Multiple sequence alignment - TraesCS1D01G005600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G005600 chr1D 100.000 3119 0 0 1 3119 2518788 2515670 0.000000e+00 5760
1 TraesCS1D01G005600 chrUn 83.834 2097 274 20 998 3057 70996800 70994732 0.000000e+00 1934
2 TraesCS1D01G005600 chrUn 79.567 1385 241 26 1001 2357 29874627 29875997 0.000000e+00 952
3 TraesCS1D01G005600 chrUn 78.740 1397 242 36 1001 2352 29859601 29860987 0.000000e+00 883
4 TraesCS1D01G005600 chrUn 85.156 896 91 13 2180 3058 322508459 322509329 0.000000e+00 880
5 TraesCS1D01G005600 chrUn 78.492 358 65 8 2712 3059 29876299 29876654 1.130000e-54 224
6 TraesCS1D01G005600 chr1B 88.278 1510 121 20 704 2175 2929189 2930680 0.000000e+00 1757
7 TraesCS1D01G005600 chr1B 86.866 1538 156 11 1462 2961 3047112 3048641 0.000000e+00 1679
8 TraesCS1D01G005600 chr1B 89.168 877 57 14 615 1469 3046016 3046876 0.000000e+00 1059
9 TraesCS1D01G005600 chr1B 91.651 527 43 1 2405 2931 3081324 3081849 0.000000e+00 728
10 TraesCS1D01G005600 chr1B 84.280 757 104 9 1599 2351 3068202 3068947 0.000000e+00 725
11 TraesCS1D01G005600 chr1B 84.635 384 30 9 1 366 3045402 3045774 3.830000e-94 355
12 TraesCS1D01G005600 chr6B 83.011 1860 237 34 1245 3057 2197684 2199511 0.000000e+00 1611
13 TraesCS1D01G005600 chr6B 85.594 1423 177 19 998 2402 17803741 17802329 0.000000e+00 1467
14 TraesCS1D01G005600 chr6B 82.665 848 132 13 1562 2402 944196 945035 0.000000e+00 737
15 TraesCS1D01G005600 chr6B 89.744 507 52 0 998 1504 942985 943491 0.000000e+00 649
16 TraesCS1D01G005600 chr6B 90.625 256 24 0 998 1253 2196073 2196328 1.070000e-89 340
17 TraesCS1D01G005600 chr7D 77.927 2084 368 65 1006 3034 554981123 554979077 0.000000e+00 1216
18 TraesCS1D01G005600 chr7D 76.672 2019 354 83 997 2935 555158913 555156932 0.000000e+00 1011
19 TraesCS1D01G005600 chr7A 74.346 1797 348 73 1351 3090 640669131 640670871 0.000000e+00 660
20 TraesCS1D01G005600 chr4B 80.913 854 135 15 1001 1834 667845473 667844628 0.000000e+00 649
21 TraesCS1D01G005600 chr4B 77.907 430 85 4 1929 2352 667844578 667844153 3.090000e-65 259
22 TraesCS1D01G005600 chr5A 75.149 503 104 15 1001 1485 552298394 552298893 1.880000e-52 217
23 TraesCS1D01G005600 chr3A 75.502 249 58 2 1250 1495 13546122 13546370 5.460000e-23 119


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G005600 chr1D 2515670 2518788 3118 True 5760.0 5760 100.000000 1 3119 1 chr1D.!!$R1 3118
1 TraesCS1D01G005600 chrUn 70994732 70996800 2068 True 1934.0 1934 83.834000 998 3057 1 chrUn.!!$R1 2059
2 TraesCS1D01G005600 chrUn 29859601 29860987 1386 False 883.0 883 78.740000 1001 2352 1 chrUn.!!$F1 1351
3 TraesCS1D01G005600 chrUn 322508459 322509329 870 False 880.0 880 85.156000 2180 3058 1 chrUn.!!$F2 878
4 TraesCS1D01G005600 chrUn 29874627 29876654 2027 False 588.0 952 79.029500 1001 3059 2 chrUn.!!$F3 2058
5 TraesCS1D01G005600 chr1B 2929189 2930680 1491 False 1757.0 1757 88.278000 704 2175 1 chr1B.!!$F1 1471
6 TraesCS1D01G005600 chr1B 3045402 3048641 3239 False 1031.0 1679 86.889667 1 2961 3 chr1B.!!$F4 2960
7 TraesCS1D01G005600 chr1B 3081324 3081849 525 False 728.0 728 91.651000 2405 2931 1 chr1B.!!$F3 526
8 TraesCS1D01G005600 chr1B 3068202 3068947 745 False 725.0 725 84.280000 1599 2351 1 chr1B.!!$F2 752
9 TraesCS1D01G005600 chr6B 17802329 17803741 1412 True 1467.0 1467 85.594000 998 2402 1 chr6B.!!$R1 1404
10 TraesCS1D01G005600 chr6B 2196073 2199511 3438 False 975.5 1611 86.818000 998 3057 2 chr6B.!!$F2 2059
11 TraesCS1D01G005600 chr6B 942985 945035 2050 False 693.0 737 86.204500 998 2402 2 chr6B.!!$F1 1404
