Multiple sequence alignment - TraesCS1D01G005500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1D01G005500 | chr1D | 100.000 | 3944 | 0 | 0 | 1 | 3944 | 2504660 | 2508603 | 0.000000e+00 | 7284.0 |
1 | TraesCS1D01G005500 | chr1D | 100.000 | 1566 | 0 | 0 | 4342 | 5907 | 2509001 | 2510566 | 0.000000e+00 | 2892.0 |
2 | TraesCS1D01G005500 | chr1D | 91.429 | 455 | 28 | 6 | 4342 | 4787 | 3295373 | 3295825 | 1.090000e-171 | 614.0 |
3 | TraesCS1D01G005500 | chr1D | 82.966 | 681 | 102 | 9 | 5158 | 5837 | 338929193 | 338929860 | 2.360000e-168 | 603.0 |
4 | TraesCS1D01G005500 | chr1D | 90.826 | 109 | 9 | 1 | 4760 | 4868 | 468150163 | 468150056 | 1.720000e-30 | 145.0 |
5 | TraesCS1D01G005500 | chrUn | 94.742 | 3043 | 107 | 14 | 651 | 3680 | 239335363 | 239338365 | 0.000000e+00 | 4684.0 |
6 | TraesCS1D01G005500 | chrUn | 94.742 | 3043 | 107 | 14 | 651 | 3680 | 267859102 | 267862104 | 0.000000e+00 | 4684.0 |
7 | TraesCS1D01G005500 | chrUn | 96.383 | 2295 | 71 | 6 | 875 | 3165 | 267776099 | 267778385 | 0.000000e+00 | 3768.0 |
8 | TraesCS1D01G005500 | chrUn | 96.383 | 2295 | 71 | 6 | 875 | 3165 | 324119988 | 324117702 | 0.000000e+00 | 3768.0 |
9 | TraesCS1D01G005500 | chrUn | 77.929 | 1613 | 256 | 67 | 996 | 2543 | 248330031 | 248331608 | 0.000000e+00 | 915.0 |
10 | TraesCS1D01G005500 | chrUn | 92.217 | 591 | 16 | 9 | 1 | 585 | 239334807 | 239335373 | 0.000000e+00 | 809.0 |
11 | TraesCS1D01G005500 | chrUn | 92.217 | 591 | 16 | 9 | 1 | 585 | 267858546 | 267859112 | 0.000000e+00 | 809.0 |
12 | TraesCS1D01G005500 | chrUn | 94.737 | 513 | 26 | 1 | 3167 | 3679 | 321750963 | 321751474 | 0.000000e+00 | 797.0 |
13 | TraesCS1D01G005500 | chrUn | 84.580 | 655 | 88 | 8 | 5192 | 5845 | 30374825 | 30375467 | 6.460000e-179 | 638.0 |
14 | TraesCS1D01G005500 | chrUn | 77.221 | 1137 | 181 | 50 | 1088 | 2199 | 260338667 | 260337584 | 1.420000e-165 | 593.0 |
15 | TraesCS1D01G005500 | chrUn | 79.237 | 891 | 131 | 34 | 1669 | 2543 | 307586750 | 307585898 | 6.640000e-159 | 571.0 |
16 | TraesCS1D01G005500 | chrUn | 79.125 | 891 | 132 | 34 | 1669 | 2543 | 307590893 | 307590041 | 3.090000e-157 | 566.0 |
17 | TraesCS1D01G005500 | chrUn | 93.642 | 346 | 13 | 2 | 1 | 337 | 275587535 | 275587880 | 5.280000e-140 | 508.0 |
18 | TraesCS1D01G005500 | chrUn | 93.642 | 346 | 13 | 2 | 1 | 337 | 424170148 | 424169803 | 5.280000e-140 | 508.0 |
19 | TraesCS1D01G005500 | chrUn | 92.241 | 232 | 12 | 4 | 3705 | 3934 | 126987341 | 126987568 | 2.050000e-84 | 324.0 |
20 | TraesCS1D01G005500 | chrUn | 91.064 | 235 | 17 | 3 | 3705 | 3937 | 30239668 | 30239900 | 1.240000e-81 | 315.0 |
21 | TraesCS1D01G005500 | chrUn | 90.678 | 236 | 18 | 4 | 3704 | 3937 | 108278879 | 108279112 | 1.600000e-80 | 311.0 |
22 | TraesCS1D01G005500 | chrUn | 95.276 | 127 | 6 | 0 | 339 | 465 | 275589134 | 275589260 | 1.000000e-47 | 202.0 |
23 | TraesCS1D01G005500 | chrUn | 81.928 | 166 | 30 | 0 | 1097 | 1262 | 42424 | 42589 | 2.220000e-29 | 141.0 |
24 | TraesCS1D01G005500 | chrUn | 84.672 | 137 | 3 | 6 | 693 | 829 | 267775982 | 267776100 | 2.890000e-23 | 121.0 |
25 | TraesCS1D01G005500 | chrUn | 84.286 | 140 | 4 | 6 | 693 | 832 | 324120105 | 324119984 | 2.890000e-23 | 121.0 |
26 | TraesCS1D01G005500 | chrUn | 95.833 | 48 | 0 | 2 | 515 | 562 | 267775935 | 267775980 | 6.350000e-10 | 76.8 |
27 | TraesCS1D01G005500 | chrUn | 95.833 | 48 | 0 | 2 | 515 | 562 | 324120152 | 324120107 | 6.350000e-10 | 76.8 |
28 | TraesCS1D01G005500 | chr6B | 89.798 | 843 | 47 | 18 | 1851 | 2673 | 25571861 | 25572684 | 0.000000e+00 | 1044.0 |
29 | TraesCS1D01G005500 | chr6B | 92.320 | 612 | 27 | 8 | 1259 | 1854 | 25571209 | 25571816 | 0.000000e+00 | 852.0 |
30 | TraesCS1D01G005500 | chr6B | 83.792 | 654 | 95 | 5 | 5192 | 5845 | 137428048 | 137427406 | 1.410000e-170 | 610.0 |
31 | TraesCS1D01G005500 | chr6B | 84.165 | 581 | 58 | 21 | 2681 | 3236 | 25591027 | 25591598 | 3.130000e-147 | 532.0 |
32 | TraesCS1D01G005500 | chr6B | 90.258 | 349 | 29 | 5 | 23 | 366 | 25567761 | 25568109 | 9.030000e-123 | 451.0 |
33 | TraesCS1D01G005500 | chr6B | 91.582 | 297 | 24 | 1 | 973 | 1269 | 25569257 | 25569552 | 5.510000e-110 | 409.0 |
34 | TraesCS1D01G005500 | chr6B | 91.176 | 238 | 19 | 2 | 3702 | 3937 | 26529635 | 26529872 | 7.380000e-84 | 322.0 |
35 | TraesCS1D01G005500 | chr6B | 91.538 | 130 | 8 | 2 | 831 | 960 | 25568900 | 25569026 | 6.080000e-40 | 176.0 |
36 | TraesCS1D01G005500 | chr6B | 90.179 | 112 | 11 | 0 | 4758 | 4869 | 20916629 | 20916518 | 4.770000e-31 | 147.0 |
37 | TraesCS1D01G005500 | chr6B | 79.208 | 202 | 38 | 3 | 1063 | 1262 | 25563285 | 25563484 | 2.870000e-28 | 137.0 |
38 | TraesCS1D01G005500 | chr6B | 95.122 | 41 | 2 | 0 | 449 | 489 | 25568105 | 25568145 | 1.370000e-06 | 65.8 |
39 | TraesCS1D01G005500 | chr6B | 97.059 | 34 | 1 | 0 | 3442 | 3475 | 211692057 | 211692024 | 2.300000e-04 | 58.4 |
40 | TraesCS1D01G005500 | chr1A | 84.151 | 713 | 93 | 15 | 5140 | 5841 | 32275120 | 32275823 | 0.000000e+00 | 673.0 |
41 | TraesCS1D01G005500 | chr1A | 90.081 | 494 | 38 | 7 | 4342 | 4827 | 593633677 | 593634167 | 1.080000e-176 | 630.0 |
42 | TraesCS1D01G005500 | chr6D | 85.038 | 655 | 85 | 8 | 5192 | 5845 | 355147196 | 355147838 | 0.000000e+00 | 654.0 |
43 | TraesCS1D01G005500 | chr6D | 89.544 | 526 | 40 | 10 | 4342 | 4857 | 468824492 | 468825012 | 0.000000e+00 | 652.0 |
44 | TraesCS1D01G005500 | chr6D | 88.113 | 530 | 43 | 16 | 4342 | 4857 | 446134919 | 446135442 | 3.910000e-171 | 612.0 |
45 | TraesCS1D01G005500 | chr6D | 89.908 | 109 | 11 | 0 | 4761 | 4869 | 120345124 | 120345016 | 2.220000e-29 | 141.0 |
46 | TraesCS1D01G005500 | chr7D | 90.438 | 502 | 31 | 6 | 4342 | 4827 | 558154179 | 558154679 | 0.000000e+00 | 645.0 |
47 | TraesCS1D01G005500 | chr7D | 84.323 | 657 | 85 | 13 | 5192 | 5845 | 616557872 | 616558513 | 1.400000e-175 | 627.0 |
48 | TraesCS1D01G005500 | chr7D | 93.697 | 238 | 13 | 2 | 3702 | 3937 | 573266314 | 573266551 | 7.280000e-94 | 355.0 |
49 | TraesCS1D01G005500 | chr7D | 92.952 | 227 | 13 | 3 | 3705 | 3929 | 136896956 | 136896731 | 1.590000e-85 | 327.0 |
50 | TraesCS1D01G005500 | chr7B | 82.531 | 727 | 111 | 11 | 5124 | 5840 | 191677225 | 191677945 | 5.030000e-175 | 625.0 |
51 | TraesCS1D01G005500 | chr7B | 83.920 | 653 | 94 | 9 | 5192 | 5841 | 693448786 | 693448142 | 1.090000e-171 | 614.0 |
52 | TraesCS1D01G005500 | chr7B | 83.896 | 652 | 95 | 8 | 5192 | 5841 | 698983463 | 698982820 | 1.090000e-171 | 614.0 |
53 | TraesCS1D01G005500 | chr7B | 95.238 | 42 | 2 | 0 | 3434 | 3475 | 716482390 | 716482349 | 3.820000e-07 | 67.6 |
54 | TraesCS1D01G005500 | chr5D | 89.858 | 493 | 40 | 5 | 4342 | 4827 | 532512021 | 532512510 | 5.030000e-175 | 625.0 |
55 | TraesCS1D01G005500 | chr5D | 92.500 | 40 | 3 | 0 | 3441 | 3480 | 396432669 | 396432630 | 2.300000e-04 | 58.4 |
56 | TraesCS1D01G005500 | chr3D | 88.068 | 528 | 46 | 13 | 4342 | 4857 | 566904599 | 566905121 | 1.410000e-170 | 610.0 |
57 | TraesCS1D01G005500 | chr3D | 87.500 | 536 | 46 | 14 | 4342 | 4857 | 574922341 | 574921807 | 3.050000e-167 | 599.0 |
58 | TraesCS1D01G005500 | chr3D | 92.797 | 236 | 13 | 4 | 3705 | 3937 | 433446673 | 433446439 | 7.330000e-89 | 339.0 |
59 | TraesCS1D01G005500 | chr3D | 91.064 | 235 | 19 | 2 | 3705 | 3937 | 565460425 | 565460191 | 3.440000e-82 | 316.0 |
60 | TraesCS1D01G005500 | chr3D | 89.381 | 113 | 11 | 1 | 4757 | 4869 | 37367952 | 37367841 | 2.220000e-29 | 141.0 |
61 | TraesCS1D01G005500 | chr3D | 78.431 | 153 | 30 | 3 | 1668 | 1819 | 123516565 | 123516415 | 4.870000e-16 | 97.1 |
62 | TraesCS1D01G005500 | chr3D | 97.143 | 35 | 1 | 0 | 3441 | 3475 | 464076816 | 464076782 | 6.390000e-05 | 60.2 |
63 | TraesCS1D01G005500 | chr3B | 88.337 | 523 | 41 | 13 | 4342 | 4857 | 813519152 | 813519661 | 1.410000e-170 | 610.0 |
64 | TraesCS1D01G005500 | chr3B | 79.640 | 722 | 125 | 15 | 5135 | 5845 | 229802474 | 229801764 | 3.180000e-137 | 499.0 |
65 | TraesCS1D01G005500 | chr3A | 82.845 | 682 | 100 | 13 | 5168 | 5845 | 696515998 | 696515330 | 3.940000e-166 | 595.0 |
66 | TraesCS1D01G005500 | chr3A | 80.220 | 728 | 121 | 18 | 5119 | 5841 | 719812397 | 719811688 | 5.240000e-145 | 525.0 |
67 | TraesCS1D01G005500 | chr3A | 92.453 | 106 | 8 | 0 | 4760 | 4865 | 733603944 | 733604049 | 1.030000e-32 | 152.0 |
68 | TraesCS1D01G005500 | chr2B | 79.929 | 847 | 125 | 31 | 996 | 1826 | 16891744 | 16892561 | 1.100000e-161 | 580.0 |
69 | TraesCS1D01G005500 | chr2B | 80.141 | 710 | 123 | 13 | 5145 | 5845 | 572105886 | 572106586 | 1.140000e-141 | 514.0 |
70 | TraesCS1D01G005500 | chr2B | 78.026 | 851 | 140 | 29 | 996 | 1829 | 17351247 | 17350427 | 5.320000e-135 | 492.0 |
71 | TraesCS1D01G005500 | chr4D | 80.985 | 731 | 120 | 11 | 5124 | 5845 | 13046614 | 13047334 | 4.000000e-156 | 562.0 |
72 | TraesCS1D01G005500 | chr2A | 80.301 | 731 | 121 | 18 | 5138 | 5861 | 20156085 | 20155371 | 1.130000e-146 | 531.0 |
73 | TraesCS1D01G005500 | chr7A | 80.567 | 705 | 118 | 14 | 5142 | 5840 | 5619119 | 5619810 | 5.240000e-145 | 525.0 |
74 | TraesCS1D01G005500 | chr4B | 80.058 | 687 | 126 | 7 | 5158 | 5841 | 115089028 | 115088350 | 3.180000e-137 | 499.0 |
75 | TraesCS1D01G005500 | chr2D | 79.683 | 694 | 110 | 23 | 1866 | 2543 | 11083106 | 11083784 | 6.930000e-129 | 472.0 |
76 | TraesCS1D01G005500 | chr2D | 86.000 | 150 | 14 | 7 | 4722 | 4869 | 572689188 | 572689044 | 2.850000e-33 | 154.0 |
77 | TraesCS1D01G005500 | chr1B | 90.638 | 235 | 20 | 2 | 3705 | 3937 | 686406924 | 686406690 | 1.600000e-80 | 311.0 |
78 | TraesCS1D01G005500 | chr4A | 94.393 | 107 | 5 | 1 | 4760 | 4865 | 3331961 | 3332067 | 4.740000e-36 | 163.0 |
79 | TraesCS1D01G005500 | chr4A | 100.000 | 35 | 0 | 0 | 3441 | 3475 | 734949128 | 734949094 | 1.370000e-06 | 65.8 |
80 | TraesCS1D01G005500 | chr4A | 97.059 | 34 | 1 | 0 | 3442 | 3475 | 38748771 | 38748804 | 2.300000e-04 | 58.4 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS1D01G005500 | chr1D | 2504660 | 2510566 | 5906 | False | 5088.000000 | 7284 | 100.000000 | 1 | 5907 | 2 | chr1D.!!$F3 | 5906 |
1 | TraesCS1D01G005500 | chr1D | 338929193 | 338929860 | 667 | False | 603.000000 | 603 | 82.966000 | 5158 | 5837 | 1 | chr1D.!!$F2 | 679 |
2 | TraesCS1D01G005500 | chrUn | 239334807 | 239338365 | 3558 | False | 2746.500000 | 4684 | 93.479500 | 1 | 3680 | 2 | chrUn.!!$F8 | 3679 |
3 | TraesCS1D01G005500 | chrUn | 267858546 | 267862104 | 3558 | False | 2746.500000 | 4684 | 93.479500 | 1 | 3680 | 2 | chrUn.!!$F10 | 3679 |
4 | TraesCS1D01G005500 | chrUn | 267775935 | 267778385 | 2450 | False | 1321.933333 | 3768 | 92.296000 | 515 | 3165 | 3 | chrUn.!!$F9 | 2650 |
5 | TraesCS1D01G005500 | chrUn | 324117702 | 324120152 | 2450 | True | 1321.933333 | 3768 | 92.167333 | 515 | 3165 | 3 | chrUn.!!$R4 | 2650 |
6 | TraesCS1D01G005500 | chrUn | 248330031 | 248331608 | 1577 | False | 915.000000 | 915 | 77.929000 | 996 | 2543 | 1 | chrUn.!!$F6 | 1547 |
7 | TraesCS1D01G005500 | chrUn | 321750963 | 321751474 | 511 | False | 797.000000 | 797 | 94.737000 | 3167 | 3679 | 1 | chrUn.!!$F7 | 512 |
8 | TraesCS1D01G005500 | chrUn | 30374825 | 30375467 | 642 | False | 638.000000 | 638 | 84.580000 | 5192 | 5845 | 1 | chrUn.!!$F3 | 653 |
9 | TraesCS1D01G005500 | chrUn | 260337584 | 260338667 | 1083 | True | 593.000000 | 593 | 77.221000 | 1088 | 2199 | 1 | chrUn.!!$R1 | 1111 |
10 | TraesCS1D01G005500 | chrUn | 307585898 | 307590893 | 4995 | True | 568.500000 | 571 | 79.181000 | 1669 | 2543 | 2 | chrUn.!!$R3 | 874 |
11 | TraesCS1D01G005500 | chrUn | 275587535 | 275589260 | 1725 | False | 355.000000 | 508 | 94.459000 | 1 | 465 | 2 | chrUn.!!$F11 | 464 |
12 | TraesCS1D01G005500 | chr6B | 137427406 | 137428048 | 642 | True | 610.000000 | 610 | 83.792000 | 5192 | 5845 | 1 | chr6B.!!$R2 | 653 |
13 | TraesCS1D01G005500 | chr6B | 25591027 | 25591598 | 571 | False | 532.000000 | 532 | 84.165000 | 2681 | 3236 | 1 | chr6B.!!$F2 | 555 |
14 | TraesCS1D01G005500 | chr6B | 25567761 | 25572684 | 4923 | False | 499.633333 | 1044 | 91.769667 | 23 | 2673 | 6 | chr6B.!!$F4 | 2650 |
