Multiple sequence alignment - TraesCS1D01G011400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G011400 chr1D 100.000 2877 0 0 1 2877 6269342 6266466 0.000000e+00 5313.0
1 TraesCS1D01G011400 chr1D 100.000 1492 0 0 4233 5724 6265110 6263619 0.000000e+00 2756.0
2 TraesCS1D01G011400 chr1D 100.000 669 0 0 3264 3932 6266079 6265411 0.000000e+00 1236.0
3 TraesCS1D01G011400 chr1D 94.382 267 15 0 2533 2799 6266756 6266490 1.480000e-110 411.0
4 TraesCS1D01G011400 chr1D 94.382 267 15 0 2587 2853 6266810 6266544 1.480000e-110 411.0
5 TraesCS1D01G011400 chr1D 92.958 213 15 0 2533 2745 6266702 6266490 1.550000e-80 311.0
6 TraesCS1D01G011400 chr1D 92.958 213 15 0 2641 2853 6266810 6266598 1.550000e-80 311.0
7 TraesCS1D01G011400 chr1D 90.506 158 15 0 3577 3734 6265568 6265411 5.810000e-50 209.0
8 TraesCS1D01G011400 chr1D 90.506 158 15 0 3775 3932 6265766 6265609 5.810000e-50 209.0
9 TraesCS1D01G011400 chr1D 91.200 125 11 0 3799 3923 6265110 6264986 2.740000e-38 171.0
10 TraesCS1D01G011400 chr1D 91.200 125 11 0 4233 4357 6265544 6265420 2.740000e-38 171.0
11 TraesCS1D01G011400 chr1D 88.800 125 14 0 3601 3725 6265110 6264986 2.760000e-33 154.0
12 TraesCS1D01G011400 chr1D 88.800 125 14 0 4233 4357 6265742 6265618 2.760000e-33 154.0
13 TraesCS1D01G011400 chr1D 77.055 292 47 14 3619 3891 6266800 6266510 3.570000e-32 150.0
14 TraesCS1D01G011400 chr1D 81.421 183 25 6 3718 3891 6266746 6266564 2.150000e-29 141.0
15 TraesCS1D01G011400 chr1D 89.524 105 11 0 2533 2637 6266594 6266490 3.600000e-27 134.0
16 TraesCS1D01G011400 chr1D 78.142 183 31 6 3718 3891 6266800 6266618 2.180000e-19 108.0
17 TraesCS1D01G011400 chr1D 88.000 75 9 0 3817 3891 6266746 6266672 7.900000e-14 89.8
18 TraesCS1D01G011400 chr1B 94.310 2232 107 11 631 2853 8273870 8271650 0.000000e+00 3400.0
19 TraesCS1D01G011400 chr1B 93.537 882 35 6 4251 5110 8270322 8269441 0.000000e+00 1293.0
20 TraesCS1D01G011400 chr1B 91.475 434 31 1 5291 5724 8269409 8268982 4.940000e-165 592.0
21 TraesCS1D01G011400 chr1B 83.821 513 46 22 79 559 8274436 8273929 2.430000e-123 453.0
22 TraesCS1D01G011400 chr1B 93.706 286 17 1 3466 3750 8271052 8270767 1.470000e-115 427.0
23 TraesCS1D01G011400 chr1B 87.246 345 44 0 2533 2877 8271862 8271518 1.490000e-105 394.0
24 TraesCS1D01G011400 chr1B 88.997 309 7 3 3264 3545 8271334 8271026 1.960000e-94 357.0
25 TraesCS1D01G011400 chr1B 86.891 267 35 0 2587 2853 8271970 8271704 3.350000e-77 300.0
26 TraesCS1D01G011400 chr1B 88.263 213 25 0 2641 2853 8271970 8271758 7.360000e-64 255.0
27 TraesCS1D01G011400 chr1B 86.782 174 23 0 3676 3849 8270940 8270767 1.630000e-45 195.0
28 TraesCS1D01G011400 chr1B 92.523 107 8 0 3817 3923 8270322 8270216 2.760000e-33 154.0
29 TraesCS1D01G011400 chr1B 86.719 128 17 0 4422 4549 8270247 8270120 5.980000e-30 143.0
30 TraesCS1D01G011400 chr1B 93.846 65 4 0 553 617 665064373 665064437 1.310000e-16 99.0
31 TraesCS1D01G011400 chr1B 92.063 63 5 0 3818 3880 8271905 8271843 7.900000e-14 89.8
32 TraesCS1D01G011400 chr1A 95.002 2161 74 15 623 2761 7336224 7334076 0.000000e+00 3362.0
33 TraesCS1D01G011400 chr1A 87.664 916 66 20 4329 5208 7332817 7331913 0.000000e+00 1022.0
34 TraesCS1D01G011400 chr1A 86.667 585 46 16 1 558 7336854 7336275 2.270000e-173 619.0
35 TraesCS1D01G011400 chr1A 86.250 320 35 5 4233 4549 7332961 7332648 7.100000e-89 339.0
36 TraesCS1D01G011400 chr1A 90.421 261 19 2 2561 2815 7334336 7334076 7.100000e-89 339.0
37 TraesCS1D01G011400 chr1A 91.532 248 15 2 2612 2853 7334339 7334092 2.560000e-88 337.0
38 TraesCS1D01G011400 chr1A 92.547 161 12 0 3763 3923 7332997 7332837 1.240000e-56 231.0
39 TraesCS1D01G011400 chr1A 85.906 149 21 0 4305 4453 7332748 7332600 5.940000e-35 159.0
40 TraesCS1D01G011400 chr3B 76.283 721 145 25 1291 1998 121576020 121576727 1.520000e-95 361.0
41 TraesCS1D01G011400 chr3A 74.933 750 155 30 1267 1998 88854788 88855522 4.310000e-81 313.0
42 TraesCS1D01G011400 chr2B 100.000 65 0 0 553 617 767124855 767124791 2.800000e-23 121.0
43 TraesCS1D01G011400 chr5D 98.462 65 1 0 553 617 36255867 36255931 1.300000e-21 115.0
44 TraesCS1D01G011400 chr7A 96.923 65 2 0 553 617 100626307 100626371 6.060000e-20 110.0
45 TraesCS1D01G011400 chr4A 93.846 65 4 0 553 617 47388364 47388428 1.310000e-16 99.0
46 TraesCS1D01G011400 chr7B 95.000 60 2 1 1182 1241 688051831 688051773 6.110000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G011400 chr1D 6263619 6269342 5723 True 691.100000 5313 90.546333 1 5724 18 chr1D.!!$R1 5723
1 TraesCS1D01G011400 chr1B 8268982 8274436 5454 True 619.446154 3400 89.717923 79 5724 13 chr1B.!!$R1 5645
2 TraesCS1D01G011400 chr1A 7331913 7336854 4941 True 801.000000 3362 89.498625 1 5208 8 chr1A.!!$R1 5207
3 TraesCS1D01G011400 chr3B 121576020 121576727 707 False 361.000000 361 76.283000 1291 1998 1 chr3B.!!$F1 707
4 TraesCS1D01G011400 chr3A 88854788 88855522 734 False 313.000000 313 74.933000 1267 1998 1 chr3A.!!$F1 731

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
712 754 0.391130 CGAACGCCATGGAAGAAGGA 60.391 55.0 18.4 0.0 0.00 3.36 F
761 811 0.785979 GCAAAGCAGCACCGAAATTG 59.214 50.0 0.0 0.0 0.00 2.32 F
2564 2627 1.064825 CCACAGGGACCAGTTAAGGT 58.935 55.0 0.0 0.0 46.82 3.50 F
3922 5699 0.321653 CCAGTAAGCTCACCACCACC 60.322 60.0 0.0 0.0 0.00 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2548 2611 1.064825 ACCACCTTAACTGGTCCCTG 58.935 55.0 0.00 0.00 37.47 4.45 R
2577 2640 1.433534 GAAGAACCTTCTCTGGTGCG 58.566 55.0 0.00 0.00 40.60 5.34 R
