Multiple sequence alignment - TraesCS1D01G020500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G020500 chr1D 100.000 2246 0 0 1 2246 8818525 8820770 0.000000e+00 4148.0
1 TraesCS1D01G020500 chr1D 91.892 74 6 0 1676 1749 9022760 9022687 1.100000e-18 104.0
2 TraesCS1D01G020500 chr1D 93.750 48 3 0 1441 1488 436604058 436604011 3.090000e-09 73.1
3 TraesCS1D01G020500 chr1A 91.113 1024 78 8 418 1439 10132254 10133266 0.000000e+00 1375.0
4 TraesCS1D01G020500 chr1A 90.732 669 55 6 722 1384 10214925 10214258 0.000000e+00 885.0
5 TraesCS1D01G020500 chr1A 87.332 671 64 14 67 730 10217006 10216350 0.000000e+00 749.0
6 TraesCS1D01G020500 chr1A 84.197 386 33 6 1497 1874 10133263 10133628 1.280000e-92 350.0
7 TraesCS1D01G020500 chr1A 94.366 71 3 1 1374 1444 10213510 10213441 8.480000e-20 108.0
8 TraesCS1D01G020500 chr1B 91.961 311 19 1 434 744 11983638 11983942 4.430000e-117 431.0
9 TraesCS1D01G020500 chr1B 90.000 190 18 1 135 323 11980044 11980233 6.200000e-61 244.0
10 TraesCS1D01G020500 chr1B 75.284 352 52 15 740 1086 12351850 12351529 3.890000e-28 135.0
11 TraesCS1D01G020500 chr6A 91.176 68 5 1 1 67 127615789 127615856 8.540000e-15 91.6
12 TraesCS1D01G020500 chr7D 95.918 49 2 0 1440 1488 28023683 28023731 1.850000e-11 80.5
13 TraesCS1D01G020500 chr7D 97.619 42 1 0 1440 1481 28023633 28023674 3.090000e-09 73.1
14 TraesCS1D01G020500 chr7D 91.837 49 4 0 1440 1488 87228035 87228083 4.000000e-08 69.4
15 TraesCS1D01G020500 chr4B 93.878 49 3 0 1440 1488 598259220 598259268 8.600000e-10 75.0
16 TraesCS1D01G020500 chr3B 86.111 72 6 3 1438 1505 586140004 586139933 8.600000e-10 75.0
17 TraesCS1D01G020500 chr5D 93.750 48 3 0 1441 1488 336454795 336454748 3.090000e-09 73.1
18 TraesCS1D01G020500 chr5D 91.667 48 4 0 1441 1488 8621815 8621768 1.440000e-07 67.6
19 TraesCS1D01G020500 chr6D 91.837 49 4 0 1440 1488 30573409 30573361 4.000000e-08 69.4
20 TraesCS1D01G020500 chr6D 100.000 28 0 0 1480 1507 454735662 454735635 4.000000e-03 52.8
21 TraesCS1D01G020500 chr5A 96.774 31 1 0 1480 1510 536878805 536878835 4.000000e-03 52.8
22 TraesCS1D01G020500 chr4A 96.774 31 1 0 1480 1510 686837544 686837574 4.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G020500 chr1D 8818525 8820770 2245 False 4148.000000 4148 100.0000 1 2246 1 chr1D.!!$F1 2245
1 TraesCS1D01G020500 chr1A 10132254 10133628 1374 False 862.500000 1375 87.6550 418 1874 2 chr1A.!!$F1 1456
2 TraesCS1D01G020500 chr1A 10213441 10217006 3565 True 580.666667 885 90.8100 67 1444 3 chr1A.!!$R1 1377
3 TraesCS1D01G020500 chr1B 11980044 11983942 3898 False 337.500000 431 90.9805 135 744 2 chr1B.!!$F1 609

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
609 3908 0.250338 AAGCAAGGACCCAGAACGTC 60.25 55.0 0.0 0.0 0.0 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2003 7511 0.032952 TGTCGCTAGTTTTCGTGGCT 59.967 50.0 0.0 0.0 0.0 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.816370 CGGTCTCTCGATTGAAGTCG 58.184 55.000 0.00 0.00 42.74 4.18
20 21 1.532090 CGGTCTCTCGATTGAAGTCGG 60.532 57.143 0.00 0.00 41.74 4.79
21 22 1.473278 GGTCTCTCGATTGAAGTCGGT 59.527 52.381 0.00 0.00 41.74 4.69
22 23 2.520979 GTCTCTCGATTGAAGTCGGTG 58.479 52.381 0.00 0.00 41.74 4.94
23 24 2.161808 GTCTCTCGATTGAAGTCGGTGA 59.838 50.000 0.00 0.00 41.74 4.02
24 25 3.017442 TCTCTCGATTGAAGTCGGTGAT 58.983 45.455 0.00 0.00 41.74 3.06
25 26 3.111838 CTCTCGATTGAAGTCGGTGATG 58.888 50.000 0.00 0.00 41.74 3.07
26 27 2.159240 TCTCGATTGAAGTCGGTGATGG 60.159 50.000 0.00 0.00 41.74 3.51
27 28 1.548719 TCGATTGAAGTCGGTGATGGT 59.451 47.619 0.00 0.00 41.74 3.55
28 29 2.028476 TCGATTGAAGTCGGTGATGGTT 60.028 45.455 0.00 0.00 41.74 3.67
29 30 2.094258 CGATTGAAGTCGGTGATGGTTG 59.906 50.000 0.00 0.00 37.94 3.77
30 31 1.234821 TTGAAGTCGGTGATGGTTGC 58.765 50.000 0.00 0.00 0.00 4.17
31 32 0.396435 TGAAGTCGGTGATGGTTGCT 59.604 50.000 0.00 0.00 0.00 3.91
32 33 1.202758 TGAAGTCGGTGATGGTTGCTT 60.203 47.619 0.00 0.00 0.00 3.91
33 34 1.880027 GAAGTCGGTGATGGTTGCTTT 59.120 47.619 0.00 0.00 0.00 3.51
34 35 2.851263 AGTCGGTGATGGTTGCTTTA 57.149 45.000 0.00 0.00 0.00 1.85
35 36 3.350219 AGTCGGTGATGGTTGCTTTAT 57.650 42.857 0.00 0.00 0.00 1.40
36 37 4.481368 AGTCGGTGATGGTTGCTTTATA 57.519 40.909 0.00 0.00 0.00 0.98
37 38 4.839121 AGTCGGTGATGGTTGCTTTATAA 58.161 39.130 0.00 0.00 0.00 0.98
38 39 5.437060 AGTCGGTGATGGTTGCTTTATAAT 58.563 37.500 0.00 0.00 0.00 1.28
39 40 6.588204 AGTCGGTGATGGTTGCTTTATAATA 58.412 36.000 0.00 0.00 0.00 0.98
40 41 7.224297 AGTCGGTGATGGTTGCTTTATAATAT 58.776 34.615 0.00 0.00 0.00 1.28
41 42 8.372459 AGTCGGTGATGGTTGCTTTATAATATA 58.628 33.333 0.00 0.00 0.00 0.86
42 43 8.995220 GTCGGTGATGGTTGCTTTATAATATAA 58.005 33.333 0.00 0.00 0.00 0.98
43 44 9.562408 TCGGTGATGGTTGCTTTATAATATAAA 57.438 29.630 5.46 5.46 0.00 1.40
63 64 9.942850 ATATAAAATGAGTGGAAACCCTTTTTG 57.057 29.630 0.00 0.00 0.00 2.44
64 65 4.687901 AATGAGTGGAAACCCTTTTTGG 57.312 40.909 0.00 0.00 0.00 3.28
65 66 3.108847 TGAGTGGAAACCCTTTTTGGT 57.891 42.857 0.00 0.00 41.55 3.67
76 77 7.038587 GGAAACCCTTTTTGGTATAATGGAAGT 60.039 37.037 0.00 0.00 37.76 3.01
78 79 5.186992 ACCCTTTTTGGTATAATGGAAGTGC 59.813 40.000 0.00 0.00 36.67 4.40
79 80 5.339990 CCTTTTTGGTATAATGGAAGTGCG 58.660 41.667 0.00 0.00 0.00 5.34
80 81 5.105917 CCTTTTTGGTATAATGGAAGTGCGT 60.106 40.000 0.00 0.00 0.00 5.24
90 92 1.507141 GGAAGTGCGTTGACCACTGG 61.507 60.000 0.00 0.00 42.37 4.00
93 95 0.814010 AGTGCGTTGACCACTGGAAC 60.814 55.000 0.71 0.00 41.68 3.62
104 106 2.644798 ACCACTGGAACTAGGAGCAATT 59.355 45.455 0.71 0.00 0.00 2.32
107 109 4.074970 CACTGGAACTAGGAGCAATTTGT 58.925 43.478 0.00 0.00 0.00 2.83
112 114 4.943705 GGAACTAGGAGCAATTTGTGATCA 59.056 41.667 0.00 0.00 44.87 2.92
122 124 7.063780 GGAGCAATTTGTGATCAAAATAGGTTG 59.936 37.037 0.00 4.59 44.87 3.77
188 191 3.363341 TTCGTCTGAAATGTTTTGGGC 57.637 42.857 0.00 0.00 0.00 5.36
217 220 5.734855 ATGAATTTTCCGTGATACTTCGG 57.265 39.130 0.00 0.00 46.93 4.30
259 263 4.514066 ACGACTGAAAACAAACCTGTATCC 59.486 41.667 0.00 0.00 33.45 2.59
317 321 6.422333 TCGGATATATCTTCTGCAGAGATCT 58.578 40.000 23.40 18.50 35.03 2.75
323 699 4.319139 TCTTCTGCAGAGATCTATGTGC 57.681 45.455 17.43 16.13 36.42 4.57
364 743 8.336235 TGATAAAAAGGACTTGGGATATCTTGT 58.664 33.333 2.05 0.00 0.00 3.16
384 763 5.862924 TGTTCTCCTAATTGCTTCTTTCG 57.137 39.130 0.00 0.00 0.00 3.46
416 795 3.710722 CGGCCACCTCCTTGCTCT 61.711 66.667 2.24 0.00 0.00 4.09
422 801 1.004044 CCACCTCCTTGCTCTGTTCAT 59.996 52.381 0.00 0.00 0.00 2.57
499 3798 2.171237 TCTCCACTACCGGAATAGTCGA 59.829 50.000 9.46 3.75 32.92 4.20
551 3850 1.986378 CATCTCGTCCACACGTTTCTC 59.014 52.381 0.00 0.00 46.76 2.87
609 3908 0.250338 AAGCAAGGACCCAGAACGTC 60.250 55.000 0.00 0.00 0.00 4.34
693 3992 6.783708 TCCACACAAACTAACCAAAAAGAT 57.216 33.333 0.00 0.00 0.00 2.40
712 4017 0.605319 TTGACAATGGAGGCGACCAC 60.605 55.000 8.46 0.00 43.03 4.16
797 5537 1.079073 AAACCAGGCCCATCCTTGG 59.921 57.895 0.00 0.95 44.75 3.61
817 5557 1.210478 GAAAGCATGAGGCCTCAGGTA 59.790 52.381 39.24 19.91 46.50 3.08
846 5586 1.014044 GCATTCGTTGTCCTCGCAGA 61.014 55.000 0.00 0.00 0.00 4.26
857 5597 4.103749 TCGCAGAGCTGTTCCTCT 57.896 55.556 0.00 0.00 42.75 3.69
874 5614 1.302832 CTCCCACAGCCAAGGTGAC 60.303 63.158 0.05 0.00 38.54 3.67
1042 5782 0.108585 ACTCGTGCACCAAGTCCAAT 59.891 50.000 12.15 0.00 0.00 3.16
1048 5788 0.251341 GCACCAAGTCCAATCCACCT 60.251 55.000 0.00 0.00 0.00 4.00
1056 5796 1.228831 CCAATCCACCTGGGTGCAA 60.229 57.895 13.79 5.10 44.16 4.08
1057 5797 0.831288 CCAATCCACCTGGGTGCAAA 60.831 55.000 13.79 2.78 44.16 3.68