15 | TraesCS1D01G005500 | chr1A | 32275120 | 32275823 | 703 | False | 673.000000 | 673 | 84.151000 | 5140 | 5841 | 1 | chr1A.!!$F1 | 701 |
16 | TraesCS1D01G005500 | chr6D | 355147196 | 355147838 | 642 | False | 654.000000 | 654 | 85.038000 | 5192 | 5845 | 1 | chr6D.!!$F1 | 653 |
17 | TraesCS1D01G005500 | chr6D | 468824492 | 468825012 | 520 | False | 652.000000 | 652 | 89.544000 | 4342 | 4857 | 1 | chr6D.!!$F3 | 515 |
18 | TraesCS1D01G005500 | chr6D | 446134919 | 446135442 | 523 | False | 612.000000 | 612 | 88.113000 | 4342 | 4857 | 1 | chr6D.!!$F2 | 515 |
19 | TraesCS1D01G005500 | chr7D | 558154179 | 558154679 | 500 | False | 645.000000 | 645 | 90.438000 | 4342 | 4827 | 1 | chr7D.!!$F1 | 485 |
20 | TraesCS1D01G005500 | chr7D | 616557872 | 616558513 | 641 | False | 627.000000 | 627 | 84.323000 | 5192 | 5845 | 1 | chr7D.!!$F3 | 653 |
21 | TraesCS1D01G005500 | chr7B | 191677225 | 191677945 | 720 | False | 625.000000 | 625 | 82.531000 | 5124 | 5840 | 1 | chr7B.!!$F1 | 716 |
22 | TraesCS1D01G005500 | chr7B | 693448142 | 693448786 | 644 | True | 614.000000 | 614 | 83.920000 | 5192 | 5841 | 1 | chr7B.!!$R1 | 649 |
23 | TraesCS1D01G005500 | chr7B | 698982820 | 698983463 | 643 | True | 614.000000 | 614 | 83.896000 | 5192 | 5841 | 1 | chr7B.!!$R2 | 649 |
24 | TraesCS1D01G005500 | chr3D | 566904599 | 566905121 | 522 | False | 610.000000 | 610 | 88.068000 | 4342 | 4857 | 1 | chr3D.!!$F1 | 515 |
25 | TraesCS1D01G005500 | chr3D | 574921807 | 574922341 | 534 | True | 599.000000 | 599 | 87.500000 | 4342 | 4857 | 1 | chr3D.!!$R6 | 515 |
26 | TraesCS1D01G005500 | chr3B | 813519152 | 813519661 | 509 | False | 610.000000 | 610 | 88.337000 | 4342 | 4857 | 1 | chr3B.!!$F1 | 515 |
27 | TraesCS1D01G005500 | chr3B | 229801764 | 229802474 | 710 | True | 499.000000 | 499 | 79.640000 | 5135 | 5845 | 1 | chr3B.!!$R1 | 710 |
28 | TraesCS1D01G005500 | chr3A | 696515330 | 696515998 | 668 | True | 595.000000 | 595 | 82.845000 | 5168 | 5845 | 1 | chr3A.!!$R1 | 677 |
29 | TraesCS1D01G005500 | chr3A | 719811688 | 719812397 | 709 | True | 525.000000 | 525 | 80.220000 | 5119 | 5841 | 1 | chr3A.!!$R2 | 722 |
30 | TraesCS1D01G005500 | chr2B | 16891744 | 16892561 | 817 | False | 580.000000 | 580 | 79.929000 | 996 | 1826 | 1 | chr2B.!!$F1 | 830 |
31 | TraesCS1D01G005500 | chr2B | 572105886 | 572106586 | 700 | False | 514.000000 | 514 | 80.141000 | 5145 | 5845 | 1 | chr2B.!!$F2 | 700 |
32 | TraesCS1D01G005500 | chr2B | 17350427 | 17351247 | 820 | True | 492.000000 | 492 | 78.026000 | 996 | 1829 | 1 | chr2B.!!$R1 | 833 |
33 | TraesCS1D01G005500 | chr4D | 13046614 | 13047334 | 720 | False | 562.000000 | 562 | 80.985000 | 5124 | 5845 | 1 | chr4D.!!$F1 | 721 |
34 | TraesCS1D01G005500 | chr2A | 20155371 | 20156085 | 714 | True | 531.000000 | 531 | 80.301000 | 5138 | 5861 | 1 | chr2A.!!$R1 | 723 |
35 | TraesCS1D01G005500 | chr7A | 5619119 | 5619810 | 691 | False | 525.000000 | 525 | 80.567000 | 5142 | 5840 | 1 | chr7A.!!$F1 | 698 |
36 | TraesCS1D01G005500 | chr4B | 115088350 | 115089028 | 678 | True | 499.000000 | 499 | 80.058000 | 5158 | 5841 | 1 | chr4B.!!$R1 | 683 |
37 | TraesCS1D01G005500 | chr2D | 11083106 | 11083784 | 678 | False | 472.000000 | 472 | 79.683000 | 1866 | 2543 | 1 | chr2D.!!$F1 | 677 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
280 | 291 | 0.310854 | GTTGCAAGAACGAGGGTTGG | 59.689 | 55.0 | 0.00 | 0.0 | 36.24 | 3.77 | F |
2200 | 8879 | 0.468226 | TCGCCTCACAAGTTTGGTCT | 59.532 | 50.0 | 0.00 | 0.0 | 0.00 | 3.85 | F |
2544 | 9236 | 0.182537 | CAAAGGGGCCATATCGACCA | 59.817 | 55.0 | 4.39 | 0.0 | 0.00 | 4.02 | F |
3733 | 10463 | 0.182775 | AAACAGGGCTTTCGTCCACT | 59.817 | 50.0 | 0.00 | 0.0 | 37.38 | 4.00 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2262 | 8947 | 1.333619 | CAACTGTCAACCACCTTTCCG | 59.666 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 | R |
3905 | 10636 | 0.248949 | GTCCCGGCTTGAGATACGAC | 60.249 | 60.000 | 0.00 | 0.00 | 0.00 | 4.34 | R |
3910 | 10641 | 2.467880 | TCTTTAGTCCCGGCTTGAGAT | 58.532 | 47.619 | 0.00 | 0.00 | 0.00 | 2.75 | R |
5541 | 12346 | 0.040351 | AGTACTGAGGCTGAGGCTGA | 59.960 | 55.000 | 15.18 | 3.44 | 38.98 | 4.26 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
73 | 74 | 2.685388 | TGTTTCGAAAGGTGAATGTGCA | 59.315 | 40.909 | 11.66 | 0.00 | 0.00 | 4.57 |
156 | 157 | 1.336887 | GCTGCACCTTCTTCGTCTACA | 60.337 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
280 | 291 | 0.310854 | GTTGCAAGAACGAGGGTTGG | 59.689 | 55.000 | 0.00 | 0.00 | 36.24 | 3.77 |
373 | 384 | 3.347216 | ACTGGTGCCTATGACAATGAAC | 58.653 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
489 | 500 | 8.824756 | TTCTAGTCAAGTCCTGATGTATACTT | 57.175 | 34.615 | 4.17 | 0.00 | 36.14 | 2.24 |
495 | 697 | 9.220767 | GTCAAGTCCTGATGTATACTTCTTTTT | 57.779 | 33.333 | 17.02 | 5.17 | 36.14 | 1.94 |
519 | 721 | 8.956533 | TTTTAAGGAAAAGGAACATTTCTTGG | 57.043 | 30.769 | 0.00 | 0.00 | 44.32 | 3.61 |
589 | 806 | 6.688637 | GGTACCCAACATAATGGACTTAAC | 57.311 | 41.667 | 0.00 | 0.00 | 43.54 | 2.01 |
590 | 807 | 5.295045 | GGTACCCAACATAATGGACTTAACG | 59.705 | 44.000 | 0.00 | 0.00 | 43.54 | 3.18 |
591 | 808 | 4.913784 | ACCCAACATAATGGACTTAACGT | 58.086 | 39.130 | 0.00 | 0.00 | 43.54 | 3.99 |
592 | 809 | 4.698304 | ACCCAACATAATGGACTTAACGTG | 59.302 | 41.667 | 0.00 | 0.00 | 43.54 | 4.49 |
593 | 810 | 4.438200 | CCCAACATAATGGACTTAACGTGC | 60.438 | 45.833 | 0.00 | 0.00 | 43.54 | 5.34 |
594 | 811 | 4.394920 | CCAACATAATGGACTTAACGTGCT | 59.605 | 41.667 | 0.00 | 0.00 | 43.54 | 4.40 |
595 | 812 | 5.447279 | CCAACATAATGGACTTAACGTGCTC | 60.447 | 44.000 | 0.00 | 0.00 | 43.54 | 4.26 |
596 | 813 | 4.827692 | ACATAATGGACTTAACGTGCTCA | 58.172 | 39.130 | 0.00 | 0.00 | 34.66 | 4.26 |
597 | 814 | 5.242434 | ACATAATGGACTTAACGTGCTCAA | 58.758 | 37.500 | 0.00 | 0.00 | 34.66 | 3.02 |
598 | 815 | 5.351465 | ACATAATGGACTTAACGTGCTCAAG | 59.649 | 40.000 | 0.00 | 0.00 | 34.66 | 3.02 |
599 | 816 | 2.902705 | TGGACTTAACGTGCTCAAGT | 57.097 | 45.000 | 0.00 | 0.00 | 35.27 | 3.16 |
600 | 817 | 2.750948 | TGGACTTAACGTGCTCAAGTC | 58.249 | 47.619 | 17.59 | 17.59 | 44.78 | 3.01 |
602 | 819 | 3.027974 | GACTTAACGTGCTCAAGTCCT | 57.972 | 47.619 | 16.06 | 0.00 | 41.40 | 3.85 |
603 | 820 | 2.731976 | GACTTAACGTGCTCAAGTCCTG | 59.268 | 50.000 | 16.06 | 0.00 | 41.40 | 3.86 |
604 | 821 | 2.364324 | ACTTAACGTGCTCAAGTCCTGA | 59.636 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
605 | 822 | 3.006967 | ACTTAACGTGCTCAAGTCCTGAT | 59.993 | 43.478 | 0.00 | 0.00 | 32.14 | 2.90 |
606 | 823 | 1.800805 | AACGTGCTCAAGTCCTGATG | 58.199 | 50.000 | 0.00 | 0.00 | 32.14 | 3.07 |
607 | 824 | 0.681733 | ACGTGCTCAAGTCCTGATGT | 59.318 | 50.000 | 0.00 | 0.00 | 32.14 | 3.06 |
608 | 825 | 1.893137 | ACGTGCTCAAGTCCTGATGTA | 59.107 | 47.619 | 0.00 | 0.00 | 32.14 | 2.29 |
609 | 826 | 2.497675 | ACGTGCTCAAGTCCTGATGTAT | 59.502 | 45.455 | 0.00 | 0.00 | 32.14 | 2.29 |
610 | 827 | 3.699538 | ACGTGCTCAAGTCCTGATGTATA | 59.300 | 43.478 | 0.00 | 0.00 | 32.14 | 1.47 |
611 | 828 | 4.045104 | CGTGCTCAAGTCCTGATGTATAC | 58.955 | 47.826 | 0.00 | 0.00 | 32.14 | 1.47 |
612 | 829 | 4.202060 | CGTGCTCAAGTCCTGATGTATACT | 60.202 | 45.833 | 4.17 | 0.00 | 32.14 | 2.12 |
613 | 830 | 5.665459 | GTGCTCAAGTCCTGATGTATACTT | 58.335 | 41.667 | 4.17 | 0.00 | 32.14 | 2.24 |
614 | 831 | 5.751028 | GTGCTCAAGTCCTGATGTATACTTC | 59.249 | 44.000 | 10.98 | 10.98 | 32.14 | 3.01 |
615 | 832 | 5.658634 | TGCTCAAGTCCTGATGTATACTTCT | 59.341 | 40.000 | 17.02 | 0.00 | 32.14 | 2.85 |
616 | 833 | 6.155221 | TGCTCAAGTCCTGATGTATACTTCTT | 59.845 | 38.462 | 17.02 | 3.28 | 32.14 | 2.52 |
617 | 834 | 7.044798 | GCTCAAGTCCTGATGTATACTTCTTT | 58.955 | 38.462 | 17.02 | 4.65 | 32.14 | 2.52 |
618 | 835 | 7.550906 | GCTCAAGTCCTGATGTATACTTCTTTT | 59.449 | 37.037 | 17.02 | 4.91 | 32.14 | 2.27 |
619 | 836 | 9.442047 | CTCAAGTCCTGATGTATACTTCTTTTT | 57.558 | 33.333 | 17.02 | 5.17 | 32.14 | 1.94 |
620 | 837 | 9.219603 | TCAAGTCCTGATGTATACTTCTTTTTG | 57.780 | 33.333 | 17.02 | 13.64 | 29.93 | 2.44 |
621 | 838 | 9.003658 | CAAGTCCTGATGTATACTTCTTTTTGT | 57.996 | 33.333 | 17.02 | 0.52 | 29.93 | 2.83 |
622 | 839 | 9.574516 | AAGTCCTGATGTATACTTCTTTTTGTT | 57.425 | 29.630 | 17.02 | 4.54 | 0.00 | 2.83 |
623 | 840 | 9.574516 | AGTCCTGATGTATACTTCTTTTTGTTT | 57.425 | 29.630 | 17.02 | 0.00 | 0.00 | 2.83 |
712 | 929 | 3.934068 | ACCGATGGATTTGACTTAACGT | 58.066 | 40.909 | 0.00 | 0.00 | 0.00 | 3.99 |
739 | 956 | 2.643551 | CCCAACTGCACCGATTAGAAT | 58.356 | 47.619 | 0.00 | 0.00 | 0.00 | 2.40 |
836 | 1340 | 6.274200 | ACAGATAGGAAGCCATTCATTAGGAT | 59.726 | 38.462 | 0.00 | 0.00 | 37.15 | 3.24 |
978 | 1482 | 1.079127 | CACGTCGGGCTCTTTCCAT | 60.079 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
989 | 1710 | 2.223665 | GCTCTTTCCATATTGCCTGTGC | 60.224 | 50.000 | 0.00 | 0.00 | 38.26 | 4.57 |
1020 | 1741 | 0.735978 | TGCACAAGCTCGTATCCGTG | 60.736 | 55.000 | 0.00 | 0.00 | 42.74 | 4.94 |
1036 | 1763 | 1.275291 | CCGTGGCTTTCCTAGTCTTCA | 59.725 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
1074 | 1801 | 2.362120 | GTCTCTTCCCCGTCCGGA | 60.362 | 66.667 | 0.00 | 0.00 | 37.50 | 5.14 |
1710 | 4175 | 1.573108 | TCGGCAGATCCCTCTTCTTT | 58.427 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
1895 | 4408 | 4.166725 | TCCAAGCAGGATCCATGATAAACT | 59.833 | 41.667 | 15.82 | 0.00 | 43.07 | 2.66 |
1979 | 4502 | 1.326951 | TGATTCCGTCGGGATGCTCA | 61.327 | 55.000 | 10.64 | 0.00 | 43.41 | 4.26 |
2200 | 8879 | 0.468226 | TCGCCTCACAAGTTTGGTCT | 59.532 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2324 | 9014 | 4.033019 | GGTTTTGAACAAGACGTGCTTAC | 58.967 | 43.478 | 0.00 | 0.00 | 34.31 | 2.34 |
2544 | 9236 | 0.182537 | CAAAGGGGCCATATCGACCA | 59.817 | 55.000 | 4.39 | 0.00 | 0.00 | 4.02 |
2548 | 9240 | 1.529796 | GGGCCATATCGACCAACCA | 59.470 | 57.895 | 4.39 | 0.00 | 0.00 | 3.67 |
2574 | 9266 | 5.915196 | GTGAAAAACTCATTTCTACTGTGGC | 59.085 | 40.000 | 0.00 | 0.00 | 39.51 | 5.01 |
2827 | 9538 | 7.248743 | AGATCCATTCCACAACAATTTCAAT | 57.751 | 32.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2958 | 9671 | 4.157840 | AGACCCACTTCACAAAAAGTCAAC | 59.842 | 41.667 | 0.00 | 0.00 | 37.38 | 3.18 |
2960 | 9673 | 3.434637 | CCACTTCACAAAAAGTCAACCG | 58.565 | 45.455 | 0.00 | 0.00 | 37.38 | 4.44 |
3238 | 9967 | 3.297134 | AACCCATCGATAAGCCACAAT | 57.703 | 42.857 | 0.00 | 0.00 | 0.00 | 2.71 |
3284 | 10013 | 6.228273 | AGTTGTACATGATTGTTCGTTCAG | 57.772 | 37.500 | 0.00 | 0.00 | 37.28 | 3.02 |
3325 | 10054 | 6.611381 | TCAGTATTGATGTTAAACAAGCTGC | 58.389 | 36.000 | 0.00 | 0.00 | 35.31 | 5.25 |
3345 | 10074 | 0.391130 | AATTGCTTGCATGCAGCTGG | 60.391 | 50.000 | 29.43 | 19.37 | 44.27 | 4.85 |
3366 | 10095 | 6.352016 | TGGGCTACATAAATTTGCTTTGAA | 57.648 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
3387 | 10116 | 3.820557 | ACGGGTAGCATTAAATGAGCAT | 58.179 | 40.909 | 0.00 | 0.00 | 0.00 | 3.79 |
3598 | 10327 | 2.353579 | GACGGTGGTGGTGTATTATTGC | 59.646 | 50.000 | 0.00 | 0.00 | 0.00 | 3.56 |
3623 | 10352 | 7.590322 | GCTGTCAATATAATGAAGTGAATGCAG | 59.410 | 37.037 | 0.00 | 0.00 | 0.00 | 4.41 |
3632 | 10361 | 3.004002 | TGAAGTGAATGCAGCTGTTTCTG | 59.996 | 43.478 | 23.27 | 0.00 | 37.15 | 3.02 |
3636 | 10365 | 3.748048 | GTGAATGCAGCTGTTTCTGTCTA | 59.252 | 43.478 | 23.27 | 8.08 | 36.49 | 2.59 |
3637 | 10366 | 4.214119 | GTGAATGCAGCTGTTTCTGTCTAA | 59.786 | 41.667 | 23.27 | 7.56 | 36.49 | 2.10 |
3680 | 10410 | 1.682087 | GCGCATCTTTCCCCTAAACCT | 60.682 | 52.381 | 0.30 | 0.00 | 0.00 | 3.50 |
3681 | 10411 | 2.723273 | CGCATCTTTCCCCTAAACCTT | 58.277 | 47.619 | 0.00 | 0.00 | 0.00 | 3.50 |
3682 | 10412 | 2.683362 | CGCATCTTTCCCCTAAACCTTC | 59.317 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
3683 | 10413 | 3.024547 | GCATCTTTCCCCTAAACCTTCC | 58.975 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
3684 | 10414 | 3.279434 | CATCTTTCCCCTAAACCTTCCG | 58.721 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3685 | 10415 | 1.631898 | TCTTTCCCCTAAACCTTCCGG | 59.368 | 52.381 | 0.00 | 0.00 | 0.00 | 5.14 |
3697 | 10427 | 3.292492 | ACCTTCCGGTTTCAAAAGTCT | 57.708 | 42.857 | 0.00 | 0.00 | 42.13 | 3.24 |