4238 6015 0.247736 GGTGGTGGTGAGCTCACTAG 59.752 60.0 38.17 0.00 45.73 2.57 R
4878 6713 0.731514 ATACACTTCACCGTCGCACG 60.732 55.0 2.27 2.27 42.11 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
131 133 4.778534 ATGCATGGAAGAAGTTGACAAG 57.221 40.909 0.00 0.00 0.00 3.16
430 459 6.378564 TGGTTTCATGAAGTTTTACCAAGTGA 59.621 34.615 21.33 3.60 31.71 3.41
441 470 4.974368 TTACCAAGTGACACCAAGTTTG 57.026 40.909 0.84 0.00 0.00 2.93
442 471 3.080300 ACCAAGTGACACCAAGTTTGA 57.920 42.857 0.84 0.00 0.00 2.69
508 540 3.587061 TGATCCTGTCTTGAGGCCTTTTA 59.413 43.478 6.77 0.00 32.51 1.52
561 600 9.958180 TGATAATTTAGACTTCTTGTCCAATCA 57.042 29.630 0.00 0.00 46.46 2.57
566 605 7.730364 TTAGACTTCTTGTCCAATCAAAGAC 57.270 36.000 0.00 0.00 46.46 3.01
568 607 5.762218 AGACTTCTTGTCCAATCAAAGACAG 59.238 40.000 0.00 0.00 46.46 3.51
569 608 4.276926 ACTTCTTGTCCAATCAAAGACAGC 59.723 41.667 0.00 0.00 43.48 4.40
570 609 3.149196 TCTTGTCCAATCAAAGACAGCC 58.851 45.455 0.00 0.00 43.48 4.85
571 610 2.655090 TGTCCAATCAAAGACAGCCA 57.345 45.000 0.00 0.00 38.07 4.75
573 612 3.295093 TGTCCAATCAAAGACAGCCAAA 58.705 40.909 0.00 0.00 38.07 3.28
574 613 3.896888 TGTCCAATCAAAGACAGCCAAAT 59.103 39.130 0.00 0.00 38.07 2.32
575 614 4.022068 TGTCCAATCAAAGACAGCCAAATC 60.022 41.667 0.00 0.00 38.07 2.17
576 615 4.022068 GTCCAATCAAAGACAGCCAAATCA 60.022 41.667 0.00 0.00 33.08 2.57
579 618 2.238521 TCAAAGACAGCCAAATCACCC 58.761 47.619 0.00 0.00 0.00 4.61
580 619 1.273327 CAAAGACAGCCAAATCACCCC 59.727 52.381 0.00 0.00 0.00 4.95
581 620 0.482446 AAGACAGCCAAATCACCCCA 59.518 50.000 0.00 0.00 0.00 4.96
582 621 0.706433 AGACAGCCAAATCACCCCAT 59.294 50.000 0.00 0.00 0.00 4.00
584 623 2.024414 GACAGCCAAATCACCCCATAC 58.976 52.381 0.00 0.00 0.00 2.39
586 625 0.623723 AGCCAAATCACCCCATACGT 59.376 50.000 0.00 0.00 0.00 3.57
587 626 1.841277 AGCCAAATCACCCCATACGTA 59.159 47.619 0.00 0.00 0.00 3.57
591 630 3.371166 CCAAATCACCCCATACGTAAGGT 60.371 47.826 15.27 11.94 46.39 3.50
593 632 4.677673 AATCACCCCATACGTAAGGTAC 57.322 45.455 15.27 0.00 46.39 3.34
611 650 6.769608 AGGTACGTAAAAACCTTTTCGTAG 57.230 37.500 1.73 0.00 45.45 3.51
612 651 6.512297 AGGTACGTAAAAACCTTTTCGTAGA 58.488 36.000 1.73 0.00 45.45 2.59
613 652 7.154656 AGGTACGTAAAAACCTTTTCGTAGAT 58.845 34.615 1.73 1.06 45.45 1.98
614 653 7.116805 AGGTACGTAAAAACCTTTTCGTAGATG 59.883 37.037 1.73 0.00 45.45 2.90
615 654 6.849588 ACGTAAAAACCTTTTCGTAGATGT 57.150 33.333 1.22 0.00 43.84 3.06
616 655 7.945033 ACGTAAAAACCTTTTCGTAGATGTA 57.055 32.000 1.22 0.00 43.84 2.29
617 656 7.787084 ACGTAAAAACCTTTTCGTAGATGTAC 58.213 34.615 1.22 0.00 43.84 2.90
649 689 1.338579 CCTGAGGCAGTGAGGAAAGAC 60.339 57.143 0.00 0.00 0.00 3.01
692 734 1.133253 CGTCGCATGCAAGGAACAG 59.867 57.895 19.57 0.00 0.00 3.16
693 735 1.154150 GTCGCATGCAAGGAACAGC 60.154 57.895 19.57 0.00 0.00 4.40
708 750 1.741401 CAGCGAACGCCATGGAAGA 60.741 57.895 18.40 0.00 43.17 2.87
709 751 1.003839 AGCGAACGCCATGGAAGAA 60.004 52.632 18.40 0.00 43.17 2.52
710 752 1.021390 AGCGAACGCCATGGAAGAAG 61.021 55.000 18.40 4.15 43.17 2.85
711 753 1.982073 GCGAACGCCATGGAAGAAGG 61.982 60.000 18.40 0.00 34.56 3.46
712 754 0.391130 CGAACGCCATGGAAGAAGGA 60.391 55.000 18.40 0.00 0.00 3.36
713 755 1.821216 GAACGCCATGGAAGAAGGAA 58.179 50.000 18.40 0.00 0.00 3.36
714 756 1.740025 GAACGCCATGGAAGAAGGAAG 59.260 52.381 18.40 0.00 0.00 3.46
761 811 0.785979 GCAAAGCAGCACCGAAATTG 59.214 50.000 0.00 0.00 0.00 2.32
762 812 1.869342 GCAAAGCAGCACCGAAATTGT 60.869 47.619 0.00 0.00 0.00 2.71
763 813 2.053627 CAAAGCAGCACCGAAATTGTC 58.946 47.619 0.00 0.00 0.00 3.18
861 911 2.311688 ATAGCCCTCCACCGCGAAAG 62.312 60.000 8.23 0.00 0.00 2.62
882 932 2.433446 GCCATCGGCCATCCATCT 59.567 61.111 2.24 0.00 44.06 2.90
883 933 1.970114 GCCATCGGCCATCCATCTG 60.970 63.158 2.24 0.00 44.06 2.90
884 934 1.970114 CCATCGGCCATCCATCTGC 60.970 63.158 2.24 0.00 0.00 4.26
924 978 1.227645 GCTCCCACGCATGCATAGA 60.228 57.895 19.57 7.48 0.00 1.98
2091 2148 2.672478 CGCATCCAACTTCTTCGAGTCT 60.672 50.000 0.00 0.00 0.00 3.24
2343 2400 2.063979 AATGGAGATCCCGACGCCA 61.064 57.895 0.00 0.00 40.96 5.69
2433 2496 1.139654 GATGAGTATGCTGGTGCTCCA 59.860 52.381 7.39 7.39 42.05 3.86
2548 2611 2.281484 TGAAGGCGCTTCCACCAC 60.281 61.111 7.64 0.00 39.51 4.16
2549 2612 2.281484 GAAGGCGCTTCCACCACA 60.281 61.111 7.64 0.00 34.71 4.17
2553 2616 4.329545 GCGCTTCCACCACAGGGA 62.330 66.667 0.00 0.00 38.05 4.20
2556 2619 2.829384 GCTTCCACCACAGGGACCA 61.829 63.158 0.00 0.00 38.05 4.02
2564 2627 1.064825 CCACAGGGACCAGTTAAGGT 58.935 55.000 0.00 0.00 46.82 3.50
2566 2629 1.064825 ACAGGGACCAGTTAAGGTGG 58.935 55.000 2.70 2.70 43.38 4.61
2596 2659 1.433534 CGCACCAGAGAAGGTTCTTC 58.566 55.000 0.00 0.00 40.77 2.87
2604 2667 0.396811 AGAAGGTTCTTCCACCACCG 59.603 55.000 4.26 0.00 39.62 4.94
2607 2670 1.052124 AGGTTCTTCCACCACCGACA 61.052 55.000 0.00 0.00 39.62 4.35
2610 2673 2.032071 CTTCCACCACCGACACCC 59.968 66.667 0.00 0.00 0.00 4.61
2682 2745 3.423154 GTGAAGGTGCTTCCGCCG 61.423 66.667 0.00 0.00 46.42 6.46
2844 3072 2.281484 GTGAAGGTGCTTCCGCCA 60.281 61.111 0.00 0.00 44.28 5.69
3332 3560 1.488393 CCTCCTGTGAAATCTCCTCCC 59.512 57.143 0.00 0.00 0.00 4.30
3362 3614 1.344942 CGAAGAAGTCTCCGCCAACG 61.345 60.000 0.00 0.00 39.67 4.10
3421 3673 2.027625 CACCAACTCCGGCGAAGTC 61.028 63.158 9.30 0.00 0.00 3.01
3435 3687 1.378124 GAAGTCGTCTCCTCCTCCGG 61.378 65.000 0.00 0.00 0.00 5.14
3526 3835 2.180276 ACCTACGCCTGAGAAGTCATT 58.820 47.619 0.00 0.00 30.18 2.57