1075 5815 5.627780 GTGCAAACGTTGGAATTACTTAAGG 59.372 40.000 6.92 0.00 30.97 2.69
1078 5818 6.293790 GCAAACGTTGGAATTACTTAAGGTCT 60.294 38.462 6.92 0.00 0.00 3.85
1079 5819 6.796705 AACGTTGGAATTACTTAAGGTCTG 57.203 37.500 7.53 0.00 0.00 3.51
1081 5821 5.221783 ACGTTGGAATTACTTAAGGTCTGGT 60.222 40.000 7.53 0.00 0.00 4.00
1082 5822 5.704053 CGTTGGAATTACTTAAGGTCTGGTT 59.296 40.000 7.53 0.00 0.00 3.67
1163 5904 2.433145 AGTGCACGACCGCATCAG 60.433 61.111 12.01 0.00 45.26 2.90
1246 5987 4.024218 GGATTGATGCGGAGAAGAAATGAG 60.024 45.833 0.00 0.00 0.00 2.90
1304 6045 6.624352 TCAAAATCTTCTCAGTTGAACCTG 57.376 37.500 0.00 0.00 0.00 4.00
1380 6881 1.992667 CTGTATCGTGTTCACGCACAT 59.007 47.619 22.24 14.18 39.19 3.21
1439 6940 6.768381 GGAGATGATTTAACTGGTTTAGGAGG 59.232 42.308 0.00 0.00 0.00 4.30
1441 6942 8.388656 AGATGATTTAACTGGTTTAGGAGGTA 57.611 34.615 0.00 0.00 0.00 3.08
1442 6943 8.265764 AGATGATTTAACTGGTTTAGGAGGTAC 58.734 37.037 0.00 0.00 0.00 3.34
1467 6968 8.862085 ACTCCCTCTGTAAACTTATATAAGAGC 58.138 37.037 25.83 13.66 37.08 4.09
1468 6969 8.777578 TCCCTCTGTAAACTTATATAAGAGCA 57.222 34.615 25.83 16.58 37.08 4.26
1469 6970 8.639761 TCCCTCTGTAAACTTATATAAGAGCAC 58.360 37.037 25.83 18.56 37.08 4.40
1470 6971 8.643324 CCCTCTGTAAACTTATATAAGAGCACT 58.357 37.037 25.83 3.40 37.08 4.40
1487 6988 7.889873 AGAGCACTTAGATCACTACATTAGT 57.110 36.000 0.00 0.00 40.28 2.24
1488 6989 8.299990 AGAGCACTTAGATCACTACATTAGTT 57.700 34.615 0.00 0.00 36.76 2.24
1489 6990 8.754080 AGAGCACTTAGATCACTACATTAGTTT 58.246 33.333 0.00 0.00 36.76 2.66
1491 6992 9.804758 AGCACTTAGATCACTACATTAGTTTAC 57.195 33.333 0.00 0.00 36.76 2.01
1492 6993 9.582431 GCACTTAGATCACTACATTAGTTTACA 57.418 33.333 0.00 0.00 36.76 2.41
1497 6998 8.012957 AGATCACTACATTAGTTTACAGAGGG 57.987 38.462 0.00 0.00 36.76 4.30
1498 6999 7.839705 AGATCACTACATTAGTTTACAGAGGGA 59.160 37.037 0.00 0.00 36.76 4.20
1499 7000 7.406031 TCACTACATTAGTTTACAGAGGGAG 57.594 40.000 0.00 0.00 36.76 4.30
1500 7001 6.952358 TCACTACATTAGTTTACAGAGGGAGT 59.048 38.462 0.00 0.00 36.76 3.85
1510 7011 7.849160 AGTTTACAGAGGGAGTACTATTTTCC 58.151 38.462 0.00 0.00 0.00 3.13
1520 7021 6.713450 GGGAGTACTATTTTCCAGTTGACAAA 59.287 38.462 0.00 0.00 32.50 2.83
1521 7022 7.094762 GGGAGTACTATTTTCCAGTTGACAAAG 60.095 40.741 0.00 0.00 32.50 2.77
1522 7023 7.444487 GGAGTACTATTTTCCAGTTGACAAAGT 59.556 37.037 0.00 0.00 0.00 2.66
1523 7024 8.379457 AGTACTATTTTCCAGTTGACAAAGTC 57.621 34.615 0.00 0.00 0.00 3.01
1524 7025 8.211629 AGTACTATTTTCCAGTTGACAAAGTCT 58.788 33.333 0.00 0.00 33.15 3.24
1525 7026 9.485206 GTACTATTTTCCAGTTGACAAAGTCTA 57.515 33.333 0.00 0.00 33.15 2.59
1526 7027 8.379457 ACTATTTTCCAGTTGACAAAGTCTAC 57.621 34.615 4.02 4.02 38.25 2.59
1527 7028 7.990886 ACTATTTTCCAGTTGACAAAGTCTACA 59.009 33.333 12.72 0.00 39.86 2.74
1528 7029 7.823745 ATTTTCCAGTTGACAAAGTCTACAT 57.176 32.000 12.72 0.00 39.86 2.29
1532 7036 6.455647 TCCAGTTGACAAAGTCTACATACAG 58.544 40.000 12.72 0.00 39.86 2.74
1534 7038 6.455647 CAGTTGACAAAGTCTACATACAGGA 58.544 40.000 12.72 0.00 39.86 3.86
1543 7047 9.219603 CAAAGTCTACATACAGGAAAAATCTCA 57.780 33.333 0.00 0.00 0.00 3.27
1610 7114 5.244755 TGTATTTAACCTCACGTTTACCCC 58.755 41.667 0.00 0.00 35.79 4.95
1611 7115 4.645863 ATTTAACCTCACGTTTACCCCT 57.354 40.909 0.00 0.00 35.79 4.79
1614 7118 3.622166 AACCTCACGTTTACCCCTATG 57.378 47.619 0.00 0.00 0.00 2.23
1634 7142 2.226200 TGGATGTTCACTGATTTGTGCG 59.774 45.455 0.00 0.00 37.81 5.34
1643 7151 7.114670 TGTTCACTGATTTGTGCGAAATTTATG 59.885 33.333 0.00 0.00 37.81 1.90
1723 7231 1.133606 ACGGATGTGGAACCCAAGTTT 60.134 47.619 0.00 0.00 35.94 2.66
1725 7233 1.000843 GGATGTGGAACCCAAGTTTGC 59.999 52.381 0.00 0.00 35.94 3.68
1728 7236 1.205893 TGTGGAACCCAAGTTTGCAAC 59.794 47.619 0.00 0.00 35.94 4.17
1729 7237 1.205893 GTGGAACCCAAGTTTGCAACA 59.794 47.619 0.00 0.00 35.94 3.33
1732 7240 3.054802 TGGAACCCAAGTTTGCAACATTT 60.055 39.130 0.00 0.00 35.94 2.32
1733 7241 3.944650 GGAACCCAAGTTTGCAACATTTT 59.055 39.130 0.00 0.00 35.94 1.82
1766 7274 6.594937 AGGTGTACTTAACGAACAAAGTTTGA 59.405 34.615 22.23 0.00 37.19 2.69
1767 7275 7.281549 AGGTGTACTTAACGAACAAAGTTTGAT 59.718 33.333 22.23 10.54 37.19 2.57
1774 7282 6.687081 AACGAACAAAGTTTGATAGGTTGA 57.313 33.333 22.23 0.00 0.00 3.18
1775 7283 6.056428 ACGAACAAAGTTTGATAGGTTGAC 57.944 37.500 22.23 0.00 0.00 3.18
1776 7284 5.587043 ACGAACAAAGTTTGATAGGTTGACA 59.413 36.000 22.23 0.00 0.00 3.58
1777 7285 5.907391 CGAACAAAGTTTGATAGGTTGACAC 59.093 40.000 22.23 0.00 0.00 3.67
1778 7286 6.457663 CGAACAAAGTTTGATAGGTTGACACA 60.458 38.462 22.23 0.00 0.00 3.72
1779 7287 6.959639 ACAAAGTTTGATAGGTTGACACAT 57.040 33.333 22.23 0.00 0.00 3.21
1780 7288 6.738114 ACAAAGTTTGATAGGTTGACACATG 58.262 36.000 22.23 0.00 0.00 3.21
1781 7289 5.964958 AAGTTTGATAGGTTGACACATGG 57.035 39.130 0.00 0.00 0.00 3.66
1782 7290 3.758554 AGTTTGATAGGTTGACACATGGC 59.241 43.478 0.00 0.00 0.00 4.40
1783 7291 3.431673 TTGATAGGTTGACACATGGCA 57.568 42.857 0.00 0.00 0.00 4.92
1784 7292 3.431673 TGATAGGTTGACACATGGCAA 57.568 42.857 0.00 0.00 41.52 4.52
1785 7293 3.760738 TGATAGGTTGACACATGGCAAA 58.239 40.909 0.63 0.00 45.92 3.68
1786 7294 4.148079 TGATAGGTTGACACATGGCAAAA 58.852 39.130 0.63 0.00 45.92 2.44
1787 7295 2.888834 AGGTTGACACATGGCAAAAC 57.111 45.000 0.63 0.00 45.92 2.43
1788 7296 2.106566 AGGTTGACACATGGCAAAACA 58.893 42.857 0.63 0.00 45.92 2.83
1789 7297 2.159114 AGGTTGACACATGGCAAAACAC 60.159 45.455 0.63 0.00 45.92 3.32
1790 7298 2.417924 GGTTGACACATGGCAAAACACA 60.418 45.455 0.63 0.00 45.92 3.72
1791 7299 3.456280 GTTGACACATGGCAAAACACAT 58.544 40.909 0.63 0.00 45.92 3.21
1792 7300 4.500545 GGTTGACACATGGCAAAACACATA 60.501 41.667 0.63 0.00 45.92 2.29
1793 7301 5.229423 GTTGACACATGGCAAAACACATAT 58.771 37.500 0.63 0.00 45.92 1.78
1829 7337 2.033801 GGCTATGTTGTGCCTATGCTTG 59.966 50.000 0.00 0.00 45.26 4.01
1835 7343 1.812235 TGTGCCTATGCTTGAGTGTG 58.188 50.000 0.00 0.00 38.71 3.82
1846 7354 1.466167 CTTGAGTGTGGCTTCCGATTG 59.534 52.381 0.00 0.00 0.00 2.67
1849 7357 1.303317 GTGTGGCTTCCGATTGGGT 60.303 57.895 0.00 0.00 37.00 4.51
1852 7360 0.526211 GTGGCTTCCGATTGGGTTTC 59.474 55.000 0.00 0.00 37.00 2.78
1861 7369 2.752354 CCGATTGGGTTTCATAAGTGCA 59.248 45.455 0.00 0.00 0.00 4.57
1874 7382 2.566833 AAGTGCATGAGTGTGGCTTA 57.433 45.000 0.00 0.00 0.00 3.09
1875 7383 2.795231 AGTGCATGAGTGTGGCTTAT 57.205 45.000 0.00 0.00 0.00 1.73
1876 7384 3.077484 AGTGCATGAGTGTGGCTTATT 57.923 42.857 0.00 0.00 0.00 1.40
1877 7385 3.424703 AGTGCATGAGTGTGGCTTATTT 58.575 40.909 0.00 0.00 0.00 1.40
1878 7386 3.828451 AGTGCATGAGTGTGGCTTATTTT 59.172 39.130 0.00 0.00 0.00 1.82
1879 7387 4.281688 AGTGCATGAGTGTGGCTTATTTTT 59.718 37.500 0.00 0.00 0.00 1.94
1903 7411 7.546778 TTTCCTTTTTCTTTTTCCGAAATGG 57.453 32.000 0.00 0.00 40.09 3.16
1904 7412 5.606505 TCCTTTTTCTTTTTCCGAAATGGG 58.393 37.500 0.00 0.00 38.76 4.00
1905 7413 4.754618 CCTTTTTCTTTTTCCGAAATGGGG 59.245 41.667 0.00 0.00 38.76 4.96
1906 7414 4.344359 TTTTCTTTTTCCGAAATGGGGG 57.656 40.909 0.00 0.00 38.76 5.40
1907 7415 2.982339 TCTTTTTCCGAAATGGGGGA 57.018 45.000 0.00 0.00 38.76 4.81
1908 7416 3.246416 TCTTTTTCCGAAATGGGGGAA 57.754 42.857 0.00 0.00 40.44 3.97
1909 7417 3.161866 TCTTTTTCCGAAATGGGGGAAG 58.838 45.455 0.00 0.00 42.85 3.46
1910 7418 2.982339 TTTTCCGAAATGGGGGAAGA 57.018 45.000 0.00 0.00 42.85 2.87
1911 7419 3.466395 TTTTCCGAAATGGGGGAAGAT 57.534 42.857 0.00 0.00 42.85 2.40
1912 7420 2.729028 TTCCGAAATGGGGGAAGATC 57.271 50.000 0.00 0.00 37.40 2.75
