 5.989477 TGGGATCGTAAAGAAATGATGACT 58.011 37.500 0.00 0.00 0.00 3.41
2198 2350 7.990314 TGTTATGGGATCGTAAAGAAATGATGA 59.010 33.333 0.00 0.00 0.00 2.92
2199 2351 8.153479 TGTTATGGGATCGTAAAGAAATGATG 57.847 34.615 0.00 0.00 0.00 3.07
2200 2352 8.746052 TTGTTATGGGATCGTAAAGAAATGAT 57.254 30.769 0.00 0.00 0.00 2.45
2207 2359 9.233232 GCTTTTATTTGTTATGGGATCGTAAAG 57.767 33.333 0.00 0.00 0.00 1.85
2211 2363 6.601613 TCAGCTTTTATTTGTTATGGGATCGT 59.398 34.615 0.00 0.00 0.00 3.73
2212 2364 7.026631 TCAGCTTTTATTTGTTATGGGATCG 57.973 36.000 0.00 0.00 0.00 3.69
2213 2365 8.686334 TCTTCAGCTTTTATTTGTTATGGGATC 58.314 33.333 0.00 0.00 0.00 3.36
2215 2367 7.361713 CGTCTTCAGCTTTTATTTGTTATGGGA 60.362 37.037 0.00 0.00 0.00 4.37
2216 2368 6.747280 CGTCTTCAGCTTTTATTTGTTATGGG 59.253 38.462 0.00 0.00 0.00 4.00
2217 2369 6.251376 GCGTCTTCAGCTTTTATTTGTTATGG 59.749 38.462 0.00 0.00 0.00 2.74
2219 2371 6.021596 CGCGTCTTCAGCTTTTATTTGTTAT 58.978 36.000 0.00 0.00 0.00 1.89
2220 2372 5.177881 TCGCGTCTTCAGCTTTTATTTGTTA 59.822 36.000 5.77 0.00 0.00 2.41
2221 2373 4.024387 TCGCGTCTTCAGCTTTTATTTGTT 60.024 37.500 5.77 0.00 0.00 2.83
2222 2374 3.496884 TCGCGTCTTCAGCTTTTATTTGT 59.503 39.130 5.77 0.00 0.00 2.83
2223 2375 4.065423 TCGCGTCTTCAGCTTTTATTTG 57.935 40.909 5.77 0.00 0.00 2.32
2224 2376 3.746492 ACTCGCGTCTTCAGCTTTTATTT 59.254 39.130 5.77 0.00 0.00 1.40
2226 2378 2.960819 ACTCGCGTCTTCAGCTTTTAT 58.039 42.857 5.77 0.00 0.00 1.40
2227 2379 2.433868 ACTCGCGTCTTCAGCTTTTA 57.566 45.000 5.77 0.00 0.00 1.52
2229 2381 2.288273 ACTAACTCGCGTCTTCAGCTTT 60.288 45.455 5.77 0.00 0.00 3.51
2230 2382 1.269998 ACTAACTCGCGTCTTCAGCTT 59.730 47.619 5.77 0.00 0.00 3.74
2231 2383 0.882474 ACTAACTCGCGTCTTCAGCT 59.118 50.000 5.77 0.00 0.00 4.24
2234 2386 1.068748 GGTCACTAACTCGCGTCTTCA 60.069 52.381 5.77 0.00 0.00 3.02
2235 2387 1.199558 AGGTCACTAACTCGCGTCTTC 59.800 52.381 5.77 0.00 0.00 2.87
2236 2388 1.245732 AGGTCACTAACTCGCGTCTT 58.754 50.000 5.77 0.64 0.00 3.01
2237 2389 1.068472 CAAGGTCACTAACTCGCGTCT 60.068 52.381 5.77 0.00 0.00 4.18
2238 2390 1.335689 ACAAGGTCACTAACTCGCGTC 60.336 52.381 5.77 0.00 0.00 5.19
2239 2391 0.672342 ACAAGGTCACTAACTCGCGT 59.328 50.000 5.77 0.00 0.00 6.01
2240 2392 1.060713 CACAAGGTCACTAACTCGCG 58.939 55.000 0.00 0.00 0.00 5.87