3549 3858 1.995626 CCTCCGGTGAAGTCCCCAT 60.996 63.158 4.76 0.00 0.00 4.00
3559 3868 2.034999 GTCCCCATCACCGCCAAA 59.965 61.111 0.00 0.00 0.00 3.28
3626 3935 2.357517 GTGAGCTCACCACCACCG 60.358 66.667 32.55 0.00 40.85 4.94
3659 3968 3.953775 CTTCCACCACCCGCACCT 61.954 66.667 0.00 0.00 0.00 4.00
3675 3984 0.398318 ACCTGAGAAGGTGCTTCCAC 59.602 55.000 0.00 0.00 40.98 4.02
3683 3992 3.749981 GTGCTTCCACCACCAGTG 58.250 61.111 0.00 0.00 46.83 3.66
3684 3993 2.203337 TGCTTCCACCACCAGTGC 60.203 61.111 0.00 0.00 45.83 4.40
3685 3994 2.985847 GCTTCCACCACCAGTGCC 60.986 66.667 0.00 0.00 45.83 5.01
3686 3995 2.669569 CTTCCACCACCAGTGCCG 60.670 66.667 0.00 0.00 45.83 5.69
3687 3996 4.263572 TTCCACCACCAGTGCCGG 62.264 66.667 0.00 0.00 45.83 6.13
3705 4014 4.821589 CGAAGGCTCCACCGGCTC 62.822 72.222 0.00 0.00 46.52 4.70
3706 4015 4.475135 GAAGGCTCCACCGGCTCC 62.475 72.222 0.00 0.00 46.52 4.70
3710 4019 4.767255 GCTCCACCGGCTCCAGTG 62.767 72.222 0.00 0.00 0.00 3.66
3717 4026 4.767255 CGGCTCCAGTGGGCTCAC 62.767 72.222 9.29 9.29 43.93 3.51
3718 4027 4.416738 GGCTCCAGTGGGCTCACC 62.417 72.222 14.62 0.00 44.64 4.02
3726 4035 3.569210 TGGGCTCACCACCACCAG 61.569 66.667 0.00 0.00 46.80 4.00
3728 4037 4.269523 GGCTCACCACCACCAGCA 62.270 66.667 0.00 0.00 35.26 4.41
3729 4038 2.980233 GCTCACCACCACCAGCAC 60.980 66.667 0.00 0.00 0.00 4.40
3730 4039 2.281761 CTCACCACCACCAGCACC 60.282 66.667 0.00 0.00 0.00 5.01
3731 4040 4.248842 TCACCACCACCAGCACCG 62.249 66.667 0.00 0.00 0.00 4.94
3734 4043 4.579384 CCACCACCAGCACCGGTT 62.579 66.667 2.97 0.00 37.07 4.44
3735 4044 2.428187 CACCACCAGCACCGGTTA 59.572 61.111 2.97 0.00 37.07 2.85
3736 4045 1.228003 CACCACCAGCACCGGTTAA 60.228 57.895 2.97 0.00 37.07 2.01
3737 4046 1.072505 ACCACCAGCACCGGTTAAG 59.927 57.895 2.97 0.00 37.07 1.85
3738 4047 1.674322 CCACCAGCACCGGTTAAGG 60.674 63.158 2.97 9.65 37.07 2.69
3740 4049 0.322322 CACCAGCACCGGTTAAGGTA 59.678 55.000 18.32 0.00 43.89 3.08
3741 4050 0.322648 ACCAGCACCGGTTAAGGTAC 59.677 55.000 17.52 0.00 43.89 3.34
3742 4051 0.611714 CCAGCACCGGTTAAGGTACT 59.388 55.000 2.97 0.00 43.89 2.73
3743 4052 5.683020 CACCAGCACCGGTTAAGGTACTT 62.683 52.174 18.32 0.00 45.51 2.24
3753 4062 3.801620 AGGTACTTCCACCACCCG 58.198 61.111 0.00 0.00 41.40 5.28
3756 4065 1.298667 GTACTTCCACCACCCGCAT 59.701 57.895 0.00 0.00 0.00 4.73
3758 4067 1.195442 TACTTCCACCACCCGCATCA 61.195 55.000 0.00 0.00 0.00 3.07
3795 5095 4.077184 CGGTGCCGGTGAAGCCTA 62.077 66.667 1.90 0.00 35.56 3.93
3797 5097 2.436115 GTGCCGGTGAAGCCTACC 60.436 66.667 1.90 0.00 34.25 3.18
3827 5604 3.170672 AGCTCACCACCACCAGCA 61.171 61.111 0.00 0.00 34.08 4.41
3881 5658 2.745037 GTGCTTCCACCACCGGTA 59.255 61.111 6.87 0.00 35.92 4.02
3882 5659 1.670083 GTGCTTCCACCACCGGTAC 60.670 63.158 6.87 0.00 35.92 3.34
3883 5660 2.046604 GCTTCCACCACCGGTACC 60.047 66.667 6.87 0.16 32.11 3.34
3884 5661 2.263540 CTTCCACCACCGGTACCG 59.736 66.667 27.68 27.68 32.11 4.02
3894 5671 2.183555 CGGTACCGGTGAAGCCTC 59.816 66.667 27.00 0.00 35.56 4.70
3895 5672 2.582978 GGTACCGGTGAAGCCTCC 59.417 66.667 19.93 4.39 34.25 4.30
3896 5673 2.288025 GGTACCGGTGAAGCCTCCA 61.288 63.158 19.93 0.00 34.25 3.86
3897 5674 1.079336 GTACCGGTGAAGCCTCCAC 60.079 63.158 19.93 0.00 34.25 4.02
3908 5685 2.363795 CCTCCACCGGCTCCAGTA 60.364 66.667 0.00 0.00 0.00 2.74
3909 5686 1.987855 CCTCCACCGGCTCCAGTAA 60.988 63.158 0.00 0.00 0.00 2.24
3910 5687 1.517832 CTCCACCGGCTCCAGTAAG 59.482 63.158 0.00 0.00 0.00 2.34
3911 5688 2.125106 CCACCGGCTCCAGTAAGC 60.125 66.667 0.00 0.00 41.73 3.09
3912 5689 2.660064 CCACCGGCTCCAGTAAGCT 61.660 63.158 0.00 0.00 42.13 3.74
3913 5690 1.153549 CACCGGCTCCAGTAAGCTC 60.154 63.158 0.00 0.00 42.13 4.09
3914 5691 1.609501 ACCGGCTCCAGTAAGCTCA 60.610 57.895 0.00 0.00 42.13 4.26
3915 5692 1.153549 CCGGCTCCAGTAAGCTCAC 60.154 63.158 0.00 0.00 42.13 3.51
3916 5693 1.153549 CGGCTCCAGTAAGCTCACC 60.154 63.158 0.00 0.00 42.13 4.02
3917 5694 1.888436 CGGCTCCAGTAAGCTCACCA 61.888 60.000 0.00 0.00 42.13 4.17
3918 5695 0.391793 GGCTCCAGTAAGCTCACCAC 60.392 60.000 0.00 0.00 42.13 4.16
3919 5696 0.391793 GCTCCAGTAAGCTCACCACC 60.392 60.000 0.00 0.00 39.27 4.61
3920 5697 0.976641 CTCCAGTAAGCTCACCACCA 59.023 55.000 0.00 0.00 0.00 4.17
3921 5698 0.685097 TCCAGTAAGCTCACCACCAC 59.315 55.000 0.00 0.00 0.00 4.16
3922 5699 0.321653 CCAGTAAGCTCACCACCACC 60.322 60.000 0.00 0.00 0.00 4.61
3923 5700 0.396435 CAGTAAGCTCACCACCACCA 59.604 55.000 0.00 0.00 0.00 4.17
3924 5701 1.136828 AGTAAGCTCACCACCACCAA 58.863 50.000 0.00 0.00 0.00 3.67
3925 5702 1.202770 AGTAAGCTCACCACCACCAAC 60.203 52.381 0.00 0.00 0.00 3.77
3926 5703 0.840617 TAAGCTCACCACCACCAACA 59.159 50.000 0.00 0.00 0.00 3.33
3927 5704 0.751643 AAGCTCACCACCACCAACAC 60.752 55.000 0.00 0.00 0.00 3.32
3928 5705 2.193536 GCTCACCACCACCAACACC 61.194 63.158 0.00 0.00 0.00 4.16
3929 5706 1.891919 CTCACCACCACCAACACCG 60.892 63.158 0.00 0.00 0.00 4.94
3930 5707 2.904866 CACCACCACCAACACCGG 60.905 66.667 0.00 0.00 0.00 5.28
3931 5708 3.413300 ACCACCACCAACACCGGT 61.413 61.111 0.00 0.00 41.07 5.28
4258 6035 2.828868 GTGAGCTCACCACCACCA 59.171 61.111 32.55 0.00 40.85 4.17
4259 6036 1.148273 GTGAGCTCACCACCACCAA 59.852 57.895 32.55 0.00 40.85 3.67
4260 6037 1.148273 TGAGCTCACCACCACCAAC 59.852 57.895 13.74 0.00 0.00 3.77
4261 6038 1.961277 GAGCTCACCACCACCAACG 60.961 63.158 9.40 0.00 0.00 4.10
4262 6039 3.660111 GCTCACCACCACCAACGC 61.660 66.667 0.00 0.00 0.00 4.84