1913 7421 0.468226 TCCGAAATGGGGGAAGATCG 59.532 55.000 0.00 0.00 38.76 3.69
1914 7422 1.166531 CCGAAATGGGGGAAGATCGC 61.167 60.000 0.00 0.00 0.00 4.58
1923 7431 4.610714 GAAGATCGCCCCGCCCTC 62.611 72.222 0.00 0.00 0.00 4.30
1932 7440 4.113815 CCCGCCCTCAGCATCCAA 62.114 66.667 0.00 0.00 44.04 3.53
1933 7441 2.515523 CCGCCCTCAGCATCCAAG 60.516 66.667 0.00 0.00 44.04 3.61
1934 7442 2.586245 CGCCCTCAGCATCCAAGA 59.414 61.111 0.00 0.00 44.04 3.02
1935 7443 1.523258 CGCCCTCAGCATCCAAGAG 60.523 63.158 0.00 0.00 44.04 2.85
1936 7444 1.910722 GCCCTCAGCATCCAAGAGA 59.089 57.895 0.00 0.00 42.97 3.10
1937 7445 0.473326 GCCCTCAGCATCCAAGAGAT 59.527 55.000 0.00 0.00 42.97 2.75
1947 7455 3.841643 CATCCAAGAGATGCACAAAACC 58.158 45.455 0.00 0.00 45.76 3.27
1948 7456 3.228188 TCCAAGAGATGCACAAAACCT 57.772 42.857 0.00 0.00 0.00 3.50
1949 7457 3.565307 TCCAAGAGATGCACAAAACCTT 58.435 40.909 0.00 0.00 0.00 3.50
1950 7458 3.960102 TCCAAGAGATGCACAAAACCTTT 59.040 39.130 0.00 0.00 0.00 3.11
1951 7459 4.405358 TCCAAGAGATGCACAAAACCTTTT 59.595 37.500 0.00 0.00 0.00 2.27
1952 7460 5.104982 TCCAAGAGATGCACAAAACCTTTTT 60.105 36.000 0.00 0.00 0.00 1.94
1953 7461 6.097554 TCCAAGAGATGCACAAAACCTTTTTA 59.902 34.615 0.00 0.00 0.00 1.52
1954 7462 6.930722 CCAAGAGATGCACAAAACCTTTTTAT 59.069 34.615 0.00 0.00 0.00 1.40
1955 7463 7.442062 CCAAGAGATGCACAAAACCTTTTTATT 59.558 33.333 0.00 0.00 0.00 1.40
1956 7464 9.474920 CAAGAGATGCACAAAACCTTTTTATTA 57.525 29.630 0.00 0.00 0.00 0.98
1957 7465 9.696917 AAGAGATGCACAAAACCTTTTTATTAG 57.303 29.630 0.00 0.00 0.00 1.73
1958 7466 9.077885 AGAGATGCACAAAACCTTTTTATTAGA 57.922 29.630 0.00 0.00 0.00 2.10
1959 7467 9.860898 GAGATGCACAAAACCTTTTTATTAGAT 57.139 29.630 0.00 0.00 0.00 1.98
1972 7480 9.736023 CCTTTTTATTAGATTATTCACAGCACC 57.264 33.333 0.00 0.00 0.00 5.01
1978 7486 8.668510 ATTAGATTATTCACAGCACCTTACAG 57.331 34.615 0.00 0.00 0.00 2.74
1979 7487 5.431765 AGATTATTCACAGCACCTTACAGG 58.568 41.667 0.00 0.00 42.49 4.00
1980 7488 4.901197 TTATTCACAGCACCTTACAGGA 57.099 40.909 0.00 0.00 37.67 3.86
1981 7489 2.839486 TTCACAGCACCTTACAGGAG 57.161 50.000 0.00 0.00 37.67 3.69
1982 7490 0.976641 TCACAGCACCTTACAGGAGG 59.023 55.000 0.00 0.00 37.67 4.30
1983 7491 0.976641 CACAGCACCTTACAGGAGGA 59.023 55.000 0.00 0.00 37.67 3.71
1984 7492 1.347707 CACAGCACCTTACAGGAGGAA 59.652 52.381 0.00 0.00 37.67 3.36
1985 7493 2.026822 CACAGCACCTTACAGGAGGAAT 60.027 50.000 0.00 0.00 37.67 3.01
1986 7494 2.644798 ACAGCACCTTACAGGAGGAATT 59.355 45.455 0.00 0.00 37.67 2.17
1987 7495 3.844211 ACAGCACCTTACAGGAGGAATTA 59.156 43.478 0.00 0.00 37.67 1.40
1988 7496 4.192317 CAGCACCTTACAGGAGGAATTAC 58.808 47.826 0.00 0.00 37.67 1.89
1989 7497 3.844211 AGCACCTTACAGGAGGAATTACA 59.156 43.478 0.00 0.00 37.67 2.41
1990 7498 4.288626 AGCACCTTACAGGAGGAATTACAA 59.711 41.667 0.00 0.00 37.67 2.41
1991 7499 5.007682 GCACCTTACAGGAGGAATTACAAA 58.992 41.667 0.00 0.00 37.67 2.83
1992 7500 5.123979 GCACCTTACAGGAGGAATTACAAAG 59.876 44.000 0.00 0.00 37.67 2.77
1993 7501 6.472887 CACCTTACAGGAGGAATTACAAAGA 58.527 40.000 0.00 0.00 37.67 2.52
1994 7502 7.112779 CACCTTACAGGAGGAATTACAAAGAT 58.887 38.462 0.00 0.00 37.67 2.40
1995 7503 7.281100 CACCTTACAGGAGGAATTACAAAGATC 59.719 40.741 0.00 0.00 37.67 2.75
1996 7504 7.037586 ACCTTACAGGAGGAATTACAAAGATCA 60.038 37.037 0.00 0.00 37.67 2.92
1997 7505 7.497249 CCTTACAGGAGGAATTACAAAGATCAG 59.503 40.741 0.00 0.00 37.67 2.90
1998 7506 5.749462 ACAGGAGGAATTACAAAGATCAGG 58.251 41.667 0.00 0.00 0.00 3.86
1999 7507 4.578105 CAGGAGGAATTACAAAGATCAGGC 59.422 45.833 0.00 0.00 0.00 4.85
2000 7508 3.885901 GGAGGAATTACAAAGATCAGGCC 59.114 47.826 0.00 0.00 0.00 5.19
2001 7509 3.545703 AGGAATTACAAAGATCAGGCCG 58.454 45.455 0.00 0.00 0.00 6.13
2002 7510 3.199946 AGGAATTACAAAGATCAGGCCGA 59.800 43.478 0.00 0.00 0.00 5.54
2003 7511 3.945285 GGAATTACAAAGATCAGGCCGAA 59.055 43.478 0.00 0.00 0.00 4.30
2004 7512 4.035675 GGAATTACAAAGATCAGGCCGAAG 59.964 45.833 0.00 0.00 0.00 3.79
2005 7513 2.024176 TACAAAGATCAGGCCGAAGC 57.976 50.000 0.00 0.00 38.76 3.86
2015 7523 3.340789 GCCGAAGCCACGAAAACT 58.659 55.556 0.00 0.00 35.09 2.66
2016 7524 2.535588 GCCGAAGCCACGAAAACTA 58.464 52.632 0.00 0.00 35.09 2.24
2017 7525 0.442699 GCCGAAGCCACGAAAACTAG 59.557 55.000 0.00 0.00 35.09 2.57
2018 7526 0.442699 CCGAAGCCACGAAAACTAGC 59.557 55.000 0.00 0.00 35.09 3.42
2019 7527 0.093026 CGAAGCCACGAAAACTAGCG 59.907 55.000 0.00 0.00 35.09 4.26
2020 7528 1.425412 GAAGCCACGAAAACTAGCGA 58.575 50.000 0.00 0.00 0.00 4.93
2021 7529 1.126296 GAAGCCACGAAAACTAGCGAC 59.874 52.381 0.00 0.00 0.00 5.19
2022 7530 0.032952 AGCCACGAAAACTAGCGACA 59.967 50.000 0.00 0.00 0.00 4.35
2023 7531 0.438830 GCCACGAAAACTAGCGACAG 59.561 55.000 0.00 0.00 0.00 3.51
2024 7532 0.438830 CCACGAAAACTAGCGACAGC 59.561 55.000 0.00 0.00 45.58 4.40
2037 7545 2.323939 CGACAGCTCGCTAATCCTAG 57.676 55.000 0.00 0.00 31.91 3.02
2038 7546 1.874231 CGACAGCTCGCTAATCCTAGA 59.126 52.381 0.00 0.00 31.91 2.43
2039 7547 2.095969 CGACAGCTCGCTAATCCTAGAG 60.096 54.545 0.00 0.00 31.91 2.43
2046 7554 5.637006 CTCGCTAATCCTAGAGCACTTAT 57.363 43.478 0.00 0.00 38.69 1.73
2047 7555 5.378292 TCGCTAATCCTAGAGCACTTATG 57.622 43.478 0.00 0.00 38.69 1.90
2048 7556 5.070685 TCGCTAATCCTAGAGCACTTATGA 58.929 41.667 0.00 0.00 38.69 2.15
2049 7557 5.535030 TCGCTAATCCTAGAGCACTTATGAA 59.465 40.000 0.00 0.00 38.69 2.57
2050 7558 5.861251 CGCTAATCCTAGAGCACTTATGAAG 59.139 44.000 0.00 0.00 38.69 3.02
2051 7559 6.162777 GCTAATCCTAGAGCACTTATGAAGG 58.837 44.000 0.00 0.00 38.62 3.46
2052 7560 4.615588 ATCCTAGAGCACTTATGAAGGC 57.384 45.455 0.00 0.00 0.00 4.35
2053 7561 3.374764 TCCTAGAGCACTTATGAAGGCA 58.625 45.455 0.00 0.00 0.00 4.75
2054 7562 3.133003 TCCTAGAGCACTTATGAAGGCAC 59.867 47.826 0.00 0.00 0.00 5.01
2055 7563 2.015736 AGAGCACTTATGAAGGCACG 57.984 50.000 0.00 0.00 0.00 5.34
2056 7564 1.550524 AGAGCACTTATGAAGGCACGA 59.449 47.619 0.00 0.00 0.00 4.35
2057 7565 1.929836 GAGCACTTATGAAGGCACGAG 59.070 52.381 0.00 0.00 0.00 4.18
2058 7566 1.276421 AGCACTTATGAAGGCACGAGT 59.724 47.619 0.00 0.00 0.00 4.18
2059 7567 1.661112 GCACTTATGAAGGCACGAGTC 59.339 52.381 0.00 0.00 0.00 3.36
2060 7568 1.920574 CACTTATGAAGGCACGAGTCG 59.079 52.381 11.85 11.85 0.00 4.18
2061 7569 1.544691 ACTTATGAAGGCACGAGTCGT 59.455 47.619 13.56 13.56 42.36 4.34
2062 7570 2.186076 CTTATGAAGGCACGAGTCGTC 58.814 52.381 16.86 10.65 38.32 4.20
2075 7583 2.795117 GAGTCGTCGAATAGGACCAAC 58.205 52.381 0.00 0.00 42.74 3.77
2076 7584 2.163010 GAGTCGTCGAATAGGACCAACA 59.837 50.000 0.00 0.00 42.74 3.33
2077 7585 2.094854 AGTCGTCGAATAGGACCAACAC 60.095 50.000 0.00 0.00 42.74 3.32
2078 7586 1.203052 TCGTCGAATAGGACCAACACC 59.797 52.381 0.00 0.00 33.30 4.16
2079 7587 1.738030 CGTCGAATAGGACCAACACCC 60.738 57.143 0.00 0.00 33.30 4.61
2080 7588 1.553704 GTCGAATAGGACCAACACCCT 59.446 52.381 0.00 0.00 36.60 4.34
2081 7589 1.553248 TCGAATAGGACCAACACCCTG 59.447 52.381 0.00 0.00 34.11 4.45
2082 7590 1.553248 CGAATAGGACCAACACCCTGA 59.447 52.381 0.00 0.00 34.11 3.86
2083 7591 2.677037 CGAATAGGACCAACACCCTGAC 60.677 54.545 0.00 0.00 34.11 3.51
2084 7592 2.038863 ATAGGACCAACACCCTGACA 57.961 50.000 0.00 0.00 34.11 3.58
2085 7593 2.038863 TAGGACCAACACCCTGACAT 57.961 50.000 0.00 0.00 34.11 3.06
2086 7594 2.038863 AGGACCAACACCCTGACATA 57.961 50.000 0.00 0.00 0.00 2.29
2087 7595 2.344592 AGGACCAACACCCTGACATAA 58.655 47.619 0.00 0.00 0.00 1.90
2088 7596 2.039879 AGGACCAACACCCTGACATAAC 59.960 50.000 0.00 0.00 0.00 1.89