2241 2393 1.429463 CCACAAGGTCACTAACTCGC 58.571 55.000 0.00 0.00 0.00 5.03
2253 2405 1.140852 TGAACAGTCCTGACCACAAGG 59.859 52.381 0.40 0.00 42.21 3.61
2254 2406 2.487934 CTGAACAGTCCTGACCACAAG 58.512 52.381 0.40 0.00 0.00 3.16
2255 2407 1.475034 GCTGAACAGTCCTGACCACAA 60.475 52.381 0.40 0.00 0.00 3.33
2256 2408 0.106708 GCTGAACAGTCCTGACCACA 59.893 55.000 0.40 0.00 0.00 4.17
2258 2410 1.895798 CTAGCTGAACAGTCCTGACCA 59.104 52.381 0.00 0.00 0.00 4.02
2259 2411 1.205893 CCTAGCTGAACAGTCCTGACC 59.794 57.143 0.00 0.00 0.00 4.02
2261 2413 1.895798 CACCTAGCTGAACAGTCCTGA 59.104 52.381 0.00 0.00 0.00 3.86
2264 2416 3.145228 GCACCTAGCTGAACAGTCC 57.855 57.895 0.00 0.00 41.15 3.85
2274 2426 0.390472 GTGACCACAGAGCACCTAGC 60.390 60.000 0.00 0.00 46.19 3.42
2275 2427 1.261480 AGTGACCACAGAGCACCTAG 58.739 55.000 2.78 0.00 33.14 3.02
2276 2428 2.225041 ACTAGTGACCACAGAGCACCTA 60.225 50.000 0.00 0.00 33.14 3.08
2277 2429 1.261480 CTAGTGACCACAGAGCACCT 58.739 55.000 2.78 0.00 33.14 4.00
2278 2430 0.969894 ACTAGTGACCACAGAGCACC 59.030 55.000 0.00 0.00 33.14 5.01
2279 2431 1.613925 TGACTAGTGACCACAGAGCAC 59.386 52.381 0.00 0.00 0.00 4.40
2280 2432 1.889170 CTGACTAGTGACCACAGAGCA 59.111 52.381 0.00 0.00 0.00 4.26
2281 2433 1.203523 CCTGACTAGTGACCACAGAGC 59.796 57.143 0.00 0.00 0.00 4.09
2282 2434 1.203523 GCCTGACTAGTGACCACAGAG 59.796 57.143 0.00 2.30 0.00 3.35
2283 2435 1.203063 AGCCTGACTAGTGACCACAGA 60.203 52.381 0.00 0.00 0.00 3.41
2284 2436 1.067283 CAGCCTGACTAGTGACCACAG 60.067 57.143 0.00 0.22 0.00 3.66
2286 2438 1.203523 CTCAGCCTGACTAGTGACCAC 59.796 57.143 0.00 0.00 0.00 4.16
2287 2439 1.550327 CTCAGCCTGACTAGTGACCA 58.450 55.000 0.00 0.00 0.00 4.02
2288 2440 0.174617 GCTCAGCCTGACTAGTGACC 59.825 60.000 0.00 0.00 0.00 4.02
2290 2442 0.322546 TCGCTCAGCCTGACTAGTGA 60.323 55.000 0.00 0.00 0.00 3.41
2291 2443 0.528017 TTCGCTCAGCCTGACTAGTG 59.472 55.000 0.00 0.00 0.00 2.74
2292 2444 1.407258 GATTCGCTCAGCCTGACTAGT 59.593 52.381 0.00 0.00 0.00 2.57
2293 2445 1.599171 CGATTCGCTCAGCCTGACTAG 60.599 57.143 0.00 0.00 0.00 2.57
2294 2446 0.382158 CGATTCGCTCAGCCTGACTA 59.618 55.000 0.00 0.00 0.00 2.59
2295 2447 1.140589 CGATTCGCTCAGCCTGACT 59.859 57.895 0.00 0.00 0.00 3.41
2296 2448 0.249238 ATCGATTCGCTCAGCCTGAC 60.249 55.000 0.00 0.00 0.00 3.51
2297 2449 0.249197 CATCGATTCGCTCAGCCTGA 60.249 55.000 0.00 0.00 0.00 3.86