12 TraesCS1D01G005600 chr7D 554979077 554981123 2046 True 1216.0 1216 77.927000 1006 3034 1 chr7D.!!$R1 2028
13 TraesCS1D01G005600 chr7D 555156932 555158913 1981 True 1011.0 1011 76.672000 997 2935 1 chr7D.!!$R2 1938
14 TraesCS1D01G005600 chr7A 640669131 640670871 1740 False 660.0 660 74.346000 1351 3090 1 chr7A.!!$F1 1739
15 TraesCS1D01G005600 chr4B 667844153 667845473 1320 True 454.0 649 79.410000 1001 2352 2 chr4B.!!$R1 1351

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
897 1029 0.183014 AGGGCATGCATCTCTCTTGG 59.817 55.0 21.36 0.0 0.0 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2176 4688 0.536006 AGTCCTTGCAGCAGACAACC 60.536 55.0 15.26 0.0 32.82 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
161 164 9.447040 TTTCGTATAGATCTGAAAGTATTCACG 57.553 33.333 5.18 0.00 40.59 4.35
284 296 1.531149 ACACAATCTAGTGCACGCAAC 59.469 47.619 12.01 0.00 43.23 4.17
343 361 2.270923 CACGTACACAGTCATGGATGG 58.729 52.381 0.00 0.00 0.00 3.51
353 371 2.286121 ATGGATGGGGTCGTGGGT 60.286 61.111 0.00 0.00 0.00 4.51
366 384 3.588511 TGGGTTCATGGGCCAGCA 61.589 61.111 13.78 0.00 0.00 4.41
368 386 3.070576 GGTTCATGGGCCAGCACC 61.071 66.667 13.78 13.93 0.00 5.01
369 387 2.036256 GTTCATGGGCCAGCACCT 59.964 61.111 13.78 0.00 0.00 4.00
371 389 1.032114 GTTCATGGGCCAGCACCTAC 61.032 60.000 13.78 0.22 0.00 3.18
372 390 2.124151 CATGGGCCAGCACCTACC 60.124 66.667 13.78 0.00 0.00 3.18
373 391 2.286425 ATGGGCCAGCACCTACCT 60.286 61.111 13.78 0.00 0.00 3.08
374 392 1.930656 ATGGGCCAGCACCTACCTT 60.931 57.895 13.78 0.00 0.00 3.50
375 393 1.926426 ATGGGCCAGCACCTACCTTC 61.926 60.000 13.78 0.00 0.00 3.46
376 394 2.301738 GGGCCAGCACCTACCTTCT 61.302 63.158 4.39 0.00 0.00 2.85
378 396 1.746991 GCCAGCACCTACCTTCTGC 60.747 63.158 0.00 0.00 0.00 4.26
379 397 1.448540 CCAGCACCTACCTTCTGCG 60.449 63.158 0.00 0.00 35.98 5.18
380 398 1.293498 CAGCACCTACCTTCTGCGT 59.707 57.895 0.00 0.00 35.98 5.24
382 400 1.185618 AGCACCTACCTTCTGCGTGA 61.186 55.000 0.00 0.00 35.98 4.35
384 402 1.676014 GCACCTACCTTCTGCGTGATT 60.676 52.381 0.00 0.00 0.00 2.57
385 403 2.418197 GCACCTACCTTCTGCGTGATTA 60.418 50.000 0.00 0.00 0.00 1.75
386 404 3.448686 CACCTACCTTCTGCGTGATTAG 58.551 50.000 0.00 0.00 0.00 1.73
387 405 2.431057 ACCTACCTTCTGCGTGATTAGG 59.569 50.000 0.00 0.00 32.51 2.69
388 406 2.224066 CCTACCTTCTGCGTGATTAGGG 60.224 54.545 0.00 0.00 29.09 3.53
389 407 1.568504 ACCTTCTGCGTGATTAGGGA 58.431 50.000 0.00 0.00 29.09 4.20
390 408 2.119495 ACCTTCTGCGTGATTAGGGAT 58.881 47.619 0.00 0.00 29.09 3.85
391 409 3.305720 ACCTTCTGCGTGATTAGGGATA 58.694 45.455 0.00 0.00 29.09 2.59
392 410 3.322254 ACCTTCTGCGTGATTAGGGATAG 59.678 47.826 0.00 0.00 29.09 2.08
393 411 3.321497 CTTCTGCGTGATTAGGGATAGC 58.679 50.000 0.00 0.00 0.00 2.97
394 412 2.316108 TCTGCGTGATTAGGGATAGCA 58.684 47.619 0.00 0.00 0.00 3.49
396 414 3.324846 TCTGCGTGATTAGGGATAGCAAT 59.675 43.478 0.00 0.00 32.53 3.56
397 415 3.402110 TGCGTGATTAGGGATAGCAATG 58.598 45.455 0.00 0.00 0.00 2.82
399 417 3.338249 CGTGATTAGGGATAGCAATGGG 58.662 50.000 0.00 0.00 0.00 4.00
400 418 3.244561 CGTGATTAGGGATAGCAATGGGT 60.245 47.826 0.00 0.00 0.00 4.51
401 419 4.020573 CGTGATTAGGGATAGCAATGGGTA 60.021 45.833 0.00 0.00 0.00 3.69
419 437 4.248691 GGTACCCATTATCCACGTACTC 57.751 50.000 0.00 0.00 31.92 2.59
420 438 3.893813 GGTACCCATTATCCACGTACTCT 59.106 47.826 0.00 0.00 31.92 3.24
421 439 5.072741 GGTACCCATTATCCACGTACTCTA 58.927 45.833 0.00 0.00 31.92 2.43
422 440 5.713861 GGTACCCATTATCCACGTACTCTAT 59.286 44.000 0.00 0.00 31.92 1.98
423 441 5.723672 ACCCATTATCCACGTACTCTATG 57.276 43.478 0.00 0.00 0.00 2.23
424 442 4.527038 ACCCATTATCCACGTACTCTATGG 59.473 45.833 9.85 9.85 34.58 2.74