2089 7597 2.224670 GGACCAACACCCTGACATAACA 60.225 50.000 0.00 0.00 0.00 2.41
2090 7598 3.482436 GACCAACACCCTGACATAACAA 58.518 45.455 0.00 0.00 0.00 2.83
2091 7599 3.219281 ACCAACACCCTGACATAACAAC 58.781 45.455 0.00 0.00 0.00 3.32
2092 7600 3.218453 CCAACACCCTGACATAACAACA 58.782 45.455 0.00 0.00 0.00 3.33
2093 7601 3.634448 CCAACACCCTGACATAACAACAA 59.366 43.478 0.00 0.00 0.00 2.83
2094 7602 4.499019 CCAACACCCTGACATAACAACAAC 60.499 45.833 0.00 0.00 0.00 3.32
2095 7603 2.875933 ACACCCTGACATAACAACAACG 59.124 45.455 0.00 0.00 0.00 4.10
2096 7604 2.875933 CACCCTGACATAACAACAACGT 59.124 45.455 0.00 0.00 0.00 3.99
2097 7605 2.875933 ACCCTGACATAACAACAACGTG 59.124 45.455 0.00 0.00 0.00 4.49
2098 7606 2.350388 CCCTGACATAACAACAACGTGC 60.350 50.000 0.00 0.00 0.00 5.34
2099 7607 2.350388 CCTGACATAACAACAACGTGCC 60.350 50.000 0.00 0.00 0.00 5.01
2100 7608 2.548057 CTGACATAACAACAACGTGCCT 59.452 45.455 0.00 0.00 0.00 4.75
2101 7609 2.546368 TGACATAACAACAACGTGCCTC 59.454 45.455 0.00 0.00 0.00 4.70
2102 7610 2.546368 GACATAACAACAACGTGCCTCA 59.454 45.455 0.00 0.00 0.00 3.86
2103 7611 3.146066 ACATAACAACAACGTGCCTCAT 58.854 40.909 0.00 0.00 0.00 2.90
2104 7612 3.188460 ACATAACAACAACGTGCCTCATC 59.812 43.478 0.00 0.00 0.00 2.92
2105 7613 1.967319 AACAACAACGTGCCTCATCT 58.033 45.000 0.00 0.00 0.00 2.90
2106 7614 2.831685 ACAACAACGTGCCTCATCTA 57.168 45.000 0.00 0.00 0.00 1.98
2107 7615 3.120321 ACAACAACGTGCCTCATCTAA 57.880 42.857 0.00 0.00 0.00 2.10
2108 7616 3.472652 ACAACAACGTGCCTCATCTAAA 58.527 40.909 0.00 0.00 0.00 1.85
2109 7617 3.880490 ACAACAACGTGCCTCATCTAAAA 59.120 39.130 0.00 0.00 0.00 1.52
2110 7618 4.336993 ACAACAACGTGCCTCATCTAAAAA 59.663 37.500 0.00 0.00 0.00 1.94
2111 7619 4.483476 ACAACGTGCCTCATCTAAAAAC 57.517 40.909 0.00 0.00 0.00 2.43
2112 7620 3.880490 ACAACGTGCCTCATCTAAAAACA 59.120 39.130 0.00 0.00 0.00 2.83
2113 7621 4.024048 ACAACGTGCCTCATCTAAAAACAG 60.024 41.667 0.00 0.00 0.00 3.16
2114 7622 4.002906 ACGTGCCTCATCTAAAAACAGA 57.997 40.909 0.00 0.00 0.00 3.41
2115 7623 4.385825 ACGTGCCTCATCTAAAAACAGAA 58.614 39.130 0.00 0.00 0.00 3.02
2116 7624 4.819630 ACGTGCCTCATCTAAAAACAGAAA 59.180 37.500 0.00 0.00 0.00 2.52
2117 7625 5.049405 ACGTGCCTCATCTAAAAACAGAAAG 60.049 40.000 0.00 0.00 0.00 2.62
2118 7626 5.157067 GTGCCTCATCTAAAAACAGAAAGC 58.843 41.667 0.00 0.00 0.00 3.51
2119 7627 4.218417 TGCCTCATCTAAAAACAGAAAGCC 59.782 41.667 0.00 0.00 0.00 4.35
2120 7628 4.460731 GCCTCATCTAAAAACAGAAAGCCT 59.539 41.667 0.00 0.00 0.00 4.58
2121 7629 5.392487 GCCTCATCTAAAAACAGAAAGCCTC 60.392 44.000 0.00 0.00 0.00 4.70
2122 7630 5.163814 CCTCATCTAAAAACAGAAAGCCTCG 60.164 44.000 0.00 0.00 0.00 4.63
2123 7631 4.695455 TCATCTAAAAACAGAAAGCCTCGG 59.305 41.667 0.00 0.00 0.00 4.63
2124 7632 2.812011 TCTAAAAACAGAAAGCCTCGGC 59.188 45.455 0.00 0.00 42.33 5.54
2125 7633 0.673985 AAAAACAGAAAGCCTCGGCC 59.326 50.000 3.92 0.00 43.17 6.13
2126 7634 0.467290 AAAACAGAAAGCCTCGGCCA 60.467 50.000 2.24 0.00 43.17 5.36
2127 7635 0.890996 AAACAGAAAGCCTCGGCCAG 60.891 55.000 2.24 0.00 43.17 4.85
2128 7636 3.130160 CAGAAAGCCTCGGCCAGC 61.130 66.667 2.24 1.61 43.17 4.85
2129 7637 3.640407 AGAAAGCCTCGGCCAGCA 61.640 61.111 2.24 0.00 43.17 4.41
2130 7638 3.130160 GAAAGCCTCGGCCAGCAG 61.130 66.667 2.24 0.00 43.17 4.24
2151 7659 3.216292 GCAAGTGGCACAACCGGT 61.216 61.111 21.41 0.00 44.16 5.28
2152 7660 3.030652 CAAGTGGCACAACCGGTC 58.969 61.111 21.41 0.00 44.16 4.79
2153 7661 2.203294 AAGTGGCACAACCGGTCC 60.203 61.111 21.41 5.07 44.16 4.46
2154 7662 4.619227 AGTGGCACAACCGGTCCG 62.619 66.667 21.41 3.60 44.16 4.79
2155 7663 4.612412 GTGGCACAACCGGTCCGA 62.612 66.667 14.39 0.00 44.16 4.55
2156 7664 4.612412 TGGCACAACCGGTCCGAC 62.612 66.667 14.39 1.27 43.94 4.79
2157 7665 4.612412 GGCACAACCGGTCCGACA 62.612 66.667 14.39 0.00 0.00 4.35
2158 7666 3.041940 GCACAACCGGTCCGACAG 61.042 66.667 14.39 3.98 0.00 3.51
2159 7667 2.732016 CACAACCGGTCCGACAGA 59.268 61.111 14.39 0.00 0.00 3.41
2160 7668 1.663702 CACAACCGGTCCGACAGAC 60.664 63.158 14.39 0.00 45.51 3.51
2167 7675 4.472702 GTCCGACAGACCGTTAGC 57.527 61.111 0.00 0.00 39.84 3.09
2168 7676 1.513586 GTCCGACAGACCGTTAGCG 60.514 63.158 0.00 0.00 39.84 4.26
2169 7677 2.879462 CCGACAGACCGTTAGCGC 60.879 66.667 0.00 0.00 36.67 5.92
2170 7678 2.126618 CGACAGACCGTTAGCGCA 60.127 61.111 11.47 0.00 36.67 6.09
2171 7679 1.516386 CGACAGACCGTTAGCGCAT 60.516 57.895 11.47 0.00 36.67 4.73
2172 7680 0.248336 CGACAGACCGTTAGCGCATA 60.248 55.000 11.47 0.00 36.67 3.14
2173 7681 1.197910 GACAGACCGTTAGCGCATAC 58.802 55.000 11.47 5.94 36.67 2.39
2174 7682 0.179119 ACAGACCGTTAGCGCATACC 60.179 55.000 11.47 0.00 36.67 2.73
2175 7683 1.065273 AGACCGTTAGCGCATACCG 59.935 57.895 11.47 5.95 40.75 4.02
2176 7684 1.947642 GACCGTTAGCGCATACCGG 60.948 63.158 21.07 21.07 44.06 5.28
2177 7685 3.335534 CCGTTAGCGCATACCGGC 61.336 66.667 11.47 0.00 37.44 6.13
2197 7705 3.743567 CGTACACGCTCTAGAAGTCTT 57.256 47.619 0.00 0.00 0.00 3.01
2198 7706 3.672310 CGTACACGCTCTAGAAGTCTTC 58.328 50.000 4.26 4.26 0.00 2.87
2199 7707 2.904011 ACACGCTCTAGAAGTCTTCG 57.096 50.000 6.94 0.00 34.02 3.79
2200 7708 1.135632 ACACGCTCTAGAAGTCTTCGC 60.136 52.381 6.94 3.84 34.02 4.70
2201 7709 0.452585 ACGCTCTAGAAGTCTTCGCC 59.547 55.000 6.94 0.00 34.02 5.54
2202 7710 0.590230 CGCTCTAGAAGTCTTCGCCG 60.590 60.000 6.94 3.62 34.02 6.46
2203 7711 0.868177 GCTCTAGAAGTCTTCGCCGC 60.868 60.000 6.94 5.42 34.02 6.53
2204 7712 0.248702 CTCTAGAAGTCTTCGCCGCC 60.249 60.000 6.94 0.00 34.02 6.13
2205 7713 1.586564 CTAGAAGTCTTCGCCGCCG 60.587 63.158 6.94 0.00 34.02 6.46
2206 7714 3.695022 TAGAAGTCTTCGCCGCCGC 62.695 63.158 6.94 0.00 34.02 6.53
2219 7727 2.899838 GCCGCCATGTTCCGCATA 60.900 61.111 0.00 0.00 35.74 3.14
2220 7728 3.022287 CCGCCATGTTCCGCATAC 58.978 61.111 0.00 0.00 35.74 2.39
2221 7729 1.817520 CCGCCATGTTCCGCATACA 60.818 57.895 0.00 0.00 35.74 2.29
2222 7730 1.351707 CGCCATGTTCCGCATACAC 59.648 57.895 0.00 0.00 35.74 2.90
2223 7731 1.365368 CGCCATGTTCCGCATACACA 61.365 55.000 0.00 0.00 35.74 3.72
2224 7732 1.024271 GCCATGTTCCGCATACACAT 58.976 50.000 0.00 0.00 35.74 3.21
2225 7733 1.002468 GCCATGTTCCGCATACACATC 60.002 52.381 0.00 0.00 35.74 3.06
2226 7734 2.564771 CCATGTTCCGCATACACATCT 58.435 47.619 0.00 0.00 35.74 2.90
2227 7735 2.945008 CCATGTTCCGCATACACATCTT 59.055 45.455 0.00 0.00 35.74 2.40
2228 7736 3.242837 CCATGTTCCGCATACACATCTTG 60.243 47.826 0.00 0.00 35.74 3.02
2229 7737 3.326836 TGTTCCGCATACACATCTTGA 57.673 42.857 0.00 0.00 0.00 3.02
2230 7738 3.261580 TGTTCCGCATACACATCTTGAG 58.738 45.455 0.00 0.00 0.00 3.02
2231 7739 2.602257 TCCGCATACACATCTTGAGG 57.398 50.000 0.00 0.00 0.00 3.86
2232 7740 2.107366 TCCGCATACACATCTTGAGGA 58.893 47.619 0.00 0.00 37.06 3.71
2233 7741 2.499693 TCCGCATACACATCTTGAGGAA 59.500 45.455 0.00 0.00 36.57 3.36
2234 7742 3.055458 TCCGCATACACATCTTGAGGAAA 60.055 43.478 0.00 0.00 36.57 3.13
2235 7743 3.689161 CCGCATACACATCTTGAGGAAAA 59.311 43.478 0.00 0.00 32.72 2.29
2236 7744 4.155826 CCGCATACACATCTTGAGGAAAAA 59.844 41.667 0.00 0.00 32.72 1.94
2237 7745 5.163622 CCGCATACACATCTTGAGGAAAAAT 60.164 40.000 0.00 0.00 32.72 1.82
2238 7746 5.967674 CGCATACACATCTTGAGGAAAAATC 59.032 40.000 0.00 0.00 0.00 2.17
2239 7747 6.403527 CGCATACACATCTTGAGGAAAAATCA 60.404 38.462 0.00 0.00 0.00 2.57
2240 7748 7.315142 GCATACACATCTTGAGGAAAAATCAA 58.685 34.615 0.00 0.00 35.45 2.57
2241 7749 7.977853 GCATACACATCTTGAGGAAAAATCAAT 59.022 33.333 0.00 0.00 36.16 2.57
2242 7750 9.297586 CATACACATCTTGAGGAAAAATCAATG 57.702 33.333 0.00 0.00 36.16 2.82
