Multiple sequence alignment - TraesCS1D01G013900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G013900 chr1D 100.000 3560 0 0 1 3560 6912154 6915713 0.000000e+00 6575
1 TraesCS1D01G013900 chr1D 84.690 2580 323 43 1009 3560 407672543 407670008 0.000000e+00 2510
2 TraesCS1D01G013900 chr1D 82.879 2640 362 53 967 3560 6714656 6712061 0.000000e+00 2289
3 TraesCS1D01G013900 chr1D 81.697 2617 387 54 986 3560 6721618 6719052 0.000000e+00 2095
4 TraesCS1D01G013900 chr1D 80.038 2650 410 60 967 3560 6898408 6900994 0.000000e+00 1853
5 TraesCS1D01G013900 chr1D 98.520 608 8 1 1 607 447633923 447633316 0.000000e+00 1072
6 TraesCS1D01G013900 chr1D 96.429 364 10 2 596 958 452748215 452748576 6.580000e-167 597
7 TraesCS1D01G013900 chr1D 95.055 364 15 2 596 958 204291189 204290828 1.430000e-158 569
8 TraesCS1D01G013900 chr1B 96.468 2605 84 5 955 3557 8819974 8817376 0.000000e+00 4294
9 TraesCS1D01G013900 chr1B 83.935 2577 333 43 1009 3560 548193684 548191164 0.000000e+00 2390
10 TraesCS1D01G013900 chr1B 80.632 2659 385 71 966 3560 548199944 548197352 0.000000e+00 1938
11 TraesCS1D01G013900 chr1B 74.479 815 143 36 968 1750 9281225 9282006 3.480000e-75 292
12 TraesCS1D01G013900 chr1A 92.546 2616 182 11 955 3560 8341991 8344603 0.000000e+00 3738
13 TraesCS1D01G013900 chr1A 92.177 2595 196 5 963 3552 8331904 8334496 0.000000e+00 3661
14 TraesCS1D01G013900 chr1A 82.785 2643 361 56 966 3560 8144549 8141953 0.000000e+00 2274
15 TraesCS1D01G013900 chr1A 82.733 2583 382 41 1004 3560 7834679 7837223 0.000000e+00 2241
16 TraesCS1D01G013900 chr1A 80.609 2563 377 63 1004 3517 8327142 8329633 0.000000e+00 1869
17 TraesCS1D01G013900 chr2B 85.802 2613 343 21 966 3560 548623942 548626544 0.000000e+00 2745
18 TraesCS1D01G013900 chr2A 85.546 2629 352 22 955 3560 611302767 611305390 0.000000e+00 2724
19 TraesCS1D01G013900 chr2D 85.507 2615 356 16 966 3560 469990539 469993150 0.000000e+00 2708
20 TraesCS1D01G013900 chr2D 82.846 2635 361 49 966 3559 469983990 469986574 0.000000e+00 2278
21 TraesCS1D01G013900 chr5A 83.792 2579 348 37 1009 3560 12194215 12191680 0.000000e+00 2383
22 TraesCS1D01G013900 chr4B 82.602 2644 355 61 966 3560 36635898 36633311 0.000000e+00 2237
23 TraesCS1D01G013900 chr5D 79.992 2599 441 55 1006 3560 447105737 447108300 0.000000e+00 1845
24 TraesCS1D01G013900 chr5D 98.693 612 6 2 1 610 6929788 6930399 0.000000e+00 1085
25 TraesCS1D01G013900 chr5D 98.522 609 8 1 1 608 561938377 561938985 0.000000e+00 1074
26 TraesCS1D01G013900 chr5D 96.429 364 10 2 596 958 540576840 540577201 6.580000e-167 597
27 TraesCS1D01G013900 chr5D 96.154 364 11 2 596 958 389511867 389511506 3.060000e-165 592
28 TraesCS1D01G013900 chr5B 79.857 2651 408 69 955 3555 549547931 549550505 0.000000e+00 1821
29 TraesCS1D01G013900 chr5B 78.035 2504 444 66 1094 3559 609094757 609097192 0.000000e+00 1480
30 TraesCS1D01G013900 chr5B 76.126 444 88 13 1006 1440 545612209 545611775 2.150000e-52 217
31 TraesCS1D01G013900 chr4D 99.013 608 5 1 1 607 508953567 508952960 0.000000e+00 1088
32 TraesCS1D01G013900 chr4D 98.049 615 11 1 1 614 488840393 488839779 0.000000e+00 1068
33 TraesCS1D01G013900 chr4D 97.893 617 9 4 1 615 497428499 497427885 0.000000e+00 1064
34 TraesCS1D01G013900 chr4D 95.879 364 12 2 596 958 36542564 36542925 1.420000e-163 586
35 TraesCS1D01G013900 chr6D 98.529 612 6 3 1 611 61748561 61749170 0.000000e+00 1077
36 TraesCS1D01G013900 chr6D 96.703 364 9 2 596 958 2078929 2079290 1.410000e-168 603
37 TraesCS1D01G013900 chr6D 96.429 364 10 2 596 958 464774517 464774156 6.580000e-167 597
38 TraesCS1D01G013900 chr7D 98.520 608 8 1 1 607 587556902 587556295 0.000000e+00 1072
39 TraesCS1D01G013900 chr7D 95.330 364 13 3 596 958 557926223 557926583 3.080000e-160 575
40 TraesCS1D01G013900 chr3D 98.520 608 8 1 1 607 380518810 380518203 0.000000e+00 1072
41 TraesCS1D01G013900 chr3D 95.604 364 12 3 596 958 79185082 79184722 6.620000e-162 580


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G013900 chr1D 6912154 6915713 3559 False 6575 6575 100.0000 1 3560 1 chr1D.!!$F2 3559
1 TraesCS1D01G013900 chr1D 407670008 407672543 2535 True 2510 2510 84.6900 1009 3560 1 chr1D.!!$R4 2551
2 TraesCS1D01G013900 chr1D 6712061 6714656 2595 True 2289 2289 82.8790 967 3560 1 chr1D.!!$R1 2593
3 TraesCS1D01G013900 chr1D 6719052 6721618 2566 True 2095 2095 81.6970 986 3560 1 chr1D.!!$R2 2574
4 TraesCS1D01G013900 chr1D 6898408 6900994 2586 False 1853 1853 80.0380 967 3560 1 chr1D.!!$F1 2593
5 TraesCS1D01G013900 chr1D 447633316 447633923 607 True 1072 1072 98.5200 1 607 1 chr1D.!!$R5 606
6 TraesCS1D01G013900 chr1B 8817376 8819974 2598 True 4294 4294 96.4680 955 3557 1 chr1B.!!$R1 2602
7 TraesCS1D01G013900 chr1B 548191164 548199944 8780 True 2164 2390 82.2835 966 3560 2 chr1B.!!$R2 2594
8 TraesCS1D01G013900 chr1B 9281225 9282006 781 False 292 292 74.4790 968 1750 1 chr1B.!!$F1 782
9 TraesCS1D01G013900 chr1A 8341991 8344603 2612 False 3738 3738 92.5460 955 3560 1 chr1A.!!$F2 2605
10 TraesCS1D01G013900 chr1A 8327142 8334496 7354 False 2765 3661 86.3930 963 3552 2 chr1A.!!$F3 2589
11 TraesCS1D01G013900 chr1A 8141953 8144549 2596 True 2274 2274 82.7850 966 3560 1 chr1A.!!$R1 2594
12 TraesCS1D01G013900 chr1A 7834679 7837223 2544 False 2241 2241 82.7330 1004 3560 1 chr1A.!!$F1 2556
13 TraesCS1D01G013900 chr2B 548623942 548626544 2602 False 2745 2745 85.8020 966 3560 1 chr2B.!!$F1 2594
14 TraesCS1D01G013900 chr2A 611302767 611305390 2623 False 2724 2724 85.5460 955 3560 1 chr2A.!!$F1 2605