3698 | 10428 | 3.211865 | ACCTTCCGGTTTCAAAAGTCTC | 58.788 | 45.455 | 0.00 | 0.00 | 42.13 | 3.36 |
3699 | 10429 | 3.118000 | ACCTTCCGGTTTCAAAAGTCTCT | 60.118 | 43.478 | 0.00 | 0.00 | 42.13 | 3.10 |
3700 | 10430 | 4.102054 | ACCTTCCGGTTTCAAAAGTCTCTA | 59.898 | 41.667 | 0.00 | 0.00 | 42.13 | 2.43 |
3701 | 10431 | 5.221864 | ACCTTCCGGTTTCAAAAGTCTCTAT | 60.222 | 40.000 | 0.00 | 0.00 | 42.13 | 1.98 |
3702 | 10432 | 5.705905 | CCTTCCGGTTTCAAAAGTCTCTATT | 59.294 | 40.000 | 0.00 | 0.00 | 0.00 | 1.73 |
3703 | 10433 | 6.206829 | CCTTCCGGTTTCAAAAGTCTCTATTT | 59.793 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
3731 | 10461 | 1.770294 | AAAAACAGGGCTTTCGTCCA | 58.230 | 45.000 | 0.00 | 0.00 | 37.38 | 4.02 |
3733 | 10463 | 0.182775 | AAACAGGGCTTTCGTCCACT | 59.817 | 50.000 | 0.00 | 0.00 | 37.38 | 4.00 |
3734 | 10464 | 0.250338 | AACAGGGCTTTCGTCCACTC | 60.250 | 55.000 | 0.00 | 0.00 | 37.38 | 3.51 |
3735 | 10465 | 1.376037 | CAGGGCTTTCGTCCACTCC | 60.376 | 63.158 | 0.00 | 0.00 | 37.38 | 3.85 |
3740 | 10470 | 0.804989 | GCTTTCGTCCACTCCCAATG | 59.195 | 55.000 | 0.00 | 0.00 | 0.00 | 2.82 |
3742 | 10472 | 2.614481 | GCTTTCGTCCACTCCCAATGTA | 60.614 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
3762 | 10492 | 1.004277 | ACACATTAGTCCCGGTTGCAT | 59.996 | 47.619 | 0.00 | 0.00 | 0.00 | 3.96 |
3763 | 10493 | 2.091541 | CACATTAGTCCCGGTTGCATT | 58.908 | 47.619 | 0.00 | 0.00 | 0.00 | 3.56 |
3765 | 10495 | 3.064820 | CACATTAGTCCCGGTTGCATTAC | 59.935 | 47.826 | 0.00 | 0.00 | 0.00 | 1.89 |
3766 | 10496 | 2.012937 | TTAGTCCCGGTTGCATTACG | 57.987 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3767 | 10497 | 1.184431 | TAGTCCCGGTTGCATTACGA | 58.816 | 50.000 | 0.00 | 0.00 | 0.00 | 3.43 |
3768 | 10498 | 0.322322 | AGTCCCGGTTGCATTACGAA | 59.678 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3769 | 10499 | 0.445043 | GTCCCGGTTGCATTACGAAC | 59.555 | 55.000 | 0.00 | 2.18 | 0.00 | 3.95 |
3782 | 10512 | 2.945447 | TACGAACCGGGACTAATGTG | 57.055 | 50.000 | 6.32 | 0.00 | 0.00 | 3.21 |
3811 | 10541 | 4.570663 | CGGTTCGAGCGGCTAGGG | 62.571 | 72.222 | 0.60 | 0.00 | 35.16 | 3.53 |
3812 | 10542 | 4.893601 | GGTTCGAGCGGCTAGGGC | 62.894 | 72.222 | 0.60 | 0.00 | 37.82 | 5.19 |
3842 | 10572 | 2.617021 | GCCTTAGTCCCGGTTCAAATGA | 60.617 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3843 | 10573 | 3.270877 | CCTTAGTCCCGGTTCAAATGAG | 58.729 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3844 | 10574 | 3.055385 | CCTTAGTCCCGGTTCAAATGAGA | 60.055 | 47.826 | 0.00 | 0.00 | 0.00 | 3.27 |
3873 | 10603 | 2.372690 | CGGCTTGAGACACGAACCG | 61.373 | 63.158 | 0.00 | 0.00 | 35.68 | 4.44 |
3903 | 10634 | 1.095807 | GTGCGATGCCCTTTAGTCCC | 61.096 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
3905 | 10636 | 1.227556 | CGATGCCCTTTAGTCCCGG | 60.228 | 63.158 | 0.00 | 0.00 | 0.00 | 5.73 |
3910 | 10641 | 1.322538 | GCCCTTTAGTCCCGGTCGTA | 61.323 | 60.000 | 0.00 | 0.00 | 0.00 | 3.43 |
3917 | 10648 | 1.390565 | AGTCCCGGTCGTATCTCAAG | 58.609 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
3918 | 10649 | 0.248949 | GTCCCGGTCGTATCTCAAGC | 60.249 | 60.000 | 0.00 | 0.00 | 0.00 | 4.01 |
3930 | 10661 | 1.933021 | TCTCAAGCCGGGACTAAAGA | 58.067 | 50.000 | 2.18 | 0.00 | 0.00 | 2.52 |
3931 | 10662 | 2.467880 | TCTCAAGCCGGGACTAAAGAT | 58.532 | 47.619 | 2.18 | 0.00 | 0.00 | 2.40 |
3932 | 10663 | 2.838202 | TCTCAAGCCGGGACTAAAGATT | 59.162 | 45.455 | 2.18 | 0.00 | 0.00 | 2.40 |
3933 | 10664 | 4.028131 | TCTCAAGCCGGGACTAAAGATTA | 58.972 | 43.478 | 2.18 | 0.00 | 0.00 | 1.75 |
3934 | 10665 | 4.099573 | TCTCAAGCCGGGACTAAAGATTAG | 59.900 | 45.833 | 2.18 | 0.00 | 0.00 | 1.73 |
3936 | 10667 | 4.120589 | CAAGCCGGGACTAAAGATTAGAC | 58.879 | 47.826 | 2.18 | 0.00 | 0.00 | 2.59 |
3938 | 10669 | 3.385111 | AGCCGGGACTAAAGATTAGACTG | 59.615 | 47.826 | 2.18 | 2.49 | 0.00 | 3.51 |
3939 | 10670 | 3.383825 | GCCGGGACTAAAGATTAGACTGA | 59.616 | 47.826 | 2.18 | 0.00 | 0.00 | 3.41 |
3941 | 10672 | 5.533482 | CCGGGACTAAAGATTAGACTGATG | 58.467 | 45.833 | 0.00 | 0.00 | 0.00 | 3.07 |
3942 | 10673 | 5.069251 | CCGGGACTAAAGATTAGACTGATGT | 59.931 | 44.000 | 0.00 | 0.00 | 0.00 | 3.06 |
4505 | 11237 | 8.333186 | AGTGTGATCAAAAAGTAAAACGACTAC | 58.667 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
4518 | 11250 | 9.162764 | AGTAAAACGACTACATCTTTTGCATAT | 57.837 | 29.630 | 0.00 | 0.00 | 29.67 | 1.78 |
4877 | 11665 | 8.654230 | TTATTTCAGTTTTATTGCAGCAAACA | 57.346 | 26.923 | 12.97 | 0.00 | 33.58 | 2.83 |
4878 | 11666 | 6.974932 | TTTCAGTTTTATTGCAGCAAACAA | 57.025 | 29.167 | 12.97 | 6.68 | 33.58 | 2.83 |
4879 | 11667 | 6.586868 | TTCAGTTTTATTGCAGCAAACAAG | 57.413 | 33.333 | 12.97 | 3.21 | 33.58 | 3.16 |
4880 | 11668 | 5.900425 | TCAGTTTTATTGCAGCAAACAAGA | 58.100 | 33.333 | 12.97 | 5.48 | 33.58 | 3.02 |
4881 | 11669 | 6.514947 | TCAGTTTTATTGCAGCAAACAAGAT | 58.485 | 32.000 | 12.97 | 0.00 | 33.58 | 2.40 |
4882 | 11670 | 7.656412 | TCAGTTTTATTGCAGCAAACAAGATA | 58.344 | 30.769 | 12.97 | 0.00 | 33.58 | 1.98 |
4883 | 11671 | 8.140628 | TCAGTTTTATTGCAGCAAACAAGATAA | 58.859 | 29.630 | 12.97 | 2.13 | 33.58 | 1.75 |
4884 | 11672 | 8.763356 | CAGTTTTATTGCAGCAAACAAGATAAA | 58.237 | 29.630 | 12.97 | 8.45 | 33.58 | 1.40 |
4885 | 11673 | 9.323985 | AGTTTTATTGCAGCAAACAAGATAAAA | 57.676 | 25.926 | 12.97 | 13.72 | 33.58 | 1.52 |
4886 | 11674 | 9.368921 | GTTTTATTGCAGCAAACAAGATAAAAC | 57.631 | 29.630 | 23.68 | 23.68 | 36.42 | 2.43 |
4887 | 11675 | 8.654230 | TTTATTGCAGCAAACAAGATAAAACA | 57.346 | 26.923 | 12.97 | 0.00 | 0.00 | 2.83 |
4888 | 11676 | 8.830201 | TTATTGCAGCAAACAAGATAAAACAT | 57.170 | 26.923 | 12.97 | 0.00 | 0.00 | 2.71 |
4889 | 11677 | 6.768029 | TTGCAGCAAACAAGATAAAACATC | 57.232 | 33.333 | 4.99 | 0.00 | 0.00 | 3.06 |
4890 | 11678 | 6.088016 | TGCAGCAAACAAGATAAAACATCT | 57.912 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
4891 | 11679 | 6.151691 | TGCAGCAAACAAGATAAAACATCTC | 58.848 | 36.000 | 0.00 | 0.00 | 0.00 | 2.75 |
4892 | 11680 | 5.284660 | GCAGCAAACAAGATAAAACATCTCG | 59.715 | 40.000 | 0.00 | 0.00 | 0.00 | 4.04 |
4893 | 11681 | 6.602179 | CAGCAAACAAGATAAAACATCTCGA | 58.398 | 36.000 | 0.00 | 0.00 | 0.00 | 4.04 |
4894 | 11682 | 7.077605 | CAGCAAACAAGATAAAACATCTCGAA | 58.922 | 34.615 | 0.00 | 0.00 | 0.00 | 3.71 |
4895 | 11683 | 7.591057 | CAGCAAACAAGATAAAACATCTCGAAA | 59.409 | 33.333 | 0.00 | 0.00 | 0.00 | 3.46 |
4896 | 11684 | 7.805071 | AGCAAACAAGATAAAACATCTCGAAAG | 59.195 | 33.333 | 0.00 | 0.00 | 0.00 | 2.62 |
4897 | 11685 | 7.803189 | GCAAACAAGATAAAACATCTCGAAAGA | 59.197 | 33.333 | 0.00 | 0.00 | 39.12 | 2.52 |
4898 | 11686 | 9.831737 | CAAACAAGATAAAACATCTCGAAAGAT | 57.168 | 29.630 | 0.00 | 0.00 | 43.24 | 2.40 |
4900 | 11688 | 9.831737 | AACAAGATAAAACATCTCGAAAGATTG | 57.168 | 29.630 | 0.00 | 0.00 | 40.38 | 2.67 |
4901 | 11689 | 8.454106 | ACAAGATAAAACATCTCGAAAGATTGG | 58.546 | 33.333 | 0.00 | 0.00 | 40.38 | 3.16 |
4902 | 11690 | 7.559590 | AGATAAAACATCTCGAAAGATTGGG | 57.440 | 36.000 | 0.00 | 0.00 | 40.38 | 4.12 |
4903 | 11691 | 6.543831 | AGATAAAACATCTCGAAAGATTGGGG | 59.456 | 38.462 | 0.00 | 0.00 | 40.38 | 4.96 |
4904 | 11692 | 3.721087 | AACATCTCGAAAGATTGGGGT | 57.279 | 42.857 | 0.00 | 0.00 | 40.38 | 4.95 |
4905 | 11693 | 4.837093 | AACATCTCGAAAGATTGGGGTA | 57.163 | 40.909 | 0.00 | 0.00 | 40.38 | 3.69 |
4906 | 11694 | 4.408182 | ACATCTCGAAAGATTGGGGTAG | 57.592 | 45.455 | 0.00 | 0.00 | 40.38 | 3.18 |
4907 | 11695 | 3.775316 | ACATCTCGAAAGATTGGGGTAGT | 59.225 | 43.478 | 0.00 | 0.00 | 40.38 | 2.73 |
4908 | 11696 | 3.887621 | TCTCGAAAGATTGGGGTAGTG | 57.112 | 47.619 | 0.00 | 0.00 | 40.84 | 2.74 |
4909 | 11697 | 3.170717 | TCTCGAAAGATTGGGGTAGTGT | 58.829 | 45.455 | 0.00 | 0.00 | 40.84 | 3.55 |
4910 | 11698 | 3.581332 | TCTCGAAAGATTGGGGTAGTGTT | 59.419 | 43.478 | 0.00 | 0.00 | 40.84 | 3.32 |
4911 | 11699 | 3.670625 | TCGAAAGATTGGGGTAGTGTTG | 58.329 | 45.455 | 0.00 | 0.00 | 33.31 | 3.33 |
4912 | 11700 | 2.747446 | CGAAAGATTGGGGTAGTGTTGG | 59.253 | 50.000 | 0.00 | 0.00 | 0.00 | 3.77 |
4913 | 11701 | 3.558321 | CGAAAGATTGGGGTAGTGTTGGA | 60.558 | 47.826 | 0.00 | 0.00 | 0.00 | 3.53 |
4914 | 11702 | 4.403734 | GAAAGATTGGGGTAGTGTTGGAA | 58.596 | 43.478 | 0.00 | 0.00 | 0.00 | 3.53 |
4915 | 11703 | 3.721087 | AGATTGGGGTAGTGTTGGAAG | 57.279 | 47.619 | 0.00 | 0.00 | 0.00 | 3.46 |
4916 | 11704 | 2.092323 | GATTGGGGTAGTGTTGGAAGC | 58.908 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
4917 | 11705 | 0.250553 | TTGGGGTAGTGTTGGAAGCG | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 4.68 |
4918 | 11706 | 1.122632 | TGGGGTAGTGTTGGAAGCGA | 61.123 | 55.000 | 0.00 | 0.00 | 0.00 | 4.93 |
4919 | 11707 | 0.672711 | GGGGTAGTGTTGGAAGCGAC | 60.673 | 60.000 | 0.00 | 0.00 | 0.00 | 5.19 |
4920 | 11708 | 0.672711 | GGGTAGTGTTGGAAGCGACC | 60.673 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4921 | 11709 | 1.012486 | GGTAGTGTTGGAAGCGACCG | 61.012 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
4922 | 11710 | 1.012486 | GTAGTGTTGGAAGCGACCGG | 61.012 | 60.000 | 0.00 | 0.00 | 0.00 | 5.28 |
4923 | 11711 | 1.180456 | TAGTGTTGGAAGCGACCGGA | 61.180 | 55.000 | 9.46 | 0.00 | 0.00 | 5.14 |
4924 | 11712 | 1.375523 | GTGTTGGAAGCGACCGGAT | 60.376 | 57.895 | 9.46 | 0.00 | 0.00 | 4.18 |
4925 | 11713 | 1.375396 | TGTTGGAAGCGACCGGATG | 60.375 | 57.895 | 9.46 | 0.00 | 0.00 | 3.51 |
4926 | 11714 | 1.375523 | GTTGGAAGCGACCGGATGT | 60.376 | 57.895 | 9.46 | 0.00 | 0.00 | 3.06 |
4927 | 11715 | 0.953960 | GTTGGAAGCGACCGGATGTT | 60.954 | 55.000 | 9.46 | 0.00 | 0.00 | 2.71 |
4928 | 11716 | 0.672401 | TTGGAAGCGACCGGATGTTC | 60.672 | 55.000 | 9.46 | 5.22 | 0.00 | 3.18 |
4929 | 11717 | 1.218316 | GGAAGCGACCGGATGTTCT | 59.782 | 57.895 | 9.46 | 0.00 | 0.00 | 3.01 |
4930 | 11718 | 0.391263 | GGAAGCGACCGGATGTTCTT | 60.391 | 55.000 | 9.46 | 3.54 | 0.00 | 2.52 |
4931 | 11719 | 0.721718 | GAAGCGACCGGATGTTCTTG | 59.278 | 55.000 | 9.46 | 0.00 | 0.00 | 3.02 |
4932 | 11720 | 1.298859 | AAGCGACCGGATGTTCTTGC | 61.299 | 55.000 | 9.46 | 0.00 | 0.00 | 4.01 |
4933 | 11721 | 2.032634 | GCGACCGGATGTTCTTGCA | 61.033 | 57.895 | 9.46 | 0.00 | 0.00 | 4.08 |
4934 | 11722 | 1.369091 | GCGACCGGATGTTCTTGCAT | 61.369 | 55.000 | 9.46 | 0.00 | 0.00 | 3.96 |
4935 | 11723 | 0.652592 | CGACCGGATGTTCTTGCATC | 59.347 | 55.000 | 9.46 | 0.00 | 43.22 | 3.91 |
4945 | 11733 | 6.297694 | GATGTTCTTGCATCCTCTATTCAC | 57.702 | 41.667 | 0.00 | 0.00 | 39.33 | 3.18 |
4946 | 11734 | 4.517285 | TGTTCTTGCATCCTCTATTCACC | 58.483 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
4947 | 11735 | 4.019411 | TGTTCTTGCATCCTCTATTCACCA | 60.019 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
4948 | 11736 | 4.412796 | TCTTGCATCCTCTATTCACCAG | 57.587 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
4949 | 11737 | 3.776969 | TCTTGCATCCTCTATTCACCAGT | 59.223 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
4950 | 11738 | 3.548745 | TGCATCCTCTATTCACCAGTG | 57.451 | 47.619 | 0.00 | 0.00 | 0.00 | 3.66 |
4951 | 11739 | 3.106827 | TGCATCCTCTATTCACCAGTGA | 58.893 | 45.455 | 0.00 | 0.00 | 37.91 | 3.41 |
4952 | 11740 | 3.118629 | TGCATCCTCTATTCACCAGTGAC | 60.119 | 47.826 | 0.00 | 0.00 | 39.66 | 3.67 |
4953 | 11741 | 3.711086 | CATCCTCTATTCACCAGTGACG | 58.289 | 50.000 | 0.00 | 0.00 | 39.66 | 4.35 |
4954 | 11742 | 2.803956 | TCCTCTATTCACCAGTGACGT | 58.196 | 47.619 | 0.00 | 0.00 | 39.66 | 4.34 |
4955 | 11743 | 2.492088 | TCCTCTATTCACCAGTGACGTG | 59.508 | 50.000 | 0.00 | 0.00 | 39.66 | 4.49 |
4956 | 11744 | 2.492088 | CCTCTATTCACCAGTGACGTGA | 59.508 | 50.000 | 0.00 | 0.00 | 39.66 | 4.35 |
4957 | 11745 | 3.428180 | CCTCTATTCACCAGTGACGTGAG | 60.428 | 52.174 | 0.00 | 7.79 | 41.10 | 3.51 |
4958 | 11746 | 2.492088 | TCTATTCACCAGTGACGTGAGG | 59.508 | 50.000 | 0.00 | 0.00 | 41.10 | 3.86 |
4959 | 11747 | 1.048601 | ATTCACCAGTGACGTGAGGT | 58.951 | 50.000 | 0.00 | 0.00 | 41.10 | 3.85 |
4960 | 11748 | 4.343581 | CACCAGTGACGTGAGGTG | 57.656 | 61.111 | 0.00 | 1.29 | 44.72 | 4.00 |
4961 | 11749 | 1.956170 | CACCAGTGACGTGAGGTGC | 60.956 | 63.158 | 10.99 | 0.00 | 44.25 | 5.01 |
4962 | 11750 | 2.134287 | ACCAGTGACGTGAGGTGCT | 61.134 | 57.895 | 0.00 | 0.00 | 32.04 | 4.40 |
