Multiple sequence alignment - TraesCS1D01G012600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G012600 chr1D 100.000 2345 0 0 1 2345 6549453 6547109 0.000000e+00 4331.0
1 TraesCS1D01G012600 chr1D 77.806 392 55 22 973 1344 33712277 33712656 1.830000e-51 213.0
2 TraesCS1D01G012600 chr1D 86.224 196 19 3 1156 1344 33663994 33664188 3.050000e-49 206.0
3 TraesCS1D01G012600 chr1D 98.333 60 1 0 2285 2344 290451163 290451104 3.190000e-19 106.0
4 TraesCS1D01G012600 chr1A 89.715 982 58 14 4 965 7961434 7962392 0.000000e+00 1214.0
5 TraesCS1D01G012600 chr1A 88.203 551 34 12 974 1498 7962444 7962989 1.530000e-176 628.0
6 TraesCS1D01G012600 chr1A 81.959 388 43 20 974 1349 7642682 7643054 1.050000e-78 303.0
7 TraesCS1D01G012600 chr1A 85.859 198 16 7 1156 1344 32451562 32451756 1.420000e-47 200.0
8 TraesCS1D01G012600 chr1A 80.876 251 24 11 628 874 7642286 7642516 2.400000e-40 176.0
9 TraesCS1D01G012600 chr6D 94.624 279 14 1 1816 2093 457285866 457286144 4.630000e-117 431.0
10 TraesCS1D01G012600 chr6D 91.503 153 11 1 2127 2279 457287432 457287582 2.360000e-50 209.0
11 TraesCS1D01G012600 chr6D 98.413 63 0 1 2284 2345 15530236 15530174 2.460000e-20 110.0
12 TraesCS1D01G012600 chr1B 84.304 395 31 24 974 1350 8658578 8658959 7.970000e-95 357.0
13 TraesCS1D01G012600 chr1B 86.449 214 20 6 1139 1344 51590245 51590457 2.340000e-55 226.0
14 TraesCS1D01G012600 chr1B 84.694 196 22 3 1156 1344 51300087 51300281 3.080000e-44 189.0
15 TraesCS1D01G012600 chr1B 98.413 63 1 0 2282 2344 683447280 683447342 6.850000e-21 111.0
16 TraesCS1D01G012600 chr6B 83.590 195 22 6 1158 1344 80970057 80970249 8.610000e-40 174.0
17 TraesCS1D01G012600 chr2D 86.861 137 14 4 1859 1992 11050539 11050404 1.450000e-32 150.0
18 TraesCS1D01G012600 chrUn 81.675 191 23 8 138 324 424237778 424237960 5.220000e-32 148.0
19 TraesCS1D01G012600 chr5A 81.675 191 23 8 138 324 687381105 687381287 5.220000e-32 148.0
20 TraesCS1D01G012600 chr3B 95.652 69 3 0 2277 2345 559755963 559755895 6.850000e-21 111.0
21 TraesCS1D01G012600 chr5B 98.361 61 1 0 2285 2345 312916828 312916768 8.860000e-20 108.0
22 TraesCS1D01G012600 chr4D 96.875 64 2 0 2281 2344 98299594 98299531 8.860000e-20 108.0
23 TraesCS1D01G012600 chr2A 95.385 65 2 1 2281 2345 10588493 10588556 4.120000e-18 102.0
24 TraesCS1D01G012600 chr2A 95.385 65 2 1 2281 2345 10589356 10589419 4.120000e-18 102.0
25 TraesCS1D01G012600 chr2A 88.095 84 9 1 2262 2344 686175224 686175307 5.330000e-17 99.0
26 TraesCS1D01G012600 chr7D 87.931 58 3 3 183 239 5410923 5410977 5.410000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G012600 chr1D 6547109 6549453 2344 True 4331.0 4331 100.0000 1 2345 1 chr1D.!!$R1 2344
1 TraesCS1D01G012600 chr1A 7961434 7962989 1555 False 921.0 1214 88.9590 4 1498 2 chr1A.!!$F3 1494
2 TraesCS1D01G012600 chr1A 7642286 7643054 768 False 239.5 303 81.4175 628 1349 2 chr1A.!!$F2 721
3 TraesCS1D01G012600 chr6D 457285866 457287582 1716 False 320.0 431 93.0635 1816 2279 2 chr6D.!!$F1 463

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
167 168 0.234884 GTTCGTGCTCAAGGGAAACG 59.765 55.0 0.0 0.0 35.56 3.6 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1621 1781 0.10741 TTGCATATGGGTGTCCGTCC 60.107 55.0 4.56 0.0 35.24 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 4.552365 CCATGCACGAGGGCGGAT 62.552 66.667 0.00 0.00 43.17 4.18
32 33 4.148825 GCACGAGGGCGGATGACT 62.149 66.667 0.00 0.00 43.17 3.41
33 34 2.782222 GCACGAGGGCGGATGACTA 61.782 63.158 0.00 0.00 43.17 2.59
38 39 1.686325 GAGGGCGGATGACTAGGCAA 61.686 60.000 0.13 0.00 0.00 4.52
45 46 2.348666 CGGATGACTAGGCAAGAAAACG 59.651 50.000 0.13 0.00 0.00 3.60
86 87 2.359975 GGAGCTGGTTTCGTGGGG 60.360 66.667 0.00 0.00 0.00 4.96
107 108 1.670406 CTGCGTTGCTGAGAGGCTT 60.670 57.895 0.00 0.00 0.00 4.35
109 110 0.819259 TGCGTTGCTGAGAGGCTTTT 60.819 50.000 0.00 0.00 0.00 2.27
115 116 3.045601 TGCTGAGAGGCTTTTAGTCAC 57.954 47.619 0.00 0.00 0.00 3.67
138 139 1.951602 TGTACTGCTCGTGTGTGTAGT 59.048 47.619 0.00 0.00 38.02 2.73
139 140 2.287368 TGTACTGCTCGTGTGTGTAGTG 60.287 50.000 0.00 0.00 35.70 2.74
143 144 0.944311 GCTCGTGTGTGTAGTGTGGG 60.944 60.000 0.00 0.00 0.00 4.61
153 154 1.758280 TGTAGTGTGGGTTGAGTTCGT 59.242 47.619 0.00 0.00 0.00 3.85
164 165 0.756294 TGAGTTCGTGCTCAAGGGAA 59.244 50.000 8.71 0.00 41.93 3.97
166 167 1.531578 GAGTTCGTGCTCAAGGGAAAC 59.468 52.381 4.59 0.00 35.67 2.78
167 168 0.234884 GTTCGTGCTCAAGGGAAACG 59.765 55.000 0.00 0.00 35.56 3.60
168 169 1.503818 TTCGTGCTCAAGGGAAACGC 61.504 55.000 0.00 0.00 34.73 4.84
170 171 2.668212 TGCTCAAGGGAAACGCCG 60.668 61.111 0.00 0.00 37.63 6.46
177 179 4.379143 GGGAAACGCCGTTGTCGC 62.379 66.667 1.95 8.19 37.63 5.19
211 213 0.885596 CGCCAGGAAAAACCACCGTA 60.886 55.000 0.00 0.00 42.04 4.02
233 235 3.041946 TCCTATGCCTTCTTCTTCCCTC 58.958 50.000 0.00 0.00 0.00 4.30
248 250 1.076438 CCCTCCTTCCTCCTTGGTTT 58.924 55.000 0.00 0.00 37.07 3.27
264 266 2.037772 TGGTTTGAGCCAGAGAGAGAAC 59.962 50.000 0.00 0.00 33.97 3.01
289 291 2.158667 GGAGGGAGACAGAGAGAGGTAG 60.159 59.091 0.00 0.00 0.00 3.18
290 292 2.508300 GAGGGAGACAGAGAGAGGTAGT 59.492 54.545 0.00 0.00 0.00 2.73
291 293 2.241176 AGGGAGACAGAGAGAGGTAGTG 59.759 54.545 0.00 0.00 0.00 2.74
292 294 2.650322 GGAGACAGAGAGAGGTAGTGG 58.350 57.143 0.00 0.00 0.00 4.00
293 295 2.025699 GGAGACAGAGAGAGGTAGTGGT 60.026 54.545 0.00 0.00 0.00 4.16
294 296 3.200385 GGAGACAGAGAGAGGTAGTGGTA 59.800 52.174 0.00 0.00 0.00 3.25
324 326 4.452733 GCTACGGCAAGGGCTCGT 62.453 66.667 7.95 7.95 44.85 4.18
344 346 3.540617 GTTTCCAACACTGCCCATTTTT 58.459 40.909 0.00 0.00 0.00 1.94
365 367 2.863809 AGCGTCTGAAAATGGTCCTTT 58.136 42.857 0.00 0.00 0.00 3.11
367 369 3.253432 AGCGTCTGAAAATGGTCCTTTTC 59.747 43.478 14.67 14.67 42.72 2.29
374 376 5.901552 TGAAAATGGTCCTTTTCTGTCAAC 58.098 37.500 18.98 2.57 42.80 3.18
394 396 0.464870 TTCGAGGACAAACGGACCAA 59.535 50.000 0.00 0.00 33.38 3.67
397 399 1.670791 GAGGACAAACGGACCAAACA 58.329 50.000 0.00 0.00 33.38 2.83
402 404 0.378962 CAAACGGACCAAACAAGCGA 59.621 50.000 0.00 0.00 0.00 4.93
459 465 7.757941 TTCATGGTGTGAGATTTACAATTGA 57.242 32.000 13.59 0.00 38.29 2.57
568 574 1.094785 GGTGACCACATTTGATCGGG 58.905 55.000 0.00 0.00 0.00 5.14
603 610 2.602257 TCCATGTCTATCCGCTTGTG 57.398 50.000 0.00 0.00 0.00 3.33
619 626 3.191162 GCTTGTGGTCTTGTCAATGCATA 59.809 43.478 0.00 0.00 0.00 3.14
628 635 7.014134 TGGTCTTGTCAATGCATAAAAGAGAAA 59.986 33.333 0.00 0.00 0.00 2.52
681 688 2.758979 CAGAAAGCAATGAATCCCAGCT 59.241 45.455 0.00 0.00 37.08 4.24
875 900 4.223032 ACCAACCACCACTAATCTCTACTG 59.777 45.833 0.00 0.00 0.00 2.74
918 997 1.258445 ACCCCTGCCTCGTCTTGTAG 61.258 60.000 0.00 0.00 0.00 2.74
919 998 1.258445 CCCCTGCCTCGTCTTGTAGT 61.258 60.000 0.00 0.00 0.00 2.73
920 999 0.608640 CCCTGCCTCGTCTTGTAGTT 59.391 55.000 0.00 0.00 0.00 2.24
921 1000 1.673033 CCCTGCCTCGTCTTGTAGTTG 60.673 57.143 0.00 0.00 0.00 3.16
922 1001 1.000955 CCTGCCTCGTCTTGTAGTTGT 59.999 52.381 0.00 0.00 0.00 3.32
923 1002 2.230508 CCTGCCTCGTCTTGTAGTTGTA 59.769 50.000 0.00 0.00 0.00 2.41
924 1003 3.119101 CCTGCCTCGTCTTGTAGTTGTAT 60.119 47.826 0.00 0.00 0.00 2.29
925 1004 4.106029 TGCCTCGTCTTGTAGTTGTATC 57.894 45.455 0.00 0.00 0.00 2.24
926 1005 3.119245 TGCCTCGTCTTGTAGTTGTATCC 60.119 47.826 0.00 0.00 0.00 2.59
927 1006 3.119245 GCCTCGTCTTGTAGTTGTATCCA 60.119 47.826 0.00 0.00 0.00 3.41
928 1007 4.421948 CCTCGTCTTGTAGTTGTATCCAC 58.578 47.826 0.00 0.00 0.00 4.02
929 1008 4.082408 CCTCGTCTTGTAGTTGTATCCACA 60.082 45.833 0.00 0.00 0.00 4.17
930 1009 5.055642 TCGTCTTGTAGTTGTATCCACAG 57.944 43.478 0.00 0.00 35.67 3.66