15 TraesCS1D01G013900 chr2D 469983990 469993150 9160 False 2493 2708 84.1765 966 3560 2 chr2D.!!$F1 2594
16 TraesCS1D01G013900 chr5A 12191680 12194215 2535 True 2383 2383 83.7920 1009 3560 1 chr5A.!!$R1 2551
17 TraesCS1D01G013900 chr4B 36633311 36635898 2587 True 2237 2237 82.6020 966 3560 1 chr4B.!!$R1 2594
18 TraesCS1D01G013900 chr5D 447105737 447108300 2563 False 1845 1845 79.9920 1006 3560 1 chr5D.!!$F2 2554
19 TraesCS1D01G013900 chr5D 6929788 6930399 611 False 1085 1085 98.6930 1 610 1 chr5D.!!$F1 609
20 TraesCS1D01G013900 chr5D 561938377 561938985 608 False 1074 1074 98.5220 1 608 1 chr5D.!!$F4 607
21 TraesCS1D01G013900 chr5B 549547931 549550505 2574 False 1821 1821 79.8570 955 3555 1 chr5B.!!$F1 2600
22 TraesCS1D01G013900 chr5B 609094757 609097192 2435 False 1480 1480 78.0350 1094 3559 1 chr5B.!!$F2 2465
23 TraesCS1D01G013900 chr4D 508952960 508953567 607 True 1088 1088 99.0130 1 607 1 chr4D.!!$R3 606
24 TraesCS1D01G013900 chr4D 488839779 488840393 614 True 1068 1068 98.0490 1 614 1 chr4D.!!$R1 613
25 TraesCS1D01G013900 chr4D 497427885 497428499 614 True 1064 1064 97.8930 1 615 1 chr4D.!!$R2 614
26 TraesCS1D01G013900 chr6D 61748561 61749170 609 False 1077 1077 98.5290 1 611 1 chr6D.!!$F2 610
27 TraesCS1D01G013900 chr7D 587556295 587556902 607 True 1072 1072 98.5200 1 607 1 chr7D.!!$R1 606
28 TraesCS1D01G013900 chr3D 380518203 380518810 607 True 1072 1072 98.5200 1 607 1 chr3D.!!$R2 606

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
846 849 0.107165 GGCCTCACCTCCGCTATTTT 60.107 55.0 0.0 0.0 34.51 1.82 F
922 925 0.184451 CAGTATGCTTGGCCCATCCT 59.816 55.0 0.0 0.0 35.26 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2521 13653 3.243839 GCAGACCACACCACATGAATTTT 60.244 43.478 0.0 0.0 0.0 1.82 R
2685 13817 6.020971 TCACTGCTACAATAGTCTTCGAAA 57.979 37.500 0.0 0.0 0.0 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
608 611 6.495872 TGGAAGCCTCTTTTTCTACTAGTGTA 59.504 38.462 5.39 0.00 0.00 2.90
610 613 5.952033 AGCCTCTTTTTCTACTAGTGTACG 58.048 41.667 5.39 0.00 0.00 3.67
614 617 6.259550 TCTTTTTCTACTAGTGTACGTCCC 57.740 41.667 5.39 0.00 0.00 4.46
615 618 5.183904 TCTTTTTCTACTAGTGTACGTCCCC 59.816 44.000 5.39 0.00 0.00 4.81
616 619 2.717639 TCTACTAGTGTACGTCCCCC 57.282 55.000 5.39 0.00 0.00 5.40
617 620 2.200081 TCTACTAGTGTACGTCCCCCT 58.800 52.381 5.39 0.00 0.00 4.79
618 621 2.171448 TCTACTAGTGTACGTCCCCCTC 59.829 54.545 5.39 0.00 0.00 4.30
619 622 0.998145 ACTAGTGTACGTCCCCCTCT 59.002 55.000 0.00 0.00 0.00 3.69
620 623 2.200081 ACTAGTGTACGTCCCCCTCTA 58.800 52.381 0.00 0.00 0.00 2.43
621 624 2.782341 ACTAGTGTACGTCCCCCTCTAT 59.218 50.000 0.00 0.00 0.00 1.98
622 625 2.842645 AGTGTACGTCCCCCTCTATT 57.157 50.000 0.00 0.00 0.00 1.73
623 626 2.664015 AGTGTACGTCCCCCTCTATTC 58.336 52.381 0.00 0.00 0.00 1.75
624 627 1.336125 GTGTACGTCCCCCTCTATTCG 59.664 57.143 0.00 0.00 0.00 3.34
625 628 0.957362 GTACGTCCCCCTCTATTCGG 59.043 60.000 0.00 0.00 0.00 4.30
626 629 0.825010 TACGTCCCCCTCTATTCGGC 60.825 60.000 0.00 0.00 0.00 5.54
627 630 2.868986 CGTCCCCCTCTATTCGGCC 61.869 68.421 0.00 0.00 0.00 6.13
628 631 1.459730 GTCCCCCTCTATTCGGCCT 60.460 63.158 0.00 0.00 0.00 5.19
629 632 1.054978 GTCCCCCTCTATTCGGCCTT 61.055 60.000 0.00 0.00 0.00 4.35
630 633 0.763223 TCCCCCTCTATTCGGCCTTC 60.763 60.000 0.00 0.00 0.00 3.46
631 634 1.755384 CCCCTCTATTCGGCCTTCC 59.245 63.158 0.00 0.00 0.00 3.46
632 635 0.764752 CCCCTCTATTCGGCCTTCCT 60.765 60.000 0.00 0.00 0.00 3.36
633 636 0.682292 CCCTCTATTCGGCCTTCCTC 59.318 60.000 0.00 0.00 0.00 3.71
634 637 0.682292 CCTCTATTCGGCCTTCCTCC 59.318 60.000 0.00 0.00 0.00 4.30
635 638 1.710816 CTCTATTCGGCCTTCCTCCT 58.289 55.000 0.00 0.00 0.00 3.69
636 639 1.342819 CTCTATTCGGCCTTCCTCCTG 59.657 57.143 0.00 0.00 0.00 3.86
637 640 0.394565 CTATTCGGCCTTCCTCCTGG 59.605 60.000 0.00 0.00 0.00 4.45
638 641 0.326238 TATTCGGCCTTCCTCCTGGT 60.326 55.000 0.00 0.00 34.23 4.00
639 642 1.627297 ATTCGGCCTTCCTCCTGGTC 61.627 60.000 0.00 0.00 34.23 4.02
640 643 3.003173 CGGCCTTCCTCCTGGTCA 61.003 66.667 0.00 0.00 34.23 4.02
641 644 2.592993 CGGCCTTCCTCCTGGTCAA 61.593 63.158 0.00 0.00 34.23 3.18
642 645 1.301293 GGCCTTCCTCCTGGTCAAG 59.699 63.158 0.00 0.00 34.23 3.02
653 656 2.767505 CCTGGTCAAGGGCGAATATAC 58.232 52.381 0.00 0.00 43.15 1.47
654 657 2.404215 CTGGTCAAGGGCGAATATACG 58.596 52.381 0.00 0.00 0.00 3.06
671 674 9.053135 CGAATATACGCTTCTTTCTATGTCTAC 57.947 37.037 0.00 0.00 0.00 2.59
672 675 9.344309 GAATATACGCTTCTTTCTATGTCTACC 57.656 37.037 0.00 0.00 0.00 3.18
673 676 6.710597 ATACGCTTCTTTCTATGTCTACCA 57.289 37.500 0.00 0.00 0.00 3.25
674 677 5.599999 ACGCTTCTTTCTATGTCTACCAT 57.400 39.130 0.00 0.00 37.58 3.55
675 678 5.978814 ACGCTTCTTTCTATGTCTACCATT 58.021 37.500 0.00 0.00 34.86 3.16
676 679 5.812642 ACGCTTCTTTCTATGTCTACCATTG 59.187 40.000 0.00 0.00 34.86 2.82
677 680 6.042777 CGCTTCTTTCTATGTCTACCATTGA 58.957 40.000 0.00 0.00 34.19 2.57
678 681 6.019479 CGCTTCTTTCTATGTCTACCATTGAC 60.019 42.308 0.00 0.00 35.47 3.18
679 682 7.044798 GCTTCTTTCTATGTCTACCATTGACT 58.955 38.462 0.00 0.00 35.47 3.41
680 683 8.198109 GCTTCTTTCTATGTCTACCATTGACTA 58.802 37.037 0.00 0.00 35.47 2.59
681 684 9.743057 CTTCTTTCTATGTCTACCATTGACTAG 57.257 37.037 0.00 0.00 35.47 2.57
682 685 7.717568 TCTTTCTATGTCTACCATTGACTAGC 58.282 38.462 0.00 0.00 35.47 3.42
683 686 7.342026 TCTTTCTATGTCTACCATTGACTAGCA 59.658 37.037 0.00 0.00 35.47 3.49
684 687 7.603180 TTCTATGTCTACCATTGACTAGCAT 57.397 36.000 0.00 0.00 35.47 3.79
685 688 7.220741 TCTATGTCTACCATTGACTAGCATC 57.779 40.000 0.00 0.00 34.86 3.91