4963 | 11751 | 1.373497 | CCAGTGACGTGAGGTGCTC | 60.373 | 63.158 | 0.00 | 0.00 | 0.00 | 4.26 |
4964 | 11752 | 1.373497 | CAGTGACGTGAGGTGCTCC | 60.373 | 63.158 | 0.00 | 0.00 | 0.00 | 4.70 |
4965 | 11753 | 1.832608 | AGTGACGTGAGGTGCTCCA | 60.833 | 57.895 | 7.70 | 0.00 | 35.89 | 3.86 |
4966 | 11754 | 1.664965 | GTGACGTGAGGTGCTCCAC | 60.665 | 63.158 | 7.70 | 0.87 | 35.89 | 4.02 |
4967 | 11755 | 2.131067 | TGACGTGAGGTGCTCCACA | 61.131 | 57.895 | 7.70 | 3.98 | 35.86 | 4.17 |
4968 | 11756 | 1.293498 | GACGTGAGGTGCTCCACAT | 59.707 | 57.895 | 8.19 | 0.00 | 36.76 | 3.21 |
4969 | 11757 | 0.320771 | GACGTGAGGTGCTCCACATT | 60.321 | 55.000 | 8.19 | 0.00 | 36.76 | 2.71 |
4970 | 11758 | 0.108585 | ACGTGAGGTGCTCCACATTT | 59.891 | 50.000 | 8.19 | 0.00 | 36.76 | 2.32 |
4971 | 11759 | 1.238439 | CGTGAGGTGCTCCACATTTT | 58.762 | 50.000 | 8.19 | 0.00 | 36.76 | 1.82 |
4972 | 11760 | 1.069022 | CGTGAGGTGCTCCACATTTTG | 60.069 | 52.381 | 8.19 | 0.00 | 36.76 | 2.44 |
4973 | 11761 | 2.229792 | GTGAGGTGCTCCACATTTTGA | 58.770 | 47.619 | 8.19 | 0.00 | 36.76 | 2.69 |
4974 | 11762 | 2.227388 | GTGAGGTGCTCCACATTTTGAG | 59.773 | 50.000 | 8.19 | 0.00 | 36.76 | 3.02 |
4975 | 11763 | 1.815003 | GAGGTGCTCCACATTTTGAGG | 59.185 | 52.381 | 7.70 | 0.00 | 35.86 | 3.86 |
4976 | 11764 | 1.145738 | AGGTGCTCCACATTTTGAGGT | 59.854 | 47.619 | 7.70 | 0.00 | 35.86 | 3.85 |
4977 | 11765 | 2.375174 | AGGTGCTCCACATTTTGAGGTA | 59.625 | 45.455 | 7.70 | 0.00 | 35.86 | 3.08 |
4978 | 11766 | 3.153919 | GGTGCTCCACATTTTGAGGTAA | 58.846 | 45.455 | 0.00 | 0.00 | 35.86 | 2.85 |
4979 | 11767 | 3.191371 | GGTGCTCCACATTTTGAGGTAAG | 59.809 | 47.826 | 0.00 | 0.00 | 35.86 | 2.34 |
4980 | 11768 | 4.072131 | GTGCTCCACATTTTGAGGTAAGA | 58.928 | 43.478 | 0.00 | 0.00 | 34.08 | 2.10 |
4981 | 11769 | 4.702131 | GTGCTCCACATTTTGAGGTAAGAT | 59.298 | 41.667 | 0.00 | 0.00 | 34.08 | 2.40 |
4982 | 11770 | 4.701651 | TGCTCCACATTTTGAGGTAAGATG | 59.298 | 41.667 | 0.00 | 0.00 | 37.03 | 2.90 |
4983 | 11771 | 4.702131 | GCTCCACATTTTGAGGTAAGATGT | 59.298 | 41.667 | 0.00 | 0.00 | 42.83 | 3.06 |
4984 | 11772 | 5.163713 | GCTCCACATTTTGAGGTAAGATGTC | 60.164 | 44.000 | 0.00 | 0.00 | 40.85 | 3.06 |
4985 | 11773 | 5.253330 | TCCACATTTTGAGGTAAGATGTCC | 58.747 | 41.667 | 0.00 | 0.00 | 40.85 | 4.02 |
4986 | 11774 | 4.399303 | CCACATTTTGAGGTAAGATGTCCC | 59.601 | 45.833 | 0.00 | 0.00 | 40.85 | 4.46 |
4987 | 11775 | 5.009631 | CACATTTTGAGGTAAGATGTCCCA | 58.990 | 41.667 | 0.00 | 0.00 | 40.85 | 4.37 |
4988 | 11776 | 5.476599 | CACATTTTGAGGTAAGATGTCCCAA | 59.523 | 40.000 | 0.00 | 0.00 | 40.85 | 4.12 |
4989 | 11777 | 5.476945 | ACATTTTGAGGTAAGATGTCCCAAC | 59.523 | 40.000 | 0.00 | 0.00 | 39.19 | 3.77 |
4990 | 11778 | 4.993705 | TTTGAGGTAAGATGTCCCAACT | 57.006 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
4991 | 11779 | 3.981071 | TGAGGTAAGATGTCCCAACTG | 57.019 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
4992 | 11780 | 3.248024 | TGAGGTAAGATGTCCCAACTGT | 58.752 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
4993 | 11781 | 4.422057 | TGAGGTAAGATGTCCCAACTGTA | 58.578 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
4994 | 11782 | 4.841813 | TGAGGTAAGATGTCCCAACTGTAA | 59.158 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
4995 | 11783 | 5.046591 | TGAGGTAAGATGTCCCAACTGTAAG | 60.047 | 44.000 | 0.00 | 0.00 | 42.29 | 2.34 |
4996 | 11784 | 4.225267 | AGGTAAGATGTCCCAACTGTAAGG | 59.775 | 45.833 | 0.00 | 0.00 | 39.30 | 2.69 |
4997 | 11785 | 4.224370 | GGTAAGATGTCCCAACTGTAAGGA | 59.776 | 45.833 | 1.15 | 0.00 | 39.30 | 3.36 |
4998 | 11786 | 4.993705 | AAGATGTCCCAACTGTAAGGAA | 57.006 | 40.909 | 0.68 | 0.00 | 39.30 | 3.36 |
4999 | 11787 | 4.559862 | AGATGTCCCAACTGTAAGGAAG | 57.440 | 45.455 | 0.68 | 0.00 | 39.30 | 3.46 |
5000 | 11788 | 3.910627 | AGATGTCCCAACTGTAAGGAAGT | 59.089 | 43.478 | 0.68 | 0.00 | 39.30 | 3.01 |
5001 | 11789 | 3.485463 | TGTCCCAACTGTAAGGAAGTG | 57.515 | 47.619 | 0.68 | 0.00 | 39.30 | 3.16 |
5002 | 11790 | 2.775384 | TGTCCCAACTGTAAGGAAGTGT | 59.225 | 45.455 | 0.68 | 0.00 | 39.30 | 3.55 |
5003 | 11791 | 3.968649 | TGTCCCAACTGTAAGGAAGTGTA | 59.031 | 43.478 | 0.68 | 0.00 | 39.30 | 2.90 |
5004 | 11792 | 4.039973 | TGTCCCAACTGTAAGGAAGTGTAG | 59.960 | 45.833 | 0.68 | 0.00 | 39.30 | 2.74 |
5005 | 11793 | 4.282703 | GTCCCAACTGTAAGGAAGTGTAGA | 59.717 | 45.833 | 0.68 | 0.00 | 39.30 | 2.59 |
5006 | 11794 | 4.903049 | TCCCAACTGTAAGGAAGTGTAGAA | 59.097 | 41.667 | 1.15 | 0.00 | 39.30 | 2.10 |
5007 | 11795 | 4.995487 | CCCAACTGTAAGGAAGTGTAGAAC | 59.005 | 45.833 | 1.15 | 0.00 | 39.30 | 3.01 |
5008 | 11796 | 4.995487 | CCAACTGTAAGGAAGTGTAGAACC | 59.005 | 45.833 | 0.00 | 0.00 | 39.30 | 3.62 |
5009 | 11797 | 4.886496 | ACTGTAAGGAAGTGTAGAACCC | 57.114 | 45.455 | 0.00 | 0.00 | 39.30 | 4.11 |
5010 | 11798 | 4.490706 | ACTGTAAGGAAGTGTAGAACCCT | 58.509 | 43.478 | 0.00 | 0.00 | 39.30 | 4.34 |
5011 | 11799 | 4.906060 | ACTGTAAGGAAGTGTAGAACCCTT | 59.094 | 41.667 | 0.00 | 0.00 | 39.30 | 3.95 |
5012 | 11800 | 5.368816 | ACTGTAAGGAAGTGTAGAACCCTTT | 59.631 | 40.000 | 0.00 | 0.00 | 39.30 | 3.11 |
5013 | 11801 | 5.617252 | TGTAAGGAAGTGTAGAACCCTTTG | 58.383 | 41.667 | 0.00 | 0.00 | 38.16 | 2.77 |
5014 | 11802 | 3.790089 | AGGAAGTGTAGAACCCTTTGG | 57.210 | 47.619 | 0.00 | 0.00 | 37.80 | 3.28 |
5023 | 11811 | 2.852075 | ACCCTTTGGTCTCGGGCA | 60.852 | 61.111 | 0.00 | 0.00 | 43.06 | 5.36 |
5024 | 11812 | 2.045926 | CCCTTTGGTCTCGGGCAG | 60.046 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
5025 | 11813 | 2.747855 | CCTTTGGTCTCGGGCAGC | 60.748 | 66.667 | 0.00 | 0.00 | 0.00 | 5.25 |
5026 | 11814 | 2.032528 | CTTTGGTCTCGGGCAGCA | 59.967 | 61.111 | 0.00 | 0.00 | 0.00 | 4.41 |
5027 | 11815 | 2.281484 | TTTGGTCTCGGGCAGCAC | 60.281 | 61.111 | 0.00 | 0.00 | 0.00 | 4.40 |
5028 | 11816 | 3.113514 | TTTGGTCTCGGGCAGCACA | 62.114 | 57.895 | 0.00 | 0.00 | 0.00 | 4.57 |
5029 | 11817 | 2.410322 | TTTGGTCTCGGGCAGCACAT | 62.410 | 55.000 | 0.00 | 0.00 | 0.00 | 3.21 |
5030 | 11818 | 1.549243 | TTGGTCTCGGGCAGCACATA | 61.549 | 55.000 | 0.00 | 0.00 | 0.00 | 2.29 |
5031 | 11819 | 1.337384 | TGGTCTCGGGCAGCACATAT | 61.337 | 55.000 | 0.00 | 0.00 | 0.00 | 1.78 |
5032 | 11820 | 0.679505 | GGTCTCGGGCAGCACATATA | 59.320 | 55.000 | 0.00 | 0.00 | 0.00 | 0.86 |
5033 | 11821 | 1.276421 | GGTCTCGGGCAGCACATATAT | 59.724 | 52.381 | 0.00 | 0.00 | 0.00 | 0.86 |
5034 | 11822 | 2.496070 | GGTCTCGGGCAGCACATATATA | 59.504 | 50.000 | 0.00 | 0.00 | 0.00 | 0.86 |
5035 | 11823 | 3.133003 | GGTCTCGGGCAGCACATATATAT | 59.867 | 47.826 | 0.00 | 0.00 | 0.00 | 0.86 |
5036 | 11824 | 4.383118 | GGTCTCGGGCAGCACATATATATT | 60.383 | 45.833 | 0.00 | 0.00 | 0.00 | 1.28 |
5037 | 11825 | 4.568359 | GTCTCGGGCAGCACATATATATTG | 59.432 | 45.833 | 0.00 | 0.00 | 0.00 | 1.90 |
5038 | 11826 | 4.466015 | TCTCGGGCAGCACATATATATTGA | 59.534 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
5039 | 11827 | 5.046663 | TCTCGGGCAGCACATATATATTGAA | 60.047 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
5040 | 11828 | 5.744171 | TCGGGCAGCACATATATATTGAAT | 58.256 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
5041 | 11829 | 5.817296 | TCGGGCAGCACATATATATTGAATC | 59.183 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
5042 | 11830 | 5.585844 | CGGGCAGCACATATATATTGAATCA | 59.414 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
5043 | 11831 | 6.261603 | CGGGCAGCACATATATATTGAATCAT | 59.738 | 38.462 | 0.00 | 0.00 | 0.00 | 2.45 |
5044 | 11832 | 7.201758 | CGGGCAGCACATATATATTGAATCATT | 60.202 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
5045 | 11833 | 7.919091 | GGGCAGCACATATATATTGAATCATTG | 59.081 | 37.037 | 0.00 | 0.00 | 0.00 | 2.82 |
5046 | 11834 | 7.434307 | GGCAGCACATATATATTGAATCATTGC | 59.566 | 37.037 | 0.00 | 0.00 | 0.00 | 3.56 |
5047 | 11835 | 7.434307 | GCAGCACATATATATTGAATCATTGCC | 59.566 | 37.037 | 0.00 | 0.00 | 0.00 | 4.52 |
5048 | 11836 | 7.642586 | CAGCACATATATATTGAATCATTGCCG | 59.357 | 37.037 | 0.00 | 0.00 | 0.00 | 5.69 |
5049 | 11837 | 7.337689 | AGCACATATATATTGAATCATTGCCGT | 59.662 | 33.333 | 0.00 | 0.00 | 0.00 | 5.68 |
5050 | 11838 | 7.430211 | GCACATATATATTGAATCATTGCCGTG | 59.570 | 37.037 | 0.00 | 0.00 | 0.00 | 4.94 |
5051 | 11839 | 7.911727 | CACATATATATTGAATCATTGCCGTGG | 59.088 | 37.037 | 0.00 | 0.00 | 0.00 | 4.94 |
5052 | 11840 | 3.648339 | ATATTGAATCATTGCCGTGGC | 57.352 | 42.857 | 3.30 | 3.30 | 42.35 | 5.01 |
5053 | 11841 | 1.477553 | ATTGAATCATTGCCGTGGCT | 58.522 | 45.000 | 12.84 | 0.00 | 42.51 | 4.75 |
5054 | 11842 | 1.255882 | TTGAATCATTGCCGTGGCTT | 58.744 | 45.000 | 12.84 | 0.00 | 42.51 | 4.35 |
5055 | 11843 | 2.121291 | TGAATCATTGCCGTGGCTTA | 57.879 | 45.000 | 12.84 | 0.44 | 42.51 | 3.09 |
5056 | 11844 | 1.742831 | TGAATCATTGCCGTGGCTTAC | 59.257 | 47.619 | 12.84 | 0.00 | 42.51 | 2.34 |
5057 | 11845 | 1.742831 | GAATCATTGCCGTGGCTTACA | 59.257 | 47.619 | 12.84 | 0.00 | 42.51 | 2.41 |
5058 | 11846 | 1.832883 | ATCATTGCCGTGGCTTACAA | 58.167 | 45.000 | 12.84 | 0.00 | 42.51 | 2.41 |
5059 | 11847 | 1.164411 | TCATTGCCGTGGCTTACAAG | 58.836 | 50.000 | 12.84 | 0.00 | 42.51 | 3.16 |
5060 | 11848 | 1.164411 | CATTGCCGTGGCTTACAAGA | 58.836 | 50.000 | 12.84 | 0.00 | 42.51 | 3.02 |
5061 | 11849 | 1.745087 | CATTGCCGTGGCTTACAAGAT | 59.255 | 47.619 | 12.84 | 0.00 | 42.51 | 2.40 |
5062 | 11850 | 1.904287 | TTGCCGTGGCTTACAAGATT | 58.096 | 45.000 | 12.84 | 0.00 | 42.51 | 2.40 |
5063 | 11851 | 1.164411 | TGCCGTGGCTTACAAGATTG | 58.836 | 50.000 | 12.84 | 0.00 | 42.51 | 2.67 |
5064 | 11852 | 0.451783 | GCCGTGGCTTACAAGATTGG | 59.548 | 55.000 | 2.98 | 0.00 | 38.26 | 3.16 |
5065 | 11853 | 1.094785 | CCGTGGCTTACAAGATTGGG | 58.905 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
5066 | 11854 | 1.339631 | CCGTGGCTTACAAGATTGGGA | 60.340 | 52.381 | 0.00 | 0.00 | 0.00 | 4.37 |
5067 | 11855 | 2.009774 | CGTGGCTTACAAGATTGGGAG | 58.990 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
5068 | 11856 | 2.369394 | GTGGCTTACAAGATTGGGAGG | 58.631 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
5069 | 11857 | 1.992557 | TGGCTTACAAGATTGGGAGGT | 59.007 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
5070 | 11858 | 2.378547 | TGGCTTACAAGATTGGGAGGTT | 59.621 | 45.455 | 0.00 | 0.00 | 0.00 | 3.50 |
5071 | 11859 | 2.755103 | GGCTTACAAGATTGGGAGGTTG | 59.245 | 50.000 | 0.00 | 0.00 | 0.00 | 3.77 |
5072 | 11860 | 3.421844 | GCTTACAAGATTGGGAGGTTGT | 58.578 | 45.455 | 0.00 | 0.00 | 37.00 | 3.32 |
5073 | 11861 | 3.826729 | GCTTACAAGATTGGGAGGTTGTT | 59.173 | 43.478 | 0.00 | 0.00 | 34.92 | 2.83 |
5074 | 11862 | 4.321230 | GCTTACAAGATTGGGAGGTTGTTG | 60.321 | 45.833 | 0.00 | 0.00 | 34.92 | 3.33 |
5075 | 11863 | 2.597455 | ACAAGATTGGGAGGTTGTTGG | 58.403 | 47.619 | 0.00 | 0.00 | 28.62 | 3.77 |
5076 | 11864 | 1.895131 | CAAGATTGGGAGGTTGTTGGG | 59.105 | 52.381 | 0.00 | 0.00 | 0.00 | 4.12 |
5077 | 11865 | 1.455822 | AGATTGGGAGGTTGTTGGGA | 58.544 | 50.000 | 0.00 | 0.00 | 0.00 | 4.37 |
5078 | 11866 | 1.075536 | AGATTGGGAGGTTGTTGGGAC | 59.924 | 52.381 | 0.00 | 0.00 | 0.00 | 4.46 |
5079 | 11867 | 1.075536 | GATTGGGAGGTTGTTGGGACT | 59.924 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
5080 | 11868 | 0.476771 | TTGGGAGGTTGTTGGGACTC | 59.523 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
5081 | 11869 | 0.401395 | TGGGAGGTTGTTGGGACTCT | 60.401 | 55.000 | 0.00 | 0.00 | 0.00 | 3.24 |
5082 | 11870 | 0.771755 | GGGAGGTTGTTGGGACTCTT | 59.228 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
5083 | 11871 | 1.545651 | GGGAGGTTGTTGGGACTCTTG | 60.546 | 57.143 | 0.00 | 0.00 | 0.00 | 3.02 |
5084 | 11872 | 1.420138 | GGAGGTTGTTGGGACTCTTGA | 59.580 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
5085 | 11873 | 2.551071 | GGAGGTTGTTGGGACTCTTGAG | 60.551 | 54.545 | 0.00 | 0.00 | 0.00 | 3.02 |
5086 | 11874 | 2.368875 | GAGGTTGTTGGGACTCTTGAGA | 59.631 | 50.000 | 4.49 | 0.00 | 0.00 | 3.27 |
5099 | 11887 | 4.750952 | CTCTTGAGAGTTGTACACGAGA | 57.249 | 45.455 | 0.00 | 0.00 | 37.40 | 4.04 |
5100 | 11888 | 4.717991 | CTCTTGAGAGTTGTACACGAGAG | 58.282 | 47.826 | 11.34 | 11.34 | 37.40 | 3.20 |