931 1010 4.521639 TCGTCTTGTAGTTGTATCCACAGT 59.478 41.667 0.00 0.00 35.67 3.55
938 1017 4.431416 AGTTGTATCCACAGTTCCACAA 57.569 40.909 0.00 0.00 35.67 3.33
965 1044 2.368548 TGGCTTTGCTAGACAAGACAGA 59.631 45.455 5.90 0.00 39.58 3.41
967 1046 3.556004 GGCTTTGCTAGACAAGACAGACT 60.556 47.826 0.00 0.00 40.06 3.24
969 1048 3.944055 TTGCTAGACAAGACAGACTCC 57.056 47.619 0.00 0.00 33.24 3.85
970 1049 2.876581 TGCTAGACAAGACAGACTCCA 58.123 47.619 0.00 0.00 0.00 3.86
971 1050 3.230976 TGCTAGACAAGACAGACTCCAA 58.769 45.455 0.00 0.00 0.00 3.53
972 1051 3.256879 TGCTAGACAAGACAGACTCCAAG 59.743 47.826 0.00 0.00 0.00 3.61
1059 1193 1.994507 CCTCCTCCTGCTCCTGCTT 60.995 63.158 0.00 0.00 40.48 3.91
1077 1211 2.503375 GTCGCCACAGGTACGTCG 60.503 66.667 0.00 0.00 0.00 5.12
1078 1212 2.669229 TCGCCACAGGTACGTCGA 60.669 61.111 0.00 0.00 0.00 4.20
1082 1224 1.443872 CCACAGGTACGTCGACAGC 60.444 63.158 17.16 6.67 0.00 4.40
1092 1234 1.548973 CGTCGACAGCGTGCTTCTTT 61.549 55.000 17.16 0.00 38.98 2.52
1096 1238 1.397693 CGACAGCGTGCTTCTTTCTTG 60.398 52.381 0.00 0.00 0.00 3.02
1099 1241 1.441016 GCGTGCTTCTTTCTTGCCG 60.441 57.895 0.00 0.00 0.00 5.69
1115 1257 1.442526 GCCGGTGAGAAGATGCATGG 61.443 60.000 2.46 0.00 0.00 3.66
1146 1288 5.351465 GGTGACCGATGCATAATTACTATGG 59.649 44.000 0.00 0.00 38.31 2.74
1152 1294 6.809689 CCGATGCATAATTACTATGGTTCGTA 59.190 38.462 0.00 0.00 38.31 3.43
1179 1321 1.690219 ATGCAGAGATGGGGACGACC 61.690 60.000 0.00 0.00 39.11 4.79
1351 1493 0.673644 GCGGACCTGCTAAGCAAGAA 60.674 55.000 0.00 0.00 38.41 2.52
1352 1494 1.363744 CGGACCTGCTAAGCAAGAAG 58.636 55.000 0.00 0.00 38.41 2.85
1353 1495 1.338200 CGGACCTGCTAAGCAAGAAGT 60.338 52.381 0.00 0.00 38.41 3.01
1354 1496 2.351455 GGACCTGCTAAGCAAGAAGTC 58.649 52.381 0.00 0.00 38.41 3.01
1361 1521 3.118629 TGCTAAGCAAGAAGTCATCCGAT 60.119 43.478 0.00 0.00 34.76 4.18
1396 1556 4.541482 GCATCCATGCGTGTGCCG 62.541 66.667 9.75 0.00 44.67 5.69
1397 1557 3.879682 CATCCATGCGTGTGCCGG 61.880 66.667 4.96 0.00 41.78 6.13
1411 1571 0.975556 TGCCGGCCAGTTAGATCTGA 60.976 55.000 26.77 0.00 37.61 3.27
1420 1580 3.005261 CCAGTTAGATCTGATCGTCCCTG 59.995 52.174 11.73 14.39 37.61 4.45
1426 1586 2.028420 TCTGATCGTCCCTGCATTTG 57.972 50.000 0.00 0.00 0.00 2.32
1448 1608 2.693797 TCACGTCCGTCAGTAGTTTC 57.306 50.000 0.00 0.00 0.00 2.78
1459 1619 4.266976 CGTCAGTAGTTTCTTCGTGTGTTT 59.733 41.667 0.00 0.00 0.00 2.83
1471 1631 7.231705 TCTTCGTGTGTTTCGTTTACAATAA 57.768 32.000 0.00 0.00 0.00 1.40
1477 1637 7.149256 CGTGTGTTTCGTTTACAATAATGGTTC 60.149 37.037 0.00 0.00 0.00 3.62
1509 1669 3.340727 CGGAGGTACGCACTTTAGG 57.659 57.895 0.00 0.00 0.00 2.69
1510 1670 0.529378 CGGAGGTACGCACTTTAGGT 59.471 55.000 0.00 0.00 0.00 3.08
1528 1688 3.557824 GACAATCGGTCGGCGTTT 58.442 55.556 6.85 0.00 36.65 3.60
1529 1689 1.418755 GACAATCGGTCGGCGTTTC 59.581 57.895 6.85 0.00 36.65 2.78
1530 1690 2.274834 GACAATCGGTCGGCGTTTCG 62.275 60.000 6.85 9.76 36.65 3.46
1531 1691 2.812178 AATCGGTCGGCGTTTCGG 60.812 61.111 6.85 3.94 0.00 4.30
1532 1692 3.578515 AATCGGTCGGCGTTTCGGT 62.579 57.895 6.85 2.83 0.00 4.69
1535 1695 4.974989 GGTCGGCGTTTCGGTGGT 62.975 66.667 6.85 0.00 0.00 4.16
1536 1696 3.708734 GTCGGCGTTTCGGTGGTG 61.709 66.667 6.85 0.00 0.00 4.17
1537 1697 4.224274 TCGGCGTTTCGGTGGTGT 62.224 61.111 6.85 0.00 0.00 4.16
1538 1698 2.356075 CGGCGTTTCGGTGGTGTA 60.356 61.111 0.00 0.00 0.00 2.90
1539 1699 2.377310 CGGCGTTTCGGTGGTGTAG 61.377 63.158 0.00 0.00 0.00 2.74
1540 1700 1.301165 GGCGTTTCGGTGGTGTAGT 60.301 57.895 0.00 0.00 0.00 2.73
1541 1701 0.881600 GGCGTTTCGGTGGTGTAGTT 60.882 55.000 0.00 0.00 0.00 2.24
1542 1702 1.605202 GGCGTTTCGGTGGTGTAGTTA 60.605 52.381 0.00 0.00 0.00 2.24
1543 1703 1.723003 GCGTTTCGGTGGTGTAGTTAG 59.277 52.381 0.00 0.00 0.00 2.34
1544 1704 2.863704 GCGTTTCGGTGGTGTAGTTAGT 60.864 50.000 0.00 0.00 0.00 2.24
1545 1705 3.383761 CGTTTCGGTGGTGTAGTTAGTT 58.616 45.455 0.00 0.00 0.00 2.24
1546 1706 3.426525 CGTTTCGGTGGTGTAGTTAGTTC 59.573 47.826 0.00 0.00 0.00 3.01
1547 1707 2.995466 TCGGTGGTGTAGTTAGTTCG 57.005 50.000 0.00 0.00 0.00 3.95
1548 1708 1.068333 TCGGTGGTGTAGTTAGTTCGC 60.068 52.381 0.00 0.00 0.00 4.70
1549 1709 1.718396 GGTGGTGTAGTTAGTTCGCC 58.282 55.000 0.00 0.00 0.00 5.54
1550 1710 1.343506 GTGGTGTAGTTAGTTCGCCG 58.656 55.000 0.00 0.00 34.86 6.46
1551 1711 0.244450 TGGTGTAGTTAGTTCGCCGG 59.756 55.000 0.00 0.00 34.86 6.13
1552 1712 1.080435 GGTGTAGTTAGTTCGCCGGC 61.080 60.000 19.07 19.07 0.00 6.13
1553 1713 1.080435 GTGTAGTTAGTTCGCCGGCC 61.080 60.000 23.46 7.02 0.00 6.13
1554 1714 1.875364 GTAGTTAGTTCGCCGGCCG 60.875 63.158 23.46 21.04 38.61 6.13
1555 1715 3.704908 TAGTTAGTTCGCCGGCCGC 62.705 63.158 22.85 14.90 36.73 6.53
1574 1734 3.878086 GCCGTGTGGTGATGTAATATG 57.122 47.619 0.00 0.00 37.67 1.78
1575 1735 2.548057 GCCGTGTGGTGATGTAATATGG 59.452 50.000 0.00 0.00 37.67 2.74
1576 1736 3.804036 CCGTGTGGTGATGTAATATGGT 58.196 45.455 0.00 0.00 0.00 3.55
1577 1737 3.807622 CCGTGTGGTGATGTAATATGGTC 59.192 47.826 0.00 0.00 0.00 4.02
1578 1738 4.438148 CGTGTGGTGATGTAATATGGTCA 58.562 43.478 0.00 0.00 0.00 4.02
1579 1739 5.056480 CGTGTGGTGATGTAATATGGTCAT 58.944 41.667 0.00 0.00 0.00 3.06
1580 1740 5.050159 CGTGTGGTGATGTAATATGGTCATG 60.050 44.000 0.00 0.00 0.00 3.07
1581 1741 5.239306 GTGTGGTGATGTAATATGGTCATGG 59.761 44.000 0.00 0.00 0.00 3.66
1582 1742 4.761739 GTGGTGATGTAATATGGTCATGGG 59.238 45.833 0.00 0.00 0.00 4.00
1583 1743 4.662650 TGGTGATGTAATATGGTCATGGGA 59.337 41.667 0.00 0.00 0.00 4.37
1584 1744 5.312974 TGGTGATGTAATATGGTCATGGGAT 59.687 40.000 0.00 0.00 0.00 3.85
1585 1745 5.882557 GGTGATGTAATATGGTCATGGGATC 59.117 44.000 0.00 0.00 0.00 3.36
1586 1746 5.882557 GTGATGTAATATGGTCATGGGATCC 59.117 44.000 1.92 1.92 0.00 3.36
1587 1747 4.927267 TGTAATATGGTCATGGGATCCC 57.073 45.455 25.22 25.22 0.00 3.85
1588 1748 4.512298 TGTAATATGGTCATGGGATCCCT 58.488 43.478 31.05 14.27 36.94 4.20
1589 1749 5.670899 TGTAATATGGTCATGGGATCCCTA 58.329 41.667 31.05 17.88 36.94 3.53
1590 1750 6.279405 TGTAATATGGTCATGGGATCCCTAT 58.721 40.000 31.05 19.29 36.94 2.57
1591 1751 5.722172 AATATGGTCATGGGATCCCTATG 57.278 43.478 31.05 27.84 36.94 2.23
1592 1752 1.746157 TGGTCATGGGATCCCTATGG 58.254 55.000 31.05 17.10 36.94 2.74
1593 1753 1.060640 TGGTCATGGGATCCCTATGGT 60.061 52.381 31.05 9.59 36.94 3.55
1594 1754 1.630878 GGTCATGGGATCCCTATGGTC 59.369 57.143 31.05 22.95 36.94 4.02
1595 1755 2.338809 GTCATGGGATCCCTATGGTCA 58.661 52.381 31.05 9.90 36.94 4.02
1596 1756 2.915604 GTCATGGGATCCCTATGGTCAT 59.084 50.000 31.05 11.94 36.94 3.06
1597 1757 3.331889 GTCATGGGATCCCTATGGTCATT 59.668 47.826 31.05 2.56 36.94 2.57
1598 1758 3.331591 TCATGGGATCCCTATGGTCATTG 59.668 47.826 31.05 13.67 36.94 2.82
1599 1759 1.425066 TGGGATCCCTATGGTCATTGC 59.575 52.381 31.05 0.39 36.94 3.56
1600 1760 1.611673 GGGATCCCTATGGTCATTGCG 60.612 57.143 24.69 0.00 0.00 4.85
1601 1761 1.072331 GGATCCCTATGGTCATTGCGT 59.928 52.381 0.00 0.00 0.00 5.24
1602 1762 2.487265 GGATCCCTATGGTCATTGCGTT 60.487 50.000 0.00 0.00 0.00 4.84
1603 1763 2.036958 TCCCTATGGTCATTGCGTTG 57.963 50.000 0.00 0.00 0.00 4.10
1604 1764 1.280710 TCCCTATGGTCATTGCGTTGT 59.719 47.619 0.00 0.00 0.00 3.32
1605 1765 2.091541 CCCTATGGTCATTGCGTTGTT 58.908 47.619 0.00 0.00 0.00 2.83
1606 1766 2.491693 CCCTATGGTCATTGCGTTGTTT 59.508 45.455 0.00 0.00 0.00 2.83
1607 1767 3.427503 CCCTATGGTCATTGCGTTGTTTC 60.428 47.826 0.00 0.00 0.00 2.78
1608 1768 3.190327 CCTATGGTCATTGCGTTGTTTCA 59.810 43.478 0.00 0.00 0.00 2.69
1609 1769 2.772568 TGGTCATTGCGTTGTTTCAG 57.227 45.000 0.00 0.00 0.00 3.02
1610 1770 1.268999 TGGTCATTGCGTTGTTTCAGC 60.269 47.619 0.00 0.00 0.00 4.26