686 689 7.007116 TCTATGTCTACCATTGACTAGCATCT 58.993 38.462 0.00 0.00 34.86 2.90
687 690 5.268118 TGTCTACCATTGACTAGCATCTG 57.732 43.478 0.00 0.00 35.63 2.90
688 691 4.956075 TGTCTACCATTGACTAGCATCTGA 59.044 41.667 0.00 0.00 35.63 3.27
689 692 5.422012 TGTCTACCATTGACTAGCATCTGAA 59.578 40.000 0.00 0.00 35.63 3.02
690 693 6.070824 TGTCTACCATTGACTAGCATCTGAAA 60.071 38.462 0.00 0.00 35.63 2.69
691 694 6.478344 GTCTACCATTGACTAGCATCTGAAAG 59.522 42.308 0.00 0.00 0.00 2.62
692 695 5.171339 ACCATTGACTAGCATCTGAAAGT 57.829 39.130 0.00 0.00 33.76 2.66
693 696 6.299805 ACCATTGACTAGCATCTGAAAGTA 57.700 37.500 0.00 0.00 33.76 2.24
694 697 6.893583 ACCATTGACTAGCATCTGAAAGTAT 58.106 36.000 0.00 0.00 33.76 2.12
695 698 7.341805 ACCATTGACTAGCATCTGAAAGTATT 58.658 34.615 0.00 0.00 33.76 1.89
696 699 7.831193 ACCATTGACTAGCATCTGAAAGTATTT 59.169 33.333 0.00 0.00 43.98 1.40
715 718 9.832445 AAGTATTTCGTATTATCATCACCTTGT 57.168 29.630 0.00 0.00 0.00 3.16
721 724 9.740239 TTCGTATTATCATCACCTTGTACTAAC 57.260 33.333 0.00 0.00 0.00 2.34
722 725 8.071967 TCGTATTATCATCACCTTGTACTAACG 58.928 37.037 0.00 0.00 0.00 3.18
723 726 8.071967 CGTATTATCATCACCTTGTACTAACGA 58.928 37.037 0.00 0.00 0.00 3.85
724 727 9.740239 GTATTATCATCACCTTGTACTAACGAA 57.260 33.333 0.00 0.00 0.00 3.85
726 729 8.867112 TTATCATCACCTTGTACTAACGAATC 57.133 34.615 0.00 0.00 0.00 2.52
727 730 5.657474 TCATCACCTTGTACTAACGAATCC 58.343 41.667 0.00 0.00 0.00 3.01
728 731 4.100707 TCACCTTGTACTAACGAATCCG 57.899 45.455 0.00 0.00 42.50 4.18
729 732 2.601763 CACCTTGTACTAACGAATCCGC 59.398 50.000 0.00 0.00 39.95 5.54
730 733 2.199236 CCTTGTACTAACGAATCCGCC 58.801 52.381 0.00 0.00 39.95 6.13
731 734 2.159142 CCTTGTACTAACGAATCCGCCT 60.159 50.000 0.00 0.00 39.95 5.52
732 735 3.518590 CTTGTACTAACGAATCCGCCTT 58.481 45.455 0.00 0.00 39.95 4.35
733 736 2.883574 TGTACTAACGAATCCGCCTTG 58.116 47.619 0.00 0.00 39.95 3.61
734 737 1.591619 GTACTAACGAATCCGCCTTGC 59.408 52.381 0.00 0.00 39.95 4.01
735 738 0.249398 ACTAACGAATCCGCCTTGCT 59.751 50.000 0.00 0.00 39.95 3.91
736 739 1.479323 ACTAACGAATCCGCCTTGCTA 59.521 47.619 0.00 0.00 39.95 3.49
737 740 1.859080 CTAACGAATCCGCCTTGCTAC 59.141 52.381 0.00 0.00 39.95 3.58
738 741 1.082117 AACGAATCCGCCTTGCTACG 61.082 55.000 0.00 0.00 39.95 3.51
739 742 1.518572 CGAATCCGCCTTGCTACGT 60.519 57.895 0.00 0.00 0.00 3.57
740 743 1.480219 CGAATCCGCCTTGCTACGTC 61.480 60.000 0.00 0.00 0.00 4.34
741 744 1.480219 GAATCCGCCTTGCTACGTCG 61.480 60.000 0.00 0.00 0.00 5.12
742 745 2.901051 AATCCGCCTTGCTACGTCGG 62.901 60.000 0.00 0.00 41.30 4.79
743 746 4.430765 CCGCCTTGCTACGTCGGT 62.431 66.667 0.00 0.00 35.75 4.69
744 747 2.486504 CGCCTTGCTACGTCGGTA 59.513 61.111 0.00 0.00 0.00 4.02
745 748 1.870901 CGCCTTGCTACGTCGGTAC 60.871 63.158 0.00 0.00 0.00 3.34
746 749 1.517913 GCCTTGCTACGTCGGTACC 60.518 63.158 0.16 0.16 0.00 3.34
747 750 1.885157 CCTTGCTACGTCGGTACCA 59.115 57.895 13.54 0.00 0.00 3.25
748 751 0.458669 CCTTGCTACGTCGGTACCAT 59.541 55.000 13.54 0.00 0.00 3.55
749 752 1.134907 CCTTGCTACGTCGGTACCATT 60.135 52.381 13.54 0.00 0.00 3.16
750 753 2.613691 CTTGCTACGTCGGTACCATTT 58.386 47.619 13.54 0.00 0.00 2.32
751 754 3.429272 CCTTGCTACGTCGGTACCATTTA 60.429 47.826 13.54 0.00 0.00 1.40
752 755 3.865011 TGCTACGTCGGTACCATTTAA 57.135 42.857 13.54 0.00 0.00 1.52
753 756 4.389890 TGCTACGTCGGTACCATTTAAT 57.610 40.909 13.54 0.00 0.00 1.40
754 757 4.362279 TGCTACGTCGGTACCATTTAATC 58.638 43.478 13.54 0.00 0.00 1.75
755 758 4.098349 TGCTACGTCGGTACCATTTAATCT 59.902 41.667 13.54 0.00 0.00 2.40
756 759 4.678742 GCTACGTCGGTACCATTTAATCTC 59.321 45.833 13.54 0.00 0.00 2.75
757 760 4.050852 ACGTCGGTACCATTTAATCTCC 57.949 45.455 13.54 0.00 0.00 3.71
758 761 3.703052 ACGTCGGTACCATTTAATCTCCT 59.297 43.478 13.54 0.00 0.00 3.69
759 762 4.202090 ACGTCGGTACCATTTAATCTCCTC 60.202 45.833 13.54 0.00 0.00 3.71
760 763 4.629092 GTCGGTACCATTTAATCTCCTCC 58.371 47.826 13.54 0.00 0.00 4.30
761 764 4.344390 GTCGGTACCATTTAATCTCCTCCT 59.656 45.833 13.54 0.00 0.00 3.69
762 765 4.587684 TCGGTACCATTTAATCTCCTCCTC 59.412 45.833 13.54 0.00 0.00 3.71
763 766 4.344102 CGGTACCATTTAATCTCCTCCTCA 59.656 45.833 13.54 0.00 0.00 3.86
764 767 5.612351 GGTACCATTTAATCTCCTCCTCAC 58.388 45.833 7.15 0.00 0.00 3.51
765 768 4.408182 ACCATTTAATCTCCTCCTCACG 57.592 45.455 0.00 0.00 0.00 4.35
766 769 3.775316 ACCATTTAATCTCCTCCTCACGT 59.225 43.478 0.00 0.00 0.00 4.49
767 770 4.960469 ACCATTTAATCTCCTCCTCACGTA 59.040 41.667 0.00 0.00 0.00 3.57
768 771 5.069251 ACCATTTAATCTCCTCCTCACGTAG 59.931 44.000 0.00 0.00 0.00 3.51
770 773 6.264744 CCATTTAATCTCCTCCTCACGTAGTA 59.735 42.308 0.00 0.00 41.61 1.82
771 774 6.939132 TTTAATCTCCTCCTCACGTAGTAG 57.061 41.667 0.00 0.00 41.61 2.57
772 775 3.495434 ATCTCCTCCTCACGTAGTAGG 57.505 52.381 4.75 4.75 41.61 3.18
773 776 1.134159 TCTCCTCCTCACGTAGTAGGC 60.134 57.143 6.01 0.00 41.61 3.93
774 777 0.463295 TCCTCCTCACGTAGTAGGCG 60.463 60.000 6.01 0.92 41.61 5.52
775 778 1.445716 CCTCCTCACGTAGTAGGCGG 61.446 65.000 5.65 5.65 41.61 6.13
776 779 1.445716 CTCCTCACGTAGTAGGCGGG 61.446 65.000 6.01 0.00 41.61 6.13
777 780 2.412112 CTCACGTAGTAGGCGGGC 59.588 66.667 0.00 0.00 41.61 6.13
778 781 2.361483 TCACGTAGTAGGCGGGCA 60.361 61.111 3.78 0.00 41.61 5.36
779 782 1.940883 CTCACGTAGTAGGCGGGCAA 61.941 60.000 3.78 0.00 41.61 4.52
780 783 1.143183 CACGTAGTAGGCGGGCAAT 59.857 57.895 3.78 0.00 41.61 3.56
781 784 0.874607 CACGTAGTAGGCGGGCAATC 60.875 60.000 3.78 0.00 41.61 2.67
782 785 1.041447 ACGTAGTAGGCGGGCAATCT 61.041 55.000 3.78 1.56 41.94 2.40