425 443 4.081642 CCCATTATCCACGTACTCTATGGG 60.082 50.000 17.55 17.55 43.44 4.00
426 444 4.527038 CCATTATCCACGTACTCTATGGGT 59.473 45.833 9.23 0.00 34.03 4.51
427 445 5.011738 CCATTATCCACGTACTCTATGGGTT 59.988 44.000 9.23 0.00 34.03 4.11
428 446 6.209986 CCATTATCCACGTACTCTATGGGTTA 59.790 42.308 9.23 0.00 34.03 2.85
429 447 7.256048 CCATTATCCACGTACTCTATGGGTTAA 60.256 40.741 9.23 1.87 34.03 2.01
430 448 7.658525 TTATCCACGTACTCTATGGGTTAAA 57.341 36.000 0.00 0.00 34.03 1.52
431 449 5.999205 TCCACGTACTCTATGGGTTAAAA 57.001 39.130 0.00 0.00 34.03 1.52
432 450 5.969423 TCCACGTACTCTATGGGTTAAAAG 58.031 41.667 0.00 0.00 34.03 2.27
433 451 5.105228 TCCACGTACTCTATGGGTTAAAAGG 60.105 44.000 0.00 0.00 34.03 3.11
434 452 5.337813 CCACGTACTCTATGGGTTAAAAGGT 60.338 44.000 0.00 0.00 0.00 3.50
435 453 6.127366 CCACGTACTCTATGGGTTAAAAGGTA 60.127 42.308 0.00 0.00 0.00 3.08
436 454 7.322664 CACGTACTCTATGGGTTAAAAGGTAA 58.677 38.462 0.00 0.00 0.00 2.85
437 455 7.818930 CACGTACTCTATGGGTTAAAAGGTAAA 59.181 37.037 0.00 0.00 0.00 2.01
438 456 8.374743 ACGTACTCTATGGGTTAAAAGGTAAAA 58.625 33.333 0.00 0.00 0.00 1.52
439 457 8.876790 CGTACTCTATGGGTTAAAAGGTAAAAG 58.123 37.037 0.00 0.00 0.00 2.27
440 458 9.730705 GTACTCTATGGGTTAAAAGGTAAAAGT 57.269 33.333 0.00 0.00 0.00 2.66
447 465 9.816787 ATGGGTTAAAAGGTAAAAGTATGAAGA 57.183 29.630 0.00 0.00 0.00 2.87
448 466 9.643735 TGGGTTAAAAGGTAAAAGTATGAAGAA 57.356 29.630 0.00 0.00 0.00 2.52
463 481 8.525290 AGTATGAAGAAAAAGTTATCCCATGG 57.475 34.615 4.14 4.14 0.00 3.66
464 482 8.336235 AGTATGAAGAAAAAGTTATCCCATGGA 58.664 33.333 15.22 0.00 35.55 3.41
465 483 9.136323 GTATGAAGAAAAAGTTATCCCATGGAT 57.864 33.333 15.22 7.61 45.40 3.41
467 485 9.887862 ATGAAGAAAAAGTTATCCCATGGATAT 57.112 29.630 15.22 9.08 43.26 1.63
502 520 9.943465 GAAAATTTGAAACTCATCGAATAAAGC 57.057 29.630 0.00 0.00 33.25 3.51
503 521 9.474920 AAAATTTGAAACTCATCGAATAAAGCA 57.525 25.926 0.00 0.00 33.25 3.91
504 522 8.679288 AATTTGAAACTCATCGAATAAAGCAG 57.321 30.769 0.00 0.00 33.25 4.24
505 523 7.433708 TTTGAAACTCATCGAATAAAGCAGA 57.566 32.000 0.00 0.00 0.00 4.26
506 524 6.408858 TGAAACTCATCGAATAAAGCAGAC 57.591 37.500 0.00 0.00 0.00 3.51
507 525 5.931724 TGAAACTCATCGAATAAAGCAGACA 59.068 36.000 0.00 0.00 0.00 3.41
508 526 5.786401 AACTCATCGAATAAAGCAGACAC 57.214 39.130 0.00 0.00 0.00 3.67
509 527 4.184629 ACTCATCGAATAAAGCAGACACC 58.815 43.478 0.00 0.00 0.00 4.16
510 528 3.186909 TCATCGAATAAAGCAGACACCG 58.813 45.455 0.00 0.00 0.00 4.94
511 529 2.004583 TCGAATAAAGCAGACACCGG 57.995 50.000 0.00 0.00 0.00 5.28
512 530 1.274167 TCGAATAAAGCAGACACCGGT 59.726 47.619 0.00 0.00 0.00 5.28
513 531 2.492881 TCGAATAAAGCAGACACCGGTA 59.507 45.455 6.87 0.00 0.00 4.02
525 543 1.254026 CACCGGTAGTCTTCAGGTCA 58.746 55.000 6.87 0.00 32.04 4.02
529 547 1.616865 CGGTAGTCTTCAGGTCAACCA 59.383 52.381 1.33 0.00 38.89 3.67
628 731 3.110705 AGGCTATCAACATCAGGACACT 58.889 45.455 0.00 0.00 0.00 3.55
629 732 4.290093 AGGCTATCAACATCAGGACACTA 58.710 43.478 0.00 0.00 0.00 2.74
639 742 2.467880 TCAGGACACTATGTCTTCCCC 58.532 52.381 8.75 0.00 46.19 4.81
652 755 6.976934 ATGTCTTCCCCGCAAATAAAATAT 57.023 33.333 0.00 0.00 0.00 1.28
656 759 7.339721 TGTCTTCCCCGCAAATAAAATATACAA 59.660 33.333 0.00 0.00 0.00 2.41
657 760 8.357402 GTCTTCCCCGCAAATAAAATATACAAT 58.643 33.333 0.00 0.00 0.00 2.71
662 765 6.745450 CCCGCAAATAAAATATACAATAGGCG 59.255 38.462 0.00 0.00 38.14 5.52
664 767 7.021196 CGCAAATAAAATATACAATAGGCGCT 58.979 34.615 7.64 0.00 0.00 5.92
669 772 8.848474 ATAAAATATACAATAGGCGCTGTCTT 57.152 30.769 7.64 0.00 0.00 3.01
746 849 0.754957 TCACCACCAACAAGCAAGGG 60.755 55.000 0.00 0.00 0.00 3.95