4263 6040 2.978010 CTCACCACCACCAACGCC 60.978 66.667 0.00 0.00 0.00 5.68
4264 6041 3.765894 CTCACCACCACCAACGCCA 62.766 63.158 0.00 0.00 0.00 5.69
4265 6042 3.286751 CACCACCACCAACGCCAG 61.287 66.667 0.00 0.00 0.00 4.85
4266 6043 3.804329 ACCACCACCAACGCCAGT 61.804 61.111 0.00 0.00 0.00 4.00
4267 6044 2.518349 CCACCACCAACGCCAGTT 60.518 61.111 0.00 0.00 42.15 3.16
4268 6045 1.228003 CCACCACCAACGCCAGTTA 60.228 57.895 0.00 0.00 38.79 2.24
4269 6046 0.820074 CCACCACCAACGCCAGTTAA 60.820 55.000 0.00 0.00 38.79 2.01
4270 6047 0.591170 CACCACCAACGCCAGTTAAG 59.409 55.000 0.00 0.00 38.79 1.85
4271 6048 0.536460 ACCACCAACGCCAGTTAAGG 60.536 55.000 0.00 0.00 38.79 2.69
4272 6049 0.536460 CCACCAACGCCAGTTAAGGT 60.536 55.000 0.00 0.00 38.79 3.50
4273 6050 1.270947 CCACCAACGCCAGTTAAGGTA 60.271 52.381 0.00 0.00 38.79 3.08
4274 6051 1.802365 CACCAACGCCAGTTAAGGTAC 59.198 52.381 0.00 0.00 38.79 3.34
4275 6052 1.695788 ACCAACGCCAGTTAAGGTACT 59.304 47.619 0.00 0.00 38.71 2.73
4286 6063 3.801620 AGGTACTTCCACCACCCG 58.198 61.111 0.00 0.00 41.40 5.28
4287 6064 2.046604 GGTACTTCCACCACCCGC 60.047 66.667 0.00 0.00 38.55 6.13
4288 6065 2.745037 GTACTTCCACCACCCGCA 59.255 61.111 0.00 0.00 0.00 5.69
4289 6066 1.670083 GTACTTCCACCACCCGCAC 60.670 63.158 0.00 0.00 0.00 5.34
4290 6067 2.141448 TACTTCCACCACCCGCACA 61.141 57.895 0.00 0.00 0.00 4.57
4291 6068 1.697082 TACTTCCACCACCCGCACAA 61.697 55.000 0.00 0.00 0.00 3.33
4292 6069 2.203280 TTCCACCACCCGCACAAG 60.203 61.111 0.00 0.00 0.00 3.16
4293 6070 2.674563 CTTCCACCACCCGCACAAGA 62.675 60.000 0.00 0.00 0.00 3.02
4294 6071 2.669569 CCACCACCCGCACAAGAG 60.670 66.667 0.00 0.00 0.00 2.85
4295 6072 2.425592 CACCACCCGCACAAGAGA 59.574 61.111 0.00 0.00 0.00 3.10
4296 6073 1.227823 CACCACCCGCACAAGAGAA 60.228 57.895 0.00 0.00 0.00 2.87
4297 6074 1.071471 ACCACCCGCACAAGAGAAG 59.929 57.895 0.00 0.00 0.00 2.85
4298 6075 1.672356 CCACCCGCACAAGAGAAGG 60.672 63.158 0.00 0.00 0.00 3.46
4299 6076 1.071471 CACCCGCACAAGAGAAGGT 59.929 57.895 0.00 0.00 0.00 3.50
4300 6077 1.071471 ACCCGCACAAGAGAAGGTG 59.929 57.895 0.00 0.00 38.05 4.00
4306 6083 2.260844 CACAAGAGAAGGTGCTTCCA 57.739 50.000 0.00 0.00 40.98 3.53
4307 6084 1.876156 CACAAGAGAAGGTGCTTCCAC 59.124 52.381 0.00 0.00 40.98 4.02
4381 6158 0.404040 TGAAATCTCCACCACCACCC 59.596 55.000 0.00 0.00 0.00 4.61
4399 6176 2.579201 GCTCCAGTTAGCTCGCCA 59.421 61.111 0.00 0.00 39.50 5.69
4492 6314 4.530857 CCCGCCCCAGTTAGCTCG 62.531 72.222 0.00 0.00 0.00 5.03
4498 6320 4.451150 CCAGTTAGCTCGCCGCCA 62.451 66.667 0.00 0.00 40.39 5.69
4878 6713 6.583912 AATTATGTGTATGTCTGTGCGTAC 57.416 37.500 0.00 0.00 0.00 3.67
4901 6736 1.654105 GCGACGGTGAAGTGTATGAAG 59.346 52.381 0.00 0.00 0.00 3.02
5102 6961 9.533831 AAATGGTGTTTTGGTTTATCTATCTCT 57.466 29.630 0.00 0.00 0.00 3.10
5103 6962 8.738645 ATGGTGTTTTGGTTTATCTATCTCTC 57.261 34.615 0.00 0.00 0.00 3.20
5104 6963 7.918076 TGGTGTTTTGGTTTATCTATCTCTCT 58.082 34.615 0.00 0.00 0.00 3.10
5105 6964 9.042450 TGGTGTTTTGGTTTATCTATCTCTCTA 57.958 33.333 0.00 0.00 0.00 2.43
5153 7016 3.815401 ACAAAACGAGGTTCTTCTCATGG 59.185 43.478 0.00 0.00 33.59 3.66
5160 7023 0.798776 GTTCTTCTCATGGCACCACG 59.201 55.000 0.00 0.00 0.00 4.94
5172 7035 0.796312 GCACCACGTCGATTCACATT 59.204 50.000 0.00 0.00 0.00 2.71
5176 7039 3.245284 CACCACGTCGATTCACATTATCC 59.755 47.826 0.00 0.00 0.00 2.59
5186 7049 8.064222 GTCGATTCACATTATCCACATTACTTG 58.936 37.037 0.00 0.00 0.00 3.16
5236 7099 7.989826 AGCAATGATTTAACAAGCTAACTAGG 58.010 34.615 0.00 0.00 34.95 3.02
5237 7100 7.829211 AGCAATGATTTAACAAGCTAACTAGGA 59.171 33.333 0.00 0.00 34.95 2.94
5238 7101 8.624776 GCAATGATTTAACAAGCTAACTAGGAT 58.375 33.333 0.00 0.00 0.00 3.24
5241 7104 9.905713 ATGATTTAACAAGCTAACTAGGATTCA 57.094 29.630 0.00 0.00 0.00 2.57
5242 7105 9.905713 TGATTTAACAAGCTAACTAGGATTCAT 57.094 29.630 0.00 0.00 0.00 2.57
5281 7144 7.133891 GTTATGTTTGACAGAACTAGCATGT 57.866 36.000 10.38 0.00 44.37 3.21
5282 7145 7.584987 GTTATGTTTGACAGAACTAGCATGTT 58.415 34.615 10.38 0.00 44.37 2.71
5283 7146 8.717821 GTTATGTTTGACAGAACTAGCATGTTA 58.282 33.333 10.38 0.00 44.37 2.41
5284 7147 7.928307 ATGTTTGACAGAACTAGCATGTTAT 57.072 32.000 0.00 0.00 0.00 1.89
5285 7148 7.132694 TGTTTGACAGAACTAGCATGTTATG 57.867 36.000 12.67 12.67 42.67 1.90
5302 7165 7.682741 GCATGTTATGTTTGATGGAACTAGCAT 60.683 37.037 0.00 0.00 0.00 3.79
5303 7166 8.839343 CATGTTATGTTTGATGGAACTAGCATA 58.161 33.333 0.00 0.00 0.00 3.14
5343 7206 6.489700 TGTGAAGGTGTCATGTTCAATGTATT 59.510 34.615 0.00 0.00 38.90 1.89
5519 7382 6.575267 TGAATATTTCCATGCCATGTTCAAG 58.425 36.000 3.63 0.00 28.49 3.02
5561 7424 7.040132 TGACAATATGTGCCTTTGTTTATGTGA 60.040 33.333 0.00 0.00 33.92 3.58
5569 7432 9.407380 TGTGCCTTTGTTTATGTGATATTAGAT 57.593 29.630 0.00 0.00 0.00 1.98
5582 7445 6.825213 TGTGATATTAGATTGCAAGCTTGTCT 59.175 34.615 24.00 22.17 0.00 3.41
5583 7446 7.986889 TGTGATATTAGATTGCAAGCTTGTCTA 59.013 33.333 24.00 21.21 0.00 2.59
5592 7455 8.186821 AGATTGCAAGCTTGTCTATAATTTGTC 58.813 33.333 26.55 6.62 0.00 3.18
5593 7456 7.452880 TTGCAAGCTTGTCTATAATTTGTCT 57.547 32.000 26.55 0.00 0.00 3.41
5604 7467 9.083080 TGTCTATAATTTGTCTGTGATGTAACG 57.917 33.333 0.00 0.00 0.00 3.18
5618 7481 8.692110 TGTGATGTAACGTTAATACTCGAAAT 57.308 30.769 10.11 0.00 0.00 2.17
5619 7482 8.588789 TGTGATGTAACGTTAATACTCGAAATG 58.411 33.333 10.11 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
110 111 4.147321 ACTTGTCAACTTCTTCCATGCAT 58.853 39.130 0.00 0.00 0.00 3.96