2243 7751 7.294017 ACACATCTTGAGGAAAAATCAATGT 57.706 32.000 0.00 0.00 36.16 2.71
2244 7752 8.408043 ACACATCTTGAGGAAAAATCAATGTA 57.592 30.769 0.00 0.00 36.16 2.29
2245 7753 8.859090 ACACATCTTGAGGAAAAATCAATGTAA 58.141 29.630 0.00 0.00 36.16 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.532090 CCGACTTCAATCGAGAGACCG 60.532 57.143 0.00 0.00 46.97 4.79
1 2 1.473278 ACCGACTTCAATCGAGAGACC 59.527 52.381 0.00 0.00 46.97 3.85
2 3 2.161808 TCACCGACTTCAATCGAGAGAC 59.838 50.000 0.00 0.00 46.97 3.36
3 4 2.433436 TCACCGACTTCAATCGAGAGA 58.567 47.619 0.00 0.00 45.13 3.10
4 5 2.921634 TCACCGACTTCAATCGAGAG 57.078 50.000 0.00 0.00 45.13 3.20
5 6 2.159240 CCATCACCGACTTCAATCGAGA 60.159 50.000 0.00 0.00 45.13 4.04
6 7 2.196749 CCATCACCGACTTCAATCGAG 58.803 52.381 0.00 0.00 45.13 4.04
7 8 1.548719 ACCATCACCGACTTCAATCGA 59.451 47.619 0.00 0.00 45.13 3.59
8 9 2.010145 ACCATCACCGACTTCAATCG 57.990 50.000 0.00 0.00 41.89 3.34
9 10 2.159517 GCAACCATCACCGACTTCAATC 60.160 50.000 0.00 0.00 0.00 2.67
10 11 1.812571 GCAACCATCACCGACTTCAAT 59.187 47.619 0.00 0.00 0.00 2.57
11 12 1.202758 AGCAACCATCACCGACTTCAA 60.203 47.619 0.00 0.00 0.00 2.69
12 13 0.396435 AGCAACCATCACCGACTTCA 59.604 50.000 0.00 0.00 0.00 3.02
13 14 1.523758 AAGCAACCATCACCGACTTC 58.476 50.000 0.00 0.00 0.00 3.01
14 15 1.981256 AAAGCAACCATCACCGACTT 58.019 45.000 0.00 0.00 0.00 3.01
15 16 2.851263 TAAAGCAACCATCACCGACT 57.149 45.000 0.00 0.00 0.00 4.18
16 17 5.751243 ATTATAAAGCAACCATCACCGAC 57.249 39.130 0.00 0.00 0.00 4.79
17 18 9.562408 TTTATATTATAAAGCAACCATCACCGA 57.438 29.630 5.01 0.00 0.00 4.69
37 38 9.942850 CAAAAAGGGTTTCCACTCATTTTATAT 57.057 29.630 0.00 0.00 34.83 0.86
38 39 8.371699 CCAAAAAGGGTTTCCACTCATTTTATA 58.628 33.333 0.00 0.00 34.83 0.98
39 40 7.147391 ACCAAAAAGGGTTTCCACTCATTTTAT 60.147 33.333 0.00 0.00 43.89 1.40
40 41 6.157123 ACCAAAAAGGGTTTCCACTCATTTTA 59.843 34.615 0.00 0.00 43.89 1.52
41 42 5.045213 ACCAAAAAGGGTTTCCACTCATTTT 60.045 36.000 0.00 0.00 43.89 1.82
42 43 4.473196 ACCAAAAAGGGTTTCCACTCATTT 59.527 37.500 0.00 0.00 43.89 2.32
43 44 4.037222 ACCAAAAAGGGTTTCCACTCATT 58.963 39.130 0.00 0.00 43.89 2.57
44 45 3.653164 ACCAAAAAGGGTTTCCACTCAT 58.347 40.909 0.00 0.00 43.89 2.90
45 46 3.108847 ACCAAAAAGGGTTTCCACTCA 57.891 42.857 0.00 0.00 43.89 3.41
46 47 6.904463 TTATACCAAAAAGGGTTTCCACTC 57.096 37.500 0.00 0.00 43.89 3.51
47 48 6.212589 CCATTATACCAAAAAGGGTTTCCACT 59.787 38.462 0.00 0.00 43.89 4.00
48 49 6.211785 TCCATTATACCAAAAAGGGTTTCCAC 59.788 38.462 0.00 0.00 43.89 4.02
49 50 6.323737 TCCATTATACCAAAAAGGGTTTCCA 58.676 36.000 0.00 0.00 43.89 3.53
50 51 6.860790 TCCATTATACCAAAAAGGGTTTCC 57.139 37.500 0.00 0.00 43.89 3.13
51 52 7.817478 CACTTCCATTATACCAAAAAGGGTTTC 59.183 37.037 0.00 0.00 43.89 2.78
52 53 7.676004 CACTTCCATTATACCAAAAAGGGTTT 58.324 34.615 0.00 0.00 43.89 3.27
53 54 6.295632 GCACTTCCATTATACCAAAAAGGGTT 60.296 38.462 0.00 0.00 43.89 4.11
54 55 5.186992 GCACTTCCATTATACCAAAAAGGGT 59.813 40.000 0.00 0.00 43.89 4.34
55 56 5.660460 GCACTTCCATTATACCAAAAAGGG 58.340 41.667 0.00 0.00 43.89 3.95
56 57 5.105917 ACGCACTTCCATTATACCAAAAAGG 60.106 40.000 0.00 0.00 45.67 3.11
57 58 5.949735 ACGCACTTCCATTATACCAAAAAG 58.050 37.500 0.00 0.00 0.00 2.27
58 59 5.968528 ACGCACTTCCATTATACCAAAAA 57.031 34.783 0.00 0.00 0.00 1.94
59 60 5.473846 TCAACGCACTTCCATTATACCAAAA 59.526 36.000 0.00 0.00 0.00 2.44
60 61 5.004448 TCAACGCACTTCCATTATACCAAA 58.996 37.500 0.00 0.00 0.00 3.28
61 62 4.393680 GTCAACGCACTTCCATTATACCAA 59.606 41.667 0.00 0.00 0.00 3.67
62 63 3.936453 GTCAACGCACTTCCATTATACCA 59.064 43.478 0.00 0.00 0.00 3.25
63 64 3.311596 GGTCAACGCACTTCCATTATACC 59.688 47.826 0.00 0.00 0.00 2.73
64 65 3.936453 TGGTCAACGCACTTCCATTATAC 59.064 43.478 0.00 0.00 0.00 1.47
65 66 3.936453 GTGGTCAACGCACTTCCATTATA 59.064 43.478 0.00 0.00 0.00 0.98
76 77 0.753867 TAGTTCCAGTGGTCAACGCA 59.246 50.000 9.54 0.00 0.00 5.24
78 79 1.616865 TCCTAGTTCCAGTGGTCAACG 59.383 52.381 9.54 0.00 0.00 4.10
79 80 2.613223 GCTCCTAGTTCCAGTGGTCAAC 60.613 54.545 9.54 7.36 0.00 3.18
80 81 1.623811 GCTCCTAGTTCCAGTGGTCAA 59.376 52.381 9.54 0.00 0.00 3.18
90 92 6.500684 TTGATCACAAATTGCTCCTAGTTC 57.499 37.500 0.00 0.00 32.73 3.01
93 95 8.133627 CCTATTTTGATCACAAATTGCTCCTAG 58.866 37.037 16.00 5.07 43.99 3.02
217 220 0.601841 TGCCTCGAAGAACCGGTTTC 60.602 55.000 23.22 15.10 34.09 2.78
231 235 2.540973 GGTTTGTTTTCAGTCGTGCCTC 60.541 50.000 0.00 0.00 0.00 4.70
317 321 9.634021 TTATCAGGTATTTGGTATTTGCACATA 57.366 29.630 0.00 0.00 0.00 2.29
349 727 7.698163 ATTAGGAGAACAAGATATCCCAAGT 57.302 36.000 0.00 0.00 31.86 3.16
364 743 4.323417 TGCGAAAGAAGCAATTAGGAGAA 58.677 39.130 0.00 0.00 42.18 2.87
416 795 0.037697 ACGAAGGTGCGCTATGAACA 60.038 50.000 9.73 0.00 33.86 3.18
422 801 1.954382 AGATATCACGAAGGTGCGCTA 59.046 47.619 9.73 0.00 44.03 4.26
499 3798 4.332819 CCGATTATTTTCCTTCAGCGAGTT 59.667 41.667 0.00 0.00 0.00 3.01
609 3908 2.613133 GACTACACTAGAGGCTGTACGG 59.387 54.545 0.00 0.00 0.00 4.02
693 3992 0.605319 GTGGTCGCCTCCATTGTCAA 60.605 55.000 0.00 0.00 39.81 3.18
772 5512 0.251787 ATGGGCCTGGTTTGGACTTC 60.252 55.000 4.53 0.00 34.90 3.01
797 5537 0.034670 ACCTGAGGCCTCATGCTTTC 60.035 55.000 35.11 6.67 39.13 2.62
829 5569 0.737715 GCTCTGCGAGGACAACGAAT 60.738 55.000 7.50 0.00 0.00 3.34
834 5574 0.319900 GAACAGCTCTGCGAGGACAA 60.320 55.000 7.50 0.00 0.00 3.18
835 5575 1.290324 GAACAGCTCTGCGAGGACA 59.710 57.895 7.50 0.00 0.00 4.02
846 5586 2.370718 CTGTGGGAGAGGAACAGCT 58.629 57.895 0.00 0.00 35.34 4.24
851 5591 1.492133 CCTTGGCTGTGGGAGAGGAA 61.492 60.000 0.00 0.00 0.00 3.36
852 5592 1.920325 CCTTGGCTGTGGGAGAGGA 60.920 63.158 0.00 0.00 0.00 3.71
857 5597 2.836154 GTCACCTTGGCTGTGGGA 59.164 61.111 0.00 0.00 34.46 4.37
874 5614 1.739067 AAGAAAGAAGAATCCCGGCG 58.261 50.000 0.00 0.00 0.00 6.46
1042 5782 2.203280 CGTTTGCACCCAGGTGGA 60.203 61.111 18.24 13.07 45.49 4.02
1048 5788 1.115467 AATTCCAACGTTTGCACCCA 58.885 45.000 0.00 0.00 0.00 4.51
1056 5796 5.704053 CCAGACCTTAAGTAATTCCAACGTT 59.296 40.000 0.00 0.00 0.00 3.99
1057 5797 5.221783 ACCAGACCTTAAGTAATTCCAACGT 60.222 40.000 0.97 0.00 0.00 3.99
1092 5832 0.322975 AGCTCTTGCACTTGGTCGAT 59.677 50.000 0.00 0.00 42.74 3.59
1163 5904 2.157701 CAGCTCTCGCAGAAGTCGC 61.158 63.158 0.00 0.00 39.10 5.19
1326 6067 4.097892 CACCAAACTTACATAGGGATTGGC 59.902 45.833 0.00 0.00 38.63 4.52
1327 6068 5.261216 ACACCAAACTTACATAGGGATTGG 58.739 41.667 0.00 0.00 39.83 3.16
1398 6899 9.484806 AAATCATCTCCAAAAATCCATAGTTCT 57.515 29.630 0.00 0.00 0.00 3.01
1441 6942 8.862085 GCTCTTATATAAGTTTACAGAGGGAGT 58.138 37.037 19.58 0.00 34.93 3.85
1442 6943 8.861086 TGCTCTTATATAAGTTTACAGAGGGAG 58.139 37.037 19.58 8.43 34.93 4.30
1443 6944 8.639761 GTGCTCTTATATAAGTTTACAGAGGGA 58.360 37.037 19.58 0.00 34.93 4.20
1444 6945 8.643324 AGTGCTCTTATATAAGTTTACAGAGGG 58.357 37.037 19.58 0.00 34.93 4.30
1461 6962 9.409918 ACTAATGTAGTGATCTAAGTGCTCTTA 57.590 33.333 7.92 7.92 37.69 2.10
1462 6963 8.299990 ACTAATGTAGTGATCTAAGTGCTCTT 57.700 34.615 6.25 6.25 37.69 2.85
1463 6964 7.889873 ACTAATGTAGTGATCTAAGTGCTCT 57.110 36.000 0.00 0.00 37.69 4.09
1464 6965 8.934507 AAACTAATGTAGTGATCTAAGTGCTC 57.065 34.615 0.00 0.00 39.39 4.26
1465 6966 9.804758 GTAAACTAATGTAGTGATCTAAGTGCT 57.195 33.333 0.00 0.00 39.39 4.40
1466 6967 9.582431 TGTAAACTAATGTAGTGATCTAAGTGC 57.418 33.333 0.00 0.00 39.39 4.40
1471 6972 9.132923 CCCTCTGTAAACTAATGTAGTGATCTA 57.867 37.037 0.00 0.00 39.39 1.98
1472 6973 7.839705 TCCCTCTGTAAACTAATGTAGTGATCT 59.160 37.037 0.00 0.00 39.39 2.75