759 862 0.928229 GCAAGGGATACGTGTAAGCG 59.072 55.000 0.00 0.00 37.94 4.68
774 877 5.277442 CGTGTAAGCGGAAAAAGTAAAGGAA 60.277 40.000 0.00 0.00 0.00 3.36
787 908 7.668525 AAAGTAAAGGAAAGAAGATGTACCG 57.331 36.000 0.00 0.00 0.00 4.02
809 931 2.666508 ACATCACGATGAGCACGTTAAC 59.333 45.455 13.83 0.00 42.07 2.01
810 932 2.717580 TCACGATGAGCACGTTAACT 57.282 45.000 3.71 0.00 42.07 2.24
811 933 3.835378 TCACGATGAGCACGTTAACTA 57.165 42.857 3.71 0.00 42.07 2.24
812 934 3.495193 TCACGATGAGCACGTTAACTAC 58.505 45.455 3.71 0.00 42.07 2.73
816 938 4.633126 ACGATGAGCACGTTAACTACTAGA 59.367 41.667 3.71 0.00 41.18 2.43
866 998 4.358214 ACACCCTTTTCTTTTCCTTTCCA 58.642 39.130 0.00 0.00 0.00 3.53
897 1029 0.183014 AGGGCATGCATCTCTCTTGG 59.817 55.000 21.36 0.00 0.00 3.61
907 1039 3.576118 GCATCTCTCTTGGCTACCTATCA 59.424 47.826 0.00 0.00 0.00 2.15
956 1088 1.167851 GGCTACATCTGTTGCTGCAA 58.832 50.000 11.69 11.69 44.21 4.08
1099 1235 2.827755 ACTTCCTCTTCTTCTCCTCCC 58.172 52.381 0.00 0.00 0.00 4.30
1276 2782 0.413434 TGTCCTCCTCATCCACCTCA 59.587 55.000 0.00 0.00 0.00 3.86
1329 2835 0.753262 AAGACAACGAGCTGTGGACT 59.247 50.000 0.00 0.00 0.00 3.85
1347 2853 3.208383 CGGCATGCCATAACCGCA 61.208 61.111 34.93 0.00 39.08 5.69
1385 2891 1.014564 GCCCTCTACGTGTTCTGCAC 61.015 60.000 0.00 0.00 44.36 4.57
1419 2949 1.552792 GAGAAGAGGTTACTGCAGGCT 59.447 52.381 19.93 0.00 0.00 4.58
1452 2982 2.864343 GTTCGTCGTTGGGATTATCAGG 59.136 50.000 0.00 0.00 0.00 3.86
1584 4063 3.499918 GCATTTCCCGTCTTGGATATGAG 59.500 47.826 12.71 0.00 42.89 2.90
1616 4095 3.135530 AGTGGAAGACAAGAAGAAGCAGT 59.864 43.478 0.00 0.00 0.00 4.40
1648 4127 5.253330 AGGACATTCCGCTTGAAGAATTTA 58.747 37.500 0.00 0.00 42.75 1.40
1654 4133 7.968405 ACATTCCGCTTGAAGAATTTATACAAC 59.032 33.333 0.00 0.00 36.14 3.32
1709 4188 2.393271 AGTGATCAAGAGAAAGCGGG 57.607 50.000 0.00 0.00 0.00 6.13
1722 4201 2.789409 AAGCGGGAAAACTAGCTGAT 57.211 45.000 0.00 0.00 40.17 2.90
1773 4255 4.920640 ACTGGTAGACATATCAACTCCG 57.079 45.455 0.00 0.00 0.00 4.63
2042 4551 5.301551 ACATCTTGTTCTTTTGTACCATGCA 59.698 36.000 0.00 0.00 0.00 3.96
2043 4552 6.015180 ACATCTTGTTCTTTTGTACCATGCAT 60.015 34.615 0.00 0.00 0.00 3.96
2044 4553 5.771469 TCTTGTTCTTTTGTACCATGCATG 58.229 37.500 20.19 20.19 0.00 4.06
2045 4554 5.301551 TCTTGTTCTTTTGTACCATGCATGT 59.698 36.000 24.58 15.01 0.00 3.21
2088 4597 0.462759 CTTGGTCCTTGGATCGGAGC 60.463 60.000 9.61 9.61 46.52 4.70
2097 4609 1.801242 TGGATCGGAGCCTTTGGATA 58.199 50.000 14.18 0.00 0.00 2.59
2125 4637 5.734031 AGGTTCCCCAATATAGCTTCTTT 57.266 39.130 0.00 0.00 0.00 2.52
2176 4688 2.420628 TTTTGATGAAGCTTGCCACG 57.579 45.000 2.10 0.00 0.00 4.94
2442 4991 3.862642 GCTTTCACCACCAAAACACAACA 60.863 43.478 0.00 0.00 0.00 3.33
2455 5004 1.077357 ACAACACCTCACGGCCAAA 60.077 52.632 2.24 0.00 0.00 3.28
2459 5008 2.192861 CACCTCACGGCCAAAAGCA 61.193 57.895 2.24 0.00 46.50 3.91
2820 5387 2.114670 CAGGGGGTACTTGCATGCG 61.115 63.158 14.09 1.59 0.00 4.73
2864 5431 1.739707 GCTGCTCTCTGATGTCTGGTG 60.740 57.143 0.00 0.00 0.00 4.17
2865 5432 1.549620 CTGCTCTCTGATGTCTGGTGT 59.450 52.381 0.00 0.00 0.00 4.16
2964 5555 6.172630 AGAAGAAGAAGAAGAAGAAGATGGC 58.827 40.000 0.00 0.00 0.00 4.40
2968 5559 2.682155 AGAAGAAGAAGATGGCGACC 57.318 50.000 0.00 0.00 0.00 4.79
3064 5664 7.815398 TTGTTTGTTGATGATGTTATGATGC 57.185 32.000 0.00 0.00 0.00 3.91
3066 5666 7.604549 TGTTTGTTGATGATGTTATGATGCTT 58.395 30.769 0.00 0.00 0.00 3.91
3079 5681 6.149973 TGTTATGATGCTTGACTTTCTTCCTG 59.850 38.462 0.00 0.00 0.00 3.86
3082 5684 3.297134 TGCTTGACTTTCTTCCTGGTT 57.703 42.857 0.00 0.00 0.00 3.67
3090 5692 4.729868 ACTTTCTTCCTGGTTGTAATGCT 58.270 39.130 0.00 0.00 0.00 3.79