1611 1771 1.408422 GTCATTGCGTTGTTTCAGCC 58.592 50.000 0.00 0.00 0.00 4.85
1612 1772 1.001378 GTCATTGCGTTGTTTCAGCCT 60.001 47.619 0.00 0.00 0.00 4.58
1613 1773 1.680735 TCATTGCGTTGTTTCAGCCTT 59.319 42.857 0.00 0.00 0.00 4.35
1614 1774 2.100584 TCATTGCGTTGTTTCAGCCTTT 59.899 40.909 0.00 0.00 0.00 3.11
1615 1775 2.202295 TTGCGTTGTTTCAGCCTTTC 57.798 45.000 0.00 0.00 0.00 2.62
1616 1776 1.098869 TGCGTTGTTTCAGCCTTTCA 58.901 45.000 0.00 0.00 0.00 2.69
1617 1777 1.065401 TGCGTTGTTTCAGCCTTTCAG 59.935 47.619 0.00 0.00 0.00 3.02
1618 1778 1.758783 CGTTGTTTCAGCCTTTCAGC 58.241 50.000 0.00 0.00 0.00 4.26
1619 1779 1.065401 CGTTGTTTCAGCCTTTCAGCA 59.935 47.619 0.00 0.00 34.23 4.41
1620 1780 2.287788 CGTTGTTTCAGCCTTTCAGCAT 60.288 45.455 0.00 0.00 34.23 3.79
1621 1781 3.054878 GTTGTTTCAGCCTTTCAGCATG 58.945 45.455 0.00 0.00 34.23 4.06
1622 1782 1.614903 TGTTTCAGCCTTTCAGCATGG 59.385 47.619 0.00 0.00 36.16 3.66
1623 1783 1.888512 GTTTCAGCCTTTCAGCATGGA 59.111 47.619 0.00 0.00 36.16 3.41
1624 1784 1.538047 TTCAGCCTTTCAGCATGGAC 58.462 50.000 0.00 0.00 36.16 4.02
1625 1785 0.674581 TCAGCCTTTCAGCATGGACG 60.675 55.000 0.00 0.00 36.16 4.79
1626 1786 1.377725 AGCCTTTCAGCATGGACGG 60.378 57.895 0.00 0.00 36.16 4.79
1627 1787 1.377202 GCCTTTCAGCATGGACGGA 60.377 57.895 0.00 0.00 36.16 4.69
1628 1788 1.648467 GCCTTTCAGCATGGACGGAC 61.648 60.000 0.00 0.00 36.16 4.79
1629 1789 0.321564 CCTTTCAGCATGGACGGACA 60.322 55.000 0.00 0.00 36.16 4.02
1630 1790 0.798776 CTTTCAGCATGGACGGACAC 59.201 55.000 0.00 0.00 36.16 3.67
1631 1791 0.605319 TTTCAGCATGGACGGACACC 60.605 55.000 0.00 0.00 36.16 4.16
1632 1792 2.436646 CAGCATGGACGGACACCC 60.437 66.667 0.00 0.00 0.00 4.61
1633 1793 2.927856 AGCATGGACGGACACCCA 60.928 61.111 0.00 0.00 36.79 4.51
1634 1794 2.272146 GCATGGACGGACACCCAT 59.728 61.111 0.00 0.00 43.51 4.00
1635 1795 0.980754 AGCATGGACGGACACCCATA 60.981 55.000 0.00 0.00 40.95 2.74
1636 1796 0.108585 GCATGGACGGACACCCATAT 59.891 55.000 0.00 0.00 40.95 1.78
1637 1797 1.882912 CATGGACGGACACCCATATG 58.117 55.000 0.00 0.00 40.95 1.78
1638 1798 0.108585 ATGGACGGACACCCATATGC 59.891 55.000 0.00 0.00 41.09 3.14
1639 1799 1.268283 TGGACGGACACCCATATGCA 61.268 55.000 0.00 0.00 0.00 3.96
1640 1800 0.107410 GGACGGACACCCATATGCAA 60.107 55.000 0.00 0.00 0.00 4.08
1641 1801 1.476833 GGACGGACACCCATATGCAAT 60.477 52.381 0.00 0.00 0.00 3.56
1642 1802 1.603802 GACGGACACCCATATGCAATG 59.396 52.381 0.00 0.00 0.00 2.82
1643 1803 1.211703 ACGGACACCCATATGCAATGA 59.788 47.619 9.56 0.00 0.00 2.57
1644 1804 2.296792 CGGACACCCATATGCAATGAA 58.703 47.619 9.56 0.00 0.00 2.57
1645 1805 2.886523 CGGACACCCATATGCAATGAAT 59.113 45.455 9.56 0.00 0.00 2.57
1646 1806 3.058016 CGGACACCCATATGCAATGAATC 60.058 47.826 9.56 3.42 0.00 2.52
1647 1807 3.256631 GGACACCCATATGCAATGAATCC 59.743 47.826 9.56 7.29 0.00 3.01
1648 1808 2.886523 ACACCCATATGCAATGAATCCG 59.113 45.455 9.56 0.00 0.00 4.18
1649 1809 2.886523 CACCCATATGCAATGAATCCGT 59.113 45.455 9.56 0.00 0.00 4.69
1650 1810 3.318839 CACCCATATGCAATGAATCCGTT 59.681 43.478 9.56 0.00 0.00 4.44
1651 1811 3.569701 ACCCATATGCAATGAATCCGTTC 59.430 43.478 9.56 0.00 34.85 3.95
1652 1812 3.365264 CCCATATGCAATGAATCCGTTCG 60.365 47.826 9.56 0.00 37.15 3.95
1653 1813 3.250762 CCATATGCAATGAATCCGTTCGT 59.749 43.478 9.56 0.00 37.15 3.85
1654 1814 2.830772 ATGCAATGAATCCGTTCGTG 57.169 45.000 0.00 0.00 37.15 4.35
1655 1815 0.801872 TGCAATGAATCCGTTCGTGG 59.198 50.000 0.00 0.00 37.15 4.94
1656 1816 0.523335 GCAATGAATCCGTTCGTGGC 60.523 55.000 0.00 0.00 41.68 5.01
1657 1817 1.086696 CAATGAATCCGTTCGTGGCT 58.913 50.000 0.00 0.00 37.15 4.75
1658 1818 1.468520 CAATGAATCCGTTCGTGGCTT 59.531 47.619 0.00 0.00 37.15 4.35
1659 1819 1.821216 ATGAATCCGTTCGTGGCTTT 58.179 45.000 0.00 0.00 37.15 3.51
1660 1820 2.459060 TGAATCCGTTCGTGGCTTTA 57.541 45.000 0.00 0.00 37.15 1.85
1661 1821 2.768698 TGAATCCGTTCGTGGCTTTAA 58.231 42.857 0.00 0.00 37.15 1.52
1662 1822 3.340034 TGAATCCGTTCGTGGCTTTAAT 58.660 40.909 0.00 0.00 37.15 1.40
1663 1823 3.754323 TGAATCCGTTCGTGGCTTTAATT 59.246 39.130 0.00 0.00 37.15 1.40
1664 1824 4.216687 TGAATCCGTTCGTGGCTTTAATTT 59.783 37.500 0.00 0.00 37.15 1.82
1665 1825 3.546002 TCCGTTCGTGGCTTTAATTTG 57.454 42.857 0.00 0.00 0.00 2.32
1666 1826 3.139850 TCCGTTCGTGGCTTTAATTTGA 58.860 40.909 0.00 0.00 0.00 2.69
1667 1827 3.564644 TCCGTTCGTGGCTTTAATTTGAA 59.435 39.130 0.00 0.00 0.00 2.69
1668 1828 4.216687 TCCGTTCGTGGCTTTAATTTGAAT 59.783 37.500 0.00 0.00 0.00 2.57
1669 1829 5.411977 TCCGTTCGTGGCTTTAATTTGAATA 59.588 36.000 0.00 0.00 0.00 1.75
1670 1830 6.072618 TCCGTTCGTGGCTTTAATTTGAATAA 60.073 34.615 0.00 0.00 0.00 1.40
1671 1831 6.750039 CCGTTCGTGGCTTTAATTTGAATAAT 59.250 34.615 0.00 0.00 0.00 1.28
1672 1832 7.911205 CCGTTCGTGGCTTTAATTTGAATAATA 59.089 33.333 0.00 0.00 0.00 0.98
1673 1833 9.445786 CGTTCGTGGCTTTAATTTGAATAATAT 57.554 29.630 0.00 0.00 0.00 1.28
1698 1858 9.840427 ATTTGTGAATTTCCAAAAGTATAGACG 57.160 29.630 13.43 0.00 34.52 4.18
1699 1859 8.610248 TTGTGAATTTCCAAAAGTATAGACGA 57.390 30.769 0.00 0.00 0.00 4.20
1700 1860 8.610248 TGTGAATTTCCAAAAGTATAGACGAA 57.390 30.769 0.00 0.00 0.00 3.85
1701 1861 9.226606 TGTGAATTTCCAAAAGTATAGACGAAT 57.773 29.630 0.00 0.00 0.00 3.34
1751 1911 9.906660 AAAAATGCTCACAAGTTTAATAATCGA 57.093 25.926 0.00 0.00 0.00 3.59
1752 1912 9.906660 AAAATGCTCACAAGTTTAATAATCGAA 57.093 25.926 0.00 0.00 0.00 3.71
1753 1913 9.906660 AAATGCTCACAAGTTTAATAATCGAAA 57.093 25.926 0.00 0.00 0.00 3.46
1754 1914 9.559958 AATGCTCACAAGTTTAATAATCGAAAG 57.440 29.630 0.00 0.00 0.00 2.62
1755 1915 7.526608 TGCTCACAAGTTTAATAATCGAAAGG 58.473 34.615 0.00 0.00 0.00 3.11
1756 1916 7.389330 TGCTCACAAGTTTAATAATCGAAAGGA 59.611 33.333 0.00 0.00 0.00 3.36
1757 1917 8.234546 GCTCACAAGTTTAATAATCGAAAGGAA 58.765 33.333 0.00 0.00 0.00 3.36
1758 1918 9.760660 CTCACAAGTTTAATAATCGAAAGGAAG 57.239 33.333 0.00 0.00 0.00 3.46
1759 1919 9.496873 TCACAAGTTTAATAATCGAAAGGAAGA 57.503 29.630 0.00 0.00 0.00 2.87
1769 1929 9.639601 AATAATCGAAAGGAAGAAATGAAAACC 57.360 29.630 0.00 0.00 0.00 3.27
1770 1930 5.103290 TCGAAAGGAAGAAATGAAAACCG 57.897 39.130 0.00 0.00 0.00 4.44
1771 1931 4.817464 TCGAAAGGAAGAAATGAAAACCGA 59.183 37.500 0.00 0.00 0.00 4.69
1772 1932 4.909880 CGAAAGGAAGAAATGAAAACCGAC 59.090 41.667 0.00 0.00 0.00 4.79
1773 1933 5.504994 CGAAAGGAAGAAATGAAAACCGACA 60.505 40.000 0.00 0.00 0.00 4.35
1774 1934 5.845391 AAGGAAGAAATGAAAACCGACAA 57.155 34.783 0.00 0.00 0.00 3.18
1775 1935 5.845391 AGGAAGAAATGAAAACCGACAAA 57.155 34.783 0.00 0.00 0.00 2.83
1776 1936 6.215495 AGGAAGAAATGAAAACCGACAAAA 57.785 33.333 0.00 0.00 0.00 2.44
1777 1937 6.040247 AGGAAGAAATGAAAACCGACAAAAC 58.960 36.000 0.00 0.00 0.00 2.43
1778 1938 5.051973 GGAAGAAATGAAAACCGACAAAACG 60.052 40.000 0.00 0.00 0.00 3.60
1779 1939 5.238006 AGAAATGAAAACCGACAAAACGA 57.762 34.783 0.00 0.00 35.09 3.85
1780 1940 5.642686 AGAAATGAAAACCGACAAAACGAA 58.357 33.333 0.00 0.00 35.09 3.85
1781 1941 6.094061 AGAAATGAAAACCGACAAAACGAAA 58.906 32.000 0.00 0.00 35.09 3.46
1782 1942 5.689927 AATGAAAACCGACAAAACGAAAC 57.310 34.783 0.00 0.00 35.09 2.78
1783 1943 4.156664 TGAAAACCGACAAAACGAAACA 57.843 36.364 0.00 0.00 35.09 2.83
1784 1944 4.734917 TGAAAACCGACAAAACGAAACAT 58.265 34.783 0.00 0.00 35.09 2.71
1785 1945 5.877031 TGAAAACCGACAAAACGAAACATA 58.123 33.333 0.00 0.00 35.09 2.29
1786 1946 5.966503 TGAAAACCGACAAAACGAAACATAG 59.033 36.000 0.00 0.00 35.09 2.23
1787 1947 5.738118 AAACCGACAAAACGAAACATAGA 57.262 34.783 0.00 0.00 35.09 1.98
1788 1948 4.720530 ACCGACAAAACGAAACATAGAC 57.279 40.909 0.00 0.00 35.09 2.59