1473 6974 8.008513 TCCCTCTGTAAACTAATGTAGTGATC 57.991 38.462 0.00 0.00 39.39 2.92
1474 6975 7.620094 ACTCCCTCTGTAAACTAATGTAGTGAT 59.380 37.037 0.00 0.00 39.39 3.06
1475 6976 6.952358 ACTCCCTCTGTAAACTAATGTAGTGA 59.048 38.462 0.00 0.00 39.39 3.41
1476 6977 7.171630 ACTCCCTCTGTAAACTAATGTAGTG 57.828 40.000 0.00 0.00 39.39 2.74
1477 6978 8.114743 AGTACTCCCTCTGTAAACTAATGTAGT 58.885 37.037 0.00 0.00 41.73 2.73
1478 6979 8.522542 AGTACTCCCTCTGTAAACTAATGTAG 57.477 38.462 0.00 0.00 0.00 2.74
1480 6981 9.490083 AATAGTACTCCCTCTGTAAACTAATGT 57.510 33.333 0.00 0.00 0.00 2.71
1484 6985 8.975295 GGAAAATAGTACTCCCTCTGTAAACTA 58.025 37.037 0.00 0.00 0.00 2.24
1485 6986 7.456902 TGGAAAATAGTACTCCCTCTGTAAACT 59.543 37.037 0.00 0.00 0.00 2.66
1486 6987 7.618137 TGGAAAATAGTACTCCCTCTGTAAAC 58.382 38.462 0.00 0.00 0.00 2.01
1487 6988 7.456902 ACTGGAAAATAGTACTCCCTCTGTAAA 59.543 37.037 0.00 0.00 0.00 2.01
1488 6989 6.958192 ACTGGAAAATAGTACTCCCTCTGTAA 59.042 38.462 0.00 0.00 0.00 2.41
1489 6990 6.500336 ACTGGAAAATAGTACTCCCTCTGTA 58.500 40.000 0.00 0.00 0.00 2.74
1490 6991 5.342866 ACTGGAAAATAGTACTCCCTCTGT 58.657 41.667 0.00 0.00 0.00 3.41
1491 6992 5.941555 ACTGGAAAATAGTACTCCCTCTG 57.058 43.478 0.00 0.00 0.00 3.35
1492 6993 6.023603 TCAACTGGAAAATAGTACTCCCTCT 58.976 40.000 0.00 0.00 0.00 3.69
1493 6994 6.107343 GTCAACTGGAAAATAGTACTCCCTC 58.893 44.000 0.00 0.00 0.00 4.30
1494 6995 5.546499 TGTCAACTGGAAAATAGTACTCCCT 59.454 40.000 0.00 0.00 0.00 4.20
1495 6996 5.801380 TGTCAACTGGAAAATAGTACTCCC 58.199 41.667 0.00 0.00 0.00 4.30
1496 6997 7.444487 ACTTTGTCAACTGGAAAATAGTACTCC 59.556 37.037 0.00 0.00 0.00 3.85
1497 6998 8.379457 ACTTTGTCAACTGGAAAATAGTACTC 57.621 34.615 0.00 0.00 0.00 2.59
1498 6999 8.211629 AGACTTTGTCAACTGGAAAATAGTACT 58.788 33.333 0.00 0.00 34.60 2.73
1499 7000 8.379457 AGACTTTGTCAACTGGAAAATAGTAC 57.621 34.615 0.46 0.00 34.60 2.73
1500 7001 9.485206 GTAGACTTTGTCAACTGGAAAATAGTA 57.515 33.333 0.46 0.00 34.60 1.82
1509 7010 5.639506 CCTGTATGTAGACTTTGTCAACTGG 59.360 44.000 0.46 0.00 34.60 4.00
1510 7011 6.455647 TCCTGTATGTAGACTTTGTCAACTG 58.544 40.000 0.46 0.00 34.60 3.16
1520 7021 7.907389 TGTGAGATTTTTCCTGTATGTAGACT 58.093 34.615 0.00 0.00 0.00 3.24
1521 7022 8.547967 TTGTGAGATTTTTCCTGTATGTAGAC 57.452 34.615 0.00 0.00 0.00 2.59
1522 7023 9.567776 TTTTGTGAGATTTTTCCTGTATGTAGA 57.432 29.630 0.00 0.00 0.00 2.59
1555 7059 8.395605 TCCTTACTTCCATAGTGGGTTTTAATT 58.604 33.333 0.00 0.00 38.32 1.40
1578 7082 7.110155 ACGTGAGGTTAAATACATGAATTCCT 58.890 34.615 0.00 0.00 0.00 3.36
1610 7114 5.575957 GCACAAATCAGTGAACATCCATAG 58.424 41.667 0.00 0.00 42.05 2.23
1611 7115 4.094739 CGCACAAATCAGTGAACATCCATA 59.905 41.667 0.00 0.00 42.05 2.74
1614 7118 2.483877 TCGCACAAATCAGTGAACATCC 59.516 45.455 0.00 0.00 42.05 3.51
1643 7151 8.114905 GCGTGACTTTCCTAATTAAATCACTAC 58.885 37.037 0.00 0.00 34.43 2.73
1723 7231 9.899661 AGTACACCTATCTATTAAAATGTTGCA 57.100 29.630 0.00 0.00 0.00 4.08
1750 7258 7.280428 TGTCAACCTATCAAACTTTGTTCGTTA 59.720 33.333 1.44 0.00 0.00 3.18
1753 7261 5.907391 GTGTCAACCTATCAAACTTTGTTCG 59.093 40.000 1.44 0.00 0.00 3.95
1757 7265 6.151691 CCATGTGTCAACCTATCAAACTTTG 58.848 40.000 0.00 0.00 0.00 2.77
1766 7274 3.894427 TGTTTTGCCATGTGTCAACCTAT 59.106 39.130 0.00 0.00 0.00 2.57
1767 7275 3.067461 GTGTTTTGCCATGTGTCAACCTA 59.933 43.478 0.00 0.00 0.00 3.08
1774 7282 3.055963 CCCATATGTGTTTTGCCATGTGT 60.056 43.478 1.24 0.00 30.77 3.72
1775 7283 3.523547 CCCATATGTGTTTTGCCATGTG 58.476 45.455 1.24 0.00 32.05 3.21
1776 7284 2.500910 CCCCATATGTGTTTTGCCATGT 59.499 45.455 1.24 0.00 0.00 3.21
1777 7285 2.158928 CCCCCATATGTGTTTTGCCATG 60.159 50.000 1.24 0.00 0.00 3.66
1778 7286 2.117865 CCCCCATATGTGTTTTGCCAT 58.882 47.619 1.24 0.00 0.00 4.40
1779 7287 1.566211 CCCCCATATGTGTTTTGCCA 58.434 50.000 1.24 0.00 0.00 4.92
1780 7288 0.177836 GCCCCCATATGTGTTTTGCC 59.822 55.000 1.24 0.00 0.00 4.52
1781 7289 0.901124 TGCCCCCATATGTGTTTTGC 59.099 50.000 1.24 0.00 0.00 3.68
1782 7290 3.910568 ATTGCCCCCATATGTGTTTTG 57.089 42.857 1.24 0.00 0.00 2.44
1783 7291 6.355747 CAATTATTGCCCCCATATGTGTTTT 58.644 36.000 1.24 0.00 0.00 2.43
1784 7292 5.163216 CCAATTATTGCCCCCATATGTGTTT 60.163 40.000 1.24 0.00 0.00 2.83
1785 7293 4.347583 CCAATTATTGCCCCCATATGTGTT 59.652 41.667 1.24 0.00 0.00 3.32
1786 7294 3.903090 CCAATTATTGCCCCCATATGTGT 59.097 43.478 1.24 0.00 0.00 3.72
1787 7295 3.261390 CCCAATTATTGCCCCCATATGTG 59.739 47.826 1.24 0.00 0.00 3.21
1788 7296 3.519667 CCCAATTATTGCCCCCATATGT 58.480 45.455 1.24 0.00 0.00 2.29
1789 7297 2.236893 GCCCAATTATTGCCCCCATATG 59.763 50.000 0.00 0.00 0.00 1.78
1790 7298 2.114141 AGCCCAATTATTGCCCCCATAT 59.886 45.455 0.00 0.00 0.00 1.78
1791 7299 1.507300 AGCCCAATTATTGCCCCCATA 59.493 47.619 0.00 0.00 0.00 2.74
1792 7300 0.268566 AGCCCAATTATTGCCCCCAT 59.731 50.000 0.00 0.00 0.00 4.00
1793 7301 0.937441 TAGCCCAATTATTGCCCCCA 59.063 50.000 0.00 0.00 0.00 4.96
1821 7329 2.012673 GGAAGCCACACTCAAGCATAG 58.987 52.381 0.00 0.00 0.00 2.23
1829 7337 1.026718 CCCAATCGGAAGCCACACTC 61.027 60.000 0.00 0.00 0.00 3.51
1835 7343 1.474330 ATGAAACCCAATCGGAAGCC 58.526 50.000 0.00 0.00 34.64 4.35
1846 7354 3.758554 ACACTCATGCACTTATGAAACCC 59.241 43.478 0.00 0.00 36.69 4.11
1849 7357 3.191162 GCCACACTCATGCACTTATGAAA 59.809 43.478 0.00 0.00 36.69 2.69
1852 7360 2.362736 AGCCACACTCATGCACTTATG 58.637 47.619 0.00 0.00 0.00 1.90
1877 7385 8.454894 CCATTTCGGAAAAAGAAAAAGGAAAAA 58.545 29.630 7.33 0.00 40.44 1.94
1878 7386 7.066404 CCCATTTCGGAAAAAGAAAAAGGAAAA 59.934 33.333 7.33 0.00 40.44 2.29
1879 7387 6.540551 CCCATTTCGGAAAAAGAAAAAGGAAA 59.459 34.615 7.33 0.00 40.44 3.13
1880 7388 6.052360 CCCATTTCGGAAAAAGAAAAAGGAA 58.948 36.000 7.33 0.00 40.44 3.36
1881 7389 5.454045 CCCCATTTCGGAAAAAGAAAAAGGA 60.454 40.000 7.33 0.00 40.44 3.36
1882 7390 4.754618 CCCCATTTCGGAAAAAGAAAAAGG 59.245 41.667 7.33 0.68 40.44 3.11
1883 7391 4.754618 CCCCCATTTCGGAAAAAGAAAAAG 59.245 41.667 7.33 0.00 40.44 2.27
1884 7392 4.409247 TCCCCCATTTCGGAAAAAGAAAAA 59.591 37.500 7.33 0.00 40.44 1.94
1885 7393 3.967987 TCCCCCATTTCGGAAAAAGAAAA 59.032 39.130 7.33 0.00 40.44 2.29
1886 7394 3.577919 TCCCCCATTTCGGAAAAAGAAA 58.422 40.909 7.33 0.00 41.17 2.52
1887 7395 3.246416 TCCCCCATTTCGGAAAAAGAA 57.754 42.857 7.33 0.00 36.56 2.52
1888 7396 2.982339 TCCCCCATTTCGGAAAAAGA 57.018 45.000 7.33 0.00 36.56 2.52
1889 7397 3.161866 TCTTCCCCCATTTCGGAAAAAG 58.838 45.455 7.33 5.74 37.69 2.27
1890 7398 3.246416 TCTTCCCCCATTTCGGAAAAA 57.754 42.857 7.33 0.00 37.69 1.94
1891 7399 2.982339 TCTTCCCCCATTTCGGAAAA 57.018 45.000 7.33 0.00 37.69 2.29
1892 7400 2.682563 CGATCTTCCCCCATTTCGGAAA 60.683 50.000 5.52 5.52 37.69 3.13
1893 7401 1.134220 CGATCTTCCCCCATTTCGGAA 60.134 52.381 0.00 0.00 36.56 4.30
1894 7402 0.468226 CGATCTTCCCCCATTTCGGA 59.532 55.000 0.00 0.00 36.56 4.55
1895 7403 1.166531 GCGATCTTCCCCCATTTCGG 61.167 60.000 0.00 0.00 0.00 4.30
1896 7404 1.166531 GGCGATCTTCCCCCATTTCG 61.167 60.000 0.00 0.00 0.00 3.46
1897 7405 0.823769 GGGCGATCTTCCCCCATTTC 60.824 60.000 8.34 0.00 38.70 2.17
1898 7406 1.230212 GGGCGATCTTCCCCCATTT 59.770 57.895 8.34 0.00 38.70 2.32
1899 7407 2.927056 GGGCGATCTTCCCCCATT 59.073 61.111 8.34 0.00 38.70 3.16
1906 7414 4.610714 GAGGGCGGGGCGATCTTC 62.611 72.222 0.00 0.00 0.00 2.87
1915 7423 4.113815 TTGGATGCTGAGGGCGGG 62.114 66.667 0.00 0.00 45.43 6.13
1916 7424 2.515523 CTTGGATGCTGAGGGCGG 60.516 66.667 0.00 0.00 45.43 6.13
1917 7425 1.523258 CTCTTGGATGCTGAGGGCG 60.523 63.158 1.19 0.00 45.43 6.13