3091 5693 5.140454 ACTTTCTTCCTGGTTGTAATGCTT 58.860 37.500 0.00 0.00 0.00 3.91
3092 5694 5.598417 ACTTTCTTCCTGGTTGTAATGCTTT 59.402 36.000 0.00 0.00 0.00 3.51
3093 5695 6.775629 ACTTTCTTCCTGGTTGTAATGCTTTA 59.224 34.615 0.00 0.00 0.00 1.85
3094 5696 7.451566 ACTTTCTTCCTGGTTGTAATGCTTTAT 59.548 33.333 0.00 0.00 0.00 1.40
3095 5697 6.757897 TCTTCCTGGTTGTAATGCTTTATG 57.242 37.500 0.00 0.00 0.00 1.90
3096 5698 6.245408 TCTTCCTGGTTGTAATGCTTTATGT 58.755 36.000 0.00 0.00 0.00 2.29
3097 5699 6.374333 TCTTCCTGGTTGTAATGCTTTATGTC 59.626 38.462 0.00 0.00 0.00 3.06
3098 5700 5.565509 TCCTGGTTGTAATGCTTTATGTCA 58.434 37.500 0.00 0.00 0.00 3.58
3099 5701 5.647658 TCCTGGTTGTAATGCTTTATGTCAG 59.352 40.000 0.00 2.87 0.00 3.51
3100 5702 5.415701 CCTGGTTGTAATGCTTTATGTCAGT 59.584 40.000 0.00 0.00 0.00 3.41
3101 5703 6.071952 CCTGGTTGTAATGCTTTATGTCAGTT 60.072 38.462 0.00 0.00 0.00 3.16
3102 5704 6.676950 TGGTTGTAATGCTTTATGTCAGTTG 58.323 36.000 0.00 0.00 0.00 3.16
3103 5705 6.488344 TGGTTGTAATGCTTTATGTCAGTTGA 59.512 34.615 0.00 0.00 0.00 3.18
3104 5706 6.801862 GGTTGTAATGCTTTATGTCAGTTGAC 59.198 38.462 5.33 5.33 44.97 3.18
3105 5707 6.494893 TGTAATGCTTTATGTCAGTTGACC 57.505 37.500 9.60 0.00 44.15 4.02
3106 5708 6.000840 TGTAATGCTTTATGTCAGTTGACCA 58.999 36.000 9.60 0.29 44.15 4.02
3107 5709 5.633830 AATGCTTTATGTCAGTTGACCAG 57.366 39.130 9.60 2.61 44.15 4.00
3108 5710 3.411446 TGCTTTATGTCAGTTGACCAGG 58.589 45.455 9.60 0.00 44.15 4.45
3109 5711 2.162408 GCTTTATGTCAGTTGACCAGGC 59.838 50.000 9.60 2.97 44.15 4.85
3110 5712 3.679389 CTTTATGTCAGTTGACCAGGCT 58.321 45.455 9.60 0.00 44.15 4.58
3111 5713 2.768253 TATGTCAGTTGACCAGGCTG 57.232 50.000 7.75 7.75 44.15 4.85
3112 5714 0.767375 ATGTCAGTTGACCAGGCTGT 59.233 50.000 14.43 1.17 44.15 4.40
3113 5715 0.106708 TGTCAGTTGACCAGGCTGTC 59.893 55.000 14.43 11.41 44.15 3.51
3114 5716 0.394565 GTCAGTTGACCAGGCTGTCT 59.605 55.000 14.43 0.00 39.07 3.41
3115 5717 0.681733 TCAGTTGACCAGGCTGTCTC 59.318 55.000 14.43 8.05 36.21 3.36
3116 5718 0.683973 CAGTTGACCAGGCTGTCTCT 59.316 55.000 14.43 10.40 36.21 3.10
3117 5719 0.683973 AGTTGACCAGGCTGTCTCTG 59.316 55.000 14.43 0.00 36.21 3.35
3118 5720 0.394565 GTTGACCAGGCTGTCTCTGT 59.605 55.000 14.43 3.15 36.21 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
99 102 9.588774 TCGTGTATGAAAATTAAAAAGAAGTCG 57.411 29.630 0.00 0.00 0.00 4.18
175 178 2.453521 ACGGTTATCTGTCTACTGCCA 58.546 47.619 0.00 0.00 0.00 4.92
179 182 7.400599 TGTTATGAACGGTTATCTGTCTACT 57.599 36.000 0.00 0.00 32.07 2.57
182 185 7.159372 ACTTTGTTATGAACGGTTATCTGTCT 58.841 34.615 0.00 0.00 32.07 3.41
252 255 6.430000 GCACTAGATTGTGTCCTCCTTAAAAA 59.570 38.462 0.00 0.00 39.89 1.94
257 260 2.906389 TGCACTAGATTGTGTCCTCCTT 59.094 45.455 0.00 0.00 39.89 3.36
260 272 2.263077 CGTGCACTAGATTGTGTCCTC 58.737 52.381 16.19 0.00 39.89 3.71
291 303 2.076863 AGGATTTGCTTACTCGTGTGC 58.923 47.619 0.00 0.00 0.00 4.57
319 337 2.101750 TCCATGACTGTGTACGTGTGTT 59.898 45.455 0.00 0.00 0.00 3.32
321 339 2.432206 TCCATGACTGTGTACGTGTG 57.568 50.000 0.00 0.00 0.00 3.82
322 340 2.353704 CCATCCATGACTGTGTACGTGT 60.354 50.000 0.00 0.00 0.00 4.49
323 341 2.270923 CCATCCATGACTGTGTACGTG 58.729 52.381 0.00 0.00 0.00 4.49
324 342 1.207089 CCCATCCATGACTGTGTACGT 59.793 52.381 0.00 0.00 0.00 3.57
325 343 1.473257 CCCCATCCATGACTGTGTACG 60.473 57.143 0.00 0.00 0.00 3.67
326 344 1.559682 ACCCCATCCATGACTGTGTAC 59.440 52.381 0.00 0.00 0.00 2.90
327 345 1.837439 GACCCCATCCATGACTGTGTA 59.163 52.381 0.00 0.00 0.00 2.90
332 350 1.626356 CCACGACCCCATCCATGACT 61.626 60.000 0.00 0.00 0.00 3.41
333 351 1.153168 CCACGACCCCATCCATGAC 60.153 63.158 0.00 0.00 0.00 3.06