783 786 0.597637 CGTAGTAGGCGGGCAATCTG 60.598 60.000 3.78 0.00 0.00 2.90
784 787 0.880718 GTAGTAGGCGGGCAATCTGC 60.881 60.000 3.78 0.00 46.78 4.26
785 788 1.048724 TAGTAGGCGGGCAATCTGCT 61.049 55.000 3.78 0.00 46.69 4.24
786 789 1.889573 GTAGGCGGGCAATCTGCTC 60.890 63.158 3.78 0.00 46.69 4.26
793 796 2.024176 GGGCAATCTGCTCGTTAAGA 57.976 50.000 0.00 0.00 44.28 2.10
794 797 2.565841 GGGCAATCTGCTCGTTAAGAT 58.434 47.619 0.00 0.00 44.28 2.40
795 798 2.945668 GGGCAATCTGCTCGTTAAGATT 59.054 45.455 0.00 4.22 44.28 2.40
800 803 5.886960 AATCTGCTCGTTAAGATTGCTTT 57.113 34.783 7.94 0.00 40.71 3.51
801 804 5.886960 ATCTGCTCGTTAAGATTGCTTTT 57.113 34.783 0.00 0.00 35.56 2.27
802 805 5.689383 TCTGCTCGTTAAGATTGCTTTTT 57.311 34.783 0.00 0.00 35.56 1.94
821 824 5.845985 TTTTTGCTCGATCTCAACAGTAG 57.154 39.130 0.00 0.00 0.00 2.57
822 825 4.783764 TTTGCTCGATCTCAACAGTAGA 57.216 40.909 0.00 0.00 0.00 2.59
823 826 3.766676 TGCTCGATCTCAACAGTAGAC 57.233 47.619 0.00 0.00 0.00 2.59
824 827 3.081804 TGCTCGATCTCAACAGTAGACA 58.918 45.455 0.00 0.00 0.00 3.41
825 828 3.127721 TGCTCGATCTCAACAGTAGACAG 59.872 47.826 0.00 0.00 0.00 3.51
826 829 3.375610 GCTCGATCTCAACAGTAGACAGA 59.624 47.826 0.00 0.00 0.00 3.41
827 830 4.495679 GCTCGATCTCAACAGTAGACAGAG 60.496 50.000 0.00 0.00 35.04 3.35
828 831 3.942115 TCGATCTCAACAGTAGACAGAGG 59.058 47.826 0.00 0.00 0.00 3.69
829 832 3.488384 CGATCTCAACAGTAGACAGAGGC 60.488 52.174 0.00 0.00 0.00 4.70
830 833 2.171840 TCTCAACAGTAGACAGAGGCC 58.828 52.381 0.00 0.00 0.00 5.19
831 834 2.175202 CTCAACAGTAGACAGAGGCCT 58.825 52.381 3.86 3.86 0.00 5.19
832 835 2.165437 CTCAACAGTAGACAGAGGCCTC 59.835 54.545 26.22 26.22 0.00 4.70
833 836 1.895798 CAACAGTAGACAGAGGCCTCA 59.104 52.381 33.90 10.85 0.00 3.86
834 837 1.551452 ACAGTAGACAGAGGCCTCAC 58.449 55.000 33.90 22.15 0.00 3.51
835 838 0.820871 CAGTAGACAGAGGCCTCACC 59.179 60.000 33.90 21.01 39.61 4.02
844 847 3.231298 GGCCTCACCTCCGCTATT 58.769 61.111 0.00 0.00 34.51 1.73
845 848 1.527370 GGCCTCACCTCCGCTATTT 59.473 57.895 0.00 0.00 34.51 1.40
846 849 0.107165 GGCCTCACCTCCGCTATTTT 60.107 55.000 0.00 0.00 34.51 1.82
847 850 1.140252 GGCCTCACCTCCGCTATTTTA 59.860 52.381 0.00 0.00 34.51 1.52
848 851 2.224548 GGCCTCACCTCCGCTATTTTAT 60.225 50.000 0.00 0.00 34.51 1.40
849 852 3.067833 GCCTCACCTCCGCTATTTTATC 58.932 50.000 0.00 0.00 0.00 1.75
850 853 3.494398 GCCTCACCTCCGCTATTTTATCA 60.494 47.826 0.00 0.00 0.00 2.15
851 854 4.703897 CCTCACCTCCGCTATTTTATCAA 58.296 43.478 0.00 0.00 0.00 2.57
852 855 4.752101 CCTCACCTCCGCTATTTTATCAAG 59.248 45.833 0.00 0.00 0.00 3.02
853 856 4.703897 TCACCTCCGCTATTTTATCAAGG 58.296 43.478 0.00 0.00 0.00 3.61
854 857 3.815401 CACCTCCGCTATTTTATCAAGGG 59.185 47.826 0.00 0.00 0.00 3.95
855 858 3.714798 ACCTCCGCTATTTTATCAAGGGA 59.285 43.478 0.00 0.00 0.00 4.20
856 859 4.165372 ACCTCCGCTATTTTATCAAGGGAA 59.835 41.667 0.00 0.00 0.00 3.97
857 860 5.163088 ACCTCCGCTATTTTATCAAGGGAAT 60.163 40.000 0.00 0.00 0.00 3.01
858 861 5.412904 CCTCCGCTATTTTATCAAGGGAATC 59.587 44.000 0.00 0.00 0.00 2.52
859 862 5.935945 TCCGCTATTTTATCAAGGGAATCA 58.064 37.500 0.00 0.00 0.00 2.57
860 863 6.361433 TCCGCTATTTTATCAAGGGAATCAA 58.639 36.000 0.00 0.00 0.00 2.57
861 864 7.004086 TCCGCTATTTTATCAAGGGAATCAAT 58.996 34.615 0.00 0.00 0.00 2.57
862 865 7.505585 TCCGCTATTTTATCAAGGGAATCAATT 59.494 33.333 0.00 0.00 0.00 2.32
863 866 8.792633 CCGCTATTTTATCAAGGGAATCAATTA 58.207 33.333 0.00 0.00 0.00 1.40
864 867 9.831737 CGCTATTTTATCAAGGGAATCAATTAG 57.168 33.333 0.00 0.00 0.00 1.73
869 872 9.640952 TTTTATCAAGGGAATCAATTAGGGTAG 57.359 33.333 0.00 0.00 0.00 3.18
870 873 8.575736 TTATCAAGGGAATCAATTAGGGTAGA 57.424 34.615 0.00 0.00 0.00 2.59
871 874 6.248569 TCAAGGGAATCAATTAGGGTAGAC 57.751 41.667 0.00 0.00 0.00 2.59
872 875 5.729229 TCAAGGGAATCAATTAGGGTAGACA 59.271 40.000 0.00 0.00 0.00 3.41
873 876 6.216662 TCAAGGGAATCAATTAGGGTAGACAA 59.783 38.462 0.00 0.00 0.00 3.18
874 877 6.652205 AGGGAATCAATTAGGGTAGACAAA 57.348 37.500 0.00 0.00 0.00 2.83
875 878 7.226059 AGGGAATCAATTAGGGTAGACAAAT 57.774 36.000 0.00 0.00 0.00 2.32
876 879 7.062957 AGGGAATCAATTAGGGTAGACAAATG 58.937 38.462 0.00 0.00 0.00 2.32
877 880 6.239036 GGGAATCAATTAGGGTAGACAAATGC 60.239 42.308 0.00 0.00 0.00 3.56
878 881 6.321181 GGAATCAATTAGGGTAGACAAATGCA 59.679 38.462 0.00 0.00 0.00 3.96
879 882 7.147915 GGAATCAATTAGGGTAGACAAATGCAA 60.148 37.037 0.00 0.00 0.00 4.08
880 883 7.902920 ATCAATTAGGGTAGACAAATGCAAT 57.097 32.000 0.00 0.00 0.00 3.56
881 884 7.716799 TCAATTAGGGTAGACAAATGCAATT 57.283 32.000 0.00 0.00 38.98 2.32
883 886 8.592809 TCAATTAGGGTAGACAAATGCAATTTT 58.407 29.630 0.00 0.00 46.10 1.82
884 887 9.218440 CAATTAGGGTAGACAAATGCAATTTTT 57.782 29.630 0.00 0.00 46.10 1.94
885 888 9.435688 AATTAGGGTAGACAAATGCAATTTTTC 57.564 29.630 0.00 0.00 46.10 2.29
886 889 6.670695 AGGGTAGACAAATGCAATTTTTCT 57.329 33.333 12.03 12.03 46.10 2.52
895 898 9.780413 GACAAATGCAATTTTTCTTTTTGGTAA 57.220 25.926 8.12 0.00 46.10 2.85
900 903 9.964303 ATGCAATTTTTCTTTTTGGTAAATTCC 57.036 25.926 0.00 0.00 0.00 3.01
901 904 8.960591 TGCAATTTTTCTTTTTGGTAAATTCCA 58.039 25.926 0.00 0.00 35.49 3.53
902 905 9.449550 GCAATTTTTCTTTTTGGTAAATTCCAG 57.550 29.630 0.00 0.00 38.80 3.86
903 906 9.449550 CAATTTTTCTTTTTGGTAAATTCCAGC 57.550 29.630 0.00 0.00 38.80 4.85
904 907 8.744568 ATTTTTCTTTTTGGTAAATTCCAGCA 57.255 26.923 0.00 0.00 38.80 4.41
905 908 7.784633 TTTTCTTTTTGGTAAATTCCAGCAG 57.215 32.000 0.00 0.00 38.80 4.24
906 909 6.478512 TTCTTTTTGGTAAATTCCAGCAGT 57.521 33.333 0.00 0.00 38.80 4.40