1918 7426 0.473326 ATCTCTTGGATGCTGAGGGC 59.527 55.000 7.63 0.00 42.22 5.19
1919 7427 2.257691 CATCTCTTGGATGCTGAGGG 57.742 55.000 7.63 0.00 44.21 4.30
1927 7435 3.771216 AGGTTTTGTGCATCTCTTGGAT 58.229 40.909 0.00 0.00 34.51 3.41
1928 7436 3.228188 AGGTTTTGTGCATCTCTTGGA 57.772 42.857 0.00 0.00 0.00 3.53
1929 7437 4.326504 AAAGGTTTTGTGCATCTCTTGG 57.673 40.909 0.00 0.00 0.00 3.61
1930 7438 7.951530 ATAAAAAGGTTTTGTGCATCTCTTG 57.048 32.000 0.00 0.00 0.00 3.02
1931 7439 9.696917 CTAATAAAAAGGTTTTGTGCATCTCTT 57.303 29.630 0.00 0.00 0.00 2.85
1932 7440 9.077885 TCTAATAAAAAGGTTTTGTGCATCTCT 57.922 29.630 0.00 0.00 0.00 3.10
1933 7441 9.860898 ATCTAATAAAAAGGTTTTGTGCATCTC 57.139 29.630 0.00 0.00 0.00 2.75
1946 7454 9.736023 GGTGCTGTGAATAATCTAATAAAAAGG 57.264 33.333 0.00 0.00 0.00 3.11
1952 7460 9.764363 CTGTAAGGTGCTGTGAATAATCTAATA 57.236 33.333 0.00 0.00 0.00 0.98
1953 7461 8.668510 CTGTAAGGTGCTGTGAATAATCTAAT 57.331 34.615 0.00 0.00 0.00 1.73
1972 7480 7.497249 CCTGATCTTTGTAATTCCTCCTGTAAG 59.503 40.741 0.00 0.00 0.00 2.34
1973 7481 7.338710 CCTGATCTTTGTAATTCCTCCTGTAA 58.661 38.462 0.00 0.00 0.00 2.41
1974 7482 6.632672 GCCTGATCTTTGTAATTCCTCCTGTA 60.633 42.308 0.00 0.00 0.00 2.74
1975 7483 5.749462 CCTGATCTTTGTAATTCCTCCTGT 58.251 41.667 0.00 0.00 0.00 4.00
1976 7484 4.578105 GCCTGATCTTTGTAATTCCTCCTG 59.422 45.833 0.00 0.00 0.00 3.86
1977 7485 4.385754 GGCCTGATCTTTGTAATTCCTCCT 60.386 45.833 0.00 0.00 0.00 3.69
1978 7486 3.885901 GGCCTGATCTTTGTAATTCCTCC 59.114 47.826 0.00 0.00 0.00 4.30
1979 7487 3.561725 CGGCCTGATCTTTGTAATTCCTC 59.438 47.826 0.00 0.00 0.00 3.71
1980 7488 3.199946 TCGGCCTGATCTTTGTAATTCCT 59.800 43.478 0.00 0.00 0.00 3.36
1981 7489 3.541632 TCGGCCTGATCTTTGTAATTCC 58.458 45.455 0.00 0.00 0.00 3.01
1982 7490 4.496507 GCTTCGGCCTGATCTTTGTAATTC 60.497 45.833 0.00 0.00 34.32 2.17
1983 7491 3.378427 GCTTCGGCCTGATCTTTGTAATT 59.622 43.478 0.00 0.00 34.32 1.40
1984 7492 2.945668 GCTTCGGCCTGATCTTTGTAAT 59.054 45.455 0.00 0.00 34.32 1.89
1985 7493 2.356135 GCTTCGGCCTGATCTTTGTAA 58.644 47.619 0.00 0.00 34.32 2.41
1986 7494 2.024176 GCTTCGGCCTGATCTTTGTA 57.976 50.000 0.00 0.00 34.32 2.41
1987 7495 2.859992 GCTTCGGCCTGATCTTTGT 58.140 52.632 0.00 0.00 34.32 2.83
1998 7506 0.442699 CTAGTTTTCGTGGCTTCGGC 59.557 55.000 3.35 0.00 40.88 5.54
1999 7507 0.442699 GCTAGTTTTCGTGGCTTCGG 59.557 55.000 0.00 0.00 0.00 4.30
2000 7508 0.093026 CGCTAGTTTTCGTGGCTTCG 59.907 55.000 0.00 0.00 0.00 3.79
2001 7509 1.126296 GTCGCTAGTTTTCGTGGCTTC 59.874 52.381 0.00 0.00 0.00 3.86
2002 7510 1.145803 GTCGCTAGTTTTCGTGGCTT 58.854 50.000 0.00 0.00 0.00 4.35
2003 7511 0.032952 TGTCGCTAGTTTTCGTGGCT 59.967 50.000 0.00 0.00 0.00 4.75
2004 7512 0.438830 CTGTCGCTAGTTTTCGTGGC 59.561 55.000 0.00 0.00 0.00 5.01
2005 7513 0.438830 GCTGTCGCTAGTTTTCGTGG 59.561 55.000 0.00 0.00 0.00 4.94
2006 7514 1.419374 AGCTGTCGCTAGTTTTCGTG 58.581 50.000 0.00 0.00 46.79 4.35
2007 7515 3.888093 AGCTGTCGCTAGTTTTCGT 57.112 47.368 0.00 0.00 46.79 3.85
2019 7527 2.351350 GCTCTAGGATTAGCGAGCTGTC 60.351 54.545 7.99 5.89 44.04 3.51
2020 7528 1.611491 GCTCTAGGATTAGCGAGCTGT 59.389 52.381 7.99 0.00 44.04 4.40
2021 7529 1.611006 TGCTCTAGGATTAGCGAGCTG 59.389 52.381 7.99 0.00 46.70 4.24
2022 7530 1.611491 GTGCTCTAGGATTAGCGAGCT 59.389 52.381 10.89 2.25 46.70 4.09
2023 7531 1.611491 AGTGCTCTAGGATTAGCGAGC 59.389 52.381 0.00 0.00 46.74 5.03
2024 7532 5.182190 TCATAAGTGCTCTAGGATTAGCGAG 59.818 44.000 0.00 0.00 41.77 5.03
2025 7533 5.070685 TCATAAGTGCTCTAGGATTAGCGA 58.929 41.667 0.00 0.00 41.77 4.93
2026 7534 5.378292 TCATAAGTGCTCTAGGATTAGCG 57.622 43.478 0.00 0.00 41.77 4.26
2027 7535 6.162777 CCTTCATAAGTGCTCTAGGATTAGC 58.837 44.000 0.00 0.00 39.25 3.09
2028 7536 6.162777 GCCTTCATAAGTGCTCTAGGATTAG 58.837 44.000 5.85 0.00 0.00 1.73
2029 7537 5.602561 TGCCTTCATAAGTGCTCTAGGATTA 59.397 40.000 5.85 0.00 0.00 1.75
2030 7538 4.410228 TGCCTTCATAAGTGCTCTAGGATT 59.590 41.667 5.85 0.00 0.00 3.01
2031 7539 3.969976 TGCCTTCATAAGTGCTCTAGGAT 59.030 43.478 5.85 0.00 0.00 3.24
2032 7540 3.133003 GTGCCTTCATAAGTGCTCTAGGA 59.867 47.826 5.85 0.00 0.00 2.94
2033 7541 3.462021 GTGCCTTCATAAGTGCTCTAGG 58.538 50.000 0.00 0.00 0.00 3.02
2034 7542 3.119291 CGTGCCTTCATAAGTGCTCTAG 58.881 50.000 0.00 0.00 0.00 2.43
2035 7543 2.758423 TCGTGCCTTCATAAGTGCTCTA 59.242 45.455 0.00 0.00 0.00 2.43
2036 7544 1.550524 TCGTGCCTTCATAAGTGCTCT 59.449 47.619 0.00 0.00 0.00 4.09
2037 7545 1.929836 CTCGTGCCTTCATAAGTGCTC 59.070 52.381 0.00 0.00 0.00 4.26
2038 7546 1.276421 ACTCGTGCCTTCATAAGTGCT 59.724 47.619 0.00 0.00 0.00 4.40
2039 7547 1.661112 GACTCGTGCCTTCATAAGTGC 59.339 52.381 0.00 0.00 0.00 4.40
2040 7548 1.920574 CGACTCGTGCCTTCATAAGTG 59.079 52.381 0.00 0.00 0.00 3.16
2041 7549 1.544691 ACGACTCGTGCCTTCATAAGT 59.455 47.619 2.53 0.00 39.18 2.24
2042 7550 2.186076 GACGACTCGTGCCTTCATAAG 58.814 52.381 9.27 0.00 41.37 1.73
2043 7551 1.466866 CGACGACTCGTGCCTTCATAA 60.467 52.381 9.27 0.00 41.37 1.90
2044 7552 0.098200 CGACGACTCGTGCCTTCATA 59.902 55.000 9.27 0.00 41.37 2.15
2045 7553 1.154016 CGACGACTCGTGCCTTCAT 60.154 57.895 9.27 0.00 41.37 2.57
2046 7554 1.788067 TTCGACGACTCGTGCCTTCA 61.788 55.000 9.27 0.00 41.37 3.02
2047 7555 0.456312 ATTCGACGACTCGTGCCTTC 60.456 55.000 9.27 0.00 41.37 3.46
2048 7556 0.806868 TATTCGACGACTCGTGCCTT 59.193 50.000 9.27 0.00 41.37 4.35
2049 7557 0.377554 CTATTCGACGACTCGTGCCT 59.622 55.000 9.27 0.00 41.37 4.75
2050 7558 0.591741 CCTATTCGACGACTCGTGCC 60.592 60.000 9.27 0.00 41.37 5.01
2051 7559 0.376152 TCCTATTCGACGACTCGTGC 59.624 55.000 9.27 0.13 41.37 5.34
2052 7560 1.267932 GGTCCTATTCGACGACTCGTG 60.268 57.143 9.27 1.92 41.37 4.35
2053 7561 1.012841 GGTCCTATTCGACGACTCGT 58.987 55.000 3.08 3.08 45.10 4.18
2054 7562 1.012086 TGGTCCTATTCGACGACTCG 58.988 55.000 0.00 0.00 41.65 4.18
2055 7563 2.163010 TGTTGGTCCTATTCGACGACTC 59.837 50.000 0.00 0.00 33.30 3.36
2056 7564 2.094854 GTGTTGGTCCTATTCGACGACT 60.095 50.000 0.00 0.00 33.30 4.18
2057 7565 2.257034 GTGTTGGTCCTATTCGACGAC 58.743 52.381 0.00 0.00 33.30 4.34
2058 7566 1.203052 GGTGTTGGTCCTATTCGACGA 59.797 52.381 0.00 0.00 33.30 4.20
2059 7567 1.636988 GGTGTTGGTCCTATTCGACG 58.363 55.000 0.00 0.00 33.30 5.12
2060 7568 1.553704 AGGGTGTTGGTCCTATTCGAC 59.446 52.381 0.00 0.00 0.00 4.20
2061 7569 1.553248 CAGGGTGTTGGTCCTATTCGA 59.447 52.381 0.00 0.00 0.00 3.71
2062 7570 1.553248 TCAGGGTGTTGGTCCTATTCG 59.447 52.381 0.00 0.00 0.00 3.34
2063 7571 2.304761 TGTCAGGGTGTTGGTCCTATTC 59.695 50.000 0.00 0.00 0.00 1.75
2064 7572 2.344592 TGTCAGGGTGTTGGTCCTATT 58.655 47.619 0.00 0.00 0.00 1.73
2065 7573 2.038863 TGTCAGGGTGTTGGTCCTAT 57.961 50.000 0.00 0.00 0.00 2.57
2066 7574 2.038863 ATGTCAGGGTGTTGGTCCTA 57.961 50.000 0.00 0.00 0.00 2.94
2067 7575 2.038863 TATGTCAGGGTGTTGGTCCT 57.961 50.000 0.00 0.00 0.00 3.85
2068 7576 2.224670 TGTTATGTCAGGGTGTTGGTCC 60.225 50.000 0.00 0.00 0.00 4.46
2069 7577 3.134574 TGTTATGTCAGGGTGTTGGTC 57.865 47.619 0.00 0.00 0.00 4.02
2070 7578 3.219281 GTTGTTATGTCAGGGTGTTGGT 58.781 45.455 0.00 0.00 0.00 3.67
2071 7579 3.218453 TGTTGTTATGTCAGGGTGTTGG 58.782 45.455 0.00 0.00 0.00 3.77
2072 7580 4.606961 GTTGTTGTTATGTCAGGGTGTTG 58.393 43.478 0.00 0.00 0.00 3.33
2073 7581 3.314080 CGTTGTTGTTATGTCAGGGTGTT 59.686 43.478 0.00 0.00 0.00 3.32
2074 7582 2.875933 CGTTGTTGTTATGTCAGGGTGT 59.124 45.455 0.00 0.00 0.00 4.16
2075 7583 2.875933 ACGTTGTTGTTATGTCAGGGTG 59.124 45.455 0.00 0.00 0.00 4.61
2076 7584 2.875933 CACGTTGTTGTTATGTCAGGGT 59.124 45.455 0.00 0.00 0.00 4.34