343 361 2.045340 CCCATGAACCCACGACCC 60.045 66.667 0.00 0.00 0.00 4.46
353 371 1.302949 GTAGGTGCTGGCCCATGAA 59.697 57.895 0.00 0.00 0.00 2.57
366 384 2.431057 CCTAATCACGCAGAAGGTAGGT 59.569 50.000 0.00 0.00 30.43 3.08
368 386 2.693591 TCCCTAATCACGCAGAAGGTAG 59.306 50.000 0.00 0.00 0.00 3.18
369 387 2.742348 TCCCTAATCACGCAGAAGGTA 58.258 47.619 0.00 0.00 0.00 3.08
371 389 2.918712 ATCCCTAATCACGCAGAAGG 57.081 50.000 0.00 0.00 0.00 3.46
372 390 3.243873 TGCTATCCCTAATCACGCAGAAG 60.244 47.826 0.00 0.00 0.00 2.85
373 391 2.698274 TGCTATCCCTAATCACGCAGAA 59.302 45.455 0.00 0.00 0.00 3.02
374 392 2.316108 TGCTATCCCTAATCACGCAGA 58.684 47.619 0.00 0.00 0.00 4.26
375 393 2.820059 TGCTATCCCTAATCACGCAG 57.180 50.000 0.00 0.00 0.00 5.18
376 394 3.402110 CATTGCTATCCCTAATCACGCA 58.598 45.455 0.00 0.00 0.00 5.24
378 396 3.244561 ACCCATTGCTATCCCTAATCACG 60.245 47.826 0.00 0.00 0.00 4.35
379 397 4.373156 ACCCATTGCTATCCCTAATCAC 57.627 45.455 0.00 0.00 0.00 3.06
380 398 4.288626 GGTACCCATTGCTATCCCTAATCA 59.711 45.833 0.00 0.00 0.00 2.57
382 400 4.929146 GGTACCCATTGCTATCCCTAAT 57.071 45.455 0.00 0.00 0.00 1.73
399 417 6.349944 CCATAGAGTACGTGGATAATGGGTAC 60.350 46.154 0.00 0.00 34.94 3.34
400 418 5.713389 CCATAGAGTACGTGGATAATGGGTA 59.287 44.000 0.00 0.00 34.94 3.69
401 419 4.527038 CCATAGAGTACGTGGATAATGGGT 59.473 45.833 0.00 0.00 34.94 4.51
403 421 4.527038 ACCCATAGAGTACGTGGATAATGG 59.473 45.833 0.00 6.21 34.94 3.16
404 422 5.723672 ACCCATAGAGTACGTGGATAATG 57.276 43.478 0.00 0.00 34.94 1.90
405 423 7.844493 TTAACCCATAGAGTACGTGGATAAT 57.156 36.000 0.00 0.00 34.94 1.28
406 424 7.658525 TTTAACCCATAGAGTACGTGGATAA 57.341 36.000 0.00 0.00 34.94 1.75
408 426 6.407752 CCTTTTAACCCATAGAGTACGTGGAT 60.408 42.308 0.00 0.00 34.94 3.41
409 427 5.105228 CCTTTTAACCCATAGAGTACGTGGA 60.105 44.000 0.00 0.00 34.94 4.02
410 428 5.114081 CCTTTTAACCCATAGAGTACGTGG 58.886 45.833 0.00 0.00 0.00 4.94
411 429 5.727434 ACCTTTTAACCCATAGAGTACGTG 58.273 41.667 0.00 0.00 0.00 4.49
412 430 7.480760 TTACCTTTTAACCCATAGAGTACGT 57.519 36.000 0.00 0.00 0.00 3.57
413 431 8.776376 TTTTACCTTTTAACCCATAGAGTACG 57.224 34.615 0.00 0.00 0.00 3.67
421 439 9.816787 TCTTCATACTTTTACCTTTTAACCCAT 57.183 29.630 0.00 0.00 0.00 4.00
422 440 9.643735 TTCTTCATACTTTTACCTTTTAACCCA 57.356 29.630 0.00 0.00 0.00 4.51
437 455 8.971073 CCATGGGATAACTTTTTCTTCATACTT 58.029 33.333 2.85 0.00 0.00 2.24
438 456 8.336235 TCCATGGGATAACTTTTTCTTCATACT 58.664 33.333 13.02 0.00 0.00 2.12
439 457 8.519799 TCCATGGGATAACTTTTTCTTCATAC 57.480 34.615 13.02 0.00 0.00 2.39
441 459 9.887862 ATATCCATGGGATAACTTTTTCTTCAT 57.112 29.630 13.02 0.00 46.18 2.57
476 494 9.943465 GCTTTATTCGATGAGTTTCAAATTTTC 57.057 29.630 0.00 0.00 0.00 2.29
477 495 9.474920 TGCTTTATTCGATGAGTTTCAAATTTT 57.525 25.926 0.00 0.00 0.00 1.82
478 496 9.132521 CTGCTTTATTCGATGAGTTTCAAATTT 57.867 29.630 0.00 0.00 0.00 1.82
479 497 8.514594 TCTGCTTTATTCGATGAGTTTCAAATT 58.485 29.630 0.00 0.00 0.00 1.82
480 498 7.965107 GTCTGCTTTATTCGATGAGTTTCAAAT 59.035 33.333 0.00 0.00 0.00 2.32
481 499 7.041440 TGTCTGCTTTATTCGATGAGTTTCAAA 60.041 33.333 0.00 0.00 0.00 2.69
482 500 6.426633 TGTCTGCTTTATTCGATGAGTTTCAA 59.573 34.615 0.00 0.00 0.00 2.69
483 501 5.931724 TGTCTGCTTTATTCGATGAGTTTCA 59.068 36.000 0.00 0.00 0.00 2.69
484 502 6.244275 GTGTCTGCTTTATTCGATGAGTTTC 58.756 40.000 0.00 0.00 0.00 2.78
485 503 5.122396 GGTGTCTGCTTTATTCGATGAGTTT 59.878 40.000 0.00 0.00 0.00 2.66
486 504 4.631813 GGTGTCTGCTTTATTCGATGAGTT 59.368 41.667 0.00 0.00 0.00 3.01
487 505 4.184629 GGTGTCTGCTTTATTCGATGAGT 58.815 43.478 0.00 0.00 0.00 3.41