907 910 7.589958 TTCTTTTTGGTAAATTCCAGCAGTA 57.410 32.000 0.00 0.00 38.80 2.74
908 911 7.775053 TCTTTTTGGTAAATTCCAGCAGTAT 57.225 32.000 0.00 0.00 38.80 2.12
909 912 7.601856 TCTTTTTGGTAAATTCCAGCAGTATG 58.398 34.615 0.00 0.00 38.80 2.39
921 924 2.724520 CAGTATGCTTGGCCCATCC 58.275 57.895 0.00 0.00 0.00 3.51
922 925 0.184451 CAGTATGCTTGGCCCATCCT 59.816 55.000 0.00 0.00 35.26 3.24
923 926 0.475906 AGTATGCTTGGCCCATCCTC 59.524 55.000 0.00 0.00 35.26 3.71
924 927 0.886490 GTATGCTTGGCCCATCCTCG 60.886 60.000 0.00 0.00 35.26 4.63
925 928 2.680974 TATGCTTGGCCCATCCTCGC 62.681 60.000 0.00 0.00 35.26 5.03
926 929 4.802051 GCTTGGCCCATCCTCGCA 62.802 66.667 0.00 0.00 35.26 5.10
927 930 2.515523 CTTGGCCCATCCTCGCAG 60.516 66.667 0.00 0.00 35.26 5.18
928 931 4.113815 TTGGCCCATCCTCGCAGG 62.114 66.667 0.00 0.00 36.46 4.85
936 939 2.798689 TCCTCGCAGGAATCGACG 59.201 61.111 2.78 0.00 42.51 5.12
937 940 2.956964 CCTCGCAGGAATCGACGC 60.957 66.667 0.00 0.00 37.67 5.19
938 941 2.202610 CTCGCAGGAATCGACGCA 60.203 61.111 0.00 0.00 32.08 5.24
939 942 1.805539 CTCGCAGGAATCGACGCAA 60.806 57.895 0.00 0.00 32.08 4.85
941 944 2.802667 CGCAGGAATCGACGCAAGG 61.803 63.158 0.00 0.00 46.39 3.61
953 956 3.272334 GCAAGGCGCGGATTCGAT 61.272 61.111 8.83 0.00 39.00 3.59
954 957 2.823829 GCAAGGCGCGGATTCGATT 61.824 57.895 8.83 0.00 39.00 3.34
955 958 1.495584 GCAAGGCGCGGATTCGATTA 61.496 55.000 8.83 0.00 39.00 1.75
956 959 1.148310 CAAGGCGCGGATTCGATTAT 58.852 50.000 8.83 0.00 39.00 1.28
957 960 1.531149 CAAGGCGCGGATTCGATTATT 59.469 47.619 8.83 0.00 39.00 1.40
958 961 2.734606 CAAGGCGCGGATTCGATTATTA 59.265 45.455 8.83 0.00 39.00 0.98
959 962 2.334838 AGGCGCGGATTCGATTATTAC 58.665 47.619 8.83 0.00 39.00 1.89
960 963 2.029290 AGGCGCGGATTCGATTATTACT 60.029 45.455 8.83 0.00 39.00 2.24
1073 7302 2.644798 ACACTACTCTTTGGCCATCCTT 59.355 45.455 6.09 0.00 0.00 3.36
1151 7386 1.332997 CAGGATCGCCTCAAGAAATGC 59.667 52.381 0.00 0.00 44.80 3.56
1170 7405 1.008538 CAAGTTCGCGCTTGGCTTT 60.009 52.632 16.00 0.00 41.41 3.51
1283 7536 2.871096 AAGATCCCGGTTTGCACTTA 57.129 45.000 0.00 0.00 0.00 2.24
1465 7736 4.100344 TCAGCAGAAACAACACTAGTACCA 59.900 41.667 0.00 0.00 0.00 3.25
1622 12709 1.064906 CAGTCACCAGGCCATCTCAAT 60.065 52.381 5.01 0.00 0.00 2.57
1644 12731 0.399091 AGAGCCTCATTGATCCGGGA 60.399 55.000 0.00 0.00 0.00 5.14
2330 13456 1.376683 TCTGGAACGGGGAATTGCG 60.377 57.895 0.00 0.00 33.92 4.85
2425 13551 7.330262 AGATTTCTTGCCAAGTTTGAGAAAAA 58.670 30.769 4.04 0.00 39.10 1.94
2521 13653 4.202377 TGGTTGTTACTGAATCGGAGGAAA 60.202 41.667 0.00 0.00 0.00 3.13
2685 13817 6.495872 TCTGTATACAAGGGAGTGTTAAGTGT 59.504 38.462 7.06 0.00 32.75 3.55
3250 20956 6.668541 ATTCTTCACCTGAAACATCATACG 57.331 37.500 0.00 0.00 33.07 3.06
3498 21219 2.158475 GGAGATTGATGTGCCCCCAATA 60.158 50.000 0.00 0.00 31.40 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
495 497 1.945394 GAGACCGCGACCAACTATCTA 59.055 52.381 8.23 0.00 0.00 1.98
608 611 2.132352 GCCGAATAGAGGGGGACGT 61.132 63.158 0.00 0.00 0.00 4.34
610 613 1.054978 AAGGCCGAATAGAGGGGGAC 61.055 60.000 0.00 0.00 0.00 4.46
614 617 0.682292 GAGGAAGGCCGAATAGAGGG 59.318 60.000 0.00 0.00 39.96 4.30
615 618 0.682292 GGAGGAAGGCCGAATAGAGG 59.318 60.000 0.00 0.00 39.96 3.69
616 619 1.342819 CAGGAGGAAGGCCGAATAGAG 59.657 57.143 0.00 0.00 39.96 2.43
617 620 1.414158 CAGGAGGAAGGCCGAATAGA 58.586 55.000 0.00 0.00 39.96 1.98
618 621 0.394565 CCAGGAGGAAGGCCGAATAG 59.605 60.000 0.00 0.00 39.96 1.73
619 622 0.326238 ACCAGGAGGAAGGCCGAATA 60.326 55.000 0.00 0.00 39.96 1.75
620 623 1.616628 ACCAGGAGGAAGGCCGAAT 60.617 57.895 0.00 0.00 39.96 3.34
621 624 2.203938 ACCAGGAGGAAGGCCGAA 60.204 61.111 0.00 0.00 39.96 4.30
622 625 2.683933 GACCAGGAGGAAGGCCGA 60.684 66.667 0.00 0.00 39.96 5.54
623 626 2.527951 CTTGACCAGGAGGAAGGCCG 62.528 65.000 0.00 0.00 39.96 6.13
624 627 1.301293 CTTGACCAGGAGGAAGGCC 59.699 63.158 0.00 0.00 38.69 5.19
633 636 2.767505 GTATATTCGCCCTTGACCAGG 58.232 52.381 0.00 0.00 43.49 4.45
634 637 2.404215 CGTATATTCGCCCTTGACCAG 58.596 52.381 0.00 0.00 0.00 4.00
635 638 2.519377 CGTATATTCGCCCTTGACCA 57.481 50.000 0.00 0.00 0.00 4.02
645 648 9.053135 GTAGACATAGAAAGAAGCGTATATTCG 57.947 37.037 0.00 0.00 0.00 3.34
646 649 9.344309 GGTAGACATAGAAAGAAGCGTATATTC 57.656 37.037 0.00 0.00 0.00 1.75
647 650 8.857098 TGGTAGACATAGAAAGAAGCGTATATT 58.143 33.333 0.00 0.00 0.00 1.28
648 651 8.405418 TGGTAGACATAGAAAGAAGCGTATAT 57.595 34.615 0.00 0.00 0.00 0.86
649 652 7.812690 TGGTAGACATAGAAAGAAGCGTATA 57.187 36.000 0.00 0.00 0.00 1.47
650 653 6.710597 TGGTAGACATAGAAAGAAGCGTAT 57.289 37.500 0.00 0.00 0.00 3.06
651 654 6.710597 ATGGTAGACATAGAAAGAAGCGTA 57.289 37.500 0.00 0.00 38.26 4.42
652 655 5.599999 ATGGTAGACATAGAAAGAAGCGT 57.400 39.130 0.00 0.00 38.26 5.07
653 656 6.019479 GTCAATGGTAGACATAGAAAGAAGCG 60.019 42.308 0.00 0.00 39.40 4.68
654 657 7.044798 AGTCAATGGTAGACATAGAAAGAAGC 58.955 38.462 0.00 0.00 39.40 3.86
655 658 9.743057 CTAGTCAATGGTAGACATAGAAAGAAG 57.257 37.037 0.00 0.00 39.40 2.85
656 659 8.198109 GCTAGTCAATGGTAGACATAGAAAGAA 58.802 37.037 0.00 0.00 39.40 2.52
657 660 7.342026 TGCTAGTCAATGGTAGACATAGAAAGA 59.658 37.037 0.00 0.00 39.40 2.52
658 661 7.492524 TGCTAGTCAATGGTAGACATAGAAAG 58.507 38.462 0.00 0.00 39.40 2.62
659 662 7.418337 TGCTAGTCAATGGTAGACATAGAAA 57.582 36.000 0.00 0.00 39.40 2.52
660 663 7.507277 AGATGCTAGTCAATGGTAGACATAGAA 59.493 37.037 0.00 0.00 39.40 2.10
661 664 7.007116 AGATGCTAGTCAATGGTAGACATAGA 58.993 38.462 0.00 0.00 39.40 1.98
662 665 7.040132 TCAGATGCTAGTCAATGGTAGACATAG 60.040 40.741 0.00 0.00 39.40 2.23