2077 7585 2.350388 GCACGTTGTTGTTATGTCAGGG 60.350 50.000 0.00 0.00 0.00 4.45
2078 7586 2.350388 GGCACGTTGTTGTTATGTCAGG 60.350 50.000 0.00 0.00 0.00 3.86
2079 7587 2.548057 AGGCACGTTGTTGTTATGTCAG 59.452 45.455 0.00 0.00 0.00 3.51
2080 7588 2.546368 GAGGCACGTTGTTGTTATGTCA 59.454 45.455 0.00 0.00 0.00 3.58
2081 7589 2.546368 TGAGGCACGTTGTTGTTATGTC 59.454 45.455 0.00 0.00 0.00 3.06
2082 7590 2.566913 TGAGGCACGTTGTTGTTATGT 58.433 42.857 0.00 0.00 0.00 2.29
2083 7591 3.436704 AGATGAGGCACGTTGTTGTTATG 59.563 43.478 0.00 0.00 0.00 1.90
2084 7592 3.674997 AGATGAGGCACGTTGTTGTTAT 58.325 40.909 0.00 0.00 0.00 1.89
2085 7593 3.120321 AGATGAGGCACGTTGTTGTTA 57.880 42.857 0.00 0.00 0.00 2.41
2086 7594 1.967319 AGATGAGGCACGTTGTTGTT 58.033 45.000 0.00 0.00 0.00 2.83
2087 7595 2.831685 TAGATGAGGCACGTTGTTGT 57.168 45.000 0.00 0.00 0.00 3.32
2088 7596 4.481930 TTTTAGATGAGGCACGTTGTTG 57.518 40.909 0.00 0.00 0.00 3.33
2089 7597 4.336993 TGTTTTTAGATGAGGCACGTTGTT 59.663 37.500 0.00 0.00 0.00 2.83
2090 7598 3.880490 TGTTTTTAGATGAGGCACGTTGT 59.120 39.130 0.00 0.00 0.00 3.32
2091 7599 4.213270 TCTGTTTTTAGATGAGGCACGTTG 59.787 41.667 0.00 0.00 0.00 4.10
2092 7600 4.385825 TCTGTTTTTAGATGAGGCACGTT 58.614 39.130 0.00 0.00 0.00 3.99
2093 7601 4.002906 TCTGTTTTTAGATGAGGCACGT 57.997 40.909 0.00 0.00 0.00 4.49
2094 7602 5.356882 TTTCTGTTTTTAGATGAGGCACG 57.643 39.130 0.00 0.00 0.00 5.34
2095 7603 5.157067 GCTTTCTGTTTTTAGATGAGGCAC 58.843 41.667 0.00 0.00 0.00 5.01
2096 7604 4.218417 GGCTTTCTGTTTTTAGATGAGGCA 59.782 41.667 0.00 0.00 36.58 4.75
2097 7605 4.460731 AGGCTTTCTGTTTTTAGATGAGGC 59.539 41.667 0.00 0.00 36.70 4.70
2098 7606 5.163814 CGAGGCTTTCTGTTTTTAGATGAGG 60.164 44.000 0.00 0.00 0.00 3.86
2099 7607 5.163814 CCGAGGCTTTCTGTTTTTAGATGAG 60.164 44.000 0.00 0.00 0.00 2.90
2100 7608 4.695455 CCGAGGCTTTCTGTTTTTAGATGA 59.305 41.667 0.00 0.00 0.00 2.92
2101 7609 4.672801 GCCGAGGCTTTCTGTTTTTAGATG 60.673 45.833 6.90 0.00 38.26 2.90
2102 7610 3.440522 GCCGAGGCTTTCTGTTTTTAGAT 59.559 43.478 6.90 0.00 38.26 1.98
2103 7611 2.812011 GCCGAGGCTTTCTGTTTTTAGA 59.188 45.455 6.90 0.00 38.26 2.10
2104 7612 2.095212 GGCCGAGGCTTTCTGTTTTTAG 60.095 50.000 14.33 0.00 41.60 1.85
2105 7613 1.883926 GGCCGAGGCTTTCTGTTTTTA 59.116 47.619 14.33 0.00 41.60 1.52
2106 7614 0.673985 GGCCGAGGCTTTCTGTTTTT 59.326 50.000 14.33 0.00 41.60 1.94
2107 7615 0.467290 TGGCCGAGGCTTTCTGTTTT 60.467 50.000 14.33 0.00 41.60 2.43
2108 7616 0.890996 CTGGCCGAGGCTTTCTGTTT 60.891 55.000 14.33 0.00 41.60 2.83
2109 7617 1.302832 CTGGCCGAGGCTTTCTGTT 60.303 57.895 14.33 0.00 41.60 3.16
2110 7618 2.348998 CTGGCCGAGGCTTTCTGT 59.651 61.111 14.33 0.00 41.60 3.41
2111 7619 3.130160 GCTGGCCGAGGCTTTCTG 61.130 66.667 14.33 3.07 41.60 3.02
2112 7620 3.618780 CTGCTGGCCGAGGCTTTCT 62.619 63.158 14.33 0.00 41.60 2.52
2113 7621 3.130160 CTGCTGGCCGAGGCTTTC 61.130 66.667 14.33 3.89 41.60 2.62
2123 7631 4.099170 CACTTGCTCGCTGCTGGC 62.099 66.667 0.00 2.34 43.37 4.85
2124 7632 3.429141 CCACTTGCTCGCTGCTGG 61.429 66.667 0.00 0.00 43.37 4.85
2125 7633 4.099170 GCCACTTGCTCGCTGCTG 62.099 66.667 0.00 0.00 43.37 4.41
2126 7634 4.631247 TGCCACTTGCTCGCTGCT 62.631 61.111 0.00 0.00 43.37 4.24
2127 7635 4.395583 GTGCCACTTGCTCGCTGC 62.396 66.667 0.00 0.00 42.00 5.25
2128 7636 2.545596 TTGTGCCACTTGCTCGCTG 61.546 57.895 0.00 0.00 42.00 5.18
2129 7637 2.203195 TTGTGCCACTTGCTCGCT 60.203 55.556 0.00 0.00 42.00 4.93
2130 7638 2.050985 GTTGTGCCACTTGCTCGC 60.051 61.111 0.00 0.00 42.00 5.03
2131 7639 2.639286 GGTTGTGCCACTTGCTCG 59.361 61.111 0.00 0.00 42.00 5.03
2132 7640 2.639286 CGGTTGTGCCACTTGCTC 59.361 61.111 0.00 0.00 42.00 4.26
2133 7641 2.906897 CCGGTTGTGCCACTTGCT 60.907 61.111 0.00 0.00 42.00 3.91
2134 7642 3.194272 GACCGGTTGTGCCACTTGC 62.194 63.158 9.42 0.00 41.77 4.01
2135 7643 2.551912 GGACCGGTTGTGCCACTTG 61.552 63.158 9.42 0.00 36.97 3.16
2136 7644 2.203294 GGACCGGTTGTGCCACTT 60.203 61.111 9.42 0.00 36.97 3.16
2137 7645 4.619227 CGGACCGGTTGTGCCACT 62.619 66.667 9.42 0.00 36.97 4.00
2138 7646 4.612412 TCGGACCGGTTGTGCCAC 62.612 66.667 15.25 0.00 36.97 5.01
2139 7647 4.612412 GTCGGACCGGTTGTGCCA 62.612 66.667 15.25 0.00 36.97 4.92
2140 7648 4.612412 TGTCGGACCGGTTGTGCC 62.612 66.667 15.25 3.79 30.18 5.01
2141 7649 3.041940 CTGTCGGACCGGTTGTGC 61.042 66.667 15.25 0.34 0.00 4.57
2142 7650 1.663702 GTCTGTCGGACCGGTTGTG 60.664 63.158 15.25 1.21 38.93 3.33
2143 7651 2.732658 GTCTGTCGGACCGGTTGT 59.267 61.111 15.25 0.00 38.93 3.32
2150 7658 1.513586 CGCTAACGGTCTGTCGGAC 60.514 63.158 2.91 2.91 43.79 4.79
2151 7659 2.872557 CGCTAACGGTCTGTCGGA 59.127 61.111 0.00 0.00 34.97 4.55
2152 7660 2.879462 GCGCTAACGGTCTGTCGG 60.879 66.667 0.00 0.00 40.57 4.79
2153 7661 0.248336 TATGCGCTAACGGTCTGTCG 60.248 55.000 9.73 0.00 40.57 4.35
2154 7662 1.197910 GTATGCGCTAACGGTCTGTC 58.802 55.000 9.73 0.00 40.57 3.51
2155 7663 0.179119 GGTATGCGCTAACGGTCTGT 60.179 55.000 9.73 0.00 40.57 3.41
2156 7664 1.206745 CGGTATGCGCTAACGGTCTG 61.207 60.000 9.73 0.00 36.87 3.51
2157 7665 1.065273 CGGTATGCGCTAACGGTCT 59.935 57.895 9.73 0.00 36.87 3.85
2158 7666 3.609258 CGGTATGCGCTAACGGTC 58.391 61.111 9.73 0.00 36.87 4.79
2177 7685 3.672310 GAAGACTTCTAGAGCGTGTACG 58.328 50.000 8.00 0.00 43.27 3.67
2178 7686 3.672310 CGAAGACTTCTAGAGCGTGTAC 58.328 50.000 13.22 0.00 0.00 2.90
2179 7687 2.095532 GCGAAGACTTCTAGAGCGTGTA 59.904 50.000 13.22 0.00 0.00 2.90
2180 7688 1.135632 GCGAAGACTTCTAGAGCGTGT 60.136 52.381 13.22 0.00 0.00 4.49
2181 7689 1.540407 GCGAAGACTTCTAGAGCGTG 58.460 55.000 13.22 0.00 0.00 5.34
2182 7690 0.452585 GGCGAAGACTTCTAGAGCGT 59.547 55.000 13.22 0.00 0.00 5.07
2183 7691 0.590230 CGGCGAAGACTTCTAGAGCG 60.590 60.000 13.22 0.79 0.00 5.03
2184 7692 0.868177 GCGGCGAAGACTTCTAGAGC 60.868 60.000 12.98 8.65 0.00 4.09
2185 7693 0.248702 GGCGGCGAAGACTTCTAGAG 60.249 60.000 12.98 3.61 0.00 2.43
2186 7694 1.807886 GGCGGCGAAGACTTCTAGA 59.192 57.895 12.98 0.00 0.00 2.43
2187 7695 1.586564 CGGCGGCGAAGACTTCTAG 60.587 63.158 29.19 5.54 0.00 2.43
2188 7696 2.488355 CGGCGGCGAAGACTTCTA 59.512 61.111 29.19 0.00 0.00 2.10
2202 7710 2.899838 TATGCGGAACATGGCGGC 60.900 61.111 0.00 0.00 40.06 6.53
2203 7711 1.817520 TGTATGCGGAACATGGCGG 60.818 57.895 0.00 0.00 40.06 6.13
2204 7712 1.351707 GTGTATGCGGAACATGGCG 59.648 57.895 0.00 0.00 40.06 5.69
2205 7713 1.002468 GATGTGTATGCGGAACATGGC 60.002 52.381 0.00 0.00 40.06 4.40
2206 7714 2.564771 AGATGTGTATGCGGAACATGG 58.435 47.619 0.00 0.00 40.06 3.66
2207 7715 3.622612 TCAAGATGTGTATGCGGAACATG 59.377 43.478 0.00 0.00 40.06 3.21
2208 7716 3.872696 TCAAGATGTGTATGCGGAACAT 58.127 40.909 0.00 0.00 43.18 2.71
2209 7717 3.261580 CTCAAGATGTGTATGCGGAACA 58.738 45.455 0.00 0.00 0.00 3.18
2210 7718 2.609459 CCTCAAGATGTGTATGCGGAAC 59.391 50.000 0.00 0.00 0.00 3.62
2211 7719 2.499693 TCCTCAAGATGTGTATGCGGAA 59.500 45.455 0.00 0.00 0.00 4.30
2212 7720 2.107366 TCCTCAAGATGTGTATGCGGA 58.893 47.619 0.00 0.00 0.00 5.54
2213 7721 2.602257 TCCTCAAGATGTGTATGCGG 57.398 50.000 0.00 0.00 0.00 5.69
2214 7722 4.944962 TTTTCCTCAAGATGTGTATGCG 57.055 40.909 0.00 0.00 0.00 4.73
2215 7723 6.855836 TGATTTTTCCTCAAGATGTGTATGC 58.144 36.000 0.00 0.00 0.00 3.14
2216 7724 9.297586 CATTGATTTTTCCTCAAGATGTGTATG 57.702 33.333 0.00 0.00 36.16 2.39
2217 7725 9.028284 ACATTGATTTTTCCTCAAGATGTGTAT 57.972 29.630 0.00 0.00 36.16 2.29
2218 7726 8.408043 ACATTGATTTTTCCTCAAGATGTGTA 57.592 30.769 0.00 0.00 36.16 2.90
2219 7727 7.294017 ACATTGATTTTTCCTCAAGATGTGT 57.706 32.000 0.00 0.00 36.16 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.