382 411 8.157476 ACCATGAAACCTTATCACATATACTCC 58.843 37.037 0.00 0.00 0.00 3.85
383 412 9.561069 AACCATGAAACCTTATCACATATACTC 57.439 33.333 0.00 0.00 0.00 2.59
430 459 8.710835 AAATTACGAATTTTCAAACTTGGTGT 57.289 26.923 0.00 0.00 37.84 4.16
466 496 4.067913 GTGGGCCGGCCATGTTTG 62.068 66.667 44.46 0.00 37.98 2.93
481 513 2.681848 GCCTCAAGACAGGATCAATGTG 59.318 50.000 7.47 0.00 35.20 3.21
508 540 7.832187 TCAGTCTGAATATTTTAATTCCCGGTT 59.168 33.333 0.00 0.00 35.40 4.44
559 598 2.238521 GGGTGATTTGGCTGTCTTTGA 58.761 47.619 0.00 0.00 0.00 2.69
560 599 1.273327 GGGGTGATTTGGCTGTCTTTG 59.727 52.381 0.00 0.00 0.00 2.77
561 600 1.133199 TGGGGTGATTTGGCTGTCTTT 60.133 47.619 0.00 0.00 0.00 2.52
562 601 0.482446 TGGGGTGATTTGGCTGTCTT 59.518 50.000 0.00 0.00 0.00 3.01
563 602 0.706433 ATGGGGTGATTTGGCTGTCT 59.294 50.000 0.00 0.00 0.00 3.41
564 603 2.024414 GTATGGGGTGATTTGGCTGTC 58.976 52.381 0.00 0.00 0.00 3.51
566 605 1.024271 CGTATGGGGTGATTTGGCTG 58.976 55.000 0.00 0.00 0.00 4.85
568 607 2.335316 TACGTATGGGGTGATTTGGC 57.665 50.000 0.00 0.00 0.00 4.52
569 608 3.211045 CCTTACGTATGGGGTGATTTGG 58.789 50.000 17.65 0.00 0.00 3.28
570 609 3.881220 ACCTTACGTATGGGGTGATTTG 58.119 45.455 26.16 3.91 0.00 2.32
571 610 4.441913 CGTACCTTACGTATGGGGTGATTT 60.442 45.833 26.16 10.12 46.41 2.17
573 612 2.624838 CGTACCTTACGTATGGGGTGAT 59.375 50.000 26.16 11.32 46.41 3.06
574 613 2.023673 CGTACCTTACGTATGGGGTGA 58.976 52.381 26.16 9.97 46.41 4.02
575 614 2.497107 CGTACCTTACGTATGGGGTG 57.503 55.000 26.16 14.00 46.41 4.61
589 628 6.763303 TCTACGAAAAGGTTTTTACGTACC 57.237 37.500 0.00 0.00 34.13 3.34
591 630 7.945033 ACATCTACGAAAAGGTTTTTACGTA 57.055 32.000 0.00 0.00 34.13 3.57
608 647 2.543238 GCCCAGTGCTACGTACATCTAC 60.543 54.545 0.00 0.00 36.87 2.59
609 648 1.679680 GCCCAGTGCTACGTACATCTA 59.320 52.381 0.00 0.00 36.87 1.98
610 649 0.460311 GCCCAGTGCTACGTACATCT 59.540 55.000 0.00 0.00 36.87 2.90
611 650 0.529992 GGCCCAGTGCTACGTACATC 60.530 60.000 0.00 0.00 40.92 3.06
612 651 0.976073 AGGCCCAGTGCTACGTACAT 60.976 55.000 0.00 0.00 40.92 2.29
613 652 1.608336 AGGCCCAGTGCTACGTACA 60.608 57.895 0.00 0.00 40.92 2.90
614 653 1.153628 CAGGCCCAGTGCTACGTAC 60.154 63.158 0.00 0.00 40.92 3.67
615 654 1.304630 TCAGGCCCAGTGCTACGTA 60.305 57.895 0.00 0.00 40.92 3.57
616 655 2.603473 TCAGGCCCAGTGCTACGT 60.603 61.111 0.00 0.00 40.92 3.57
617 656 2.185350 CTCAGGCCCAGTGCTACG 59.815 66.667 0.00 0.00 40.92 3.51
618 657 2.586792 CCTCAGGCCCAGTGCTAC 59.413 66.667 0.00 0.00 40.92 3.58
619 658 3.402681 GCCTCAGGCCCAGTGCTA 61.403 66.667 3.37 0.00 44.06 3.49
669 711 4.075910 CTTGCATGCGACGCACGT 62.076 61.111 27.06 7.53 43.04 4.49
675 717 1.154150 GCTGTTCCTTGCATGCGAC 60.154 57.895 14.09 7.07 0.00 5.19
692 734 1.425428 CTTCTTCCATGGCGTTCGC 59.575 57.895 6.96 8.75 0.00 4.70
693 735 0.391130 TCCTTCTTCCATGGCGTTCG 60.391 55.000 6.96 0.00 0.00 3.95
708 750 2.376518 TGGATGCTTGAGTTCCTTCCTT 59.623 45.455 0.00 0.00 0.00 3.36
709 751 1.988107 TGGATGCTTGAGTTCCTTCCT 59.012 47.619 0.00 0.00 0.00 3.36
710 752 2.087646 GTGGATGCTTGAGTTCCTTCC 58.912 52.381 0.00 0.00 0.00 3.46
711 753 1.734465 CGTGGATGCTTGAGTTCCTTC 59.266 52.381 0.00 0.00 0.00 3.46
712 754 1.813513 CGTGGATGCTTGAGTTCCTT 58.186 50.000 0.00 0.00 0.00 3.36
713 755 0.674895 GCGTGGATGCTTGAGTTCCT 60.675 55.000 0.00 0.00 0.00 3.36
714 756 1.796796 GCGTGGATGCTTGAGTTCC 59.203 57.895 0.00 0.00 0.00 3.62
755 805 0.463833 AGCCCCGGATCGACAATTTC 60.464 55.000 0.73 0.00 0.00 2.17
831 881 2.203209 GGGCTATGCGGGTTCAGG 60.203 66.667 0.00 0.00 0.00 3.86
833 883 2.742116 GGAGGGCTATGCGGGTTCA 61.742 63.158 0.00 0.00 0.00 3.18
842 892 2.311688 CTTTCGCGGTGGAGGGCTAT 62.312 60.000 6.13 0.00 0.00 2.97
869 919 1.071987 GATGCAGATGGATGGCCGA 59.928 57.895 0.00 0.00 36.79 5.54
875 925 1.662760 CGCGTCGATGCAGATGGAT 60.663 57.895 27.92 0.00 34.15 3.41
876 926 2.278792 CGCGTCGATGCAGATGGA 60.279 61.111 27.92 0.00 34.15 3.41
882 932 4.829518 CTCGGTCGCGTCGATGCA 62.830 66.667 27.92 13.24 38.42 3.96
884 934 3.391160 TTCCTCGGTCGCGTCGATG 62.391 63.158 22.17 19.69 38.42 3.84
924 978 5.570344 CGTTCTCGCGATATATAGGAACAT 58.430 41.667 25.12 0.00 33.50 2.71
1237 1291 1.080025 GGTCGTTCGGGAAGGTCAG 60.080 63.158 1.59 0.00 0.00 3.51
2010 2067 3.690280 TGCACGATGCCGGTGAGA 61.690 61.111 1.90 0.00 44.23 3.27
2433 2496 3.906980 CCAGAACTGGGAGGTGGT 58.093 61.111 12.54 0.00 46.81 4.16
2548 2611 1.064825 ACCACCTTAACTGGTCCCTG 58.935 55.000 0.00 0.00 37.47 4.45
2549 2612 1.829138 AACCACCTTAACTGGTCCCT 58.171 50.000 1.29 0.00 41.45 4.20
2553 2616 1.601166 GCGAAACCACCTTAACTGGT 58.399 50.000 0.00 0.00 44.39 4.00
2571 2634 4.329545 TTCTCTGGTGCGGGTGGC 62.330 66.667 0.00 0.00 43.96 5.01
2577 2640 1.433534 GAAGAACCTTCTCTGGTGCG 58.566 55.000 0.00 0.00 40.60 5.34
2583 2646 1.700186 GGTGGTGGAAGAACCTTCTCT 59.300 52.381 6.66 0.00 41.16 3.10
2596 2659 4.980805 CACGGGTGTCGGTGGTGG 62.981 72.222 0.00 0.00 44.45 4.61
2607 2670 2.430367 GGAAGCACCTTCACGGGT 59.570 61.111 7.22 0.00 41.77 5.28
2682 2745 4.021925 ACCTTCTCTGGTGCGGGC 62.022 66.667 0.00 0.00 39.17 6.13
2745 2970 2.854253 TGGTGGAAGCACCTTCTCT 58.146 52.632 0.00 0.00 40.88 3.10
2820 3048 4.681978 AGCACCTTCACGGGCGTC 62.682 66.667 0.00 0.00 36.97 5.19
2821 3049 4.250305 AAGCACCTTCACGGGCGT 62.250 61.111 0.00 0.00 36.97 5.68
2850 3078 2.997897 GGAGGAGAGTGCACCGGT 60.998 66.667 14.63 0.00 0.00 5.28
3332 3560 1.672356 CTTCTTCGGTGCAGGTGGG 60.672 63.158 0.00 0.00 0.00 4.61
3362 3614 0.958876 GTGGGATCACCGGTGTTTCC 60.959 60.000 33.23 33.23 44.64 3.13