488 506 3.243877 CGGTGTCTGCTTTATTCGATGAG 59.756 47.826 0.00 0.00 0.00 2.90
489 507 3.186909 CGGTGTCTGCTTTATTCGATGA 58.813 45.455 0.00 0.00 0.00 2.92
490 508 2.285220 CCGGTGTCTGCTTTATTCGATG 59.715 50.000 0.00 0.00 0.00 3.84
491 509 2.093658 ACCGGTGTCTGCTTTATTCGAT 60.094 45.455 6.12 0.00 0.00 3.59
492 510 1.274167 ACCGGTGTCTGCTTTATTCGA 59.726 47.619 6.12 0.00 0.00 3.71
493 511 1.722011 ACCGGTGTCTGCTTTATTCG 58.278 50.000 6.12 0.00 0.00 3.34
494 512 3.858247 ACTACCGGTGTCTGCTTTATTC 58.142 45.455 19.93 0.00 0.00 1.75
495 513 3.514309 AGACTACCGGTGTCTGCTTTATT 59.486 43.478 27.89 10.49 42.46 1.40
496 514 3.097614 AGACTACCGGTGTCTGCTTTAT 58.902 45.455 27.89 11.03 42.46 1.40
497 515 2.522185 AGACTACCGGTGTCTGCTTTA 58.478 47.619 27.89 3.66 42.46 1.85
498 516 1.339097 AGACTACCGGTGTCTGCTTT 58.661 50.000 27.89 12.11 42.46 3.51
499 517 1.272769 GAAGACTACCGGTGTCTGCTT 59.727 52.381 28.65 19.49 43.16 3.91
500 518 0.889306 GAAGACTACCGGTGTCTGCT 59.111 55.000 28.65 19.37 43.16 4.24
501 519 0.601558 TGAAGACTACCGGTGTCTGC 59.398 55.000 28.65 27.39 43.16 4.26
502 520 1.202582 CCTGAAGACTACCGGTGTCTG 59.797 57.143 28.65 20.05 43.16 3.51
503 521 1.203025 ACCTGAAGACTACCGGTGTCT 60.203 52.381 24.94 24.94 45.55 3.41
504 522 1.201880 GACCTGAAGACTACCGGTGTC 59.798 57.143 19.93 21.35 34.88 3.67
505 523 1.254954 GACCTGAAGACTACCGGTGT 58.745 55.000 19.93 13.62 0.00 4.16
506 524 1.254026 TGACCTGAAGACTACCGGTG 58.746 55.000 19.93 10.05 0.00 4.94
507 525 1.617357 GTTGACCTGAAGACTACCGGT 59.383 52.381 13.98 13.98 0.00 5.28
508 526 1.067071 GGTTGACCTGAAGACTACCGG 60.067 57.143 0.00 0.00 0.00 5.28
509 527 1.616865 TGGTTGACCTGAAGACTACCG 59.383 52.381 1.34 0.00 36.82 4.02
510 528 3.764237 TTGGTTGACCTGAAGACTACC 57.236 47.619 1.34 0.00 36.82 3.18
555 575 9.683069 GACAAGATGTCACATCTAATTTGTTTT 57.317 29.630 20.94 0.00 46.22 2.43
585 605 9.794719 AGCCTTCTAGTACTTTGTTTTTCTAAT 57.205 29.630 0.00 0.00 0.00 1.73
589 671 9.216117 TGATAGCCTTCTAGTACTTTGTTTTTC 57.784 33.333 0.00 0.00 0.00 2.29
602 684 5.069648 TGTCCTGATGTTGATAGCCTTCTAG 59.930 44.000 0.00 0.00 0.00 2.43
628 731 9.005777 GTATATTTTATTTGCGGGGAAGACATA 57.994 33.333 0.00 0.00 0.00 2.29
629 732 6.976934 ATATTTTATTTGCGGGGAAGACAT 57.023 33.333 0.00 0.00 0.00 3.06
639 742 7.007367 CAGCGCCTATTGTATATTTTATTTGCG 59.993 37.037 2.29 0.00 38.82 4.85
652 755 1.138266 GGGAAGACAGCGCCTATTGTA 59.862 52.381 2.29 0.00 0.00 2.41
656 759 2.797278 CGGGGAAGACAGCGCCTAT 61.797 63.158 2.29 0.00 36.31 2.57
657 760 3.458163 CGGGGAAGACAGCGCCTA 61.458 66.667 2.29 0.00 36.31 3.93
662 765 0.960364 TTTCATGCGGGGAAGACAGC 60.960 55.000 0.00 0.00 0.00 4.40
664 767 0.690192 TCTTTCATGCGGGGAAGACA 59.310 50.000 0.00 0.00 0.00 3.41
669 772 0.918983 AGGATTCTTTCATGCGGGGA 59.081 50.000 0.00 0.00 0.00 4.81
746 849 4.916099 ACTTTTTCCGCTTACACGTATC 57.084 40.909 0.00 0.00 0.00 2.24
759 862 9.894783 GTACATCTTCTTTCCTTTACTTTTTCC 57.105 33.333 0.00 0.00 0.00 3.13
787 908 1.350193 AACGTGCTCATCGTGATGTC 58.650 50.000 9.51 4.36 41.38 3.06
795 916 8.504815 TGATATCTAGTAGTTAACGTGCTCATC 58.495 37.037 3.98 0.00 0.00 2.92
809 931 3.568430 TGCGTGGTGGTGATATCTAGTAG 59.432 47.826 3.98 0.00 0.00 2.57
810 932 3.558033 TGCGTGGTGGTGATATCTAGTA 58.442 45.455 3.98 0.00 0.00 1.82
811 933 2.384828 TGCGTGGTGGTGATATCTAGT 58.615 47.619 3.98 0.00 0.00 2.57
812 934 3.384668 CTTGCGTGGTGGTGATATCTAG 58.615 50.000 3.98 0.00 0.00 2.43
816 938 0.748005 GCCTTGCGTGGTGGTGATAT 60.748 55.000 0.00 0.00 0.00 1.63
838 960 3.621268 GGAAAAGAAAAGGGTGTTGTTGC 59.379 43.478 0.00 0.00 0.00 4.17
839 961 5.084818 AGGAAAAGAAAAGGGTGTTGTTG 57.915 39.130 0.00 0.00 0.00 3.33
840 962 5.755409 AAGGAAAAGAAAAGGGTGTTGTT 57.245 34.783 0.00 0.00 0.00 2.83