1789 1949 4.374399 ACCGACAAAACGAAACATAGACT 58.626 39.130 0.00 0.00 35.09 3.24
1790 1950 5.531634 ACCGACAAAACGAAACATAGACTA 58.468 37.500 0.00 0.00 35.09 2.59
1791 1951 5.984926 ACCGACAAAACGAAACATAGACTAA 59.015 36.000 0.00 0.00 35.09 2.24
1792 1952 6.145048 ACCGACAAAACGAAACATAGACTAAG 59.855 38.462 0.00 0.00 35.09 2.18
1793 1953 6.007677 CGACAAAACGAAACATAGACTAAGC 58.992 40.000 0.00 0.00 35.09 3.09
1794 1954 5.912528 ACAAAACGAAACATAGACTAAGCG 58.087 37.500 0.00 0.00 0.00 4.68
1795 1955 5.107220 ACAAAACGAAACATAGACTAAGCGG 60.107 40.000 0.00 0.00 0.00 5.52
1796 1956 2.537401 ACGAAACATAGACTAAGCGGC 58.463 47.619 0.00 0.00 0.00 6.53
1797 1957 1.859080 CGAAACATAGACTAAGCGGCC 59.141 52.381 0.00 0.00 0.00 6.13
1798 1958 2.481449 CGAAACATAGACTAAGCGGCCT 60.481 50.000 0.00 0.00 0.00 5.19
1799 1959 2.892784 AACATAGACTAAGCGGCCTC 57.107 50.000 0.00 0.00 0.00 4.70
1800 1960 1.776662 ACATAGACTAAGCGGCCTCA 58.223 50.000 0.00 0.00 0.00 3.86
1801 1961 2.108168 ACATAGACTAAGCGGCCTCAA 58.892 47.619 0.00 0.00 0.00 3.02
1802 1962 2.700897 ACATAGACTAAGCGGCCTCAAT 59.299 45.455 0.00 0.00 0.00 2.57
1803 1963 3.895656 ACATAGACTAAGCGGCCTCAATA 59.104 43.478 0.00 0.00 0.00 1.90
1804 1964 4.528596 ACATAGACTAAGCGGCCTCAATAT 59.471 41.667 0.00 0.00 0.00 1.28
1805 1965 3.393089 AGACTAAGCGGCCTCAATATG 57.607 47.619 0.00 0.00 0.00 1.78
1806 1966 2.037772 AGACTAAGCGGCCTCAATATGG 59.962 50.000 0.00 0.00 0.00 2.74
1807 1967 1.768870 ACTAAGCGGCCTCAATATGGT 59.231 47.619 0.00 0.00 0.00 3.55
1808 1968 2.224305 ACTAAGCGGCCTCAATATGGTC 60.224 50.000 0.00 0.00 0.00 4.02
1809 1969 0.546122 AAGCGGCCTCAATATGGTCA 59.454 50.000 0.00 0.00 0.00 4.02
1810 1970 0.767375 AGCGGCCTCAATATGGTCAT 59.233 50.000 0.00 0.00 0.00 3.06
1811 1971 1.143684 AGCGGCCTCAATATGGTCATT 59.856 47.619 0.00 0.00 0.00 2.57
1812 1972 1.267806 GCGGCCTCAATATGGTCATTG 59.732 52.381 0.00 0.00 37.27 2.82
1813 1973 1.267806 CGGCCTCAATATGGTCATTGC 59.732 52.381 0.00 0.00 36.13 3.56
1814 1974 1.267806 GGCCTCAATATGGTCATTGCG 59.732 52.381 0.00 0.00 36.13 4.85
1854 2014 4.181309 GGCTACATGGCTAGTCTATGAC 57.819 50.000 14.30 0.00 37.15 3.06
1867 2027 8.526978 GGCTAGTCTATGACAATGATGAAGATA 58.473 37.037 0.46 0.00 34.60 1.98
1900 2060 8.311109 GGCCAATTTTATAAAAGAGTGGAAAGA 58.689 33.333 26.81 2.54 33.48 2.52
1901 2061 9.140286 GCCAATTTTATAAAAGAGTGGAAAGAC 57.860 33.333 26.81 14.08 33.48 3.01
1965 2125 7.766278 ACTCCAATACTTGTTCAGCAGTATAAG 59.234 37.037 0.00 0.00 0.00 1.73
1994 2155 5.904080 GTCAAACATTAGTATTGAGCATCGC 59.096 40.000 0.00 0.00 38.61 4.58
1995 2156 5.584251 TCAAACATTAGTATTGAGCATCGCA 59.416 36.000 0.00 0.00 38.61 5.10
1997 2158 6.624352 AACATTAGTATTGAGCATCGCAAT 57.376 33.333 0.00 0.00 38.61 3.56
2057 2218 9.400638 GTATCTTCTATGTATCAGCAGTACAAC 57.599 37.037 0.00 0.00 35.84 3.32
2058 2219 7.404671 TCTTCTATGTATCAGCAGTACAACA 57.595 36.000 0.00 0.00 35.84 3.33
2062 2223 7.203218 TCTATGTATCAGCAGTACAACACATC 58.797 38.462 0.00 0.00 35.84 3.06
2064 2225 5.546526 TGTATCAGCAGTACAACACATCAA 58.453 37.500 0.00 0.00 0.00 2.57
2067 2228 7.821846 TGTATCAGCAGTACAACACATCAATTA 59.178 33.333 0.00 0.00 0.00 1.40
2119 3553 5.757099 AACCATAGGTGTGTATATAGCCC 57.243 43.478 0.00 0.00 35.34 5.19
2123 3557 5.104900 CCATAGGTGTGTATATAGCCCTTCC 60.105 48.000 0.00 0.00 0.00 3.46
2125 3559 4.161102 AGGTGTGTATATAGCCCTTCCTC 58.839 47.826 0.00 0.00 0.00 3.71
2126 3560 3.056749 GGTGTGTATATAGCCCTTCCTCG 60.057 52.174 0.00 0.00 0.00 4.63
2127 3561 3.573110 GTGTGTATATAGCCCTTCCTCGT 59.427 47.826 0.00 0.00 0.00 4.18
2128 3562 3.572682 TGTGTATATAGCCCTTCCTCGTG 59.427 47.826 0.00 0.00 0.00 4.35
2129 3563 3.573110 GTGTATATAGCCCTTCCTCGTGT 59.427 47.826 0.00 0.00 0.00 4.49
2130 3564 4.763793 GTGTATATAGCCCTTCCTCGTGTA 59.236 45.833 0.00 0.00 0.00 2.90
2131 3565 5.418209 GTGTATATAGCCCTTCCTCGTGTAT 59.582 44.000 0.00 0.00 0.00 2.29
2132 3566 6.600822 GTGTATATAGCCCTTCCTCGTGTATA 59.399 42.308 0.00 0.00 0.00 1.47
2133 3567 7.284944 GTGTATATAGCCCTTCCTCGTGTATAT 59.715 40.741 0.00 0.00 0.00 0.86
2134 3568 8.496916 TGTATATAGCCCTTCCTCGTGTATATA 58.503 37.037 0.00 0.00 0.00 0.86
2135 3569 9.001542 GTATATAGCCCTTCCTCGTGTATATAG 57.998 40.741 0.00 0.00 0.00 1.31
2136 3570 2.826725 AGCCCTTCCTCGTGTATATAGC 59.173 50.000 0.00 0.00 0.00 2.97
2137 3571 2.094130 GCCCTTCCTCGTGTATATAGCC 60.094 54.545 0.00 0.00 0.00 3.93
2138 3572 2.496470 CCCTTCCTCGTGTATATAGCCC 59.504 54.545 0.00 0.00 0.00 5.19
2139 3573 3.432378 CCTTCCTCGTGTATATAGCCCT 58.568 50.000 0.00 0.00 0.00 5.19
2140 3574 3.833070 CCTTCCTCGTGTATATAGCCCTT 59.167 47.826 0.00 0.00 0.00 3.95
2141 3575 4.082136 CCTTCCTCGTGTATATAGCCCTTC 60.082 50.000 0.00 0.00 0.00 3.46
2142 3576 3.428532 TCCTCGTGTATATAGCCCTTCC 58.571 50.000 0.00 0.00 0.00 3.46
2143 3577 3.075582 TCCTCGTGTATATAGCCCTTCCT 59.924 47.826 0.00 0.00 0.00 3.36
2144 3578 3.444388 CCTCGTGTATATAGCCCTTCCTC 59.556 52.174 0.00 0.00 0.00 3.71
2156 3590 4.302067 AGCCCTTCCTCTTAATCAGATGA 58.698 43.478 0.00 0.00 0.00 2.92
2200 3634 5.340667 GCACTTTTCTTTTGTTCTAGCGATG 59.659 40.000 0.00 0.00 0.00 3.84
2212 3646 7.015226 TGTTCTAGCGATGAATTAACCAATG 57.985 36.000 0.00 0.00 0.00 2.82
2247 3681 7.362662 TGTATGTGAAGATCAAGCAAGTTTTC 58.637 34.615 0.00 0.00 0.00 2.29
2249 3683 7.750229 ATGTGAAGATCAAGCAAGTTTTCTA 57.250 32.000 0.00 0.00 0.00 2.10
2251 3685 8.169977 TGTGAAGATCAAGCAAGTTTTCTATT 57.830 30.769 0.00 0.00 0.00 1.73
2252 3686 8.292448 TGTGAAGATCAAGCAAGTTTTCTATTC 58.708 33.333 0.00 0.00 0.00 1.75
2255 3689 7.750229 AGATCAAGCAAGTTTTCTATTCACA 57.250 32.000 0.00 0.00 0.00 3.58
2279 3713 7.982354 ACAGGTTAGTGCAAAATAGATCTCTAC 59.018 37.037 0.00 0.00 0.00 2.59
2280 3714 8.200792 CAGGTTAGTGCAAAATAGATCTCTACT 58.799 37.037 0.00 0.00 0.00 2.57
2281 3715 8.763601 AGGTTAGTGCAAAATAGATCTCTACTT 58.236 33.333 0.00 0.00 0.00 2.24
2285 3719 7.731054 AGTGCAAAATAGATCTCTACTTAGGG 58.269 38.462 0.00 0.00 0.00 3.53
2286 3720 7.565398 AGTGCAAAATAGATCTCTACTTAGGGA 59.435 37.037 0.00 0.00 37.19 4.20
2287 3721 7.654116 GTGCAAAATAGATCTCTACTTAGGGAC 59.346 40.741 0.00 0.00 35.24 4.46
2288 3722 7.344612 TGCAAAATAGATCTCTACTTAGGGACA 59.655 37.037 0.00 0.00 35.24 4.02
2289 3723 8.371699 GCAAAATAGATCTCTACTTAGGGACAT 58.628 37.037 0.00 0.00 35.24 3.06
2290 3724 9.703892 CAAAATAGATCTCTACTTAGGGACATG 57.296 37.037 0.00 0.00 35.24 3.21
2291 3725 8.429237 AAATAGATCTCTACTTAGGGACATGG 57.571 38.462 0.00 0.00 35.24 3.66
2292 3726 5.671463 AGATCTCTACTTAGGGACATGGA 57.329 43.478 0.00 0.00 35.24 3.41
2293 3727 5.640147 AGATCTCTACTTAGGGACATGGAG 58.360 45.833 0.00 0.00 35.24 3.86
2294 3728 4.883021 TCTCTACTTAGGGACATGGAGT 57.117 45.455 0.00 0.00 0.00 3.85
2295 3729 5.988865 TCTCTACTTAGGGACATGGAGTA 57.011 43.478 0.00 0.00 0.00 2.59
2296 3730 6.532119 TCTCTACTTAGGGACATGGAGTAT 57.468 41.667 0.00 0.00 0.00 2.12
2297 3731 6.923670 TCTCTACTTAGGGACATGGAGTATT 58.076 40.000 0.00 0.00 0.00 1.89
2298 3732 7.363031 TCTCTACTTAGGGACATGGAGTATTT 58.637 38.462 0.00 0.00 0.00 1.40
2299 3733 7.287927 TCTCTACTTAGGGACATGGAGTATTTG 59.712 40.741 0.00 0.00 0.00 2.32
2300 3734 7.130099 TCTACTTAGGGACATGGAGTATTTGA 58.870 38.462 0.00 0.00 0.00 2.69
2301 3735 6.831664 ACTTAGGGACATGGAGTATTTGAT 57.168 37.500 0.00 0.00 0.00 2.57
2302 3736 6.831976 ACTTAGGGACATGGAGTATTTGATC 58.168 40.000 0.00 0.00 0.00 2.92
2303 3737 4.713792 AGGGACATGGAGTATTTGATCC 57.286 45.455 0.00 0.00 36.05 3.36
2304 3738 3.395941 AGGGACATGGAGTATTTGATCCC 59.604 47.826 0.00 0.00 44.25 3.85
2305 3739 3.403038 GGACATGGAGTATTTGATCCCG 58.597 50.000 0.00 0.00 34.47 5.14
2306 3740 3.071023 GGACATGGAGTATTTGATCCCGA 59.929 47.826 0.00 0.00 34.47 5.14
2307 3741 4.310769 GACATGGAGTATTTGATCCCGAG 58.689 47.826 0.00 0.00 34.47 4.63