5101 | 11889 | 3.502595 | TCTTGAGAGTTGTACACGAGAGG | 59.497 | 47.826 | 0.00 | 0.00 | 0.00 | 3.69 |
5102 | 11890 | 2.160205 | TGAGAGTTGTACACGAGAGGG | 58.840 | 52.381 | 0.00 | 0.00 | 43.28 | 4.30 |
5103 | 11891 | 2.224695 | TGAGAGTTGTACACGAGAGGGA | 60.225 | 50.000 | 0.00 | 0.00 | 38.45 | 4.20 |
5104 | 11892 | 2.420722 | GAGAGTTGTACACGAGAGGGAG | 59.579 | 54.545 | 0.00 | 0.00 | 38.45 | 4.30 |
5105 | 11893 | 2.040012 | AGAGTTGTACACGAGAGGGAGA | 59.960 | 50.000 | 0.00 | 0.00 | 38.45 | 3.71 |
5106 | 11894 | 2.818432 | GAGTTGTACACGAGAGGGAGAA | 59.182 | 50.000 | 0.00 | 0.00 | 38.45 | 2.87 |
5107 | 11895 | 3.228453 | AGTTGTACACGAGAGGGAGAAA | 58.772 | 45.455 | 0.00 | 0.00 | 38.45 | 2.52 |
5108 | 11896 | 3.256136 | AGTTGTACACGAGAGGGAGAAAG | 59.744 | 47.826 | 0.00 | 0.00 | 38.45 | 2.62 |
5109 | 11897 | 3.150458 | TGTACACGAGAGGGAGAAAGA | 57.850 | 47.619 | 0.00 | 0.00 | 38.45 | 2.52 |
5110 | 11898 | 3.082548 | TGTACACGAGAGGGAGAAAGAG | 58.917 | 50.000 | 0.00 | 0.00 | 38.45 | 2.85 |
5111 | 11899 | 2.588464 | ACACGAGAGGGAGAAAGAGA | 57.412 | 50.000 | 0.00 | 0.00 | 38.45 | 3.10 |
5112 | 11900 | 2.442413 | ACACGAGAGGGAGAAAGAGAG | 58.558 | 52.381 | 0.00 | 0.00 | 38.45 | 3.20 |
5113 | 11901 | 2.040545 | ACACGAGAGGGAGAAAGAGAGA | 59.959 | 50.000 | 0.00 | 0.00 | 38.45 | 3.10 |
5114 | 11902 | 3.287222 | CACGAGAGGGAGAAAGAGAGAT | 58.713 | 50.000 | 0.00 | 0.00 | 35.60 | 2.75 |
5115 | 11903 | 3.699038 | CACGAGAGGGAGAAAGAGAGATT | 59.301 | 47.826 | 0.00 | 0.00 | 35.60 | 2.40 |
5116 | 11904 | 4.884744 | CACGAGAGGGAGAAAGAGAGATTA | 59.115 | 45.833 | 0.00 | 0.00 | 35.60 | 1.75 |
5117 | 11905 | 4.885325 | ACGAGAGGGAGAAAGAGAGATTAC | 59.115 | 45.833 | 0.00 | 0.00 | 0.00 | 1.89 |
5118 | 11906 | 4.884744 | CGAGAGGGAGAAAGAGAGATTACA | 59.115 | 45.833 | 0.00 | 0.00 | 0.00 | 2.41 |
5119 | 11907 | 5.534654 | CGAGAGGGAGAAAGAGAGATTACAT | 59.465 | 44.000 | 0.00 | 0.00 | 0.00 | 2.29 |
5120 | 11908 | 6.040391 | CGAGAGGGAGAAAGAGAGATTACATT | 59.960 | 42.308 | 0.00 | 0.00 | 0.00 | 2.71 |
5121 | 11909 | 7.123355 | AGAGGGAGAAAGAGAGATTACATTG | 57.877 | 40.000 | 0.00 | 0.00 | 0.00 | 2.82 |
5122 | 11910 | 6.900186 | AGAGGGAGAAAGAGAGATTACATTGA | 59.100 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
5133 | 11921 | 7.181845 | AGAGAGATTACATTGAGGGAGAAGTTT | 59.818 | 37.037 | 0.00 | 0.00 | 0.00 | 2.66 |
5190 | 11993 | 9.715123 | CAGACAAGCATATCTCTATCTAATACG | 57.285 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
5228 | 12031 | 5.745227 | TCAATCTGAACCCTATGGAACTTC | 58.255 | 41.667 | 0.00 | 0.00 | 34.81 | 3.01 |
5229 | 12032 | 5.488919 | TCAATCTGAACCCTATGGAACTTCT | 59.511 | 40.000 | 0.00 | 0.00 | 34.81 | 2.85 |
5262 | 12066 | 6.773638 | AGATTGTACTTGAAGTCATCCAACT | 58.226 | 36.000 | 0.00 | 0.28 | 0.00 | 3.16 |
5269 | 12073 | 5.529060 | ACTTGAAGTCATCCAACTTTCTCAC | 59.471 | 40.000 | 0.00 | 0.00 | 39.55 | 3.51 |
5291 | 12095 | 3.399330 | TCTAAGAGGTTTTGTGAAGCCG | 58.601 | 45.455 | 0.00 | 0.00 | 40.72 | 5.52 |
5294 | 12098 | 0.234884 | GAGGTTTTGTGAAGCCGTCG | 59.765 | 55.000 | 0.00 | 0.00 | 40.72 | 5.12 |
5310 | 12114 | 1.134367 | CGTCGGCTAGTTGATCTCCAA | 59.866 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
5359 | 12163 | 5.700722 | TTACGAGCTACTCTTTCTGTGAA | 57.299 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
5362 | 12166 | 5.542779 | ACGAGCTACTCTTTCTGTGAAAAT | 58.457 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
5385 | 12189 | 9.643693 | AAATGTGAAAATCAACCTCAATATGTC | 57.356 | 29.630 | 0.00 | 0.00 | 0.00 | 3.06 |
5408 | 12212 | 1.106351 | TGCGTGCATGGAAAACAGGT | 61.106 | 50.000 | 8.27 | 0.00 | 32.37 | 4.00 |
5424 | 12228 | 6.859112 | AAACAGGTTTAGCTGAGAGATAGA | 57.141 | 37.500 | 15.22 | 0.00 | 0.00 | 1.98 |
5540 | 12345 | 7.129109 | TGTAGCATTTGTTAGAGCTTTGTAC | 57.871 | 36.000 | 0.00 | 0.00 | 38.47 | 2.90 |
5541 | 12346 | 6.934645 | TGTAGCATTTGTTAGAGCTTTGTACT | 59.065 | 34.615 | 0.00 | 0.00 | 38.47 | 2.73 |
5542 | 12347 | 6.487689 | AGCATTTGTTAGAGCTTTGTACTC | 57.512 | 37.500 | 0.00 | 0.00 | 32.52 | 2.59 |
5543 | 12348 | 5.997746 | AGCATTTGTTAGAGCTTTGTACTCA | 59.002 | 36.000 | 0.00 | 0.00 | 36.58 | 3.41 |
5544 | 12349 | 6.148480 | AGCATTTGTTAGAGCTTTGTACTCAG | 59.852 | 38.462 | 0.00 | 0.00 | 36.58 | 3.35 |
5545 | 12350 | 5.924475 | TTTGTTAGAGCTTTGTACTCAGC | 57.076 | 39.130 | 8.39 | 8.39 | 36.58 | 4.26 |
5617 | 12422 | 2.808919 | TGACACAAGGTTTGTTCCCAA | 58.191 | 42.857 | 0.00 | 0.00 | 43.23 | 4.12 |
5637 | 12442 | 6.071051 | TCCCAAAAATATAGCAAAACCACCTC | 60.071 | 38.462 | 0.00 | 0.00 | 0.00 | 3.85 |
5710 | 12529 | 0.107508 | ACAAGCATGGATGAGGACCG | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
5778 | 12925 | 7.491048 | TCAAAATTCTTTTAACTGCAGTCCAAC | 59.509 | 33.333 | 21.95 | 0.00 | 0.00 | 3.77 |
5845 | 12992 | 6.939163 | ACAGAATAGGAAATATCAGGATGTGC | 59.061 | 38.462 | 0.00 | 0.00 | 37.40 | 4.57 |
5846 | 12993 | 7.166851 | CAGAATAGGAAATATCAGGATGTGCT | 58.833 | 38.462 | 0.00 | 0.00 | 37.40 | 4.40 |
5847 | 12994 | 7.333921 | CAGAATAGGAAATATCAGGATGTGCTC | 59.666 | 40.741 | 0.00 | 0.00 | 37.40 | 4.26 |
5848 | 12995 | 4.363991 | AGGAAATATCAGGATGTGCTCC | 57.636 | 45.455 | 0.00 | 0.00 | 45.33 | 4.70 |
5864 | 13011 | 3.375782 | GCTCCATGCAAATATTGACCC | 57.624 | 47.619 | 0.00 | 0.00 | 42.31 | 4.46 |
5865 | 13012 | 2.694628 | GCTCCATGCAAATATTGACCCA | 59.305 | 45.455 | 0.00 | 0.00 | 42.31 | 4.51 |
5866 | 13013 | 3.322828 | GCTCCATGCAAATATTGACCCAT | 59.677 | 43.478 | 0.00 | 0.00 | 42.31 | 4.00 |
5867 | 13014 | 4.798263 | GCTCCATGCAAATATTGACCCATG | 60.798 | 45.833 | 0.00 | 0.54 | 42.31 | 3.66 |
5868 | 13015 | 4.544683 | TCCATGCAAATATTGACCCATGA | 58.455 | 39.130 | 14.45 | 4.29 | 33.34 | 3.07 |
5869 | 13016 | 5.149239 | TCCATGCAAATATTGACCCATGAT | 58.851 | 37.500 | 14.45 | 0.00 | 33.34 | 2.45 |
5870 | 13017 | 5.011227 | TCCATGCAAATATTGACCCATGATG | 59.989 | 40.000 | 14.45 | 0.00 | 33.34 | 3.07 |
5871 | 13018 | 5.221561 | CCATGCAAATATTGACCCATGATGT | 60.222 | 40.000 | 14.45 | 0.00 | 33.34 | 3.06 |
5872 | 13019 | 5.265350 | TGCAAATATTGACCCATGATGTG | 57.735 | 39.130 | 0.00 | 0.00 | 0.00 | 3.21 |
5873 | 13020 | 4.053295 | GCAAATATTGACCCATGATGTGC | 58.947 | 43.478 | 0.00 | 0.00 | 0.00 | 4.57 |
5874 | 13021 | 4.202182 | GCAAATATTGACCCATGATGTGCT | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 4.40 |
5875 | 13022 | 5.526115 | CAAATATTGACCCATGATGTGCTC | 58.474 | 41.667 | 0.00 | 0.00 | 0.00 | 4.26 |
5876 | 13023 | 2.062971 | ATTGACCCATGATGTGCTCC | 57.937 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
5877 | 13024 | 0.994247 | TTGACCCATGATGTGCTCCT | 59.006 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
5878 | 13025 | 1.878211 | TGACCCATGATGTGCTCCTA | 58.122 | 50.000 | 0.00 | 0.00 | 0.00 | 2.94 |
5879 | 13026 | 1.486310 | TGACCCATGATGTGCTCCTAC | 59.514 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
5880 | 13027 | 1.765314 | GACCCATGATGTGCTCCTACT | 59.235 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
5881 | 13028 | 1.765314 | ACCCATGATGTGCTCCTACTC | 59.235 | 52.381 | 0.00 | 0.00 | 0.00 | 2.59 |
5882 | 13029 | 1.071385 | CCCATGATGTGCTCCTACTCC | 59.929 | 57.143 | 0.00 | 0.00 | 0.00 | 3.85 |
5883 | 13030 | 2.045524 | CCATGATGTGCTCCTACTCCT | 58.954 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
5884 | 13031 | 3.234353 | CCATGATGTGCTCCTACTCCTA | 58.766 | 50.000 | 0.00 | 0.00 | 0.00 | 2.94 |
5885 | 13032 | 3.006323 | CCATGATGTGCTCCTACTCCTAC | 59.994 | 52.174 | 0.00 | 0.00 | 0.00 | 3.18 |
5886 | 13033 | 3.671740 | TGATGTGCTCCTACTCCTACT | 57.328 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
5887 | 13034 | 3.291584 | TGATGTGCTCCTACTCCTACTG | 58.708 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
5888 | 13035 | 1.475403 | TGTGCTCCTACTCCTACTGC | 58.525 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
5889 | 13036 | 1.272480 | TGTGCTCCTACTCCTACTGCA | 60.272 | 52.381 | 0.00 | 0.00 | 0.00 | 4.41 |
5890 | 13037 | 2.035632 | GTGCTCCTACTCCTACTGCAT | 58.964 | 52.381 | 0.00 | 0.00 | 0.00 | 3.96 |
5891 | 13038 | 2.034878 | TGCTCCTACTCCTACTGCATG | 58.965 | 52.381 | 0.00 | 0.00 | 0.00 | 4.06 |
5892 | 13039 | 2.311463 | GCTCCTACTCCTACTGCATGA | 58.689 | 52.381 | 0.00 | 0.00 | 0.00 | 3.07 |
5893 | 13040 | 2.035321 | GCTCCTACTCCTACTGCATGAC | 59.965 | 54.545 | 0.00 | 0.00 | 0.00 | 3.06 |
5894 | 13041 | 3.561143 | CTCCTACTCCTACTGCATGACT | 58.439 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5895 | 13042 | 3.291584 | TCCTACTCCTACTGCATGACTG | 58.708 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
280 | 291 | 7.434013 | TCAAGTTAAATTGAAAAACCGAAGAGC | 59.566 | 33.333 | 15.48 | 0.00 | 36.28 | 4.09 |
373 | 384 | 1.659098 | GGATTTCAAGTGGCGTACTCG | 59.341 | 52.381 | 0.00 | 0.00 | 39.18 | 4.18 |
495 | 697 | 7.126573 | ACCCAAGAAATGTTCCTTTTCCTTAAA | 59.873 | 33.333 | 0.00 | 0.00 | 34.34 | 1.52 |
519 | 721 | 6.347888 | GCTCTTGAGTCACGATCTATAGTACC | 60.348 | 46.154 | 0.00 | 0.00 | 0.00 | 3.34 |
585 | 802 | 3.244078 | ACATCAGGACTTGAGCACGTTAA | 60.244 | 43.478 | 0.00 | 0.00 | 39.68 | 2.01 |
586 | 803 | 2.299013 | ACATCAGGACTTGAGCACGTTA | 59.701 | 45.455 | 0.00 | 0.00 | 39.68 | 3.18 |
588 | 805 | 0.681733 | ACATCAGGACTTGAGCACGT | 59.318 | 50.000 | 0.00 | 0.00 | 39.68 | 4.49 |
589 | 806 | 2.654749 | TACATCAGGACTTGAGCACG | 57.345 | 50.000 | 0.00 | 0.00 | 39.68 | 5.34 |
590 | 807 | 5.269505 | AGTATACATCAGGACTTGAGCAC | 57.730 | 43.478 | 5.50 | 0.00 | 39.68 | 4.40 |
591 | 808 | 5.658634 | AGAAGTATACATCAGGACTTGAGCA | 59.341 | 40.000 | 10.51 | 0.00 | 39.68 | 4.26 |
592 | 809 | 6.155475 | AGAAGTATACATCAGGACTTGAGC | 57.845 | 41.667 | 10.51 | 0.00 | 39.68 | 4.26 |
593 | 810 | 9.442047 | AAAAAGAAGTATACATCAGGACTTGAG | 57.558 | 33.333 | 10.51 | 0.00 | 39.68 | 3.02 |
594 | 811 | 9.219603 | CAAAAAGAAGTATACATCAGGACTTGA | 57.780 | 33.333 | 10.51 | 0.00 | 40.85 | 3.02 |
595 | 812 | 9.003658 | ACAAAAAGAAGTATACATCAGGACTTG | 57.996 | 33.333 | 10.51 | 8.24 | 32.37 | 3.16 |
596 | 813 | 9.574516 | AACAAAAAGAAGTATACATCAGGACTT | 57.425 | 29.630 | 10.51 | 0.00 | 34.88 | 3.01 |
597 | 814 | 9.574516 | AAACAAAAAGAAGTATACATCAGGACT | 57.425 | 29.630 | 10.51 | 0.00 | 0.00 | 3.85 |
645 | 862 | 8.950210 | CATGTTCTTGAGTACATTAAGTCCATT | 58.050 | 33.333 | 0.00 | 0.00 | 34.49 | 3.16 |
646 | 863 | 8.103305 | ACATGTTCTTGAGTACATTAAGTCCAT | 58.897 | 33.333 | 0.00 | 1.63 | 34.49 | 3.41 |
647 | 864 | 7.450074 | ACATGTTCTTGAGTACATTAAGTCCA | 58.550 | 34.615 | 0.00 | 0.00 | 34.49 | 4.02 |
648 | 865 | 7.907214 | ACATGTTCTTGAGTACATTAAGTCC | 57.093 | 36.000 | 0.00 | 0.00 | 34.49 | 3.85 |
659 | 876 | 9.982651 | ACGCTATAATATAACATGTTCTTGAGT | 57.017 | 29.630 | 15.85 | 0.98 | 0.00 | 3.41 |
661 | 878 | 9.974980 | TCACGCTATAATATAACATGTTCTTGA | 57.025 | 29.630 | 15.85 | 3.97 | 0.00 | 3.02 |
663 | 880 | 8.926710 | GCTCACGCTATAATATAACATGTTCTT | 58.073 | 33.333 | 15.85 | 9.91 | 0.00 | 2.52 |
664 | 881 | 8.307483 | AGCTCACGCTATAATATAACATGTTCT | 58.693 | 33.333 | 15.85 | 8.14 | 46.79 | 3.01 |
665 | 882 | 8.467402 | AGCTCACGCTATAATATAACATGTTC | 57.533 | 34.615 | 15.85 | 0.00 | 46.79 | 3.18 |
700 | 917 | 2.554893 | GGGGAATGCACGTTAAGTCAAA | 59.445 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
739 | 956 | 5.460748 | CAGTTAAACATCGCACATACGGATA | 59.539 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
836 | 1340 | 2.038689 | TCATTGTACAACCCTTACGGCA | 59.961 | 45.455 | 11.22 | 0.00 | 33.26 | 5.69 |
989 | 1710 | 2.812591 | AGCTTGTGCATCTTGAGTTCTG | 59.187 | 45.455 | 0.00 | 0.00 | 42.74 | 3.02 |
1020 | 1741 | 4.744795 | TGAGATGAAGACTAGGAAAGCC | 57.255 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
1036 | 1763 | 1.439228 | CCAGCGTCGACCATGAGAT | 59.561 | 57.895 | 10.58 | 0.00 | 0.00 | 2.75 |
1179 | 1908 | 3.125376 | GCTGGTGCCATAGGGAGGG | 62.125 | 68.421 | 0.00 | 0.00 | 35.59 | 4.30 |
1596 | 4041 | 5.175856 | GCTAGCTACAAGATAACAACGATGG | 59.824 | 44.000 | 7.70 | 0.00 | 0.00 | 3.51 |
1629 | 4087 | 3.838244 | TCAGCCGCTTACTTGGATAAT | 57.162 | 42.857 | 0.00 | 0.00 | 0.00 | 1.28 |
1630 | 4088 | 3.133901 | TCATCAGCCGCTTACTTGGATAA | 59.866 | 43.478 | 0.00 | 0.00 | 0.00 | 1.75 |
1631 | 4089 | 2.698274 | TCATCAGCCGCTTACTTGGATA | 59.302 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