663 666 6.777580 TCAGATGCTAGTCAATGGTAGACATA 59.222 38.462 0.00 0.00 39.40 2.29
664 667 5.600069 TCAGATGCTAGTCAATGGTAGACAT 59.400 40.000 0.00 0.00 43.07 3.06
665 668 4.956075 TCAGATGCTAGTCAATGGTAGACA 59.044 41.667 0.00 0.00 38.46 3.41
666 669 5.521906 TCAGATGCTAGTCAATGGTAGAC 57.478 43.478 0.00 0.00 36.26 2.59
667 670 6.155221 ACTTTCAGATGCTAGTCAATGGTAGA 59.845 38.462 0.00 0.00 0.00 2.59
668 671 6.344500 ACTTTCAGATGCTAGTCAATGGTAG 58.656 40.000 0.00 0.00 0.00 3.18
669 672 6.299805 ACTTTCAGATGCTAGTCAATGGTA 57.700 37.500 0.00 0.00 0.00 3.25
670 673 5.171339 ACTTTCAGATGCTAGTCAATGGT 57.829 39.130 0.00 0.00 0.00 3.55
671 674 7.798596 AATACTTTCAGATGCTAGTCAATGG 57.201 36.000 0.00 0.00 0.00 3.16
672 675 8.060679 CGAAATACTTTCAGATGCTAGTCAATG 58.939 37.037 0.00 0.00 39.63 2.82
673 676 7.766278 ACGAAATACTTTCAGATGCTAGTCAAT 59.234 33.333 0.00 0.00 39.63 2.57
674 677 7.097192 ACGAAATACTTTCAGATGCTAGTCAA 58.903 34.615 0.00 0.00 39.63 3.18
675 678 6.631016 ACGAAATACTTTCAGATGCTAGTCA 58.369 36.000 0.00 0.00 39.63 3.41
676 679 8.804688 ATACGAAATACTTTCAGATGCTAGTC 57.195 34.615 0.00 0.00 39.63 2.59
680 683 9.764363 TGATAATACGAAATACTTTCAGATGCT 57.236 29.630 0.00 0.00 39.63 3.79
689 692 9.832445 ACAAGGTGATGATAATACGAAATACTT 57.168 29.630 0.00 0.00 0.00 2.24
695 698 9.740239 GTTAGTACAAGGTGATGATAATACGAA 57.260 33.333 0.00 0.00 0.00 3.85
696 699 8.071967 CGTTAGTACAAGGTGATGATAATACGA 58.928 37.037 0.00 0.00 0.00 3.43
697 700 8.071967 TCGTTAGTACAAGGTGATGATAATACG 58.928 37.037 0.00 0.00 0.00 3.06
698 701 9.740239 TTCGTTAGTACAAGGTGATGATAATAC 57.260 33.333 0.00 0.00 0.00 1.89
700 703 9.477484 GATTCGTTAGTACAAGGTGATGATAAT 57.523 33.333 0.00 0.00 0.00 1.28
701 704 7.924412 GGATTCGTTAGTACAAGGTGATGATAA 59.076 37.037 0.00 0.00 0.00 1.75
702 705 7.431249 GGATTCGTTAGTACAAGGTGATGATA 58.569 38.462 0.00 0.00 0.00 2.15
703 706 6.281405 GGATTCGTTAGTACAAGGTGATGAT 58.719 40.000 0.00 0.00 0.00 2.45
704 707 5.657474 GGATTCGTTAGTACAAGGTGATGA 58.343 41.667 0.00 0.00 0.00 2.92
705 708 4.503007 CGGATTCGTTAGTACAAGGTGATG 59.497 45.833 0.00 0.00 0.00 3.07
706 709 4.679662 CGGATTCGTTAGTACAAGGTGAT 58.320 43.478 0.00 0.00 0.00 3.06
707 710 3.674138 GCGGATTCGTTAGTACAAGGTGA 60.674 47.826 0.00 0.00 38.89 4.02
708 711 2.601763 GCGGATTCGTTAGTACAAGGTG 59.398 50.000 0.00 0.00 38.89 4.00
709 712 2.417787 GGCGGATTCGTTAGTACAAGGT 60.418 50.000 0.00 0.00 38.89 3.50
710 713 2.159142 AGGCGGATTCGTTAGTACAAGG 60.159 50.000 0.00 0.00 38.89 3.61
711 714 3.160777 AGGCGGATTCGTTAGTACAAG 57.839 47.619 0.00 0.00 38.89 3.16
712 715 3.255725 CAAGGCGGATTCGTTAGTACAA 58.744 45.455 0.00 0.00 38.89 2.41
713 716 2.883574 CAAGGCGGATTCGTTAGTACA 58.116 47.619 0.00 0.00 38.89 2.90
714 717 1.591619 GCAAGGCGGATTCGTTAGTAC 59.408 52.381 0.00 0.00 38.89 2.73
715 718 1.479323 AGCAAGGCGGATTCGTTAGTA 59.521 47.619 0.00 0.00 38.89 1.82
716 719 0.249398 AGCAAGGCGGATTCGTTAGT 59.751 50.000 0.00 0.00 38.89 2.24
717 720 1.859080 GTAGCAAGGCGGATTCGTTAG 59.141 52.381 0.00 0.00 38.89 2.34
718 721 1.799917 CGTAGCAAGGCGGATTCGTTA 60.800 52.381 0.00 0.00 38.89 3.18
719 722 1.082117 CGTAGCAAGGCGGATTCGTT 61.082 55.000 0.00 0.00 38.89 3.85
720 723 1.518572 CGTAGCAAGGCGGATTCGT 60.519 57.895 0.00 0.00 38.89 3.85
721 724 1.480219 GACGTAGCAAGGCGGATTCG 61.480 60.000 0.00 0.00 39.81 3.34
722 725 1.480219 CGACGTAGCAAGGCGGATTC 61.480 60.000 0.00 0.00 0.00 2.52
723 726 1.518572 CGACGTAGCAAGGCGGATT 60.519 57.895 0.00 0.00 0.00 3.01
724 727 2.104331 CGACGTAGCAAGGCGGAT 59.896 61.111 0.00 0.00 0.00 4.18
725 728 4.124351 CCGACGTAGCAAGGCGGA 62.124 66.667 14.09 0.00 44.43 5.54
726 729 3.055080 TACCGACGTAGCAAGGCGG 62.055 63.158 17.04 17.04 46.83 6.13
727 730 1.870901 GTACCGACGTAGCAAGGCG 60.871 63.158 0.00 0.00 0.00 5.52
728 731 1.517913 GGTACCGACGTAGCAAGGC 60.518 63.158 0.00 0.00 41.65 4.35
729 732 4.800355 GGTACCGACGTAGCAAGG 57.200 61.111 0.00 0.00 41.65 3.61
733 736 4.614946 AGATTAAATGGTACCGACGTAGC 58.385 43.478 7.57 0.00 42.24 3.58
734 737 5.009410 AGGAGATTAAATGGTACCGACGTAG 59.991 44.000 7.57 0.00 0.00 3.51
735 738 4.889409 AGGAGATTAAATGGTACCGACGTA 59.111 41.667 7.57 0.00 0.00 3.57
736 739 3.703052 AGGAGATTAAATGGTACCGACGT 59.297 43.478 7.57 0.00 0.00 4.34
737 740 4.296690 GAGGAGATTAAATGGTACCGACG 58.703 47.826 7.57 0.00 0.00 5.12
738 741 4.344390 AGGAGGAGATTAAATGGTACCGAC 59.656 45.833 7.57 0.00 0.00 4.79
739 742 4.553678 AGGAGGAGATTAAATGGTACCGA 58.446 43.478 7.57 0.00 0.00 4.69
740 743 4.344102 TGAGGAGGAGATTAAATGGTACCG 59.656 45.833 7.57 0.00 0.00 4.02
741 744 5.612351 GTGAGGAGGAGATTAAATGGTACC 58.388 45.833 4.43 4.43 0.00 3.34
742 745 5.163437 ACGTGAGGAGGAGATTAAATGGTAC 60.163 44.000 0.00 0.00 0.00 3.34
743 746 4.960469 ACGTGAGGAGGAGATTAAATGGTA 59.040 41.667 0.00 0.00 0.00 3.25
744 747 3.775316 ACGTGAGGAGGAGATTAAATGGT 59.225 43.478 0.00 0.00 0.00 3.55
745 748 4.408182 ACGTGAGGAGGAGATTAAATGG 57.592 45.455 0.00 0.00 0.00 3.16
758 761 1.452651 CCCGCCTACTACGTGAGGA 60.453 63.158 15.06 0.00 34.46 3.71
759 762 3.117372 CCCGCCTACTACGTGAGG 58.883 66.667 0.00 3.21 35.78 3.86
760 763 1.940883 TTGCCCGCCTACTACGTGAG 61.941 60.000 0.00 0.00 0.00 3.51
761 764 1.324740 ATTGCCCGCCTACTACGTGA 61.325 55.000 0.00 0.00 0.00 4.35
762 765 0.874607 GATTGCCCGCCTACTACGTG 60.875 60.000 0.00 0.00 0.00 4.49
763 766 1.041447 AGATTGCCCGCCTACTACGT 61.041 55.000 0.00 0.00 0.00 3.57
764 767 0.597637 CAGATTGCCCGCCTACTACG 60.598 60.000 0.00 0.00 0.00 3.51
765 768 0.880718 GCAGATTGCCCGCCTACTAC 60.881 60.000 0.00 0.00 37.42 2.73
766 769 1.048724 AGCAGATTGCCCGCCTACTA 61.049 55.000 0.00 0.00 46.52 1.82