2308 3742 2.910688 TGGAGTATTTGATCCCGAGC 57.089 50.000 0.00 0.00 34.47 5.03
2309 3743 2.398588 TGGAGTATTTGATCCCGAGCT 58.601 47.619 0.00 0.00 34.47 4.09
2310 3744 2.365617 TGGAGTATTTGATCCCGAGCTC 59.634 50.000 2.73 2.73 34.47 4.09
2311 3745 2.365617 GGAGTATTTGATCCCGAGCTCA 59.634 50.000 15.40 0.00 0.00 4.26
2312 3746 3.007398 GGAGTATTTGATCCCGAGCTCAT 59.993 47.826 15.40 0.00 0.00 2.90
2313 3747 4.220821 GGAGTATTTGATCCCGAGCTCATA 59.779 45.833 15.40 0.00 0.00 2.15
2314 3748 5.105146 GGAGTATTTGATCCCGAGCTCATAT 60.105 44.000 15.40 3.21 0.00 1.78
2315 3749 5.728471 AGTATTTGATCCCGAGCTCATATG 58.272 41.667 15.40 0.00 0.00 1.78
2316 3750 2.462456 TTGATCCCGAGCTCATATGC 57.538 50.000 15.40 0.11 0.00 3.14
2331 3765 2.749682 TGCTCCCGCATGAACAGT 59.250 55.556 0.00 0.00 42.25 3.55
2332 3766 1.979262 TGCTCCCGCATGAACAGTA 59.021 52.632 0.00 0.00 42.25 2.74
2333 3767 0.323302 TGCTCCCGCATGAACAGTAA 59.677 50.000 0.00 0.00 42.25 2.24
2334 3768 1.271108 TGCTCCCGCATGAACAGTAAA 60.271 47.619 0.00 0.00 42.25 2.01
2335 3769 1.810151 GCTCCCGCATGAACAGTAAAA 59.190 47.619 0.00 0.00 35.78 1.52
2336 3770 2.423538 GCTCCCGCATGAACAGTAAAAT 59.576 45.455 0.00 0.00 35.78 1.82
2337 3771 3.487544 GCTCCCGCATGAACAGTAAAATC 60.488 47.826 0.00 0.00 35.78 2.17
2338 3772 2.675844 TCCCGCATGAACAGTAAAATCG 59.324 45.455 0.00 0.00 0.00 3.34
2339 3773 2.675844 CCCGCATGAACAGTAAAATCGA 59.324 45.455 0.00 0.00 0.00 3.59
2340 3774 3.126171 CCCGCATGAACAGTAAAATCGAA 59.874 43.478 0.00 0.00 0.00 3.71
2341 3775 4.378978 CCCGCATGAACAGTAAAATCGAAA 60.379 41.667 0.00 0.00 0.00 3.46
2342 3776 5.150683 CCGCATGAACAGTAAAATCGAAAA 58.849 37.500 0.00 0.00 0.00 2.29
2343 3777 5.627367 CCGCATGAACAGTAAAATCGAAAAA 59.373 36.000 0.00 0.00 0.00 1.94
2344 3778 6.307800 CCGCATGAACAGTAAAATCGAAAAAT 59.692 34.615 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.513204 CGTGCATGGAGCCAGGAG 60.513 66.667 5.21 0.00 44.83 3.69
4 5 2.513204 CTCGTGCATGGAGCCAGG 60.513 66.667 5.98 0.00 44.83 4.45
5 6 2.513204 CCTCGTGCATGGAGCCAG 60.513 66.667 5.98 0.00 44.83 4.85
16 17 1.360551 CTAGTCATCCGCCCTCGTG 59.639 63.158 0.00 0.00 0.00 4.35
28 29 2.543777 AGCGTTTTCTTGCCTAGTCA 57.456 45.000 0.00 0.00 0.00 3.41
86 87 4.144681 CTCTCAGCAACGCAGCGC 62.145 66.667 16.61 0.00 40.15 5.92
95 96 2.610479 CGTGACTAAAAGCCTCTCAGCA 60.610 50.000 0.00 0.00 34.23 4.41
107 108 3.754955 CGAGCAGTACATCGTGACTAAA 58.245 45.455 0.00 0.00 34.30 1.85
115 116 0.984829 CACACACGAGCAGTACATCG 59.015 55.000 11.99 11.99 44.36 3.84
138 139 0.531974 GAGCACGAACTCAACCCACA 60.532 55.000 0.00 0.00 36.65 4.17
139 140 0.531974 TGAGCACGAACTCAACCCAC 60.532 55.000 9.22 0.00 43.59 4.61
153 154 2.668212 CGGCGTTTCCCTTGAGCA 60.668 61.111 0.00 0.00 0.00 4.26
188 190 2.050442 GGTTTTTCCTGGCGCACG 60.050 61.111 10.83 0.00 0.00 5.34
193 195 1.471287 GATACGGTGGTTTTTCCTGGC 59.529 52.381 0.00 0.00 37.07 4.85
211 213 3.650461 GAGGGAAGAAGAAGGCATAGGAT 59.350 47.826 0.00 0.00 0.00 3.24
233 235 1.539157 GCTCAAACCAAGGAGGAAGG 58.461 55.000 0.00 0.00 41.22 3.46
248 250 1.891811 CACAGTTCTCTCTCTGGCTCA 59.108 52.381 0.00 0.00 36.17 4.26
264 266 1.005332 TCTCTCTGTCTCCCTCCACAG 59.995 57.143 0.00 0.00 41.32 3.66
269 271 2.508300 ACTACCTCTCTCTGTCTCCCTC 59.492 54.545 0.00 0.00 0.00 4.30
272 274 2.025699 ACCACTACCTCTCTCTGTCTCC 60.026 54.545 0.00 0.00 0.00 3.71
289 291 2.034048 GCTGGCCCTAGCTCTACCAC 62.034 65.000 7.81 0.00 40.52 4.16
290 292 1.762460 GCTGGCCCTAGCTCTACCA 60.762 63.158 7.81 0.00 40.52 3.25
291 293 3.143338 GCTGGCCCTAGCTCTACC 58.857 66.667 7.81 0.00 40.52 3.18
311 313 3.431725 GGAAACGAGCCCTTGCCG 61.432 66.667 0.00 0.00 38.69 5.69
324 326 3.922171 AAAAATGGGCAGTGTTGGAAA 57.078 38.095 0.00 0.00 0.00 3.13
344 346 3.695830 AAGGACCATTTTCAGACGCTA 57.304 42.857 0.00 0.00 0.00 4.26
360 362 3.386726 TCCTCGAAGTTGACAGAAAAGGA 59.613 43.478 0.00 0.00 0.00 3.36
365 367 3.812156 TTGTCCTCGAAGTTGACAGAA 57.188 42.857 6.78 0.00 39.34 3.02
367 369 2.218759 CGTTTGTCCTCGAAGTTGACAG 59.781 50.000 6.78 0.00 39.34 3.51
374 376 0.032952 TGGTCCGTTTGTCCTCGAAG 59.967 55.000 0.00 0.00 0.00 3.79
394 396 4.142708 TGCAAATAATGTCGATCGCTTGTT 60.143 37.500 11.09 5.75 0.00 2.83
397 399 4.614555 TTGCAAATAATGTCGATCGCTT 57.385 36.364 11.09 6.45 0.00 4.68
446 452 9.918630 CATCCAAGAAAACTCAATTGTAAATCT 57.081 29.630 5.13 2.05 0.00 2.40
493 499 5.806654 AGAATTAAACCACCACATTTGCT 57.193 34.783 0.00 0.00 0.00 3.91
568 574 2.270352 TGGATACGATCAATTGGGGC 57.730 50.000 5.42 0.00 42.51 5.80
603 610 6.500684 TCTCTTTTATGCATTGACAAGACC 57.499 37.500 3.54 0.00 0.00 3.85
619 626 4.010349 CCGGCCTACTCAATTTCTCTTTT 58.990 43.478 0.00 0.00 0.00 2.27
628 635 2.143876 ATTTTGCCGGCCTACTCAAT 57.856 45.000 26.77 9.83 0.00 2.57
681 688 2.987282 TTTTGCCTGCGACGCTCAGA 62.987 55.000 22.08 8.68 33.54 3.27
719 726 1.445095 GAGTGGAGCTCATCGGCAT 59.555 57.895 17.19 0.00 43.58 4.40
875 900 8.463607 GGTTTATATAGCCAGAGAGAGATGTAC 58.536 40.741 0.00 0.00 0.00 2.90
918 997 3.880490 TGTTGTGGAACTGTGGATACAAC 59.120 43.478 16.72 16.72 45.29 3.32
919 998 3.880490 GTGTTGTGGAACTGTGGATACAA 59.120 43.478 0.00 0.00 45.29 2.41
920 999 3.472652 GTGTTGTGGAACTGTGGATACA 58.527 45.455 0.00 0.00 41.85 2.29
921 1000 2.812011 GGTGTTGTGGAACTGTGGATAC 59.188 50.000 0.00 0.00 38.04 2.24
922 1001 2.708861 AGGTGTTGTGGAACTGTGGATA 59.291 45.455 0.00 0.00 38.04 2.59
923 1002 1.494721 AGGTGTTGTGGAACTGTGGAT 59.505 47.619 0.00 0.00 38.04 3.41
924 1003 0.916086 AGGTGTTGTGGAACTGTGGA 59.084 50.000 0.00 0.00 38.04 4.02
925 1004 1.405105 CAAGGTGTTGTGGAACTGTGG 59.595 52.381 0.00 0.00 38.04 4.17
926 1005 1.405105 CCAAGGTGTTGTGGAACTGTG 59.595 52.381 0.00 0.00 37.03 3.66
927 1006 1.762708 CCAAGGTGTTGTGGAACTGT 58.237 50.000 0.00 0.00 37.03 3.55
928 1007 0.385390 GCCAAGGTGTTGTGGAACTG 59.615 55.000 0.00 0.00 37.03 3.16
929 1008 0.258774 AGCCAAGGTGTTGTGGAACT 59.741 50.000 0.00 0.00 37.03 3.01
930 1009 1.111277 AAGCCAAGGTGTTGTGGAAC 58.889 50.000 0.00 0.00 37.03 3.62
931 1010 1.480137 CAAAGCCAAGGTGTTGTGGAA 59.520 47.619 0.00 0.00 37.03 3.53
938 1017 1.142870 TGTCTAGCAAAGCCAAGGTGT 59.857 47.619 0.00 0.00 0.00 4.16
965 1044 0.969894 CTTCACCGGAGACTTGGAGT 59.030 55.000 9.46 0.00 0.00 3.85
967 1046 1.671742 GCTTCACCGGAGACTTGGA 59.328 57.895 9.46 0.00 0.00 3.53
969 1048 0.734253 CTCGCTTCACCGGAGACTTG 60.734 60.000 9.46 0.00 0.00 3.16
970 1049 1.587054 CTCGCTTCACCGGAGACTT 59.413 57.895 9.46 0.00 0.00 3.01
971 1050 2.995872 GCTCGCTTCACCGGAGACT 61.996 63.158 9.46 0.00 0.00 3.24
972 1051 2.507324 GCTCGCTTCACCGGAGAC 60.507 66.667 9.46 0.00 0.00 3.36
1032 1166 4.824515 AGGAGGAGGAGGACGGCG 62.825 72.222 4.80 4.80 0.00 6.46
1059 1193 2.646719 GACGTACCTGTGGCGACA 59.353 61.111 0.33 0.33 38.70 4.35
1077 1211 1.661460 GCAAGAAAGAAGCACGCTGTC 60.661 52.381 0.00 0.00 0.00 3.51
1078 1212 0.308993 GCAAGAAAGAAGCACGCTGT 59.691 50.000 0.00 0.00 0.00 4.40
1082 1224 1.207593 CCGGCAAGAAAGAAGCACG 59.792 57.895 0.00 0.00 0.00 5.34
1092 1234 0.391661 GCATCTTCTCACCGGCAAGA 60.392 55.000 0.00 4.66 0.00 3.02
1096 1238 1.442526 CCATGCATCTTCTCACCGGC 61.443 60.000 0.00 0.00 0.00 6.13
1099 1241 4.314121 GTCTATCCATGCATCTTCTCACC 58.686 47.826 0.00 0.00 0.00 4.02
1130 1272 7.115805 CACGTACGAACCATAGTAATTATGCAT 59.884 37.037 24.41 3.79 38.26 3.96
1146 1288 0.179250 CTGCATGCACACGTACGAAC 60.179 55.000 24.41 8.37 0.00 3.95
1152 1294 1.022982 CCATCTCTGCATGCACACGT 61.023 55.000 18.46 0.21 0.00 4.49
1179 1321 4.722700 CGGGCCTCCACCACCTTG 62.723 72.222 0.84 0.00 0.00 3.61
1361 1521 2.306847 TGCTCTGATACGTAGCATCCA 58.693 47.619 14.77 8.81 41.15 3.41
1389 1549 1.078426 ATCTAACTGGCCGGCACAC 60.078 57.895 30.85 12.03 0.00 3.82
1390 1550 1.220749 GATCTAACTGGCCGGCACA 59.779 57.895 30.85 22.10 0.00 4.57