3383 3635 4.441792 GTGGTGGCATTGACTTTTCTTTT 58.558 39.130 0.00 0.00 0.00 2.27
3435 3687 1.066430 TGGTGGTTCATACTTCTCGGC 60.066 52.381 0.00 0.00 0.00 5.54
3546 3855 1.178534 ACTGGTTTTGGCGGTGATGG 61.179 55.000 0.00 0.00 0.00 3.51
3549 3858 0.817634 CTGACTGGTTTTGGCGGTGA 60.818 55.000 0.00 0.00 0.00 4.02
3559 3868 2.031163 GCGGTGAGCTGACTGGTT 59.969 61.111 14.33 0.00 44.04 3.67
3607 3916 1.302033 GGTGGTGGTGAGCTCACTG 60.302 63.158 38.17 0.00 45.73 3.66
3626 3935 1.366679 GAAGTACCTTAACTGGCGCC 58.633 55.000 22.73 22.73 0.00 6.53
3659 3968 2.538790 TGGTGGAAGCACCTTCTCA 58.461 52.632 0.00 0.00 40.88 3.27
3688 3997 4.821589 GAGCCGGTGGAGCCTTCG 62.822 72.222 1.90 0.00 34.25 3.79
3689 3998 4.475135 GGAGCCGGTGGAGCCTTC 62.475 72.222 1.90 0.00 34.25 3.46
3693 4002 4.767255 CACTGGAGCCGGTGGAGC 62.767 72.222 18.67 0.00 46.44 4.70
3700 4009 4.767255 GTGAGCCCACTGGAGCCG 62.767 72.222 0.00 0.00 40.10 5.52
3701 4010 4.416738 GGTGAGCCCACTGGAGCC 62.417 72.222 0.00 0.00 42.77 4.70
3702 4011 3.640407 TGGTGAGCCCACTGGAGC 61.640 66.667 0.00 0.00 42.77 4.70
3709 4018 3.569210 CTGGTGGTGGTGAGCCCA 61.569 66.667 0.00 0.00 42.51 5.36
3711 4020 4.269523 TGCTGGTGGTGGTGAGCC 62.270 66.667 0.00 0.00 0.00 4.70
3712 4021 2.980233 GTGCTGGTGGTGGTGAGC 60.980 66.667 0.00 0.00 0.00 4.26
3713 4022 2.281761 GGTGCTGGTGGTGGTGAG 60.282 66.667 0.00 0.00 0.00 3.51
3714 4023 4.248842 CGGTGCTGGTGGTGGTGA 62.249 66.667 0.00 0.00 0.00 4.02
3717 4026 2.684192 TTAACCGGTGCTGGTGGTGG 62.684 60.000 8.52 0.00 42.89 4.61
3718 4027 1.228003 TTAACCGGTGCTGGTGGTG 60.228 57.895 8.52 0.00 42.89 4.17
3719 4028 1.072505 CTTAACCGGTGCTGGTGGT 59.927 57.895 8.52 0.00 42.89 4.16
3720 4029 1.674322 CCTTAACCGGTGCTGGTGG 60.674 63.158 8.52 0.97 42.89 4.61
3721 4030 0.322322 TACCTTAACCGGTGCTGGTG 59.678 55.000 26.22 10.58 42.89 4.17
3722 4031 0.322648 GTACCTTAACCGGTGCTGGT 59.677 55.000 23.19 23.19 46.67 4.00
3723 4032 0.611714 AGTACCTTAACCGGTGCTGG 59.388 55.000 8.52 13.30 46.36 4.85
3726 4035 1.002315 TGGAAGTACCTTAACCGGTGC 59.998 52.381 8.52 0.00 39.62 5.01
3727 4036 2.613725 GGTGGAAGTACCTTAACCGGTG 60.614 54.545 8.52 0.00 37.93 4.94
3728 4037 1.625315 GGTGGAAGTACCTTAACCGGT 59.375 52.381 0.00 0.00 41.10 5.28
3729 4038 1.624813 TGGTGGAAGTACCTTAACCGG 59.375 52.381 0.00 0.00 41.43 5.28
3730 4039 2.613725 GGTGGTGGAAGTACCTTAACCG 60.614 54.545 0.00 0.00 41.43 4.44
3731 4040 2.290514 GGGTGGTGGAAGTACCTTAACC 60.291 54.545 0.00 0.00 41.43 2.85
3732 4041 2.613725 CGGGTGGTGGAAGTACCTTAAC 60.614 54.545 0.00 0.00 41.43 2.01
3733 4042 1.624813 CGGGTGGTGGAAGTACCTTAA 59.375 52.381 0.00 0.00 41.43 1.85
3734 4043 1.269012 CGGGTGGTGGAAGTACCTTA 58.731 55.000 0.00 0.00 41.43 2.69
3735 4044 2.063774 CGGGTGGTGGAAGTACCTT 58.936 57.895 0.00 0.00 41.43 3.50
3736 4045 2.590114 GCGGGTGGTGGAAGTACCT 61.590 63.158 0.00 0.00 41.43 3.08
3737 4046 2.046604 GCGGGTGGTGGAAGTACC 60.047 66.667 0.00 0.00 41.24 3.34
3738 4047 0.743345 GATGCGGGTGGTGGAAGTAC 60.743 60.000 0.00 0.00 0.00 2.73
3739 4048 1.195442 TGATGCGGGTGGTGGAAGTA 61.195 55.000 0.00 0.00 0.00 2.24
3740 4049 2.351276 GATGCGGGTGGTGGAAGT 59.649 61.111 0.00 0.00 0.00 3.01
3741 4050 1.746615 CTGATGCGGGTGGTGGAAG 60.747 63.158 0.00 0.00 0.00 3.46
3742 4051 2.184020 CTCTGATGCGGGTGGTGGAA 62.184 60.000 0.00 0.00 0.00 3.53
3743 4052 2.606213 TCTGATGCGGGTGGTGGA 60.606 61.111 0.00 0.00 0.00 4.02
3744 4053 2.124983 CTCTGATGCGGGTGGTGG 60.125 66.667 0.00 0.00 0.00 4.61
3745 4054 0.742281 CTTCTCTGATGCGGGTGGTG 60.742 60.000 0.00 0.00 0.00 4.17
3746 4055 1.599047 CTTCTCTGATGCGGGTGGT 59.401 57.895 0.00 0.00 0.00 4.16
3753 4062 1.339438 TGGAAGCACCTTCTCTGATGC 60.339 52.381 5.11 0.00 40.07 3.91
3756 4065 0.687354 GGTGGAAGCACCTTCTCTGA 59.313 55.000 0.00 0.00 41.84 3.27
3758 4067 2.854253 TGGTGGAAGCACCTTCTCT 58.146 52.632 0.00 0.00 40.88 3.10
3827 5604 3.072038 GTGGTGGAAGTACCTTAACTGGT 59.928 47.826 0.00 0.00 41.43 4.00
3879 5656 1.079336 GTGGAGGCTTCACCGGTAC 60.079 63.158 15.40 0.00 46.52 3.34
3880 5657 2.288025 GGTGGAGGCTTCACCGGTA 61.288 63.158 28.60 0.00 44.16 4.02
3881 5658 3.637273 GGTGGAGGCTTCACCGGT 61.637 66.667 28.60 0.00 44.16 5.28
3891 5668 1.961180 CTTACTGGAGCCGGTGGAGG 61.961 65.000 11.22 0.00 36.80 4.30
3892 5669 1.517832 CTTACTGGAGCCGGTGGAG 59.482 63.158 11.22 5.47 36.80 3.86
3893 5670 2.656069 GCTTACTGGAGCCGGTGGA 61.656 63.158 11.22 0.00 36.66 4.02
3894 5671 2.125106 GCTTACTGGAGCCGGTGG 60.125 66.667 11.22 5.31 36.66 4.61
3895 5672 1.153549 GAGCTTACTGGAGCCGGTG 60.154 63.158 11.22 0.00 43.74 4.94
3896 5673 1.609501 TGAGCTTACTGGAGCCGGT 60.610 57.895 1.90 6.22 43.74 5.28
3897 5674 1.153549 GTGAGCTTACTGGAGCCGG 60.154 63.158 0.00 0.00 43.74 6.13
3898 5675 1.153549 GGTGAGCTTACTGGAGCCG 60.154 63.158 8.70 0.00 43.74 5.52
3899 5676 0.391793 GTGGTGAGCTTACTGGAGCC 60.392 60.000 8.70 0.00 43.74 4.70
3900 5677 0.391793 GGTGGTGAGCTTACTGGAGC 60.392 60.000 8.70 0.00 43.02 4.70
3901 5678 0.976641 TGGTGGTGAGCTTACTGGAG 59.023 55.000 8.70 0.00 0.00 3.86
3902 5679 0.685097 GTGGTGGTGAGCTTACTGGA 59.315 55.000 8.70 0.00 0.00 3.86
3903 5680 0.321653 GGTGGTGGTGAGCTTACTGG 60.322 60.000 8.70 0.00 0.00 4.00
3904 5681 0.396435 TGGTGGTGGTGAGCTTACTG 59.604 55.000 8.70 0.00 0.00 2.74
3905 5682 1.136828 TTGGTGGTGGTGAGCTTACT 58.863 50.000 8.70 0.00 0.00 2.24
3906 5683 1.235724 GTTGGTGGTGGTGAGCTTAC 58.764 55.000 0.00 0.00 0.00 2.34
3907 5684 0.840617 TGTTGGTGGTGGTGAGCTTA 59.159 50.000 0.00 0.00 0.00 3.09
3908 5685 0.751643 GTGTTGGTGGTGGTGAGCTT 60.752 55.000 0.00 0.00 0.00 3.74