2300 2452 1.226686 ATGCATCGATTCGCTCAGCC 61.227 55.000 8.93 0.00 0.00 4.85
2313 2465 3.673052 GCAGAGGTCTAGATCGATGCATC 60.673 52.174 22.92 17.10 31.16 3.91
2314 2466 2.230992 GCAGAGGTCTAGATCGATGCAT 59.769 50.000 22.92 0.00 31.16 3.96
2315 2467 1.611006 GCAGAGGTCTAGATCGATGCA 59.389 52.381 22.92 0.00 31.16 3.96
2316 2468 1.885887 AGCAGAGGTCTAGATCGATGC 59.114 52.381 21.27 21.27 0.00 3.91
2318 2470 3.153919 GGAAGCAGAGGTCTAGATCGAT 58.846 50.000 0.00 0.00 0.00 3.59
2319 2471 2.173782 AGGAAGCAGAGGTCTAGATCGA 59.826 50.000 0.00 0.00 0.00 3.59
2320 2472 2.552315 GAGGAAGCAGAGGTCTAGATCG 59.448 54.545 0.00 0.00 0.00 3.69
2323 2475 3.245443 ACAAGAGGAAGCAGAGGTCTAGA 60.245 47.826 0.00 0.00 0.00 2.43
2324 2476 3.096092 ACAAGAGGAAGCAGAGGTCTAG 58.904 50.000 0.00 0.00 0.00 2.43
2325 2477 2.828520 CACAAGAGGAAGCAGAGGTCTA 59.171 50.000 0.00 0.00 0.00 2.59
2327 2479 1.620819 TCACAAGAGGAAGCAGAGGTC 59.379 52.381 0.00 0.00 0.00 3.85
2349 2898 4.981794 ACAAAAACGATCGGATGGAATTC 58.018 39.130 20.98 0.00 0.00 2.17
2350 2899 5.385509 AACAAAAACGATCGGATGGAATT 57.614 34.783 20.98 0.00 0.00 2.17
2351 2900 5.183140 AGAAACAAAAACGATCGGATGGAAT 59.817 36.000 20.98 0.00 0.00 3.01
2353 2902 4.069304 AGAAACAAAAACGATCGGATGGA 58.931 39.130 20.98 0.00 0.00 3.41
2356 2905 5.432885 ACAAGAAACAAAAACGATCGGAT 57.567 34.783 20.98 4.82 0.00 4.18
2357 2906 4.551217 CGACAAGAAACAAAAACGATCGGA 60.551 41.667 20.98 0.00 0.00 4.55
2358 2907 3.657625 CGACAAGAAACAAAAACGATCGG 59.342 43.478 20.98 3.20 0.00 4.18
2362 2911 3.473093 TGCGACAAGAAACAAAAACGA 57.527 38.095 0.00 0.00 0.00 3.85
2363 2912 3.849145 TCTTGCGACAAGAAACAAAAACG 59.151 39.130 16.49 0.00 0.00 3.60
2388 3832 9.262358 GTAGATGATGATGGTGATGATGATATG 57.738 37.037 0.00 0.00 0.00 1.78
2401 3845 4.021280 AGCAGTAGCAGTAGATGATGATGG 60.021 45.833 0.00 0.00 45.49 3.51
2402 3846 4.924462 CAGCAGTAGCAGTAGATGATGATG 59.076 45.833 0.00 0.00 45.49 3.07
2403 3847 4.021280 CCAGCAGTAGCAGTAGATGATGAT 60.021 45.833 0.00 0.00 45.49 2.45
2404 3848 3.320256 CCAGCAGTAGCAGTAGATGATGA 59.680 47.826 0.00 0.00 45.49 2.92
2405 3849 3.069300 ACCAGCAGTAGCAGTAGATGATG 59.931 47.826 0.00 0.00 45.49 3.07
2406 3850 3.303938 ACCAGCAGTAGCAGTAGATGAT 58.696 45.455 0.00 0.00 45.49 2.45
2407 3851 2.739943 ACCAGCAGTAGCAGTAGATGA 58.260 47.619 0.00 0.00 45.49 2.92