1392 1552 0.975556 TCAGATCTAACTGGCCGGCA 60.976 55.000 30.85 13.75 38.31 5.69
1393 1553 0.394565 ATCAGATCTAACTGGCCGGC 59.605 55.000 21.18 21.18 38.31 6.13
1394 1554 1.336332 CGATCAGATCTAACTGGCCGG 60.336 57.143 11.02 11.02 38.31 6.13
1395 1555 1.338337 ACGATCAGATCTAACTGGCCG 59.662 52.381 8.82 0.00 38.31 6.13
1396 1556 2.288518 GGACGATCAGATCTAACTGGCC 60.289 54.545 8.82 0.00 38.31 5.36
1397 1557 2.288518 GGGACGATCAGATCTAACTGGC 60.289 54.545 8.82 0.00 38.31 4.85
1398 1558 3.005261 CAGGGACGATCAGATCTAACTGG 59.995 52.174 8.82 0.00 38.31 4.00
1411 1571 2.228822 GTGAAACAAATGCAGGGACGAT 59.771 45.455 0.00 0.00 36.32 3.73
1420 1580 1.003331 TGACGGACGTGAAACAAATGC 60.003 47.619 0.53 0.00 35.74 3.56
1426 1586 2.412421 ACTACTGACGGACGTGAAAC 57.588 50.000 0.53 0.00 0.00 2.78
1448 1608 7.059033 CCATTATTGTAAACGAAACACACGAAG 59.941 37.037 0.00 0.00 34.70 3.79
1459 1619 7.106890 TGGAGATGAACCATTATTGTAAACGA 58.893 34.615 0.00 0.00 32.03 3.85
1498 1658 2.066262 CGATTGTCACCTAAAGTGCGT 58.934 47.619 0.00 0.00 46.81 5.24
1499 1659 1.393539 CCGATTGTCACCTAAAGTGCG 59.606 52.381 0.00 0.00 46.81 5.34
1500 1660 2.415512 GACCGATTGTCACCTAAAGTGC 59.584 50.000 0.00 0.00 46.81 4.40
1502 1662 2.353406 CCGACCGATTGTCACCTAAAGT 60.353 50.000 0.00 0.00 44.71 2.66
1503 1663 2.268298 CCGACCGATTGTCACCTAAAG 58.732 52.381 0.00 0.00 44.71 1.85
1504 1664 1.673626 GCCGACCGATTGTCACCTAAA 60.674 52.381 0.00 0.00 44.71 1.85
1505 1665 0.108520 GCCGACCGATTGTCACCTAA 60.109 55.000 0.00 0.00 44.71 2.69
1506 1666 1.514087 GCCGACCGATTGTCACCTA 59.486 57.895 0.00 0.00 44.71 3.08
1507 1667 2.264794 GCCGACCGATTGTCACCT 59.735 61.111 0.00 0.00 44.71 4.00
1508 1668 3.186047 CGCCGACCGATTGTCACC 61.186 66.667 0.00 0.00 44.71 4.02
1509 1669 1.562575 AAACGCCGACCGATTGTCAC 61.563 55.000 0.00 0.00 44.71 3.67
1510 1670 1.286354 GAAACGCCGACCGATTGTCA 61.286 55.000 0.00 0.00 44.71 3.58
1511 1671 1.418755 GAAACGCCGACCGATTGTC 59.581 57.895 0.00 0.00 41.02 3.18
1512 1672 2.377310 CGAAACGCCGACCGATTGT 61.377 57.895 0.00 0.00 41.02 2.71
1513 1673 2.394136 CGAAACGCCGACCGATTG 59.606 61.111 0.00 0.00 41.02 2.67
1514 1674 2.812178 CCGAAACGCCGACCGATT 60.812 61.111 0.00 0.00 41.02 3.34
1515 1675 4.060038 ACCGAAACGCCGACCGAT 62.060 61.111 0.00 0.00 41.02 4.18
1518 1678 4.974989 ACCACCGAAACGCCGACC 62.975 66.667 0.00 0.00 0.00 4.79
1519 1679 3.708734 CACCACCGAAACGCCGAC 61.709 66.667 0.00 0.00 0.00 4.79
1520 1680 2.752322 CTACACCACCGAAACGCCGA 62.752 60.000 0.00 0.00 0.00 5.54
1521 1681 2.356075 TACACCACCGAAACGCCG 60.356 61.111 0.00 0.00 0.00 6.46
1522 1682 0.881600 AACTACACCACCGAAACGCC 60.882 55.000 0.00 0.00 0.00 5.68
1523 1683 1.723003 CTAACTACACCACCGAAACGC 59.277 52.381 0.00 0.00 0.00 4.84
1524 1684 3.017265 ACTAACTACACCACCGAAACG 57.983 47.619 0.00 0.00 0.00 3.60
1525 1685 3.426525 CGAACTAACTACACCACCGAAAC 59.573 47.826 0.00 0.00 0.00 2.78
1526 1686 3.641648 CGAACTAACTACACCACCGAAA 58.358 45.455 0.00 0.00 0.00 3.46
1527 1687 2.607771 GCGAACTAACTACACCACCGAA 60.608 50.000 0.00 0.00 0.00 4.30
1528 1688 1.068333 GCGAACTAACTACACCACCGA 60.068 52.381 0.00 0.00 0.00 4.69
1529 1689 1.343506 GCGAACTAACTACACCACCG 58.656 55.000 0.00 0.00 0.00 4.94
1530 1690 1.718396 GGCGAACTAACTACACCACC 58.282 55.000 0.00 0.00 0.00 4.61
1531 1691 1.343506 CGGCGAACTAACTACACCAC 58.656 55.000 0.00 0.00 0.00 4.16
1532 1692 0.244450 CCGGCGAACTAACTACACCA 59.756 55.000 9.30 0.00 0.00 4.17
1533 1693 1.080435 GCCGGCGAACTAACTACACC 61.080 60.000 12.58 0.00 0.00 4.16
1534 1694 1.080435 GGCCGGCGAACTAACTACAC 61.080 60.000 22.54 0.00 0.00 2.90
1535 1695 1.216178 GGCCGGCGAACTAACTACA 59.784 57.895 22.54 0.00 0.00 2.74
1536 1696 1.875364 CGGCCGGCGAACTAACTAC 60.875 63.158 22.54 0.43 0.00 2.73
1537 1697 2.491152 CGGCCGGCGAACTAACTA 59.509 61.111 22.54 0.00 0.00 2.24
1551 1711 3.943479 TACATCACCACACGGCGGC 62.943 63.158 13.24 0.00 34.57 6.53
1552 1712 0.742990 ATTACATCACCACACGGCGG 60.743 55.000 13.24 2.35 34.57 6.13
1553 1713 1.929230 TATTACATCACCACACGGCG 58.071 50.000 4.80 4.80 34.57 6.46
1554 1714 2.548057 CCATATTACATCACCACACGGC 59.452 50.000 0.00 0.00 34.57 5.68
1555 1715 3.804036 ACCATATTACATCACCACACGG 58.196 45.455 0.00 0.00 38.77 4.94
1556 1716 4.438148 TGACCATATTACATCACCACACG 58.562 43.478 0.00 0.00 0.00 4.49
1557 1717 5.239306 CCATGACCATATTACATCACCACAC 59.761 44.000 0.00 0.00 0.00 3.82
1558 1718 5.375773 CCATGACCATATTACATCACCACA 58.624 41.667 0.00 0.00 0.00 4.17
1559 1719 4.761739 CCCATGACCATATTACATCACCAC 59.238 45.833 0.00 0.00 0.00 4.16
1560 1720 4.662650 TCCCATGACCATATTACATCACCA 59.337 41.667 0.00 0.00 0.00 4.17
1561 1721 5.241403 TCCCATGACCATATTACATCACC 57.759 43.478 0.00 0.00 0.00 4.02
1562 1722 5.882557 GGATCCCATGACCATATTACATCAC 59.117 44.000 0.00 0.00 0.00 3.06
1563 1723 5.044919 GGGATCCCATGACCATATTACATCA 60.045 44.000 26.95 0.00 35.81 3.07
1564 1724 5.192522 AGGGATCCCATGACCATATTACATC 59.807 44.000 32.69 0.00 38.92 3.06
1565 1725 5.110935 AGGGATCCCATGACCATATTACAT 58.889 41.667 32.69 2.61 38.92 2.29
1566 1726 4.512298 AGGGATCCCATGACCATATTACA 58.488 43.478 32.69 0.00 38.92 2.41
1567 1727 6.409695 CCATAGGGATCCCATGACCATATTAC 60.410 46.154 32.69 0.00 38.92 1.89
1568 1728 5.671735 CCATAGGGATCCCATGACCATATTA 59.328 44.000 32.69 12.26 38.92 0.98
1569 1729 4.479796 CCATAGGGATCCCATGACCATATT 59.520 45.833 32.69 10.29 38.92 1.28
1570 1730 4.050037 CCATAGGGATCCCATGACCATAT 58.950 47.826 32.69 16.16 38.92 1.78
1571 1731 3.181384 ACCATAGGGATCCCATGACCATA 60.181 47.826 32.69 14.51 38.92 2.74
1572 1732 2.281966 CCATAGGGATCCCATGACCAT 58.718 52.381 32.69 12.62 38.92 3.55
1573 1733 1.060640 ACCATAGGGATCCCATGACCA 60.061 52.381 32.69 10.32 38.92 4.02
1574 1734 1.630878 GACCATAGGGATCCCATGACC 59.369 57.143 32.69 20.36 38.92 4.02
1575 1735 2.338809 TGACCATAGGGATCCCATGAC 58.661 52.381 32.69 24.22 38.92 3.06
1576 1736 2.813338 TGACCATAGGGATCCCATGA 57.187 50.000 32.69 17.50 38.92 3.07
1577 1737 3.693807 CAATGACCATAGGGATCCCATG 58.306 50.000 32.69 28.10 38.92 3.66
1578 1738 2.042162 GCAATGACCATAGGGATCCCAT 59.958 50.000 32.69 19.93 38.92 4.00
1579 1739 1.425066 GCAATGACCATAGGGATCCCA 59.575 52.381 32.69 18.54 38.92 4.37
1580 1740 1.611673 CGCAATGACCATAGGGATCCC 60.612 57.143 24.59 24.59 38.05 3.85
1581 1741 1.072331 ACGCAATGACCATAGGGATCC 59.928 52.381 1.92 1.92 38.05 3.36
1582 1742 2.549754 CAACGCAATGACCATAGGGATC 59.450 50.000 0.00 0.00 38.05 3.36
1583 1743 2.092429 ACAACGCAATGACCATAGGGAT 60.092 45.455 0.00 0.00 38.05 3.85
1584 1744 1.280710 ACAACGCAATGACCATAGGGA 59.719 47.619 0.00 0.00 38.05 4.20
1585 1745 1.750193 ACAACGCAATGACCATAGGG 58.250 50.000 0.00 0.00 41.29 3.53
1586 1746 3.190327 TGAAACAACGCAATGACCATAGG 59.810 43.478 0.00 0.00 0.00 2.57
1587 1747 4.406069 CTGAAACAACGCAATGACCATAG 58.594 43.478 0.00 0.00 0.00 2.23
1588 1748 3.365868 GCTGAAACAACGCAATGACCATA 60.366 43.478 0.00 0.00 0.00 2.74
1589 1749 2.607771 GCTGAAACAACGCAATGACCAT 60.608 45.455 0.00 0.00 0.00 3.55
1590 1750 1.268999 GCTGAAACAACGCAATGACCA 60.269 47.619 0.00 0.00 0.00 4.02
1591 1751 1.408422 GCTGAAACAACGCAATGACC 58.592 50.000 0.00 0.00 0.00 4.02
1592 1752 1.001378 AGGCTGAAACAACGCAATGAC 60.001 47.619 0.00 0.00 0.00 3.06
1593 1753 1.317613 AGGCTGAAACAACGCAATGA 58.682 45.000 0.00 0.00 0.00 2.57
1594 1754 2.138596 AAGGCTGAAACAACGCAATG 57.861 45.000 0.00 0.00 0.00 2.82
1595 1755 2.100584 TGAAAGGCTGAAACAACGCAAT 59.899 40.909 0.00 0.00 0.00 3.56
1596 1756 1.474478 TGAAAGGCTGAAACAACGCAA 59.526 42.857 0.00 0.00 0.00 4.85
1597 1757 1.065401 CTGAAAGGCTGAAACAACGCA 59.935 47.619 0.00 0.00 0.00 5.24
1598 1758 1.758783 CTGAAAGGCTGAAACAACGC 58.241 50.000 0.00 0.00 0.00 4.84