866 998 1.755179 CATGCCCTCGAAACCAAGAT 58.245 50.000 0.00 0.00 0.00 2.40
897 1029 5.234466 ACTCCAATGGATTGATAGGTAGC 57.766 43.478 0.87 0.00 40.14 3.58
907 1039 7.006509 TCTTCTTCTTTCAACTCCAATGGATT 58.993 34.615 0.87 0.00 0.00 3.01
956 1088 8.254508 GTCTCTCTCTTGGTCTTGTGTATAATT 58.745 37.037 0.00 0.00 0.00 1.40
1329 2835 2.899838 GCGGTTATGGCATGCCGA 60.900 61.111 33.77 19.23 46.33 5.54
1347 2853 2.122989 ACCGTGACCTGGGACACT 60.123 61.111 16.98 0.74 38.32 3.55
1452 2982 0.466922 CCCATGGCTTCTGGATGGAC 60.467 60.000 6.09 0.00 39.29 4.02
1527 3962 0.307760 GTGCAACCAGACCTTGTTCG 59.692 55.000 0.00 0.00 0.00 3.95
1554 4033 1.079127 ACGGGAAATGCAGTCTCCG 60.079 57.895 21.09 21.09 42.69 4.63
1559 4038 0.400213 TCCAAGACGGGAAATGCAGT 59.600 50.000 0.00 0.00 32.90 4.40
1616 4095 1.135083 GCGGAATGTCCTTCTCTTCGA 60.135 52.381 0.00 0.00 33.30 3.71
1648 4127 1.270550 GCACCTGCTTGCTTGTTGTAT 59.729 47.619 0.00 0.00 39.59 2.29
1654 4133 1.859427 ATCACGCACCTGCTTGCTTG 61.859 55.000 0.00 5.90 41.81 4.01
1671 4150 3.370366 CACTTGCTAACTCTGACAGCATC 59.630 47.826 0.00 0.00 44.29 3.91
1672 4151 3.007290 TCACTTGCTAACTCTGACAGCAT 59.993 43.478 0.00 0.00 44.29 3.79
1709 4188 6.868622 TCCTTAGAGTCATCAGCTAGTTTTC 58.131 40.000 0.00 0.00 0.00 2.29
2042 4551 4.284178 AGCAATAGGAAATCCAGCAACAT 58.716 39.130 1.67 0.00 38.89 2.71
2043 4552 3.696051 GAGCAATAGGAAATCCAGCAACA 59.304 43.478 1.67 0.00 38.89 3.33
2044 4553 3.950395 AGAGCAATAGGAAATCCAGCAAC 59.050 43.478 1.67 0.46 38.89 4.17
2045 4554 4.240881 AGAGCAATAGGAAATCCAGCAA 57.759 40.909 1.67 0.00 38.89 3.91
2125 4637 3.004002 TCTTCTTACGAGCACAGAACGAA 59.996 43.478 0.00 0.00 0.00 3.85
2176 4688 0.536006 AGTCCTTGCAGCAGACAACC 60.536 55.000 15.26 0.00 32.82 3.77
2459 5008 1.002868 ACTCTGCTTTGAGCGGCAT 60.003 52.632 1.45 0.00 46.94 4.40
2820 5387 3.064900 AGGCCTTCACTCATGTTCTTC 57.935 47.619 0.00 0.00 0.00 2.87
2854 5421 3.667497 TGACAAGAGACACCAGACATC 57.333 47.619 0.00 0.00 0.00 3.06
2864 5431 3.634397 TCCCCATGAATGACAAGAGAC 57.366 47.619 0.00 0.00 0.00 3.36
2865 5432 3.117776 CCATCCCCATGAATGACAAGAGA 60.118 47.826 0.00 0.00 30.57 3.10
2968 5559 1.386533 GATCTGCCTTCACCACCATG 58.613 55.000 0.00 0.00 0.00 3.66
3058 5658 4.015084 CCAGGAAGAAAGTCAAGCATCAT 58.985 43.478 0.00 0.00 0.00 2.45
3059 5659 3.181440 ACCAGGAAGAAAGTCAAGCATCA 60.181 43.478 0.00 0.00 0.00 3.07
3064 5664 6.672147 CATTACAACCAGGAAGAAAGTCAAG 58.328 40.000 0.00 0.00 0.00 3.02
3066 5666 4.518970 GCATTACAACCAGGAAGAAAGTCA 59.481 41.667 0.00 0.00 0.00 3.41
3079 5681 6.801862 GTCAACTGACATAAAGCATTACAACC 59.198 38.462 4.96 0.00 44.18 3.77
3082 5684 6.000840 TGGTCAACTGACATAAAGCATTACA 58.999 36.000 11.76 0.00 46.47 2.41
3090 5692 3.181445 ACAGCCTGGTCAACTGACATAAA 60.181 43.478 11.76 0.00 46.47 1.40
3091 5693 2.371841 ACAGCCTGGTCAACTGACATAA 59.628 45.455 11.76 0.00 46.47 1.90
3092 5694 1.977854 ACAGCCTGGTCAACTGACATA 59.022 47.619 11.76 0.00 46.47 2.29
3093 5695 0.767375 ACAGCCTGGTCAACTGACAT 59.233 50.000 11.76 0.00 46.47 3.06
3094 5696 0.106708 GACAGCCTGGTCAACTGACA 59.893 55.000 11.76 0.00 46.47 3.58
3095 5697 0.394565 AGACAGCCTGGTCAACTGAC 59.605 55.000 6.12 0.98 44.04 3.51
3096 5698 0.681733 GAGACAGCCTGGTCAACTGA 59.318 55.000 6.12 0.00 40.29 3.41
3097 5699 0.683973 AGAGACAGCCTGGTCAACTG 59.316 55.000 0.00 0.00 40.29 3.16
3098 5700 0.683973 CAGAGACAGCCTGGTCAACT 59.316 55.000 0.00 0.80 40.29 3.16
3099 5701 0.394565 ACAGAGACAGCCTGGTCAAC 59.605 55.000 0.00 0.00 40.29 3.18
3100 5702 2.840199 ACAGAGACAGCCTGGTCAA 58.160 52.632 0.00 0.00 40.29 3.18
3101 5703 4.627394 ACAGAGACAGCCTGGTCA 57.373 55.556 0.00 0.00 40.29 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.