2408 3852 3.193263 CAACCAGCAGTAGCAGTAGATG 58.807 50.000 0.00 0.00 45.49 2.90
2409 3853 2.834549 ACAACCAGCAGTAGCAGTAGAT 59.165 45.455 0.00 0.00 45.49 1.98
2429 3873 3.250280 TCGCGACCAGAGATACTATCAAC 59.750 47.826 3.71 0.00 0.00 3.18
2434 3878 1.938577 GTGTCGCGACCAGAGATACTA 59.061 52.381 34.34 10.63 37.68 1.82
2436 3880 0.450583 TGTGTCGCGACCAGAGATAC 59.549 55.000 34.34 23.68 40.21 2.24
2440 3884 1.073216 GATGTGTGTCGCGACCAGAG 61.073 60.000 34.34 0.00 0.00 3.35
2444 3888 0.944311 AGTTGATGTGTGTCGCGACC 60.944 55.000 34.34 25.11 0.00 4.79
2448 3892 1.656095 GCTCTAGTTGATGTGTGTCGC 59.344 52.381 0.00 0.00 0.00 5.19
2450 3894 2.917971 GTCGCTCTAGTTGATGTGTGTC 59.082 50.000 0.00 0.00 0.00 3.67
2451 3895 2.668556 CGTCGCTCTAGTTGATGTGTGT 60.669 50.000 0.00 0.00 0.00 3.72
2459 3903 1.550065 CATCCACGTCGCTCTAGTTG 58.450 55.000 0.00 0.00 0.00 3.16
2465 4971 1.299468 CCTAGCATCCACGTCGCTC 60.299 63.158 1.91 0.00 37.20 5.03
2469 4975 1.337387 GACCTACCTAGCATCCACGTC 59.663 57.143 0.00 0.00 0.00 4.34
2471 4977 1.338337 CTGACCTACCTAGCATCCACG 59.662 57.143 0.00 0.00 0.00 4.94
2475 4981 1.414158 TGCCTGACCTACCTAGCATC 58.586 55.000 0.00 0.00 0.00 3.91
2479 4985 2.832129 TCAAGTTGCCTGACCTACCTAG 59.168 50.000 0.00 0.00 0.00 3.02
2506 5012 5.926542 TCTGACTGAAATTGTTCCTAGTTCG 59.073 40.000 0.00 0.00 32.28 3.95
2512 5018 5.684704 TCTTGTCTGACTGAAATTGTTCCT 58.315 37.500 9.51 0.00 32.28 3.36
2519 5025 4.262808 CCACTCCTCTTGTCTGACTGAAAT 60.263 45.833 9.51 0.00 0.00 2.17
2539 5045 1.812571 CCATTACCTGTTGCAGTCCAC 59.187 52.381 0.00 0.00 0.00 4.02
2542 5048 1.533625 TGCCATTACCTGTTGCAGTC 58.466 50.000 0.00 0.00 0.00 3.51
2543 5049 2.220653 ATGCCATTACCTGTTGCAGT 57.779 45.000 0.00 0.00 35.10 4.40
2545 5051 2.023673 GCTATGCCATTACCTGTTGCA 58.976 47.619 0.00 0.00 36.23 4.08
2546 5052 2.023673 TGCTATGCCATTACCTGTTGC 58.976 47.619 0.00 0.00 0.00 4.17
2552 5058 3.199880 ACACTCTGCTATGCCATTACC 57.800 47.619 0.00 0.00 0.00 2.85
2553 5059 4.058817 GGTACACTCTGCTATGCCATTAC 58.941 47.826 0.00 0.00 0.00 1.89
2558 5092 1.269309 CGAGGTACACTCTGCTATGCC 60.269 57.143 0.00 0.00 44.33 4.40
2559 5093 1.866063 GCGAGGTACACTCTGCTATGC 60.866 57.143 14.52 6.19 44.33 3.14
2562 5096 0.392060 TCGCGAGGTACACTCTGCTA 60.392 55.000 3.71 9.87 44.33 3.49