3909 5686 1.152963 GTGTTGGTGGTGGTGAGCT 60.153 57.895 0.00 0.00 0.00 4.09
3910 5687 2.193536 GGTGTTGGTGGTGGTGAGC 61.194 63.158 0.00 0.00 0.00 4.26
3911 5688 1.891919 CGGTGTTGGTGGTGGTGAG 60.892 63.158 0.00 0.00 0.00 3.51
3912 5689 2.190843 CGGTGTTGGTGGTGGTGA 59.809 61.111 0.00 0.00 0.00 4.02
3913 5690 2.904866 CCGGTGTTGGTGGTGGTG 60.905 66.667 0.00 0.00 0.00 4.17
3914 5691 3.413300 ACCGGTGTTGGTGGTGGT 61.413 61.111 6.12 0.00 41.85 4.16
4236 6013 1.203523 GTGGTGGTGAGCTCACTAGAG 59.796 57.143 38.17 0.00 45.73 2.43
4237 6014 1.257743 GTGGTGGTGAGCTCACTAGA 58.742 55.000 38.17 23.16 45.73 2.43
4238 6015 0.247736 GGTGGTGGTGAGCTCACTAG 59.752 60.000 38.17 0.00 45.73 2.57
4239 6016 0.471022 TGGTGGTGGTGAGCTCACTA 60.471 55.000 38.17 33.08 45.73 2.74
4240 6017 1.344953 TTGGTGGTGGTGAGCTCACT 61.345 55.000 38.17 0.00 45.73 3.41
4241 6018 1.148273 TTGGTGGTGGTGAGCTCAC 59.852 57.895 34.25 34.25 45.72 3.51
4242 6019 1.148273 GTTGGTGGTGGTGAGCTCA 59.852 57.895 13.74 13.74 0.00 4.26
4243 6020 1.961277 CGTTGGTGGTGGTGAGCTC 60.961 63.158 6.82 6.82 0.00 4.09
4244 6021 2.111043 CGTTGGTGGTGGTGAGCT 59.889 61.111 0.00 0.00 0.00 4.09
4245 6022 3.660111 GCGTTGGTGGTGGTGAGC 61.660 66.667 0.00 0.00 0.00 4.26
4246 6023 2.978010 GGCGTTGGTGGTGGTGAG 60.978 66.667 0.00 0.00 0.00 3.51
4247 6024 3.765894 CTGGCGTTGGTGGTGGTGA 62.766 63.158 0.00 0.00 0.00 4.02
4248 6025 3.286751 CTGGCGTTGGTGGTGGTG 61.287 66.667 0.00 0.00 0.00 4.17
4249 6026 1.985460 TAACTGGCGTTGGTGGTGGT 61.985 55.000 5.24 0.00 34.59 4.16
4250 6027 0.820074 TTAACTGGCGTTGGTGGTGG 60.820 55.000 5.24 0.00 34.59 4.61
4251 6028 0.591170 CTTAACTGGCGTTGGTGGTG 59.409 55.000 5.24 0.00 34.59 4.17
4252 6029 0.536460 CCTTAACTGGCGTTGGTGGT 60.536 55.000 5.24 0.00 34.59 4.16
4253 6030 0.536460 ACCTTAACTGGCGTTGGTGG 60.536 55.000 5.24 6.67 30.65 4.61
4254 6031 1.802365 GTACCTTAACTGGCGTTGGTG 59.198 52.381 11.58 2.17 33.14 4.17
4255 6032 1.695788 AGTACCTTAACTGGCGTTGGT 59.304 47.619 5.24 7.05 34.74 3.67
4256 6033 2.467566 AGTACCTTAACTGGCGTTGG 57.532 50.000 5.24 2.28 34.59 3.77
4257 6034 2.740447 GGAAGTACCTTAACTGGCGTTG 59.260 50.000 5.24 0.00 33.61 4.10
4258 6035 2.369532 TGGAAGTACCTTAACTGGCGTT 59.630 45.455 0.00 0.87 39.86 4.84
4259 6036 1.972795 TGGAAGTACCTTAACTGGCGT 59.027 47.619 0.00 0.00 39.86 5.68
4260 6037 2.344025 GTGGAAGTACCTTAACTGGCG 58.656 52.381 0.00 0.00 39.86 5.69
4261 6038 2.039348 TGGTGGAAGTACCTTAACTGGC 59.961 50.000 0.00 0.00 41.43 4.85
4262 6039 3.558533 GGTGGTGGAAGTACCTTAACTGG 60.559 52.174 0.00 0.00 41.43 4.00
4263 6040 3.558533 GGGTGGTGGAAGTACCTTAACTG 60.559 52.174 0.00 0.00 41.43 3.16
4264 6041 2.641321 GGGTGGTGGAAGTACCTTAACT 59.359 50.000 0.00 0.00 41.43 2.24
4265 6042 2.613725 CGGGTGGTGGAAGTACCTTAAC 60.614 54.545 0.00 0.00 41.43 2.01
4266 6043 1.624813 CGGGTGGTGGAAGTACCTTAA 59.375 52.381 0.00 0.00 41.43 1.85
4267 6044 1.269012 CGGGTGGTGGAAGTACCTTA 58.731 55.000 0.00 0.00 41.43 2.69
4268 6045 2.063774 CGGGTGGTGGAAGTACCTT 58.936 57.895 0.00 0.00 41.43 3.50
4269 6046 2.590114 GCGGGTGGTGGAAGTACCT 61.590 63.158 0.00 0.00 41.43 3.08
4270 6047 2.046604 GCGGGTGGTGGAAGTACC 60.047 66.667 0.00 0.00 41.24 3.34
4271 6048 1.670083 GTGCGGGTGGTGGAAGTAC 60.670 63.158 0.00 0.00 0.00 2.73
4272 6049 1.697082 TTGTGCGGGTGGTGGAAGTA 61.697 55.000 0.00 0.00 0.00 2.24
4273 6050 2.958578 CTTGTGCGGGTGGTGGAAGT 62.959 60.000 0.00 0.00 0.00 3.01
4274 6051 2.203280 TTGTGCGGGTGGTGGAAG 60.203 61.111 0.00 0.00 0.00 3.46
4275 6052 2.203280 CTTGTGCGGGTGGTGGAA 60.203 61.111 0.00 0.00 0.00 3.53
4276 6053 3.164977 TCTTGTGCGGGTGGTGGA 61.165 61.111 0.00 0.00 0.00 4.02
4277 6054 2.669569 CTCTTGTGCGGGTGGTGG 60.670 66.667 0.00 0.00 0.00 4.61
4278 6055 1.227823 TTCTCTTGTGCGGGTGGTG 60.228 57.895 0.00 0.00 0.00 4.17
4279 6056 1.071471 CTTCTCTTGTGCGGGTGGT 59.929 57.895 0.00 0.00 0.00 4.16
4280 6057 1.672356 CCTTCTCTTGTGCGGGTGG 60.672 63.158 0.00 0.00 0.00 4.61
4281 6058 1.071471 ACCTTCTCTTGTGCGGGTG 59.929 57.895 0.00 0.00 0.00 4.61
4282 6059 1.071471 CACCTTCTCTTGTGCGGGT 59.929 57.895 0.00 0.00 0.00 5.28
4283 6060 3.972227 CACCTTCTCTTGTGCGGG 58.028 61.111 0.00 0.00 0.00 6.13
4287 6064 1.876156 GTGGAAGCACCTTCTCTTGTG 59.124 52.381 5.11 0.00 40.07 3.33
4288 6065 1.202818 GGTGGAAGCACCTTCTCTTGT 60.203 52.381 0.00 0.00 41.84 3.16
4289 6066 1.202806 TGGTGGAAGCACCTTCTCTTG 60.203 52.381 0.00 0.00 40.88 3.02
4290 6067 1.140312 TGGTGGAAGCACCTTCTCTT 58.860 50.000 0.00 0.00 40.88 2.85
4291 6068 2.854253 TGGTGGAAGCACCTTCTCT 58.146 52.632 0.00 0.00 40.88 3.10
4299 6076 2.203337 GTGCTGGTGGTGGAAGCA 60.203 61.111 0.00 0.00 45.41 3.91
4300 6077 2.985847 GGTGCTGGTGGTGGAAGC 60.986 66.667 0.00 0.00 37.46 3.86
4301 6078 2.669569 CGGTGCTGGTGGTGGAAG 60.670 66.667 0.00 0.00 0.00 3.46
4302 6079 4.263572 CCGGTGCTGGTGGTGGAA 62.264 66.667 0.00 0.00 0.00 3.53
4309 6086 4.643387 GGCTTCACCGGTGCTGGT 62.643 66.667 30.25 0.00 45.21 4.00
4310 6087 4.335647 AGGCTTCACCGGTGCTGG 62.336 66.667 30.25 20.79 46.52 4.85
4311 6088 2.743928 GAGGCTTCACCGGTGCTG 60.744 66.667 30.25 23.32 46.52 4.41
4312 6089 4.021925 GGAGGCTTCACCGGTGCT 62.022 66.667 30.25 20.43 46.52 4.40
4351 6128 0.548510 GAGATTTCACAGGGGGAGGG 59.451 60.000 0.00 0.00 0.00 4.30
4399 6176 1.343069 GAGACTTGACTGGAGGTGGT 58.657 55.000 0.00 0.00 0.00 4.16
4492 6314 4.329545 TTGACTGGAGGTGGCGGC 62.330 66.667 0.00 0.00 0.00 6.53
4498 6320 1.551329 GGAGGAGACTTGACTGGAGGT 60.551 57.143 0.00 0.00 44.43 3.85
4774 6596 1.442520 GCATGTGCACGCGATGTTT 60.443 52.632 15.93 0.00 41.59 2.83