1632 | 4090 | 1.486310 | TCATCAGCCGCTTACTTGGAT | 59.514 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
1710 | 4175 | 2.915659 | ACTCCGAACTCGCCCACA | 60.916 | 61.111 | 0.00 | 0.00 | 38.18 | 4.17 |
1979 | 4502 | 3.461773 | CTGGTCAGGATCGGCGGT | 61.462 | 66.667 | 7.21 | 0.00 | 0.00 | 5.68 |
2003 | 4526 | 2.171209 | CTGATGGTGGTGAGGCGTCA | 62.171 | 60.000 | 4.68 | 4.68 | 0.00 | 4.35 |
2200 | 8879 | 1.403679 | CTTTTGGTTGAGTTGGCGACA | 59.596 | 47.619 | 7.78 | 0.00 | 39.83 | 4.35 |
2262 | 8947 | 1.333619 | CAACTGTCAACCACCTTTCCG | 59.666 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
2324 | 9014 | 4.704833 | CCCCTCCACAGCACACCG | 62.705 | 72.222 | 0.00 | 0.00 | 0.00 | 4.94 |
2544 | 9236 | 6.833933 | AGTAGAAATGAGTTTTTCACCTGGTT | 59.166 | 34.615 | 0.00 | 0.00 | 38.99 | 3.67 |
2548 | 9240 | 6.263168 | CCACAGTAGAAATGAGTTTTTCACCT | 59.737 | 38.462 | 0.00 | 0.00 | 38.99 | 4.00 |
2958 | 9671 | 2.160219 | CAGTTTCATGTGTGGATGTCGG | 59.840 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2960 | 9673 | 3.411446 | TCCAGTTTCATGTGTGGATGTC | 58.589 | 45.455 | 0.00 | 0.00 | 34.03 | 3.06 |
3067 | 9780 | 1.909302 | CAGAAGGAGGCCTTGGTTAGA | 59.091 | 52.381 | 6.77 | 0.00 | 44.82 | 2.10 |
3238 | 9967 | 4.820775 | AGGGAGCTATCCTAGACAATTGA | 58.179 | 43.478 | 13.59 | 0.00 | 45.85 | 2.57 |
3284 | 10013 | 2.098117 | ACTGAACAGTTGCAAGTCTTGC | 59.902 | 45.455 | 27.38 | 27.38 | 44.00 | 4.01 |
3325 | 10054 | 0.721154 | CAGCTGCATGCAAGCAATTG | 59.279 | 50.000 | 30.47 | 21.27 | 45.13 | 2.32 |
3345 | 10074 | 5.288472 | CCGTTCAAAGCAAATTTATGTAGCC | 59.712 | 40.000 | 0.00 | 0.00 | 0.00 | 3.93 |
3366 | 10095 | 3.275617 | TGCTCATTTAATGCTACCCGT | 57.724 | 42.857 | 0.00 | 0.00 | 0.00 | 5.28 |
3560 | 10289 | 2.669569 | CCACCGGTTGCACCTCAG | 60.670 | 66.667 | 2.97 | 0.00 | 35.66 | 3.35 |
3598 | 10327 | 7.590322 | GCTGCATTCACTTCATTATATTGACAG | 59.410 | 37.037 | 0.00 | 1.50 | 0.00 | 3.51 |
3661 | 10391 | 2.420058 | AGGTTTAGGGGAAAGATGCG | 57.580 | 50.000 | 0.00 | 0.00 | 0.00 | 4.73 |
3680 | 10410 | 6.768861 | TGAAATAGAGACTTTTGAAACCGGAA | 59.231 | 34.615 | 9.46 | 0.00 | 0.00 | 4.30 |
3681 | 10411 | 6.204108 | GTGAAATAGAGACTTTTGAAACCGGA | 59.796 | 38.462 | 9.46 | 0.00 | 0.00 | 5.14 |
3682 | 10412 | 6.204882 | AGTGAAATAGAGACTTTTGAAACCGG | 59.795 | 38.462 | 0.00 | 0.00 | 0.00 | 5.28 |
3683 | 10413 | 7.190920 | AGTGAAATAGAGACTTTTGAAACCG | 57.809 | 36.000 | 0.00 | 0.00 | 0.00 | 4.44 |
3684 | 10414 | 9.274206 | ACTAGTGAAATAGAGACTTTTGAAACC | 57.726 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
3712 | 10442 | 1.407618 | GTGGACGAAAGCCCTGTTTTT | 59.592 | 47.619 | 0.00 | 0.00 | 33.21 | 1.94 |
3726 | 10456 | 1.001520 | TGTGTACATTGGGAGTGGACG | 59.998 | 52.381 | 0.00 | 0.00 | 32.96 | 4.79 |
3730 | 10460 | 4.876107 | GGACTAATGTGTACATTGGGAGTG | 59.124 | 45.833 | 20.38 | 7.91 | 45.46 | 3.51 |
3731 | 10461 | 4.080526 | GGGACTAATGTGTACATTGGGAGT | 60.081 | 45.833 | 20.38 | 15.24 | 45.46 | 3.85 |
3733 | 10463 | 3.118555 | CGGGACTAATGTGTACATTGGGA | 60.119 | 47.826 | 20.38 | 3.18 | 45.46 | 4.37 |
3734 | 10464 | 3.202906 | CGGGACTAATGTGTACATTGGG | 58.797 | 50.000 | 20.38 | 14.58 | 45.46 | 4.12 |
3735 | 10465 | 3.202906 | CCGGGACTAATGTGTACATTGG | 58.797 | 50.000 | 17.94 | 17.17 | 45.34 | 3.16 |
3740 | 10470 | 2.004733 | GCAACCGGGACTAATGTGTAC | 58.995 | 52.381 | 6.32 | 0.00 | 0.00 | 2.90 |
3742 | 10472 | 0.398696 | TGCAACCGGGACTAATGTGT | 59.601 | 50.000 | 6.32 | 0.00 | 0.00 | 3.72 |
3762 | 10492 | 2.824936 | TCACATTAGTCCCGGTTCGTAA | 59.175 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
3763 | 10493 | 2.424601 | CTCACATTAGTCCCGGTTCGTA | 59.575 | 50.000 | 0.00 | 0.00 | 0.00 | 3.43 |
3765 | 10495 | 1.922570 | CTCACATTAGTCCCGGTTCG | 58.077 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
3766 | 10496 | 1.066430 | TGCTCACATTAGTCCCGGTTC | 60.066 | 52.381 | 0.00 | 0.00 | 0.00 | 3.62 |
3767 | 10497 | 0.981183 | TGCTCACATTAGTCCCGGTT | 59.019 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
3768 | 10498 | 1.204146 | ATGCTCACATTAGTCCCGGT | 58.796 | 50.000 | 0.00 | 0.00 | 30.07 | 5.28 |
3769 | 10499 | 2.332063 | AATGCTCACATTAGTCCCGG | 57.668 | 50.000 | 0.00 | 0.00 | 44.78 | 5.73 |
3782 | 10512 | 2.194271 | CTCGAACCGGAACTAATGCTC | 58.806 | 52.381 | 9.46 | 0.00 | 0.00 | 4.26 |
3794 | 10524 | 4.570663 | CCCTAGCCGCTCGAACCG | 62.571 | 72.222 | 0.00 | 0.00 | 0.00 | 4.44 |
3810 | 10540 | 3.202706 | CTAAGGCCTTTCCGCGCC | 61.203 | 66.667 | 26.08 | 0.00 | 46.09 | 6.53 |
3811 | 10541 | 2.436115 | ACTAAGGCCTTTCCGCGC | 60.436 | 61.111 | 26.08 | 0.00 | 40.77 | 6.86 |
3812 | 10542 | 1.814169 | GGACTAAGGCCTTTCCGCG | 60.814 | 63.158 | 26.08 | 9.84 | 40.77 | 6.46 |
3813 | 10543 | 1.451567 | GGGACTAAGGCCTTTCCGC | 60.452 | 63.158 | 26.08 | 16.65 | 40.77 | 5.54 |
3814 | 10544 | 1.153429 | CGGGACTAAGGCCTTTCCG | 60.153 | 63.158 | 26.08 | 24.94 | 40.77 | 4.30 |
3815 | 10545 | 1.223763 | CCGGGACTAAGGCCTTTCC | 59.776 | 63.158 | 26.08 | 24.41 | 0.00 | 3.13 |
3816 | 10546 | 0.327259 | AACCGGGACTAAGGCCTTTC | 59.673 | 55.000 | 26.08 | 16.23 | 0.00 | 2.62 |
3817 | 10547 | 0.327259 | GAACCGGGACTAAGGCCTTT | 59.673 | 55.000 | 26.08 | 6.29 | 0.00 | 3.11 |
3823 | 10553 | 3.933332 | GTCTCATTTGAACCGGGACTAAG | 59.067 | 47.826 | 6.32 | 0.00 | 0.00 | 2.18 |
3842 | 10572 | 0.613777 | CAAGCCGGGACTAAAGGTCT | 59.386 | 55.000 | 2.18 | 0.00 | 43.97 | 3.85 |
3843 | 10573 | 0.611714 | TCAAGCCGGGACTAAAGGTC | 59.388 | 55.000 | 2.18 | 0.00 | 43.79 | 3.85 |
3844 | 10574 | 0.613777 | CTCAAGCCGGGACTAAAGGT | 59.386 | 55.000 | 2.18 | 0.00 | 0.00 | 3.50 |
3857 | 10587 | 2.027625 | CCCGGTTCGTGTCTCAAGC | 61.028 | 63.158 | 0.00 | 0.00 | 0.00 | 4.01 |
3858 | 10588 | 0.666577 | GTCCCGGTTCGTGTCTCAAG | 60.667 | 60.000 | 0.00 | 0.00 | 0.00 | 3.02 |
3873 | 10603 | 1.095807 | GCATCGCACCCTTTAGTCCC | 61.096 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
3898 | 10628 | 1.390565 | CTTGAGATACGACCGGGACT | 58.609 | 55.000 | 6.32 | 0.00 | 0.00 | 3.85 |
3903 | 10634 | 1.299165 | CCGGCTTGAGATACGACCG | 60.299 | 63.158 | 0.00 | 0.00 | 40.30 | 4.79 |
3905 | 10636 | 0.248949 | GTCCCGGCTTGAGATACGAC | 60.249 | 60.000 | 0.00 | 0.00 | 0.00 | 4.34 |
3910 | 10641 | 2.467880 | TCTTTAGTCCCGGCTTGAGAT | 58.532 | 47.619 | 0.00 | 0.00 | 0.00 | 2.75 |
3917 | 10648 | 3.383825 | TCAGTCTAATCTTTAGTCCCGGC | 59.616 | 47.826 | 0.00 | 0.00 | 0.00 | 6.13 |
3918 | 10649 | 5.069251 | ACATCAGTCTAATCTTTAGTCCCGG | 59.931 | 44.000 | 0.00 | 0.00 | 0.00 | 5.73 |
4505 | 11237 | 7.974243 | TTTTCGACATCATATGCAAAAGATG | 57.026 | 32.000 | 18.42 | 18.42 | 42.61 | 2.90 |
4563 | 11300 | 2.726555 | CGTCAAAATCGGATGCAGAG | 57.273 | 50.000 | 0.00 | 0.00 | 0.00 | 3.35 |
4851 | 11639 | 9.270640 | TGTTTGCTGCAATAAAACTGAAATAAT | 57.729 | 25.926 | 16.77 | 0.00 | 35.35 | 1.28 |
4852 | 11640 | 8.654230 | TGTTTGCTGCAATAAAACTGAAATAA | 57.346 | 26.923 | 16.77 | 0.00 | 35.35 | 1.40 |
4853 | 11641 | 8.654230 | TTGTTTGCTGCAATAAAACTGAAATA | 57.346 | 26.923 | 16.77 | 0.00 | 35.35 | 1.40 |
4854 | 11642 | 7.495279 | TCTTGTTTGCTGCAATAAAACTGAAAT | 59.505 | 29.630 | 16.77 | 0.00 | 35.35 | 2.17 |
4855 | 11643 | 6.815641 | TCTTGTTTGCTGCAATAAAACTGAAA | 59.184 | 30.769 | 16.77 | 1.65 | 35.35 | 2.69 |
4856 | 11644 | 6.336566 | TCTTGTTTGCTGCAATAAAACTGAA | 58.663 | 32.000 | 16.77 | 2.31 | 35.35 | 3.02 |
4857 | 11645 | 5.900425 | TCTTGTTTGCTGCAATAAAACTGA | 58.100 | 33.333 | 16.77 | 10.48 | 35.35 | 3.41 |
4858 | 11646 | 6.774354 | ATCTTGTTTGCTGCAATAAAACTG | 57.226 | 33.333 | 16.77 | 8.56 | 35.35 | 3.16 |
4859 | 11647 | 8.885494 | TTTATCTTGTTTGCTGCAATAAAACT | 57.115 | 26.923 | 16.77 | 3.38 | 35.35 | 2.66 |
4860 | 11648 | 9.368921 | GTTTTATCTTGTTTGCTGCAATAAAAC | 57.631 | 29.630 | 26.67 | 26.67 | 35.96 | 2.43 |
4861 | 11649 | 9.102757 | TGTTTTATCTTGTTTGCTGCAATAAAA | 57.897 | 25.926 | 16.77 | 17.66 | 0.00 | 1.52 |
4862 | 11650 | 8.654230 | TGTTTTATCTTGTTTGCTGCAATAAA | 57.346 | 26.923 | 16.77 | 13.12 | 0.00 | 1.40 |
4863 | 11651 | 8.830201 | ATGTTTTATCTTGTTTGCTGCAATAA | 57.170 | 26.923 | 16.77 | 13.11 | 0.00 | 1.40 |
4864 | 11652 | 8.306038 | AGATGTTTTATCTTGTTTGCTGCAATA | 58.694 | 29.630 | 16.77 | 5.83 | 0.00 | 1.90 |
4865 | 11653 | 7.156673 | AGATGTTTTATCTTGTTTGCTGCAAT | 58.843 | 30.769 | 16.77 | 2.37 | 0.00 | 3.56 |
4866 | 11654 | 6.514947 | AGATGTTTTATCTTGTTTGCTGCAA | 58.485 | 32.000 | 11.69 | 11.69 | 0.00 | 4.08 |
4867 | 11655 | 6.088016 | AGATGTTTTATCTTGTTTGCTGCA | 57.912 | 33.333 | 0.00 | 0.00 | 0.00 | 4.41 |
4868 | 11656 | 5.284660 | CGAGATGTTTTATCTTGTTTGCTGC | 59.715 | 40.000 | 0.00 | 0.00 | 0.00 | 5.25 |
4869 | 11657 | 6.602179 | TCGAGATGTTTTATCTTGTTTGCTG | 58.398 | 36.000 | 0.00 | 0.00 | 32.63 | 4.41 |
4870 | 11658 | 6.801539 | TCGAGATGTTTTATCTTGTTTGCT | 57.198 | 33.333 | 0.00 | 0.00 | 32.63 | 3.91 |
4871 | 11659 | 7.803189 | TCTTTCGAGATGTTTTATCTTGTTTGC | 59.197 | 33.333 | 0.00 | 0.00 | 32.63 | 3.68 |
4872 | 11660 | 9.831737 | ATCTTTCGAGATGTTTTATCTTGTTTG | 57.168 | 29.630 | 0.00 | 0.00 | 32.63 | 2.93 |
4874 | 11662 | 9.831737 | CAATCTTTCGAGATGTTTTATCTTGTT | 57.168 | 29.630 | 0.00 | 0.00 | 32.63 | 2.83 |
4875 | 11663 | 8.454106 | CCAATCTTTCGAGATGTTTTATCTTGT | 58.546 | 33.333 | 0.00 | 0.00 | 32.63 | 3.16 |
4876 | 11664 | 7.912250 | CCCAATCTTTCGAGATGTTTTATCTTG | 59.088 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
4877 | 11665 | 7.067494 | CCCCAATCTTTCGAGATGTTTTATCTT | 59.933 | 37.037 | 0.00 | 0.00 | 0.00 | 2.40 |
4878 | 11666 | 6.543831 | CCCCAATCTTTCGAGATGTTTTATCT | 59.456 | 38.462 | 0.00 | 0.00 | 0.00 | 1.98 |
4879 | 11667 | 6.318900 | ACCCCAATCTTTCGAGATGTTTTATC | 59.681 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
4880 | 11668 | 6.187682 | ACCCCAATCTTTCGAGATGTTTTAT | 58.812 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
4881 | 11669 | 5.566469 | ACCCCAATCTTTCGAGATGTTTTA | 58.434 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
4882 | 11670 | 4.407365 | ACCCCAATCTTTCGAGATGTTTT | 58.593 | 39.130 | 0.00 | 0.00 | 0.00 | 2.43 |
4883 | 11671 | 4.034285 | ACCCCAATCTTTCGAGATGTTT | 57.966 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
4884 | 11672 | 3.721087 | ACCCCAATCTTTCGAGATGTT | 57.279 | 42.857 | 0.00 | 0.00 | 0.00 | 2.71 |
4885 | 11673 | 3.775316 | ACTACCCCAATCTTTCGAGATGT | 59.225 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
4886 | 11674 | 4.122776 | CACTACCCCAATCTTTCGAGATG | 58.877 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
4887 | 11675 | 3.775316 | ACACTACCCCAATCTTTCGAGAT | 59.225 | 43.478 | 0.00 | 0.00 | 0.00 | 2.75 |
4888 | 11676 | 3.170717 | ACACTACCCCAATCTTTCGAGA | 58.829 | 45.455 | 0.00 | 0.00 | 0.00 | 4.04 |
4889 | 11677 | 3.611766 | ACACTACCCCAATCTTTCGAG | 57.388 | 47.619 | 0.00 | 0.00 | 0.00 | 4.04 |
4890 | 11678 | 3.558321 | CCAACACTACCCCAATCTTTCGA | 60.558 | 47.826 | 0.00 | 0.00 | 0.00 | 3.71 |
4891 | 11679 | 2.747446 | CCAACACTACCCCAATCTTTCG | 59.253 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
4892 | 11680 | 4.028993 | TCCAACACTACCCCAATCTTTC | 57.971 | 45.455 | 0.00 | 0.00 | 0.00 | 2.62 |
4893 | 11681 | 4.407365 | CTTCCAACACTACCCCAATCTTT | 58.593 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
4894 | 11682 | 3.814316 | GCTTCCAACACTACCCCAATCTT | 60.814 | 47.826 | 0.00 | 0.00 | 0.00 | 2.40 |
4895 | 11683 | 2.290960 | GCTTCCAACACTACCCCAATCT | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 2.40 |
4896 | 11684 | 2.092323 | GCTTCCAACACTACCCCAATC | 58.908 | 52.381 | 0.00 | 0.00 | 0.00 | 2.67 |
4897 | 11685 | 1.613255 | CGCTTCCAACACTACCCCAAT | 60.613 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
4898 | 11686 | 0.250553 | CGCTTCCAACACTACCCCAA | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
4899 | 11687 | 1.122632 | TCGCTTCCAACACTACCCCA | 61.123 | 55.000 | 0.00 | 0.00 | 0.00 | 4.96 |
4900 | 11688 | 0.672711 | GTCGCTTCCAACACTACCCC | 60.673 | 60.000 | 0.00 | 0.00 | 0.00 | 4.95 |
4901 | 11689 | 0.672711 | GGTCGCTTCCAACACTACCC | 60.673 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
4902 | 11690 | 1.012486 | CGGTCGCTTCCAACACTACC | 61.012 | 60.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4903 | 11691 | 1.012486 | CCGGTCGCTTCCAACACTAC | 61.012 | 60.000 | 0.00 | 0.00 | 0.00 | 2.73 |