1599 1759 1.065401 TGCTGAAAGGCTGAAACAACG 59.935 47.619 0.00 0.00 0.00 4.10
1600 1760 2.869233 TGCTGAAAGGCTGAAACAAC 57.131 45.000 0.00 0.00 0.00 3.32
1601 1761 2.036217 CCATGCTGAAAGGCTGAAACAA 59.964 45.455 0.00 0.00 0.00 2.83
1602 1762 1.614903 CCATGCTGAAAGGCTGAAACA 59.385 47.619 0.00 0.00 0.00 2.83
1603 1763 1.888512 TCCATGCTGAAAGGCTGAAAC 59.111 47.619 0.00 0.00 0.00 2.78
1604 1764 1.888512 GTCCATGCTGAAAGGCTGAAA 59.111 47.619 0.00 0.00 0.00 2.69
1605 1765 1.538047 GTCCATGCTGAAAGGCTGAA 58.462 50.000 0.00 0.00 0.00 3.02
1606 1766 0.674581 CGTCCATGCTGAAAGGCTGA 60.675 55.000 0.00 0.00 0.00 4.26
1607 1767 1.651240 CCGTCCATGCTGAAAGGCTG 61.651 60.000 0.00 0.00 0.00 4.85
1608 1768 1.377725 CCGTCCATGCTGAAAGGCT 60.378 57.895 0.00 0.00 0.00 4.58
1609 1769 1.377202 TCCGTCCATGCTGAAAGGC 60.377 57.895 0.00 0.00 0.00 4.35
1610 1770 0.321564 TGTCCGTCCATGCTGAAAGG 60.322 55.000 0.00 0.00 0.00 3.11
1611 1771 0.798776 GTGTCCGTCCATGCTGAAAG 59.201 55.000 0.00 0.00 0.00 2.62
1612 1772 0.605319 GGTGTCCGTCCATGCTGAAA 60.605 55.000 0.00 0.00 0.00 2.69
1613 1773 1.003839 GGTGTCCGTCCATGCTGAA 60.004 57.895 0.00 0.00 0.00 3.02
1614 1774 2.662596 GGTGTCCGTCCATGCTGA 59.337 61.111 0.00 0.00 0.00 4.26
1615 1775 2.436646 GGGTGTCCGTCCATGCTG 60.437 66.667 0.00 0.00 0.00 4.41
1616 1776 0.980754 TATGGGTGTCCGTCCATGCT 60.981 55.000 5.22 0.00 43.05 3.79
1617 1777 0.108585 ATATGGGTGTCCGTCCATGC 59.891 55.000 5.22 0.00 43.05 4.06
1618 1778 1.882912 CATATGGGTGTCCGTCCATG 58.117 55.000 5.22 0.00 43.05 3.66
1619 1779 0.108585 GCATATGGGTGTCCGTCCAT 59.891 55.000 4.56 0.00 44.97 3.41
1620 1780 1.268283 TGCATATGGGTGTCCGTCCA 61.268 55.000 4.56 0.00 37.46 4.02
1621 1781 0.107410 TTGCATATGGGTGTCCGTCC 60.107 55.000 4.56 0.00 35.24 4.79
1622 1782 1.603802 CATTGCATATGGGTGTCCGTC 59.396 52.381 4.56 0.00 35.24 4.79
1623 1783 1.211703 TCATTGCATATGGGTGTCCGT 59.788 47.619 4.56 0.00 35.24 4.69
1624 1784 1.965935 TCATTGCATATGGGTGTCCG 58.034 50.000 4.56 0.00 35.24 4.79
1625 1785 3.256631 GGATTCATTGCATATGGGTGTCC 59.743 47.826 4.56 7.48 0.00 4.02
1626 1786 3.058016 CGGATTCATTGCATATGGGTGTC 60.058 47.826 4.56 0.00 0.00 3.67
1627 1787 2.886523 CGGATTCATTGCATATGGGTGT 59.113 45.455 4.56 0.00 0.00 4.16
1628 1788 2.886523 ACGGATTCATTGCATATGGGTG 59.113 45.455 4.56 0.00 0.00 4.61
1629 1789 3.228188 ACGGATTCATTGCATATGGGT 57.772 42.857 4.56 0.30 0.00 4.51
1630 1790 3.365264 CGAACGGATTCATTGCATATGGG 60.365 47.826 4.56 0.00 34.14 4.00
1631 1791 3.250762 ACGAACGGATTCATTGCATATGG 59.749 43.478 4.56 0.00 34.14 2.74
1632 1792 4.213674 CACGAACGGATTCATTGCATATG 58.786 43.478 0.00 0.00 34.14 1.78
1633 1793 3.250762 CCACGAACGGATTCATTGCATAT 59.749 43.478 0.00 0.00 34.14 1.78
1634 1794 2.611751 CCACGAACGGATTCATTGCATA 59.388 45.455 0.00 0.00 34.14 3.14
1635 1795 1.401552 CCACGAACGGATTCATTGCAT 59.598 47.619 0.00 0.00 34.14 3.96
1636 1796 0.801872 CCACGAACGGATTCATTGCA 59.198 50.000 0.00 0.00 34.14 4.08
1637 1797 0.523335 GCCACGAACGGATTCATTGC 60.523 55.000 0.00 0.00 34.14 3.56
1638 1798 1.086696 AGCCACGAACGGATTCATTG 58.913 50.000 0.00 0.00 34.14 2.82
1639 1799 1.821216 AAGCCACGAACGGATTCATT 58.179 45.000 0.00 0.00 34.14 2.57
1640 1800 1.821216 AAAGCCACGAACGGATTCAT 58.179 45.000 0.00 0.00 32.18 2.57
1641 1801 2.459060 TAAAGCCACGAACGGATTCA 57.541 45.000 0.00 0.00 32.18 2.57
1642 1802 4.351131 AATTAAAGCCACGAACGGATTC 57.649 40.909 0.00 0.00 32.18 2.52
1643 1803 4.216687 TCAAATTAAAGCCACGAACGGATT 59.783 37.500 0.00 0.00 35.79 3.01
1644 1804 3.754323 TCAAATTAAAGCCACGAACGGAT 59.246 39.130 0.00 0.00 0.00 4.18
1645 1805 3.139850 TCAAATTAAAGCCACGAACGGA 58.860 40.909 0.00 0.00 0.00 4.69
1646 1806 3.546002 TCAAATTAAAGCCACGAACGG 57.454 42.857 0.00 0.00 0.00 4.44
1647 1807 7.734538 ATTATTCAAATTAAAGCCACGAACG 57.265 32.000 0.00 0.00 0.00 3.95
1672 1832 9.840427 CGTCTATACTTTTGGAAATTCACAAAT 57.160 29.630 9.33 1.65 36.57 2.32
1673 1833 9.058174 TCGTCTATACTTTTGGAAATTCACAAA 57.942 29.630 0.00 0.86 35.01 2.83
1674 1834 8.610248 TCGTCTATACTTTTGGAAATTCACAA 57.390 30.769 0.00 0.00 0.00 3.33
1675 1835 8.610248 TTCGTCTATACTTTTGGAAATTCACA 57.390 30.769 0.00 0.00 0.00 3.58
1725 1885 9.906660 TCGATTATTAAACTTGTGAGCATTTTT 57.093 25.926 0.00 0.00 0.00 1.94
1726 1886 9.906660 TTCGATTATTAAACTTGTGAGCATTTT 57.093 25.926 0.00 0.00 0.00 1.82
1727 1887 9.906660 TTTCGATTATTAAACTTGTGAGCATTT 57.093 25.926 0.00 0.00 0.00 2.32
1728 1888 9.559958 CTTTCGATTATTAAACTTGTGAGCATT 57.440 29.630 0.00 0.00 0.00 3.56
1729 1889 8.184192 CCTTTCGATTATTAAACTTGTGAGCAT 58.816 33.333 0.00 0.00 0.00 3.79
1730 1890 7.389330 TCCTTTCGATTATTAAACTTGTGAGCA 59.611 33.333 0.00 0.00 0.00 4.26
1731 1891 7.748847 TCCTTTCGATTATTAAACTTGTGAGC 58.251 34.615 0.00 0.00 0.00 4.26
1732 1892 9.760660 CTTCCTTTCGATTATTAAACTTGTGAG 57.239 33.333 0.00 0.00 0.00 3.51
1733 1893 9.496873 TCTTCCTTTCGATTATTAAACTTGTGA 57.503 29.630 0.00 0.00 0.00 3.58
1743 1903 9.639601 GGTTTTCATTTCTTCCTTTCGATTATT 57.360 29.630 0.00 0.00 0.00 1.40
1744 1904 7.968405 CGGTTTTCATTTCTTCCTTTCGATTAT 59.032 33.333 0.00 0.00 0.00 1.28
1745 1905 7.173562 TCGGTTTTCATTTCTTCCTTTCGATTA 59.826 33.333 0.00 0.00 0.00 1.75
1746 1906 6.016610 TCGGTTTTCATTTCTTCCTTTCGATT 60.017 34.615 0.00 0.00 0.00 3.34
1747 1907 5.472137 TCGGTTTTCATTTCTTCCTTTCGAT 59.528 36.000 0.00 0.00 0.00 3.59
1748 1908 4.817464 TCGGTTTTCATTTCTTCCTTTCGA 59.183 37.500 0.00 0.00 0.00 3.71
1749 1909 4.909880 GTCGGTTTTCATTTCTTCCTTTCG 59.090 41.667 0.00 0.00 0.00 3.46
1750 1910 5.827666 TGTCGGTTTTCATTTCTTCCTTTC 58.172 37.500 0.00 0.00 0.00 2.62
1751 1911 5.845391 TGTCGGTTTTCATTTCTTCCTTT 57.155 34.783 0.00 0.00 0.00 3.11
1752 1912 5.845391 TTGTCGGTTTTCATTTCTTCCTT 57.155 34.783 0.00 0.00 0.00 3.36
1753 1913 5.845391 TTTGTCGGTTTTCATTTCTTCCT 57.155 34.783 0.00 0.00 0.00 3.36
1754 1914 5.051973 CGTTTTGTCGGTTTTCATTTCTTCC 60.052 40.000 0.00 0.00 0.00 3.46
1755 1915 5.740099 TCGTTTTGTCGGTTTTCATTTCTTC 59.260 36.000 0.00 0.00 0.00 2.87
1756 1916 5.642686 TCGTTTTGTCGGTTTTCATTTCTT 58.357 33.333 0.00 0.00 0.00 2.52
1757 1917 5.238006 TCGTTTTGTCGGTTTTCATTTCT 57.762 34.783 0.00 0.00 0.00 2.52
1758 1918 5.935448 TTCGTTTTGTCGGTTTTCATTTC 57.065 34.783 0.00 0.00 0.00 2.17
1759 1919 5.634020 TGTTTCGTTTTGTCGGTTTTCATTT 59.366 32.000 0.00 0.00 0.00 2.32
1760 1920 5.162075 TGTTTCGTTTTGTCGGTTTTCATT 58.838 33.333 0.00 0.00 0.00 2.57
1761 1921 4.734917 TGTTTCGTTTTGTCGGTTTTCAT 58.265 34.783 0.00 0.00 0.00 2.57
1762 1922 4.156664 TGTTTCGTTTTGTCGGTTTTCA 57.843 36.364 0.00 0.00 0.00 2.69
1763 1923 6.139638 GTCTATGTTTCGTTTTGTCGGTTTTC 59.860 38.462 0.00 0.00 0.00 2.29
1764 1924 5.967088 GTCTATGTTTCGTTTTGTCGGTTTT 59.033 36.000 0.00 0.00 0.00 2.43
1765 1925 5.295045 AGTCTATGTTTCGTTTTGTCGGTTT 59.705 36.000 0.00 0.00 0.00 3.27
1766 1926 4.812626 AGTCTATGTTTCGTTTTGTCGGTT 59.187 37.500 0.00 0.00 0.00 4.44
1767 1927 4.374399 AGTCTATGTTTCGTTTTGTCGGT 58.626 39.130 0.00 0.00 0.00 4.69
1768 1928 4.985044 AGTCTATGTTTCGTTTTGTCGG 57.015 40.909 0.00 0.00 0.00 4.79
1769 1929 6.007677 GCTTAGTCTATGTTTCGTTTTGTCG 58.992 40.000 0.00 0.00 0.00 4.35
1770 1930 6.007677 CGCTTAGTCTATGTTTCGTTTTGTC 58.992 40.000 0.00 0.00 0.00 3.18
1771 1931 5.107220 CCGCTTAGTCTATGTTTCGTTTTGT 60.107 40.000 0.00 0.00 0.00 2.83
1772 1932 5.313623 CCGCTTAGTCTATGTTTCGTTTTG 58.686 41.667 0.00 0.00 0.00 2.44
1773 1933 4.142966 GCCGCTTAGTCTATGTTTCGTTTT 60.143 41.667 0.00 0.00 0.00 2.43
1774 1934 3.370061 GCCGCTTAGTCTATGTTTCGTTT 59.630 43.478 0.00 0.00 0.00 3.60
1775 1935 2.928116 GCCGCTTAGTCTATGTTTCGTT 59.072 45.455 0.00 0.00 0.00 3.85
1776 1936 2.537401 GCCGCTTAGTCTATGTTTCGT 58.463 47.619 0.00 0.00 0.00 3.85