4878 6713 0.731514 ATACACTTCACCGTCGCACG 60.732 55.000 2.27 2.27 42.11 5.34
4888 6723 5.817296 GGCATCATACACTTCATACACTTCA 59.183 40.000 0.00 0.00 0.00 3.02
4889 6724 6.051717 AGGCATCATACACTTCATACACTTC 58.948 40.000 0.00 0.00 0.00 3.01
4924 6775 7.041107 TGATGCTTTAATAAAATTGCCCACTC 58.959 34.615 0.00 0.00 0.00 3.51
5112 6971 9.079833 CGTTTTGTCCTTTTTCGTAGATAGATA 57.920 33.333 0.00 0.00 35.04 1.98
5123 6986 5.244785 AGAACCTCGTTTTGTCCTTTTTC 57.755 39.130 0.00 0.00 0.00 2.29
5135 6998 1.347707 TGCCATGAGAAGAACCTCGTT 59.652 47.619 0.00 0.00 35.99 3.85
5153 7016 0.796312 AATGTGAATCGACGTGGTGC 59.204 50.000 0.00 0.00 0.00 5.01
5160 7023 7.715265 AGTAATGTGGATAATGTGAATCGAC 57.285 36.000 0.00 0.00 33.96 4.20
5210 7073 9.109393 CCTAGTTAGCTTGTTAAATCATTGCTA 57.891 33.333 0.00 0.00 32.82 3.49
5211 7074 7.829211 TCCTAGTTAGCTTGTTAAATCATTGCT 59.171 33.333 0.00 0.00 34.16 3.91
5212 7075 7.985476 TCCTAGTTAGCTTGTTAAATCATTGC 58.015 34.615 0.00 0.00 0.00 3.56
5215 7078 9.905713 TGAATCCTAGTTAGCTTGTTAAATCAT 57.094 29.630 0.00 0.00 0.00 2.45
5216 7079 9.905713 ATGAATCCTAGTTAGCTTGTTAAATCA 57.094 29.630 0.00 0.00 0.00 2.57
5251 7114 9.582431 GCTAGTTCTGTCAAACATAACTACATA 57.418 33.333 11.70 0.00 41.69 2.29
5252 7115 8.094548 TGCTAGTTCTGTCAAACATAACTACAT 58.905 33.333 11.70 0.00 41.69 2.29
5253 7116 7.438564 TGCTAGTTCTGTCAAACATAACTACA 58.561 34.615 11.70 11.71 41.69 2.74
5254 7117 7.884816 TGCTAGTTCTGTCAAACATAACTAC 57.115 36.000 11.70 10.10 41.69 2.73
5255 7118 8.094548 ACATGCTAGTTCTGTCAAACATAACTA 58.905 33.333 13.87 13.87 41.69 2.24
5256 7119 6.936900 ACATGCTAGTTCTGTCAAACATAACT 59.063 34.615 13.25 13.25 44.35 2.24
5257 7120 7.133891 ACATGCTAGTTCTGTCAAACATAAC 57.866 36.000 0.00 1.38 36.00 1.89
5258 7121 7.744087 AACATGCTAGTTCTGTCAAACATAA 57.256 32.000 0.00 0.00 0.00 1.90
5259 7122 8.882736 CATAACATGCTAGTTCTGTCAAACATA 58.117 33.333 0.00 0.00 33.07 2.29
5260 7123 7.391554 ACATAACATGCTAGTTCTGTCAAACAT 59.608 33.333 0.00 0.00 34.87 2.71
5261 7124 6.710295 ACATAACATGCTAGTTCTGTCAAACA 59.290 34.615 0.00 0.00 34.87 2.83
5262 7125 7.133891 ACATAACATGCTAGTTCTGTCAAAC 57.866 36.000 0.00 0.00 34.87 2.93
5263 7126 7.744087 AACATAACATGCTAGTTCTGTCAAA 57.256 32.000 11.22 0.00 37.69 2.69
5264 7127 7.443879 TCAAACATAACATGCTAGTTCTGTCAA 59.556 33.333 11.22 1.86 37.69 3.18
5265 7128 6.934083 TCAAACATAACATGCTAGTTCTGTCA 59.066 34.615 11.22 0.91 37.69 3.58
5266 7129 7.364522 TCAAACATAACATGCTAGTTCTGTC 57.635 36.000 11.22 0.00 37.69 3.51
5267 7130 7.148188 CCATCAAACATAACATGCTAGTTCTGT 60.148 37.037 0.00 6.92 39.54 3.41
5268 7131 7.066163 TCCATCAAACATAACATGCTAGTTCTG 59.934 37.037 0.00 2.48 33.38 3.02
5269 7132 7.112122 TCCATCAAACATAACATGCTAGTTCT 58.888 34.615 0.00 0.00 33.07 3.01
5270 7133 7.320443 TCCATCAAACATAACATGCTAGTTC 57.680 36.000 0.00 0.00 33.07 3.01
5271 7134 7.394359 AGTTCCATCAAACATAACATGCTAGTT 59.606 33.333 0.00 0.34 35.55 2.24
5272 7135 6.886459 AGTTCCATCAAACATAACATGCTAGT 59.114 34.615 0.00 0.00 0.00 2.57
5273 7136 7.325660 AGTTCCATCAAACATAACATGCTAG 57.674 36.000 0.00 0.00 0.00 3.42
5274 7137 7.012327 GCTAGTTCCATCAAACATAACATGCTA 59.988 37.037 0.00 0.00 0.00 3.49
5275 7138 6.183360 GCTAGTTCCATCAAACATAACATGCT 60.183 38.462 0.00 0.00 0.00 3.79
5276 7139 5.973565 GCTAGTTCCATCAAACATAACATGC 59.026 40.000 0.00 0.00 0.00 4.06
5277 7140 7.087409 TGCTAGTTCCATCAAACATAACATG 57.913 36.000 0.00 0.00 0.00 3.21
5278 7141 7.886629 ATGCTAGTTCCATCAAACATAACAT 57.113 32.000 0.00 0.00 0.00 2.71
5279 7142 8.046708 ACTATGCTAGTTCCATCAAACATAACA 58.953 33.333 0.00 0.00 34.86 2.41
5280 7143 8.338259 CACTATGCTAGTTCCATCAAACATAAC 58.662 37.037 0.00 0.00 36.76 1.89
5281 7144 7.498900 CCACTATGCTAGTTCCATCAAACATAA 59.501 37.037 0.00 0.00 36.76 1.90
5282 7145 6.992123 CCACTATGCTAGTTCCATCAAACATA 59.008 38.462 0.00 0.00 36.76 2.29
5283 7146 5.824624 CCACTATGCTAGTTCCATCAAACAT 59.175 40.000 0.00 0.00 36.76 2.71
5284 7147 5.185454 CCACTATGCTAGTTCCATCAAACA 58.815 41.667 0.00 0.00 36.76 2.83
5285 7148 5.186198 ACCACTATGCTAGTTCCATCAAAC 58.814 41.667 0.00 0.00 36.76 2.93
5286 7149 5.428253 GACCACTATGCTAGTTCCATCAAA 58.572 41.667 0.00 0.00 36.76 2.69
5287 7150 4.141711 GGACCACTATGCTAGTTCCATCAA 60.142 45.833 0.00 0.00 36.27 2.57
5288 7151 3.388024 GGACCACTATGCTAGTTCCATCA 59.612 47.826 0.00 0.00 36.27 3.07
5289 7152 3.643792 AGGACCACTATGCTAGTTCCATC 59.356 47.826 12.62 2.98 37.90 3.51
5302 7165 3.683885 ACATCGGTGAGGACCACTA 57.316 52.632 0.65 0.00 43.33 2.74
5303 7166 4.541213 ACATCGGTGAGGACCACT 57.459 55.556 0.65 0.00 43.33 4.00
5313 7176 1.347707 ACATGACACCTTCACATCGGT 59.652 47.619 0.00 0.00 36.92 4.69
5371 7234 8.825667 ACCGCAAAATAAAAATGACTACAAAT 57.174 26.923 0.00 0.00 0.00 2.32
5487 7350 6.871844 TGGCATGGAAATATTCATCGAAAAA 58.128 32.000 0.00 0.00 0.00 1.94
5491 7354 5.072055 ACATGGCATGGAAATATTCATCGA 58.928 37.500 29.49 0.00 33.60 3.59
5492 7355 5.381174 ACATGGCATGGAAATATTCATCG 57.619 39.130 29.49 1.38 33.60 3.84
5493 7356 6.751157 TGAACATGGCATGGAAATATTCATC 58.249 36.000 29.49 12.28 33.60 2.92
5503 7366 2.307496 AACCTTGAACATGGCATGGA 57.693 45.000 29.49 11.71 35.29 3.41
5569 7432 7.040478 ACAGACAAATTATAGACAAGCTTGCAA 60.040 33.333 26.27 12.11 0.00 4.08
5570 7433 6.430925 ACAGACAAATTATAGACAAGCTTGCA 59.569 34.615 26.27 12.14 0.00 4.08
5592 7455 7.730067 TTCGAGTATTAACGTTACATCACAG 57.270 36.000 7.70 3.12 0.00 3.66
5593 7456 8.588789 CATTTCGAGTATTAACGTTACATCACA 58.411 33.333 7.70 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.