767 770 2.190578 GCAGATTGCCCGCCTACT 59.809 61.111 0.00 0.00 37.42 2.57
768 771 1.889573 GAGCAGATTGCCCGCCTAC 60.890 63.158 0.00 0.00 46.52 3.18
769 772 2.505982 GAGCAGATTGCCCGCCTA 59.494 61.111 0.00 0.00 46.52 3.93
770 773 4.845580 CGAGCAGATTGCCCGCCT 62.846 66.667 0.00 0.00 46.52 5.52
774 777 2.024176 TCTTAACGAGCAGATTGCCC 57.976 50.000 0.00 0.00 46.52 5.36
775 778 3.945179 CAATCTTAACGAGCAGATTGCC 58.055 45.455 16.59 0.00 45.78 4.52
778 781 5.886960 AAAGCAATCTTAACGAGCAGATT 57.113 34.783 0.00 0.00 39.83 2.40
779 782 5.886960 AAAAGCAATCTTAACGAGCAGAT 57.113 34.783 0.00 0.00 31.02 2.90
780 783 5.689383 AAAAAGCAATCTTAACGAGCAGA 57.311 34.783 0.00 0.00 31.02 4.26
799 802 5.405571 GTCTACTGTTGAGATCGAGCAAAAA 59.594 40.000 2.38 0.00 0.00 1.94
800 803 4.923871 GTCTACTGTTGAGATCGAGCAAAA 59.076 41.667 2.38 0.00 0.00 2.44
801 804 4.022329 TGTCTACTGTTGAGATCGAGCAAA 60.022 41.667 2.38 0.00 0.00 3.68
802 805 3.506067 TGTCTACTGTTGAGATCGAGCAA 59.494 43.478 2.38 0.00 0.00 3.91
803 806 3.081804 TGTCTACTGTTGAGATCGAGCA 58.918 45.455 2.38 0.00 0.00 4.26
804 807 3.375610 TCTGTCTACTGTTGAGATCGAGC 59.624 47.826 0.00 0.00 0.00 5.03
805 808 4.035091 CCTCTGTCTACTGTTGAGATCGAG 59.965 50.000 0.00 0.00 0.00 4.04
806 809 3.942115 CCTCTGTCTACTGTTGAGATCGA 59.058 47.826 0.00 0.00 0.00 3.59
807 810 3.488384 GCCTCTGTCTACTGTTGAGATCG 60.488 52.174 0.00 0.00 0.00 3.69
808 811 3.181480 GGCCTCTGTCTACTGTTGAGATC 60.181 52.174 0.00 0.00 0.00 2.75
809 812 2.763448 GGCCTCTGTCTACTGTTGAGAT 59.237 50.000 0.00 0.00 0.00 2.75
810 813 2.171840 GGCCTCTGTCTACTGTTGAGA 58.828 52.381 0.00 0.00 0.00 3.27
811 814 2.165437 GAGGCCTCTGTCTACTGTTGAG 59.835 54.545 26.25 0.00 0.00 3.02
812 815 2.171840 GAGGCCTCTGTCTACTGTTGA 58.828 52.381 26.25 0.00 0.00 3.18
813 816 1.895798 TGAGGCCTCTGTCTACTGTTG 59.104 52.381 32.28 0.00 0.00 3.33
814 817 1.896465 GTGAGGCCTCTGTCTACTGTT 59.104 52.381 32.28 0.00 0.00 3.16
815 818 1.551452 GTGAGGCCTCTGTCTACTGT 58.449 55.000 32.28 0.00 0.00 3.55
816 819 0.820871 GGTGAGGCCTCTGTCTACTG 59.179 60.000 32.28 0.00 0.00 2.74
817 820 0.707616 AGGTGAGGCCTCTGTCTACT 59.292 55.000 32.28 17.52 46.96 2.57
818 821 3.291497 AGGTGAGGCCTCTGTCTAC 57.709 57.895 32.28 21.22 46.96 2.59
827 830 0.107165 AAAATAGCGGAGGTGAGGCC 60.107 55.000 0.00 0.00 40.22 5.19
828 831 2.614829 TAAAATAGCGGAGGTGAGGC 57.385 50.000 0.00 0.00 40.22 4.70
829 832 4.336889 TGATAAAATAGCGGAGGTGAGG 57.663 45.455 0.00 0.00 40.22 3.86
830 833 4.752101 CCTTGATAAAATAGCGGAGGTGAG 59.248 45.833 0.00 0.00 40.22 3.51
831 834 4.444306 CCCTTGATAAAATAGCGGAGGTGA 60.444 45.833 0.00 0.00 40.22 4.02
832 835 3.815401 CCCTTGATAAAATAGCGGAGGTG 59.185 47.826 0.00 0.00 40.22 4.00
833 836 3.714798 TCCCTTGATAAAATAGCGGAGGT 59.285 43.478 0.00 0.00 44.89 3.85
834 837 4.351874 TCCCTTGATAAAATAGCGGAGG 57.648 45.455 0.00 0.00 0.00 4.30
835 838 5.997746 TGATTCCCTTGATAAAATAGCGGAG 59.002 40.000 0.00 0.00 0.00 4.63
836 839 5.935945 TGATTCCCTTGATAAAATAGCGGA 58.064 37.500 0.00 0.00 0.00 5.54
837 840 6.633500 TTGATTCCCTTGATAAAATAGCGG 57.367 37.500 0.00 0.00 0.00 5.52
838 841 9.831737 CTAATTGATTCCCTTGATAAAATAGCG 57.168 33.333 0.00 0.00 0.00 4.26
843 846 9.640952 CTACCCTAATTGATTCCCTTGATAAAA 57.359 33.333 0.00 0.00 0.00 1.52
844 847 9.009675 TCTACCCTAATTGATTCCCTTGATAAA 57.990 33.333 0.00 0.00 0.00 1.40
845 848 8.437575 GTCTACCCTAATTGATTCCCTTGATAA 58.562 37.037 0.00 0.00 0.00 1.75
846 849 7.570982 TGTCTACCCTAATTGATTCCCTTGATA 59.429 37.037 0.00 0.00 0.00 2.15
847 850 6.389869 TGTCTACCCTAATTGATTCCCTTGAT 59.610 38.462 0.00 0.00 0.00 2.57
848 851 5.729229 TGTCTACCCTAATTGATTCCCTTGA 59.271 40.000 0.00 0.00 0.00 3.02
849 852 6.001449 TGTCTACCCTAATTGATTCCCTTG 57.999 41.667 0.00 0.00 0.00 3.61
850 853 6.652205 TTGTCTACCCTAATTGATTCCCTT 57.348 37.500 0.00 0.00 0.00 3.95
851 854 6.652205 TTTGTCTACCCTAATTGATTCCCT 57.348 37.500 0.00 0.00 0.00 4.20
852 855 6.239036 GCATTTGTCTACCCTAATTGATTCCC 60.239 42.308 0.00 0.00 0.00 3.97
853 856 6.321181 TGCATTTGTCTACCCTAATTGATTCC 59.679 38.462 0.00 0.00 0.00 3.01
854 857 7.333528 TGCATTTGTCTACCCTAATTGATTC 57.666 36.000 0.00 0.00 0.00 2.52
855 858 7.716799 TTGCATTTGTCTACCCTAATTGATT 57.283 32.000 0.00 0.00 0.00 2.57
856 859 7.902920 ATTGCATTTGTCTACCCTAATTGAT 57.097 32.000 0.00 0.00 0.00 2.57
857 860 7.716799 AATTGCATTTGTCTACCCTAATTGA 57.283 32.000 0.00 0.00 0.00 2.57
858 861 8.776376 AAAATTGCATTTGTCTACCCTAATTG 57.224 30.769 0.00 0.00 31.77 2.32
859 862 9.435688 GAAAAATTGCATTTGTCTACCCTAATT 57.564 29.630 0.00 0.00 34.39 1.40
860 863 8.815912 AGAAAAATTGCATTTGTCTACCCTAAT 58.184 29.630 10.70 0.00 43.29 1.73
861 864 8.189119 AGAAAAATTGCATTTGTCTACCCTAA 57.811 30.769 10.70 0.00 43.29 2.69
862 865 7.775053 AGAAAAATTGCATTTGTCTACCCTA 57.225 32.000 10.70 0.00 43.29 3.53
863 866 6.670695 AGAAAAATTGCATTTGTCTACCCT 57.329 33.333 10.70 0.00 43.29 4.34
864 867 7.728847 AAAGAAAAATTGCATTTGTCTACCC 57.271 32.000 12.06 0.00 44.10 3.69
865 868 9.437045 CAAAAAGAAAAATTGCATTTGTCTACC 57.563 29.630 12.06 0.00 44.10 3.18
866 869 9.437045 CCAAAAAGAAAAATTGCATTTGTCTAC 57.563 29.630 12.06 0.00 44.10 2.59
867 870 9.171877 ACCAAAAAGAAAAATTGCATTTGTCTA 57.828 25.926 12.06 0.00 44.10 2.59
868 871 8.054152 ACCAAAAAGAAAAATTGCATTTGTCT 57.946 26.923 7.91 7.91 46.20 3.41
869 872 9.780413 TTACCAAAAAGAAAAATTGCATTTGTC 57.220 25.926 0.00 0.00 36.87 3.18
874 877 9.964303 GGAATTTACCAAAAAGAAAAATTGCAT 57.036 25.926 0.00 0.00 37.62 3.96
875 878 8.960591 TGGAATTTACCAAAAAGAAAAATTGCA 58.039 25.926 8.36 8.36 42.03 4.08
876 879 9.449550 CTGGAATTTACCAAAAAGAAAAATTGC 57.550 29.630 0.00 0.00 39.59 3.56