4904 | 11692 | 1.180456 | TCCGGTCGCTTCCAACACTA | 61.180 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
4905 | 11693 | 1.827399 | ATCCGGTCGCTTCCAACACT | 61.827 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
4906 | 11694 | 1.375523 | ATCCGGTCGCTTCCAACAC | 60.376 | 57.895 | 0.00 | 0.00 | 0.00 | 3.32 |
4907 | 11695 | 1.375396 | CATCCGGTCGCTTCCAACA | 60.375 | 57.895 | 0.00 | 0.00 | 0.00 | 3.33 |
4908 | 11696 | 0.953960 | AACATCCGGTCGCTTCCAAC | 60.954 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
4909 | 11697 | 0.672401 | GAACATCCGGTCGCTTCCAA | 60.672 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
4910 | 11698 | 1.079405 | GAACATCCGGTCGCTTCCA | 60.079 | 57.895 | 0.00 | 0.00 | 0.00 | 3.53 |
4911 | 11699 | 0.391263 | AAGAACATCCGGTCGCTTCC | 60.391 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
4912 | 11700 | 0.721718 | CAAGAACATCCGGTCGCTTC | 59.278 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
4913 | 11701 | 1.298859 | GCAAGAACATCCGGTCGCTT | 61.299 | 55.000 | 0.00 | 0.00 | 0.00 | 4.68 |
4914 | 11702 | 1.741770 | GCAAGAACATCCGGTCGCT | 60.742 | 57.895 | 0.00 | 0.00 | 0.00 | 4.93 |
4915 | 11703 | 1.369091 | ATGCAAGAACATCCGGTCGC | 61.369 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
4916 | 11704 | 0.652592 | GATGCAAGAACATCCGGTCG | 59.347 | 55.000 | 0.00 | 0.00 | 40.52 | 4.79 |
4922 | 11710 | 5.238214 | GGTGAATAGAGGATGCAAGAACATC | 59.762 | 44.000 | 0.00 | 0.00 | 44.73 | 3.06 |
4923 | 11711 | 5.128919 | GGTGAATAGAGGATGCAAGAACAT | 58.871 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
4924 | 11712 | 4.019411 | TGGTGAATAGAGGATGCAAGAACA | 60.019 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
4925 | 11713 | 4.517285 | TGGTGAATAGAGGATGCAAGAAC | 58.483 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
4926 | 11714 | 4.225942 | ACTGGTGAATAGAGGATGCAAGAA | 59.774 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
4927 | 11715 | 3.776969 | ACTGGTGAATAGAGGATGCAAGA | 59.223 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
4928 | 11716 | 3.875727 | CACTGGTGAATAGAGGATGCAAG | 59.124 | 47.826 | 0.00 | 0.00 | 0.00 | 4.01 |
4929 | 11717 | 3.519107 | TCACTGGTGAATAGAGGATGCAA | 59.481 | 43.478 | 0.51 | 0.00 | 36.53 | 4.08 |
4930 | 11718 | 3.106827 | TCACTGGTGAATAGAGGATGCA | 58.893 | 45.455 | 0.51 | 0.00 | 36.53 | 3.96 |
4931 | 11719 | 3.462021 | GTCACTGGTGAATAGAGGATGC | 58.538 | 50.000 | 4.92 | 0.00 | 41.85 | 3.91 |
4932 | 11720 | 3.131223 | ACGTCACTGGTGAATAGAGGATG | 59.869 | 47.826 | 4.92 | 0.00 | 41.85 | 3.51 |
4933 | 11721 | 3.131223 | CACGTCACTGGTGAATAGAGGAT | 59.869 | 47.826 | 4.92 | 0.00 | 41.85 | 3.24 |
4934 | 11722 | 2.492088 | CACGTCACTGGTGAATAGAGGA | 59.508 | 50.000 | 4.92 | 0.00 | 41.85 | 3.71 |
4935 | 11723 | 2.492088 | TCACGTCACTGGTGAATAGAGG | 59.508 | 50.000 | 4.92 | 0.00 | 41.17 | 3.69 |
4936 | 11724 | 3.428180 | CCTCACGTCACTGGTGAATAGAG | 60.428 | 52.174 | 4.92 | 11.25 | 43.27 | 2.43 |
4937 | 11725 | 2.492088 | CCTCACGTCACTGGTGAATAGA | 59.508 | 50.000 | 4.92 | 3.26 | 43.27 | 1.98 |
4938 | 11726 | 2.231478 | ACCTCACGTCACTGGTGAATAG | 59.769 | 50.000 | 4.92 | 3.37 | 43.27 | 1.73 |
4939 | 11727 | 2.244695 | ACCTCACGTCACTGGTGAATA | 58.755 | 47.619 | 4.92 | 0.00 | 43.27 | 1.75 |
4940 | 11728 | 1.048601 | ACCTCACGTCACTGGTGAAT | 58.951 | 50.000 | 4.92 | 0.00 | 43.27 | 2.57 |
4941 | 11729 | 2.511818 | ACCTCACGTCACTGGTGAA | 58.488 | 52.632 | 4.92 | 0.00 | 43.27 | 3.18 |
4942 | 11730 | 4.270482 | ACCTCACGTCACTGGTGA | 57.730 | 55.556 | 0.00 | 0.00 | 41.82 | 4.02 |
4943 | 11731 | 4.343581 | CACCTCACGTCACTGGTG | 57.656 | 61.111 | 10.14 | 10.14 | 42.98 | 4.17 |
4944 | 11732 | 2.088674 | GAGCACCTCACGTCACTGGT | 62.089 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4945 | 11733 | 1.373497 | GAGCACCTCACGTCACTGG | 60.373 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
4946 | 11734 | 1.373497 | GGAGCACCTCACGTCACTG | 60.373 | 63.158 | 0.00 | 0.00 | 31.08 | 3.66 |
4947 | 11735 | 1.832608 | TGGAGCACCTCACGTCACT | 60.833 | 57.895 | 0.71 | 0.00 | 37.04 | 3.41 |
4948 | 11736 | 1.664965 | GTGGAGCACCTCACGTCAC | 60.665 | 63.158 | 0.71 | 0.00 | 37.04 | 3.67 |
4949 | 11737 | 1.471829 | ATGTGGAGCACCTCACGTCA | 61.472 | 55.000 | 7.10 | 0.00 | 41.50 | 4.35 |
4950 | 11738 | 0.320771 | AATGTGGAGCACCTCACGTC | 60.321 | 55.000 | 7.10 | 0.00 | 41.50 | 4.34 |
4951 | 11739 | 0.108585 | AAATGTGGAGCACCTCACGT | 59.891 | 50.000 | 7.10 | 0.00 | 41.50 | 4.49 |
4952 | 11740 | 1.069022 | CAAAATGTGGAGCACCTCACG | 60.069 | 52.381 | 7.10 | 0.00 | 41.50 | 4.35 |
4953 | 11741 | 2.227388 | CTCAAAATGTGGAGCACCTCAC | 59.773 | 50.000 | 7.10 | 0.00 | 41.50 | 3.51 |
4954 | 11742 | 2.507484 | CTCAAAATGTGGAGCACCTCA | 58.493 | 47.619 | 7.40 | 7.40 | 42.60 | 3.86 |
4955 | 11743 | 1.815003 | CCTCAAAATGTGGAGCACCTC | 59.185 | 52.381 | 0.71 | 0.00 | 33.04 | 3.85 |
4956 | 11744 | 1.145738 | ACCTCAAAATGTGGAGCACCT | 59.854 | 47.619 | 0.71 | 0.00 | 34.79 | 4.00 |
4957 | 11745 | 1.620822 | ACCTCAAAATGTGGAGCACC | 58.379 | 50.000 | 5.53 | 0.00 | 34.79 | 5.01 |
4958 | 11746 | 4.072131 | TCTTACCTCAAAATGTGGAGCAC | 58.928 | 43.478 | 5.53 | 0.00 | 34.79 | 4.40 |
4959 | 11747 | 4.365514 | TCTTACCTCAAAATGTGGAGCA | 57.634 | 40.909 | 5.53 | 0.00 | 34.79 | 4.26 |
4960 | 11748 | 4.702131 | ACATCTTACCTCAAAATGTGGAGC | 59.298 | 41.667 | 5.53 | 0.00 | 34.79 | 4.70 |
4961 | 11749 | 5.355350 | GGACATCTTACCTCAAAATGTGGAG | 59.645 | 44.000 | 5.53 | 0.00 | 34.79 | 3.86 |
4962 | 11750 | 5.253330 | GGACATCTTACCTCAAAATGTGGA | 58.747 | 41.667 | 5.53 | 0.00 | 34.79 | 4.02 |
4963 | 11751 | 4.399303 | GGGACATCTTACCTCAAAATGTGG | 59.601 | 45.833 | 0.00 | 0.00 | 37.08 | 4.17 |
4964 | 11752 | 5.009631 | TGGGACATCTTACCTCAAAATGTG | 58.990 | 41.667 | 0.00 | 0.00 | 31.04 | 3.21 |
4965 | 11753 | 5.255397 | TGGGACATCTTACCTCAAAATGT | 57.745 | 39.130 | 0.00 | 0.00 | 33.45 | 2.71 |
4966 | 11754 | 5.711976 | AGTTGGGACATCTTACCTCAAAATG | 59.288 | 40.000 | 0.00 | 0.00 | 39.30 | 2.32 |
4967 | 11755 | 5.711976 | CAGTTGGGACATCTTACCTCAAAAT | 59.288 | 40.000 | 0.00 | 0.00 | 36.05 | 1.82 |
4968 | 11756 | 5.070001 | CAGTTGGGACATCTTACCTCAAAA | 58.930 | 41.667 | 0.00 | 0.00 | 36.05 | 2.44 |
4969 | 11757 | 4.104102 | ACAGTTGGGACATCTTACCTCAAA | 59.896 | 41.667 | 0.00 | 0.00 | 36.05 | 2.69 |
4970 | 11758 | 3.650942 | ACAGTTGGGACATCTTACCTCAA | 59.349 | 43.478 | 0.00 | 0.00 | 36.05 | 3.02 |
4971 | 11759 | 3.248024 | ACAGTTGGGACATCTTACCTCA | 58.752 | 45.455 | 0.00 | 0.00 | 36.05 | 3.86 |
4972 | 11760 | 3.983044 | ACAGTTGGGACATCTTACCTC | 57.017 | 47.619 | 0.00 | 0.00 | 36.05 | 3.85 |
4973 | 11761 | 4.225267 | CCTTACAGTTGGGACATCTTACCT | 59.775 | 45.833 | 0.00 | 0.00 | 36.05 | 3.08 |
4974 | 11762 | 4.224370 | TCCTTACAGTTGGGACATCTTACC | 59.776 | 45.833 | 0.00 | 0.00 | 36.05 | 2.85 |
4975 | 11763 | 5.416271 | TCCTTACAGTTGGGACATCTTAC | 57.584 | 43.478 | 0.00 | 0.00 | 36.05 | 2.34 |
4976 | 11764 | 5.546499 | ACTTCCTTACAGTTGGGACATCTTA | 59.454 | 40.000 | 0.00 | 0.00 | 36.05 | 2.10 |
4977 | 11765 | 4.351111 | ACTTCCTTACAGTTGGGACATCTT | 59.649 | 41.667 | 0.00 | 0.00 | 36.05 | 2.40 |
4978 | 11766 | 3.910627 | ACTTCCTTACAGTTGGGACATCT | 59.089 | 43.478 | 0.00 | 0.00 | 39.20 | 2.90 |
4979 | 11767 | 4.003648 | CACTTCCTTACAGTTGGGACATC | 58.996 | 47.826 | 0.00 | 0.00 | 39.30 | 3.06 |
4980 | 11768 | 3.394606 | ACACTTCCTTACAGTTGGGACAT | 59.605 | 43.478 | 0.00 | 0.00 | 39.30 | 3.06 |
4981 | 11769 | 2.775384 | ACACTTCCTTACAGTTGGGACA | 59.225 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
4982 | 11770 | 3.487120 | ACACTTCCTTACAGTTGGGAC | 57.513 | 47.619 | 0.00 | 0.00 | 0.00 | 4.46 |
4983 | 11771 | 4.485875 | TCTACACTTCCTTACAGTTGGGA | 58.514 | 43.478 | 0.00 | 0.00 | 0.00 | 4.37 |
4984 | 11772 | 4.884668 | TCTACACTTCCTTACAGTTGGG | 57.115 | 45.455 | 0.00 | 0.00 | 0.00 | 4.12 |
4985 | 11773 | 4.995487 | GGTTCTACACTTCCTTACAGTTGG | 59.005 | 45.833 | 0.00 | 0.00 | 0.00 | 3.77 |
4986 | 11774 | 4.995487 | GGGTTCTACACTTCCTTACAGTTG | 59.005 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
4987 | 11775 | 4.906060 | AGGGTTCTACACTTCCTTACAGTT | 59.094 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
4988 | 11776 | 4.490706 | AGGGTTCTACACTTCCTTACAGT | 58.509 | 43.478 | 0.00 | 0.00 | 0.00 | 3.55 |
4989 | 11777 | 5.485209 | AAGGGTTCTACACTTCCTTACAG | 57.515 | 43.478 | 0.00 | 0.00 | 37.21 | 2.74 |
4990 | 11778 | 5.455612 | CCAAAGGGTTCTACACTTCCTTACA | 60.456 | 44.000 | 0.00 | 0.00 | 41.84 | 2.41 |
4991 | 11779 | 5.001874 | CCAAAGGGTTCTACACTTCCTTAC | 58.998 | 45.833 | 0.00 | 0.00 | 41.84 | 2.34 |
4992 | 11780 | 5.237236 | CCAAAGGGTTCTACACTTCCTTA | 57.763 | 43.478 | 0.00 | 0.00 | 41.84 | 2.69 |
4993 | 11781 | 4.100279 | CCAAAGGGTTCTACACTTCCTT | 57.900 | 45.455 | 0.00 | 0.00 | 41.84 | 3.36 |
4994 | 11782 | 3.790089 | CCAAAGGGTTCTACACTTCCT | 57.210 | 47.619 | 0.00 | 0.00 | 41.84 | 3.36 |
5008 | 11796 | 2.747855 | GCTGCCCGAGACCAAAGG | 60.748 | 66.667 | 0.00 | 0.00 | 0.00 | 3.11 |
5009 | 11797 | 2.032528 | TGCTGCCCGAGACCAAAG | 59.967 | 61.111 | 0.00 | 0.00 | 0.00 | 2.77 |
5010 | 11798 | 2.281484 | GTGCTGCCCGAGACCAAA | 60.281 | 61.111 | 0.00 | 0.00 | 0.00 | 3.28 |
5011 | 11799 | 1.549243 | TATGTGCTGCCCGAGACCAA | 61.549 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
5012 | 11800 | 1.337384 | ATATGTGCTGCCCGAGACCA | 61.337 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
5013 | 11801 | 0.679505 | TATATGTGCTGCCCGAGACC | 59.320 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5014 | 11802 | 2.751166 | ATATATGTGCTGCCCGAGAC | 57.249 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
5015 | 11803 | 4.466015 | TCAATATATATGTGCTGCCCGAGA | 59.534 | 41.667 | 0.00 | 0.00 | 0.00 | 4.04 |
5016 | 11804 | 4.758688 | TCAATATATATGTGCTGCCCGAG | 58.241 | 43.478 | 0.00 | 0.00 | 0.00 | 4.63 |
5017 | 11805 | 4.817318 | TCAATATATATGTGCTGCCCGA | 57.183 | 40.909 | 0.00 | 0.00 | 0.00 | 5.14 |
5018 | 11806 | 5.585844 | TGATTCAATATATATGTGCTGCCCG | 59.414 | 40.000 | 0.00 | 0.00 | 0.00 | 6.13 |
5019 | 11807 | 7.578310 | ATGATTCAATATATATGTGCTGCCC | 57.422 | 36.000 | 0.00 | 0.00 | 0.00 | 5.36 |
5020 | 11808 | 7.434307 | GCAATGATTCAATATATATGTGCTGCC | 59.566 | 37.037 | 0.00 | 0.00 | 0.00 | 4.85 |
5021 | 11809 | 7.434307 | GGCAATGATTCAATATATATGTGCTGC | 59.566 | 37.037 | 0.00 | 0.00 | 0.00 | 5.25 |
5022 | 11810 | 7.642586 | CGGCAATGATTCAATATATATGTGCTG | 59.357 | 37.037 | 0.00 | 0.00 | 0.00 | 4.41 |
5023 | 11811 | 7.337689 | ACGGCAATGATTCAATATATATGTGCT | 59.662 | 33.333 | 0.00 | 0.00 | 0.00 | 4.40 |
5024 | 11812 | 7.430211 | CACGGCAATGATTCAATATATATGTGC | 59.570 | 37.037 | 0.00 | 0.00 | 0.00 | 4.57 |
5025 | 11813 | 7.911727 | CCACGGCAATGATTCAATATATATGTG | 59.088 | 37.037 | 0.00 | 0.00 | 0.00 | 3.21 |
5026 | 11814 | 7.415541 | GCCACGGCAATGATTCAATATATATGT | 60.416 | 37.037 | 2.36 | 0.00 | 41.49 | 2.29 |
5027 | 11815 | 6.914215 | GCCACGGCAATGATTCAATATATATG | 59.086 | 38.462 | 2.36 | 0.00 | 41.49 | 1.78 |
5028 | 11816 | 6.830324 | AGCCACGGCAATGATTCAATATATAT | 59.170 | 34.615 | 11.35 | 0.00 | 44.88 | 0.86 |
5029 | 11817 | 6.179756 | AGCCACGGCAATGATTCAATATATA | 58.820 | 36.000 | 11.35 | 0.00 | 44.88 | 0.86 |
5030 | 11818 | 5.012239 | AGCCACGGCAATGATTCAATATAT | 58.988 | 37.500 | 11.35 | 0.00 | 44.88 | 0.86 |
5031 | 11819 | 4.397420 | AGCCACGGCAATGATTCAATATA | 58.603 | 39.130 | 11.35 | 0.00 | 44.88 | 0.86 |
5032 | 11820 | 3.225104 | AGCCACGGCAATGATTCAATAT | 58.775 | 40.909 | 11.35 | 0.00 | 44.88 | 1.28 |
5033 | 11821 | 2.653726 | AGCCACGGCAATGATTCAATA | 58.346 | 42.857 | 11.35 | 0.00 | 44.88 | 1.90 |
5034 | 11822 | 1.477553 | AGCCACGGCAATGATTCAAT | 58.522 | 45.000 | 11.35 | 0.00 | 44.88 | 2.57 |
5035 | 11823 | 1.255882 | AAGCCACGGCAATGATTCAA | 58.744 | 45.000 | 11.35 | 0.00 | 44.88 | 2.69 |
5036 | 11824 | 1.742831 | GTAAGCCACGGCAATGATTCA | 59.257 | 47.619 | 11.35 | 0.00 | 44.88 | 2.57 |
5037 | 11825 | 1.742831 | TGTAAGCCACGGCAATGATTC | 59.257 | 47.619 | 11.35 | 0.00 | 44.88 | 2.52 |
5038 | 11826 | 1.832883 | TGTAAGCCACGGCAATGATT | 58.167 | 45.000 | 11.35 | 0.00 | 44.88 | 2.57 |