2580 5114 9.173939 CCTTGATGTTTATGATAAAGCGATTTC 57.826 33.333 0.00 0.00 0.00 2.17
2585 5119 6.017605 AGCTCCTTGATGTTTATGATAAAGCG 60.018 38.462 0.00 0.00 0.00 4.68
2590 5124 7.568349 AGTTCAGCTCCTTGATGTTTATGATA 58.432 34.615 0.00 0.00 33.14 2.15
2592 5126 5.809001 AGTTCAGCTCCTTGATGTTTATGA 58.191 37.500 0.00 0.00 33.14 2.15
2594 5128 7.187824 TCTAGTTCAGCTCCTTGATGTTTAT 57.812 36.000 0.00 0.00 33.14 1.40
2595 5129 6.605471 TCTAGTTCAGCTCCTTGATGTTTA 57.395 37.500 0.00 0.00 33.14 2.01
2596 5130 5.489792 TCTAGTTCAGCTCCTTGATGTTT 57.510 39.130 0.00 0.00 33.14 2.83
2597 5131 5.690464 ATCTAGTTCAGCTCCTTGATGTT 57.310 39.130 0.00 0.00 33.14 2.71
2599 5554 6.183360 ACCTTATCTAGTTCAGCTCCTTGATG 60.183 42.308 10.02 0.00 0.00 3.07
2601 5556 5.273208 ACCTTATCTAGTTCAGCTCCTTGA 58.727 41.667 0.00 0.00 0.00 3.02
2608 5563 7.387948 TGAAAGTGAAACCTTATCTAGTTCAGC 59.612 37.037 0.00 0.00 37.80 4.26
2611 5566 9.052759 TGTTGAAAGTGAAACCTTATCTAGTTC 57.947 33.333 0.00 0.00 37.80 3.01
2614 5569 8.499162 CAGTGTTGAAAGTGAAACCTTATCTAG 58.501 37.037 0.00 0.00 37.80 2.43
2617 5572 7.012421 ACTCAGTGTTGAAAGTGAAACCTTATC 59.988 37.037 0.00 0.00 31.71 1.75
2625 5580 7.216494 TCATGATACTCAGTGTTGAAAGTGAA 58.784 34.615 0.00 0.00 31.69 3.18
2626 5581 6.758254 TCATGATACTCAGTGTTGAAAGTGA 58.242 36.000 0.00 0.00 31.69 3.41
2627 5582 7.606858 ATCATGATACTCAGTGTTGAAAGTG 57.393 36.000 6.36 0.00 31.69 3.16
2628 5583 9.896645 ATTATCATGATACTCAGTGTTGAAAGT 57.103 29.630 15.10 0.00 31.69 2.66
2630 5585 9.671279 ACATTATCATGATACTCAGTGTTGAAA 57.329 29.630 15.10 0.00 34.11 2.69
2639 5594 7.855784 ACCCAGTACATTATCATGATACTCA 57.144 36.000 15.10 1.43 34.11 3.41
2674 5629 3.343941 TTGCAGGGTTACTATGTGGTC 57.656 47.619 0.00 0.00 0.00 4.02
2675 5630 3.799432 TTTGCAGGGTTACTATGTGGT 57.201 42.857 0.00 0.00 0.00 4.16
2695 5650 7.549488 CGAGTCCTCCTTTACTATGTGATTTTT 59.451 37.037 0.00 0.00 0.00 1.94
2696 5651 7.042335 CGAGTCCTCCTTTACTATGTGATTTT 58.958 38.462 0.00 0.00 0.00 1.82
2729 5685 6.217294 GCATATAGTTCTCCAGTTCAGTACC 58.783 44.000 0.00 0.00 0.00 3.34
2742 5698 8.792830 ATTGGTATTTATGCGCATATAGTTCT 57.207 30.769 29.41 12.88 0.00 3.01
2753 5709 9.457110 TGCAAATTACTTATTGGTATTTATGCG 57.543 29.630 0.00 0.00 31.59 4.73
2782 5738 9.193133 CCAGTACATATATGTGTGCTTTACTAC 57.807 37.037 25.48 12.81 41.37 2.73
2784 5740 8.018537 TCCAGTACATATATGTGTGCTTTACT 57.981 34.615 25.48 16.51 41.37 2.24