1777 1937 1.859080 GGCCGCTTAGTCTATGTTTCG 59.141 52.381 0.00 0.00 0.00 3.46
1778 1938 3.124560 GAGGCCGCTTAGTCTATGTTTC 58.875 50.000 0.00 0.00 0.00 2.78
1779 1939 2.500098 TGAGGCCGCTTAGTCTATGTTT 59.500 45.455 8.34 0.00 0.00 2.83
1780 1940 2.108168 TGAGGCCGCTTAGTCTATGTT 58.892 47.619 8.34 0.00 0.00 2.71
1781 1941 1.776662 TGAGGCCGCTTAGTCTATGT 58.223 50.000 8.34 0.00 0.00 2.29
1782 1942 2.890808 TTGAGGCCGCTTAGTCTATG 57.109 50.000 8.34 0.00 0.00 2.23
1783 1943 4.081420 CCATATTGAGGCCGCTTAGTCTAT 60.081 45.833 8.34 0.00 0.00 1.98
1784 1944 3.258372 CCATATTGAGGCCGCTTAGTCTA 59.742 47.826 8.34 0.00 0.00 2.59
1785 1945 2.037772 CCATATTGAGGCCGCTTAGTCT 59.962 50.000 8.34 0.00 0.00 3.24
1786 1946 2.224305 ACCATATTGAGGCCGCTTAGTC 60.224 50.000 8.34 0.00 0.00 2.59
1787 1947 1.768870 ACCATATTGAGGCCGCTTAGT 59.231 47.619 8.34 0.00 0.00 2.24
1788 1948 2.224281 TGACCATATTGAGGCCGCTTAG 60.224 50.000 8.34 0.00 0.00 2.18
1789 1949 1.765904 TGACCATATTGAGGCCGCTTA 59.234 47.619 8.34 0.00 0.00 3.09
1790 1950 0.546122 TGACCATATTGAGGCCGCTT 59.454 50.000 8.34 0.00 0.00 4.68
1791 1951 0.767375 ATGACCATATTGAGGCCGCT 59.233 50.000 8.34 0.00 0.00 5.52
1792 1952 1.267806 CAATGACCATATTGAGGCCGC 59.732 52.381 0.00 0.00 39.79 6.53
1793 1953 1.267806 GCAATGACCATATTGAGGCCG 59.732 52.381 0.00 0.00 39.79 6.13
1794 1954 1.267806 CGCAATGACCATATTGAGGCC 59.732 52.381 0.00 0.00 39.79 5.19
1795 1955 1.949525 ACGCAATGACCATATTGAGGC 59.050 47.619 0.00 0.00 40.65 4.70
1796 1956 3.378112 ACAACGCAATGACCATATTGAGG 59.622 43.478 0.00 0.00 40.65 3.86
1797 1957 4.621068 ACAACGCAATGACCATATTGAG 57.379 40.909 0.00 0.00 41.64 3.02
1798 1958 4.380339 CCAACAACGCAATGACCATATTGA 60.380 41.667 0.00 0.00 39.79 2.57
1799 1959 3.858812 CCAACAACGCAATGACCATATTG 59.141 43.478 0.00 0.00 40.25 1.90
1800 1960 3.761218 TCCAACAACGCAATGACCATATT 59.239 39.130 0.00 0.00 0.00 1.28
1801 1961 3.351740 TCCAACAACGCAATGACCATAT 58.648 40.909 0.00 0.00 0.00 1.78
1802 1962 2.784347 TCCAACAACGCAATGACCATA 58.216 42.857 0.00 0.00 0.00 2.74
1803 1963 1.614996 TCCAACAACGCAATGACCAT 58.385 45.000 0.00 0.00 0.00 3.55
1804 1964 1.393603 TTCCAACAACGCAATGACCA 58.606 45.000 0.00 0.00 0.00 4.02
1805 1965 2.500509 TTTCCAACAACGCAATGACC 57.499 45.000 0.00 0.00 0.00 4.02
1806 1966 4.562394 CCATATTTCCAACAACGCAATGAC 59.438 41.667 0.00 0.00 0.00 3.06
1807 1967 4.460731 TCCATATTTCCAACAACGCAATGA 59.539 37.500 0.00 0.00 0.00 2.57
1808 1968 4.742417 TCCATATTTCCAACAACGCAATG 58.258 39.130 0.00 0.00 0.00 2.82
1809 1969 5.596836 ATCCATATTTCCAACAACGCAAT 57.403 34.783 0.00 0.00 0.00 3.56
1810 1970 5.067153 CCTATCCATATTTCCAACAACGCAA 59.933 40.000 0.00 0.00 0.00 4.85
1811 1971 4.578516 CCTATCCATATTTCCAACAACGCA 59.421 41.667 0.00 0.00 0.00 5.24
1812 1972 4.556699 GCCTATCCATATTTCCAACAACGC 60.557 45.833 0.00 0.00 0.00 4.84
1813 1973 4.821805 AGCCTATCCATATTTCCAACAACG 59.178 41.667 0.00 0.00 0.00 4.10
1814 1974 6.770785 TGTAGCCTATCCATATTTCCAACAAC 59.229 38.462 0.00 0.00 0.00 3.32
1854 2014 5.127519 TGGCCAACCTTTATCTTCATCATTG 59.872 40.000 0.61 0.00 36.63 2.82
1867 2027 8.436778 ACTCTTTTATAAAATTGGCCAACCTTT 58.563 29.630 23.27 23.59 36.63 3.11
1900 2060 9.920946 AATATGTGAGATAGTTTTATGGGTTGT 57.079 29.630 0.00 0.00 0.00 3.32
1965 2125 6.128391 TGCTCAATACTAATGTTTGACCGAAC 60.128 38.462 0.00 0.00 0.00 3.95
1994 2155 9.384682 GCAAAAACTTACAATTTGAATCCATTG 57.615 29.630 2.79 1.91 36.41 2.82
1995 2156 9.118300 TGCAAAAACTTACAATTTGAATCCATT 57.882 25.926 2.79 0.00 36.41 3.16
1997 2158 7.768120 AGTGCAAAAACTTACAATTTGAATCCA 59.232 29.630 2.79 0.00 36.41 3.41
2100 3534 5.721960 AGGAAGGGCTATATACACACCTATG 59.278 44.000 0.00 0.00 0.00 2.23
2105 3539 3.573110 ACGAGGAAGGGCTATATACACAC 59.427 47.826 0.00 0.00 0.00 3.82
2119 3553 4.082136 GGAAGGGCTATATACACGAGGAAG 60.082 50.000 0.00 0.00 0.00 3.46
2123 3557 4.337145 AGAGGAAGGGCTATATACACGAG 58.663 47.826 0.00 0.00 0.00 4.18
2125 3559 6.585695 TTAAGAGGAAGGGCTATATACACG 57.414 41.667 0.00 0.00 0.00 4.49
2126 3560 8.135382 TGATTAAGAGGAAGGGCTATATACAC 57.865 38.462 0.00 0.00 0.00 2.90
2127 3561 8.177456 TCTGATTAAGAGGAAGGGCTATATACA 58.823 37.037 0.00 0.00 0.00 2.29
2128 3562 8.596781 TCTGATTAAGAGGAAGGGCTATATAC 57.403 38.462 0.00 0.00 0.00 1.47
2129 3563 9.206690 CATCTGATTAAGAGGAAGGGCTATATA 57.793 37.037 0.00 0.00 39.10 0.86
2130 3564 7.903481 TCATCTGATTAAGAGGAAGGGCTATAT 59.097 37.037 0.00 0.00 42.57 0.86
2131 3565 7.248976 TCATCTGATTAAGAGGAAGGGCTATA 58.751 38.462 0.00 0.00 42.57 1.31
2132 3566 6.087456 TCATCTGATTAAGAGGAAGGGCTAT 58.913 40.000 0.00 0.00 42.57 2.97
2133 3567 5.467738 TCATCTGATTAAGAGGAAGGGCTA 58.532 41.667 0.00 0.00 42.57 3.93
2134 3568 4.302067 TCATCTGATTAAGAGGAAGGGCT 58.698 43.478 0.00 0.00 42.57 5.19
2135 3569 4.696479 TCATCTGATTAAGAGGAAGGGC 57.304 45.455 0.00 0.00 42.57 5.19
2142 3576 6.018098 GCACCACTGAATCATCTGATTAAGAG 60.018 42.308 19.75 13.46 42.94 2.85
2143 3577 5.819379 GCACCACTGAATCATCTGATTAAGA 59.181 40.000 19.75 2.67 42.94 2.10
2144 3578 5.587443 TGCACCACTGAATCATCTGATTAAG 59.413 40.000 13.56 13.56 44.85 1.85
2184 3618 7.526608 TGGTTAATTCATCGCTAGAACAAAAG 58.473 34.615 0.00 0.00 0.00 2.27
2185 3619 7.441890 TGGTTAATTCATCGCTAGAACAAAA 57.558 32.000 0.00 0.00 0.00 2.44
2247 3681 8.492673 TCTATTTTGCACTAACCTGTGAATAG 57.507 34.615 0.00 0.00 40.12 1.73
2249 3683 7.831193 AGATCTATTTTGCACTAACCTGTGAAT 59.169 33.333 0.00 0.00 40.12 2.57
2251 3685 6.711277 AGATCTATTTTGCACTAACCTGTGA 58.289 36.000 0.00 0.00 40.12 3.58
2252 3686 6.820656 AGAGATCTATTTTGCACTAACCTGTG 59.179 38.462 0.00 0.00 40.62 3.66
2255 3689 8.312669 AGTAGAGATCTATTTTGCACTAACCT 57.687 34.615 0.00 0.00 0.00 3.50
2279 3713 6.234177 GGATCAAATACTCCATGTCCCTAAG 58.766 44.000 0.00 0.00 0.00 2.18
2280 3714 5.073144 GGGATCAAATACTCCATGTCCCTAA 59.927 44.000 3.98 0.00 40.67 2.69
2281 3715 4.597507 GGGATCAAATACTCCATGTCCCTA 59.402 45.833 3.98 0.00 40.67 3.53
2282 3716 3.395941 GGGATCAAATACTCCATGTCCCT 59.604 47.826 3.98 0.00 40.67 4.20
2283 3717 3.756117 GGGATCAAATACTCCATGTCCC 58.244 50.000 0.00 0.00 37.49 4.46
2284 3718 3.071023 TCGGGATCAAATACTCCATGTCC 59.929 47.826 0.00 0.00 32.90 4.02
2285 3719 4.310769 CTCGGGATCAAATACTCCATGTC 58.689 47.826 0.00 0.00 32.90 3.06
2286 3720 3.495100 GCTCGGGATCAAATACTCCATGT 60.495 47.826 0.00 0.00 32.90 3.21
2287 3721 3.070018 GCTCGGGATCAAATACTCCATG 58.930 50.000 0.00 0.00 32.90 3.66
2288 3722 2.975489 AGCTCGGGATCAAATACTCCAT 59.025 45.455 0.00 0.00 32.90 3.41
2289 3723 2.365617 GAGCTCGGGATCAAATACTCCA 59.634 50.000 0.00 0.00 32.90 3.86
2290 3724 2.365617 TGAGCTCGGGATCAAATACTCC 59.634 50.000 0.00 0.00 34.74 3.85
2291 3725 3.735237 TGAGCTCGGGATCAAATACTC 57.265 47.619 0.00 0.00 34.74 2.59
2292 3726 5.728471 CATATGAGCTCGGGATCAAATACT 58.272 41.667 7.61 0.00 41.37 2.12
2293 3727 4.331168 GCATATGAGCTCGGGATCAAATAC 59.669 45.833 7.61 0.00 41.37 1.89
2294 3728 4.223700 AGCATATGAGCTCGGGATCAAATA 59.776 41.667 7.61 0.00 42.18 1.40
2295 3729 3.008813 AGCATATGAGCTCGGGATCAAAT 59.991 43.478 7.61 0.00 42.18 2.32
2296 3730 2.369860 AGCATATGAGCTCGGGATCAAA 59.630 45.455 7.61 0.00 42.18 2.69
2297 3731 1.973515 AGCATATGAGCTCGGGATCAA 59.026 47.619 7.61 0.00 42.18 2.57
2298 3732 1.637338 AGCATATGAGCTCGGGATCA 58.363 50.000 5.33 5.33 42.18 2.92
2316 3750 3.242413 CGATTTTACTGTTCATGCGGGAG 60.242 47.826 0.00 0.00 0.00 4.30
2317 3751 2.675844 CGATTTTACTGTTCATGCGGGA 59.324 45.455 0.00 0.00 0.00 5.14
2318 3752 2.675844 TCGATTTTACTGTTCATGCGGG 59.324 45.455 0.00 0.00 0.00 6.13
2319 3753 4.335082 TTCGATTTTACTGTTCATGCGG 57.665 40.909 0.00 0.00 0.00 5.69
2320 3754 6.667981 TTTTTCGATTTTACTGTTCATGCG 57.332 33.333 0.00 0.00 0.00 4.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.