877 880 9.449550 GCTGGAATTTACCAAAAAGAAAAATTG 57.550 29.630 0.00 0.00 39.59 2.32
878 881 9.183368 TGCTGGAATTTACCAAAAAGAAAAATT 57.817 25.926 0.00 0.00 39.59 1.82
879 882 8.744568 TGCTGGAATTTACCAAAAAGAAAAAT 57.255 26.923 0.00 0.00 39.59 1.82
880 883 7.826744 ACTGCTGGAATTTACCAAAAAGAAAAA 59.173 29.630 0.00 0.00 39.59 1.94
881 884 7.334858 ACTGCTGGAATTTACCAAAAAGAAAA 58.665 30.769 0.00 0.00 39.59 2.29
882 885 6.883744 ACTGCTGGAATTTACCAAAAAGAAA 58.116 32.000 0.00 0.00 39.59 2.52
883 886 6.478512 ACTGCTGGAATTTACCAAAAAGAA 57.521 33.333 0.00 0.00 39.59 2.52
884 887 7.601856 CATACTGCTGGAATTTACCAAAAAGA 58.398 34.615 0.00 0.00 39.59 2.52
885 888 6.311200 GCATACTGCTGGAATTTACCAAAAAG 59.689 38.462 0.00 0.00 40.96 2.27
886 889 6.162777 GCATACTGCTGGAATTTACCAAAAA 58.837 36.000 0.00 0.00 40.96 1.94
887 890 5.719173 GCATACTGCTGGAATTTACCAAAA 58.281 37.500 0.00 0.00 40.96 2.44
888 891 5.323371 GCATACTGCTGGAATTTACCAAA 57.677 39.130 0.00 0.00 40.96 3.28
889 892 4.981806 GCATACTGCTGGAATTTACCAA 57.018 40.909 0.00 0.00 40.96 3.67
902 905 1.458639 GGATGGGCCAAGCATACTGC 61.459 60.000 11.89 0.00 39.31 4.40
903 906 0.184451 AGGATGGGCCAAGCATACTG 59.816 55.000 11.89 0.00 40.02 2.74
904 907 0.475906 GAGGATGGGCCAAGCATACT 59.524 55.000 11.89 4.74 40.02 2.12
905 908 0.886490 CGAGGATGGGCCAAGCATAC 60.886 60.000 11.89 0.00 40.02 2.39
906 909 1.451504 CGAGGATGGGCCAAGCATA 59.548 57.895 11.89 0.00 40.02 3.14
907 910 2.194056 CGAGGATGGGCCAAGCAT 59.806 61.111 11.89 2.80 40.02 3.79
908 911 4.802051 GCGAGGATGGGCCAAGCA 62.802 66.667 11.89 0.00 39.92 3.91
909 912 4.802051 TGCGAGGATGGGCCAAGC 62.802 66.667 11.89 12.13 40.02 4.01
910 913 2.515523 CTGCGAGGATGGGCCAAG 60.516 66.667 11.89 0.00 40.02 3.61
911 914 4.113815 CCTGCGAGGATGGGCCAA 62.114 66.667 11.89 0.00 37.67 4.52
913 916 3.125376 ATTCCTGCGAGGATGGGCC 62.125 63.158 0.00 0.00 45.34 5.80
914 917 1.599240 GATTCCTGCGAGGATGGGC 60.599 63.158 5.83 0.00 45.34 5.36
915 918 1.301244 CGATTCCTGCGAGGATGGG 60.301 63.158 5.83 0.00 45.34 4.00
916 919 0.598680 GTCGATTCCTGCGAGGATGG 60.599 60.000 5.83 0.46 45.34 3.51
917 920 0.936764 CGTCGATTCCTGCGAGGATG 60.937 60.000 5.83 1.19 45.34 3.51
918 921 1.360551 CGTCGATTCCTGCGAGGAT 59.639 57.895 5.83 0.00 45.34 3.24
919 922 2.798689 CGTCGATTCCTGCGAGGA 59.201 61.111 0.00 1.25 44.10 3.71
920 923 2.956964 GCGTCGATTCCTGCGAGG 60.957 66.667 0.00 0.00 43.92 4.63
921 924 1.746727 CTTGCGTCGATTCCTGCGAG 61.747 60.000 0.00 0.00 38.59 5.03
922 925 1.805539 CTTGCGTCGATTCCTGCGA 60.806 57.895 0.00 0.00 35.08 5.10
923 926 2.697425 CTTGCGTCGATTCCTGCG 59.303 61.111 0.00 0.00 0.00 5.18
924 927 3.093278 CCTTGCGTCGATTCCTGC 58.907 61.111 0.00 0.00 0.00 4.85
925 928 3.093278 GCCTTGCGTCGATTCCTG 58.907 61.111 0.00 0.00 0.00 3.86
936 939 1.495584 TAATCGAATCCGCGCCTTGC 61.496 55.000 0.00 0.00 41.47 4.01
937 940 1.148310 ATAATCGAATCCGCGCCTTG 58.852 50.000 0.00 0.00 35.37 3.61
938 941 1.878953 AATAATCGAATCCGCGCCTT 58.121 45.000 0.00 0.00 35.37 4.35
939 942 2.029290 AGTAATAATCGAATCCGCGCCT 60.029 45.455 0.00 0.00 35.37 5.52
940 943 2.334838 AGTAATAATCGAATCCGCGCC 58.665 47.619 0.00 0.00 35.37 6.53
941 944 3.916172 TGTAGTAATAATCGAATCCGCGC 59.084 43.478 0.00 0.00 35.37 6.86
942 945 4.322804 GGTGTAGTAATAATCGAATCCGCG 59.677 45.833 0.00 0.00 35.37 6.46
943 946 5.467705 AGGTGTAGTAATAATCGAATCCGC 58.532 41.667 0.00 0.00 35.37 5.54
944 947 7.368833 AGAAGGTGTAGTAATAATCGAATCCG 58.631 38.462 0.00 0.00 37.07 4.18
945 948 9.194271 GAAGAAGGTGTAGTAATAATCGAATCC 57.806 37.037 0.00 0.00 0.00 3.01
946 949 9.194271 GGAAGAAGGTGTAGTAATAATCGAATC 57.806 37.037 0.00 0.00 0.00 2.52
947 950 8.925338 AGGAAGAAGGTGTAGTAATAATCGAAT 58.075 33.333 0.00 0.00 0.00 3.34
948 951 8.302515 AGGAAGAAGGTGTAGTAATAATCGAA 57.697 34.615 0.00 0.00 0.00 3.71
949 952 7.893124 AGGAAGAAGGTGTAGTAATAATCGA 57.107 36.000 0.00 0.00 0.00 3.59
950 953 8.414778 AGAAGGAAGAAGGTGTAGTAATAATCG 58.585 37.037 0.00 0.00 0.00 3.34
951 954 9.752961 GAGAAGGAAGAAGGTGTAGTAATAATC 57.247 37.037 0.00 0.00 0.00 1.75
952 955 8.706521 GGAGAAGGAAGAAGGTGTAGTAATAAT 58.293 37.037 0.00 0.00 0.00 1.28
953 956 7.676893 TGGAGAAGGAAGAAGGTGTAGTAATAA 59.323 37.037 0.00 0.00 0.00 1.40
954 957 7.186972 TGGAGAAGGAAGAAGGTGTAGTAATA 58.813 38.462 0.00 0.00 0.00 0.98
955 958 6.023603 TGGAGAAGGAAGAAGGTGTAGTAAT 58.976 40.000 0.00 0.00 0.00 1.89
956 959 5.399991 TGGAGAAGGAAGAAGGTGTAGTAA 58.600 41.667 0.00 0.00 0.00 2.24
957 960 5.006896 TGGAGAAGGAAGAAGGTGTAGTA 57.993 43.478 0.00 0.00 0.00 1.82
958 961 3.858135 TGGAGAAGGAAGAAGGTGTAGT 58.142 45.455 0.00 0.00 0.00 2.73
959 962 4.891992 TTGGAGAAGGAAGAAGGTGTAG 57.108 45.455 0.00 0.00 0.00 2.74
960 963 5.843019 ATTTGGAGAAGGAAGAAGGTGTA 57.157 39.130 0.00 0.00 0.00 2.90
1073 7302 5.710513 ATCATTGTTTGCAGCTACAAAGA 57.289 34.783 12.46 8.75 40.07 2.52
1139 7374 2.669391 GCGAACTTGGCATTTCTTGAGG 60.669 50.000 7.52 0.00 0.00 3.86
1170 7405 1.682854 CTTGCTGGCTGGAACTGAAAA 59.317 47.619 0.00 0.00 0.00 2.29
1283 7536 5.551583 TGATCCCTATTAGCAACCCATACAT 59.448 40.000 0.00 0.00 0.00 2.29
1622 12709 1.139654 CCGGATCAATGAGGCTCTTCA 59.860 52.381 16.72 0.00 0.00 3.02
1911 13019 9.077885 TCTTGTGACCAAAGATTAAGCTTTATT 57.922 29.630 17.72 8.21 36.39 1.40
2330 13456 6.411630 TGCCGTTGTTCATATTTACACTAC 57.588 37.500 0.00 0.00 0.00 2.73
2521 13653 3.243839 GCAGACCACACCACATGAATTTT 60.244 43.478 0.00 0.00 0.00 1.82
2685 13817 6.020971 TCACTGCTACAATAGTCTTCGAAA 57.979 37.500 0.00 0.00 0.00 3.46
3250 20956 0.795085 CTGTTGCTGCTGCTAGTGTC 59.205 55.000 17.00 0.00 40.48 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.