2790 5746 6.691508 TGATCTCCAGTACATATATGTGTGC 58.308 40.000 25.48 13.25 41.89 4.57
2798 5757 6.835174 AGCAAACATGATCTCCAGTACATAT 58.165 36.000 0.00 0.00 0.00 1.78
2800 5759 5.108187 AGCAAACATGATCTCCAGTACAT 57.892 39.130 0.00 0.00 0.00 2.29
2802 5761 6.763135 TGATTAGCAAACATGATCTCCAGTAC 59.237 38.462 0.00 0.00 0.00 2.73
2804 5763 5.587844 GTGATTAGCAAACATGATCTCCAGT 59.412 40.000 0.00 0.00 0.00 4.00
2805 5764 5.008415 GGTGATTAGCAAACATGATCTCCAG 59.992 44.000 0.00 0.00 33.07 3.86
2806 5765 4.883585 GGTGATTAGCAAACATGATCTCCA 59.116 41.667 0.00 0.00 33.07 3.86
2807 5766 5.128919 AGGTGATTAGCAAACATGATCTCC 58.871 41.667 0.00 0.49 33.02 3.71
2918 7440 9.473007 TCCTGTTTATGATAAATTGACAATGGA 57.527 29.630 0.34 0.00 0.00 3.41
2966 7488 2.101640 AGTGCAGTTTGGGGGAAAAT 57.898 45.000 0.00 0.00 0.00 1.82
2972 7494 2.496899 ACTGATAGTGCAGTTTGGGG 57.503 50.000 0.00 0.00 46.42 4.96
2990 7512 4.634883 TCATACTGAAGACGGACTACAGAC 59.365 45.833 0.00 0.00 33.53 3.51
2994 7516 4.202020 TGCATCATACTGAAGACGGACTAC 60.202 45.833 0.00 0.00 0.00 2.73
3027 7600 1.811965 GCCCACAAAAATTGATTGCCC 59.188 47.619 4.58 0.00 0.00 5.36
3029 7602 2.485038 CAGGCCCACAAAAATTGATTGC 59.515 45.455 0.00 0.00 0.00 3.56
3033 7606 3.922171 AAACAGGCCCACAAAAATTGA 57.078 38.095 0.00 0.00 0.00 2.57
3051 7624 2.377531 GGGAGAACAGGGGAGGTAAAAA 59.622 50.000 0.00 0.00 0.00 1.94
3070 7644 3.024547 TGGACGATCTGAAGACTTAGGG 58.975 50.000 0.00 0.00 0.00 3.53
3074 7648 2.530701 AGGTGGACGATCTGAAGACTT 58.469 47.619 0.00 0.00 0.00 3.01
3075 7649 2.223803 AGGTGGACGATCTGAAGACT 57.776 50.000 0.00 0.00 0.00 3.24
3077 7651 3.165875 AGAAAGGTGGACGATCTGAAGA 58.834 45.455 0.00 0.00 0.00 2.87
3087 7661 3.057245 GGCTCATCAAAAGAAAGGTGGAC 60.057 47.826 0.00 0.00 0.00 4.02
3098 7672 2.036217 CTGCACCTTTGGCTCATCAAAA 59.964 45.455 0.00 0.00 36.37 2.44
3107 7681 2.935740 GCCTTCCTGCACCTTTGGC 61.936 63.158 0.00 0.00 0.00 4.52
3143 7717 6.138391 TCTGAATATGCATATGCCCCTTTA 57.862 37.500 24.54 5.39 41.18 1.85
3148 9156 5.474532 TCACTTTCTGAATATGCATATGCCC 59.525 40.000 24.54 12.26 41.18 5.36
3188 9196 6.197096 CACTGTGTTGTTCTGTTTGCTATTTC 59.803 38.462 0.00 0.00 0.00 2.17
3194 9202 2.094752 ACCACTGTGTTGTTCTGTTTGC 60.095 45.455 7.08 0.00 0.00 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.