5039 | 11827 | 1.745087 | CTTGTAAGCCACGGCAATGAT | 59.255 | 47.619 | 11.35 | 0.00 | 44.88 | 2.45 |
5040 | 11828 | 1.164411 | CTTGTAAGCCACGGCAATGA | 58.836 | 50.000 | 11.35 | 0.00 | 44.88 | 2.57 |
5041 | 11829 | 1.164411 | TCTTGTAAGCCACGGCAATG | 58.836 | 50.000 | 11.35 | 0.00 | 44.88 | 2.82 |
5042 | 11830 | 2.128771 | ATCTTGTAAGCCACGGCAAT | 57.871 | 45.000 | 11.35 | 1.02 | 44.88 | 3.56 |
5043 | 11831 | 1.539388 | CAATCTTGTAAGCCACGGCAA | 59.461 | 47.619 | 11.35 | 0.00 | 44.88 | 4.52 |
5044 | 11832 | 1.164411 | CAATCTTGTAAGCCACGGCA | 58.836 | 50.000 | 11.35 | 0.00 | 44.88 | 5.69 |
5045 | 11833 | 0.451783 | CCAATCTTGTAAGCCACGGC | 59.548 | 55.000 | 0.00 | 0.00 | 42.33 | 5.68 |
5046 | 11834 | 1.094785 | CCCAATCTTGTAAGCCACGG | 58.905 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
5047 | 11835 | 2.009774 | CTCCCAATCTTGTAAGCCACG | 58.990 | 52.381 | 0.00 | 0.00 | 0.00 | 4.94 |
5048 | 11836 | 2.290960 | ACCTCCCAATCTTGTAAGCCAC | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 5.01 |
5049 | 11837 | 1.992557 | ACCTCCCAATCTTGTAAGCCA | 59.007 | 47.619 | 0.00 | 0.00 | 0.00 | 4.75 |
5050 | 11838 | 2.755103 | CAACCTCCCAATCTTGTAAGCC | 59.245 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
5051 | 11839 | 3.421844 | ACAACCTCCCAATCTTGTAAGC | 58.578 | 45.455 | 0.00 | 0.00 | 0.00 | 3.09 |
5052 | 11840 | 4.218417 | CCAACAACCTCCCAATCTTGTAAG | 59.782 | 45.833 | 0.00 | 0.00 | 0.00 | 2.34 |
5053 | 11841 | 4.148838 | CCAACAACCTCCCAATCTTGTAA | 58.851 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
5054 | 11842 | 3.499563 | CCCAACAACCTCCCAATCTTGTA | 60.500 | 47.826 | 0.00 | 0.00 | 0.00 | 2.41 |
5055 | 11843 | 2.597455 | CCAACAACCTCCCAATCTTGT | 58.403 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
5056 | 11844 | 1.895131 | CCCAACAACCTCCCAATCTTG | 59.105 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
5057 | 11845 | 1.786441 | TCCCAACAACCTCCCAATCTT | 59.214 | 47.619 | 0.00 | 0.00 | 0.00 | 2.40 |
5058 | 11846 | 1.075536 | GTCCCAACAACCTCCCAATCT | 59.924 | 52.381 | 0.00 | 0.00 | 0.00 | 2.40 |
5059 | 11847 | 1.075536 | AGTCCCAACAACCTCCCAATC | 59.924 | 52.381 | 0.00 | 0.00 | 0.00 | 2.67 |
5060 | 11848 | 1.075536 | GAGTCCCAACAACCTCCCAAT | 59.924 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
5061 | 11849 | 0.476771 | GAGTCCCAACAACCTCCCAA | 59.523 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
5062 | 11850 | 0.401395 | AGAGTCCCAACAACCTCCCA | 60.401 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
5063 | 11851 | 0.771755 | AAGAGTCCCAACAACCTCCC | 59.228 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5064 | 11852 | 1.420138 | TCAAGAGTCCCAACAACCTCC | 59.580 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
5065 | 11853 | 2.368875 | TCTCAAGAGTCCCAACAACCTC | 59.631 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5066 | 11854 | 2.370189 | CTCTCAAGAGTCCCAACAACCT | 59.630 | 50.000 | 0.00 | 0.00 | 37.40 | 3.50 |
5067 | 11855 | 2.772287 | CTCTCAAGAGTCCCAACAACC | 58.228 | 52.381 | 0.00 | 0.00 | 37.40 | 3.77 |
5079 | 11867 | 3.502595 | CCTCTCGTGTACAACTCTCAAGA | 59.497 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
5080 | 11868 | 3.366476 | CCCTCTCGTGTACAACTCTCAAG | 60.366 | 52.174 | 0.00 | 0.00 | 0.00 | 3.02 |
5081 | 11869 | 2.557056 | CCCTCTCGTGTACAACTCTCAA | 59.443 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5082 | 11870 | 2.160205 | CCCTCTCGTGTACAACTCTCA | 58.840 | 52.381 | 0.00 | 0.00 | 0.00 | 3.27 |
5083 | 11871 | 2.420722 | CTCCCTCTCGTGTACAACTCTC | 59.579 | 54.545 | 0.00 | 0.00 | 0.00 | 3.20 |
5084 | 11872 | 2.040012 | TCTCCCTCTCGTGTACAACTCT | 59.960 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
5085 | 11873 | 2.434428 | TCTCCCTCTCGTGTACAACTC | 58.566 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
5086 | 11874 | 2.581216 | TCTCCCTCTCGTGTACAACT | 57.419 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
5087 | 11875 | 3.255149 | TCTTTCTCCCTCTCGTGTACAAC | 59.745 | 47.826 | 0.00 | 0.00 | 0.00 | 3.32 |
5088 | 11876 | 3.493334 | TCTTTCTCCCTCTCGTGTACAA | 58.507 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
5089 | 11877 | 3.082548 | CTCTTTCTCCCTCTCGTGTACA | 58.917 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
5090 | 11878 | 3.345414 | TCTCTTTCTCCCTCTCGTGTAC | 58.655 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
5091 | 11879 | 3.263681 | TCTCTCTTTCTCCCTCTCGTGTA | 59.736 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
5092 | 11880 | 2.040545 | TCTCTCTTTCTCCCTCTCGTGT | 59.959 | 50.000 | 0.00 | 0.00 | 0.00 | 4.49 |
5093 | 11881 | 2.717390 | TCTCTCTTTCTCCCTCTCGTG | 58.283 | 52.381 | 0.00 | 0.00 | 0.00 | 4.35 |
5094 | 11882 | 3.662759 | ATCTCTCTTTCTCCCTCTCGT | 57.337 | 47.619 | 0.00 | 0.00 | 0.00 | 4.18 |
5095 | 11883 | 4.884744 | TGTAATCTCTCTTTCTCCCTCTCG | 59.115 | 45.833 | 0.00 | 0.00 | 0.00 | 4.04 |
5096 | 11884 | 6.976934 | ATGTAATCTCTCTTTCTCCCTCTC | 57.023 | 41.667 | 0.00 | 0.00 | 0.00 | 3.20 |
5097 | 11885 | 6.900186 | TCAATGTAATCTCTCTTTCTCCCTCT | 59.100 | 38.462 | 0.00 | 0.00 | 0.00 | 3.69 |
5098 | 11886 | 7.118496 | TCAATGTAATCTCTCTTTCTCCCTC | 57.882 | 40.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5099 | 11887 | 6.099557 | CCTCAATGTAATCTCTCTTTCTCCCT | 59.900 | 42.308 | 0.00 | 0.00 | 0.00 | 4.20 |
5100 | 11888 | 6.287525 | CCTCAATGTAATCTCTCTTTCTCCC | 58.712 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5101 | 11889 | 6.098982 | TCCCTCAATGTAATCTCTCTTTCTCC | 59.901 | 42.308 | 0.00 | 0.00 | 0.00 | 3.71 |
5102 | 11890 | 7.069331 | TCTCCCTCAATGTAATCTCTCTTTCTC | 59.931 | 40.741 | 0.00 | 0.00 | 0.00 | 2.87 |
5103 | 11891 | 6.900186 | TCTCCCTCAATGTAATCTCTCTTTCT | 59.100 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
5104 | 11892 | 7.118496 | TCTCCCTCAATGTAATCTCTCTTTC | 57.882 | 40.000 | 0.00 | 0.00 | 0.00 | 2.62 |
5105 | 11893 | 7.181845 | ACTTCTCCCTCAATGTAATCTCTCTTT | 59.818 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
5106 | 11894 | 6.671779 | ACTTCTCCCTCAATGTAATCTCTCTT | 59.328 | 38.462 | 0.00 | 0.00 | 0.00 | 2.85 |
5107 | 11895 | 6.201591 | ACTTCTCCCTCAATGTAATCTCTCT | 58.798 | 40.000 | 0.00 | 0.00 | 0.00 | 3.10 |
5108 | 11896 | 6.478512 | ACTTCTCCCTCAATGTAATCTCTC | 57.521 | 41.667 | 0.00 | 0.00 | 0.00 | 3.20 |
5109 | 11897 | 6.882768 | AACTTCTCCCTCAATGTAATCTCT | 57.117 | 37.500 | 0.00 | 0.00 | 0.00 | 3.10 |
5110 | 11898 | 9.103861 | CTTAAACTTCTCCCTCAATGTAATCTC | 57.896 | 37.037 | 0.00 | 0.00 | 0.00 | 2.75 |
5111 | 11899 | 7.554476 | GCTTAAACTTCTCCCTCAATGTAATCT | 59.446 | 37.037 | 0.00 | 0.00 | 0.00 | 2.40 |
5112 | 11900 | 7.336931 | TGCTTAAACTTCTCCCTCAATGTAATC | 59.663 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
5113 | 11901 | 7.175104 | TGCTTAAACTTCTCCCTCAATGTAAT | 58.825 | 34.615 | 0.00 | 0.00 | 0.00 | 1.89 |
5114 | 11902 | 6.539173 | TGCTTAAACTTCTCCCTCAATGTAA | 58.461 | 36.000 | 0.00 | 0.00 | 0.00 | 2.41 |
5115 | 11903 | 6.013725 | TCTGCTTAAACTTCTCCCTCAATGTA | 60.014 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
5116 | 11904 | 4.985538 | TGCTTAAACTTCTCCCTCAATGT | 58.014 | 39.130 | 0.00 | 0.00 | 0.00 | 2.71 |
5117 | 11905 | 5.248640 | TCTGCTTAAACTTCTCCCTCAATG | 58.751 | 41.667 | 0.00 | 0.00 | 0.00 | 2.82 |
5118 | 11906 | 5.505181 | TCTGCTTAAACTTCTCCCTCAAT | 57.495 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
5119 | 11907 | 4.974645 | TCTGCTTAAACTTCTCCCTCAA | 57.025 | 40.909 | 0.00 | 0.00 | 0.00 | 3.02 |
5120 | 11908 | 4.593206 | TCTTCTGCTTAAACTTCTCCCTCA | 59.407 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
5121 | 11909 | 5.153950 | TCTTCTGCTTAAACTTCTCCCTC | 57.846 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
5122 | 11910 | 5.308237 | TCTTCTTCTGCTTAAACTTCTCCCT | 59.692 | 40.000 | 0.00 | 0.00 | 0.00 | 4.20 |
5133 | 11921 | 8.988546 | ACATAGTCTATCTCTTCTTCTGCTTA | 57.011 | 34.615 | 0.00 | 0.00 | 0.00 | 3.09 |
5156 | 11947 | 9.890629 | ATAGAGATATGCTTGTCTGTTTAAACA | 57.109 | 29.630 | 19.53 | 19.53 | 37.37 | 2.83 |
5190 | 11993 | 1.414550 | GATTGAGGGGGAGTGCTAGAC | 59.585 | 57.143 | 0.00 | 0.00 | 0.00 | 2.59 |
5195 | 11998 | 0.620556 | TTCAGATTGAGGGGGAGTGC | 59.379 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
5229 | 12032 | 6.591935 | ACTTCAAGTACAATCTCAACCTTGA | 58.408 | 36.000 | 0.00 | 0.00 | 35.57 | 3.02 |
5262 | 12066 | 6.884832 | TCACAAAACCTCTTAGAGTGAGAAA | 58.115 | 36.000 | 8.55 | 0.00 | 33.68 | 2.52 |
5269 | 12073 | 3.433615 | CGGCTTCACAAAACCTCTTAGAG | 59.566 | 47.826 | 1.56 | 1.56 | 0.00 | 2.43 |
5291 | 12095 | 2.961526 | TTGGAGATCAACTAGCCGAC | 57.038 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
5294 | 12098 | 4.156455 | TCCAATTGGAGATCAACTAGCC | 57.844 | 45.455 | 23.63 | 0.00 | 39.78 | 3.93 |
5310 | 12114 | 7.067494 | GCTACTTGACATAAGGTTCATTCCAAT | 59.933 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
5355 | 12159 | 7.769272 | TTGAGGTTGATTTTCACATTTTCAC | 57.231 | 32.000 | 0.00 | 0.00 | 0.00 | 3.18 |
5359 | 12163 | 9.643693 | GACATATTGAGGTTGATTTTCACATTT | 57.356 | 29.630 | 0.00 | 0.00 | 0.00 | 2.32 |
5362 | 12166 | 8.298854 | CAAGACATATTGAGGTTGATTTTCACA | 58.701 | 33.333 | 0.00 | 0.00 | 31.55 | 3.58 |
5385 | 12189 | 1.130955 | GTTTTCCATGCACGCACAAG | 58.869 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
5408 | 12212 | 5.129320 | TGGTGCAATCTATCTCTCAGCTAAA | 59.871 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
5424 | 12228 | 6.982160 | ATGGTGTGATAATATTGGTGCAAT | 57.018 | 33.333 | 0.00 | 0.00 | 37.80 | 3.56 |
5540 | 12345 | 0.459489 | GTACTGAGGCTGAGGCTGAG | 59.541 | 60.000 | 20.10 | 20.10 | 44.07 | 3.35 |
5541 | 12346 | 0.040351 | AGTACTGAGGCTGAGGCTGA | 59.960 | 55.000 | 15.18 | 3.44 | 38.98 | 4.26 |
5542 | 12347 | 0.901124 | AAGTACTGAGGCTGAGGCTG | 59.099 | 55.000 | 15.18 | 1.92 | 38.98 | 4.85 |
5543 | 12348 | 0.901124 | CAAGTACTGAGGCTGAGGCT | 59.099 | 55.000 | 8.79 | 8.79 | 42.48 | 4.58 |
5544 | 12349 | 0.898320 | TCAAGTACTGAGGCTGAGGC | 59.102 | 55.000 | 5.82 | 0.00 | 37.82 | 4.70 |
5545 | 12350 | 3.030291 | AGATCAAGTACTGAGGCTGAGG | 58.970 | 50.000 | 5.82 | 0.00 | 37.52 | 3.86 |
5617 | 12422 | 6.252995 | TCCAGAGGTGGTTTTGCTATATTTT | 58.747 | 36.000 | 0.00 | 0.00 | 45.28 | 1.82 |
5637 | 12442 | 3.131755 | TGTGCTGATGACAGTAGATCCAG | 59.868 | 47.826 | 0.00 | 0.00 | 45.04 | 3.86 |
5778 | 12925 | 1.086067 | CATGCACCTACCACTGCTCG | 61.086 | 60.000 | 0.00 | 0.00 | 34.29 | 5.03 |
5845 | 12992 | 4.585581 | TCATGGGTCAATATTTGCATGGAG | 59.414 | 41.667 | 0.00 | 0.00 | 32.79 | 3.86 |
5846 | 12993 | 4.544683 | TCATGGGTCAATATTTGCATGGA | 58.455 | 39.130 | 0.00 | 0.00 | 32.79 | 3.41 |
5847 | 12994 | 4.940905 | TCATGGGTCAATATTTGCATGG | 57.059 | 40.909 | 0.00 | 0.00 | 32.79 | 3.66 |
5848 | 12995 | 5.694458 | CACATCATGGGTCAATATTTGCATG | 59.306 | 40.000 | 0.00 | 0.00 | 33.03 | 4.06 |
5849 | 12996 | 5.740803 | GCACATCATGGGTCAATATTTGCAT | 60.741 | 40.000 | 0.00 | 0.00 | 0.00 | 3.96 |
5850 | 12997 | 4.441773 | GCACATCATGGGTCAATATTTGCA | 60.442 | 41.667 | 0.00 | 0.00 | 0.00 | 4.08 |
5851 | 12998 | 4.053295 | GCACATCATGGGTCAATATTTGC | 58.947 | 43.478 | 0.00 | 0.00 | 0.00 | 3.68 |
5861 | 13008 | 1.765314 | GAGTAGGAGCACATCATGGGT | 59.235 | 52.381 | 0.00 | 0.00 | 0.00 | 4.51 |
5862 | 13009 | 1.071385 | GGAGTAGGAGCACATCATGGG | 59.929 | 57.143 | 0.00 | 0.00 | 0.00 | 4.00 |
5863 | 13010 | 2.045524 | AGGAGTAGGAGCACATCATGG | 58.954 | 52.381 | 0.00 | 0.00 | 0.00 | 3.66 |
5864 | 13011 | 3.894427 | AGTAGGAGTAGGAGCACATCATG | 59.106 | 47.826 | 0.00 | 0.00 | 0.00 | 3.07 |
5865 | 13012 | 3.894427 | CAGTAGGAGTAGGAGCACATCAT | 59.106 | 47.826 | 0.00 | 0.00 | 0.00 | 2.45 |
5866 | 13013 | 3.291584 | CAGTAGGAGTAGGAGCACATCA | 58.708 | 50.000 | 0.00 | 0.00 | 0.00 | 3.07 |
5867 | 13014 | 2.035321 | GCAGTAGGAGTAGGAGCACATC | 59.965 | 54.545 | 0.00 | 0.00 | 0.00 | 3.06 |
5868 | 13015 | 2.035632 | GCAGTAGGAGTAGGAGCACAT | 58.964 | 52.381 | 0.00 | 0.00 | 0.00 | 3.21 |
5869 | 13016 | 1.272480 | TGCAGTAGGAGTAGGAGCACA | 60.272 | 52.381 | 0.00 | 0.00 | 0.00 | 4.57 |
5870 | 13017 | 1.475403 | TGCAGTAGGAGTAGGAGCAC | 58.525 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
5871 | 13018 | 2.034878 | CATGCAGTAGGAGTAGGAGCA | 58.965 | 52.381 | 0.00 | 0.00 | 34.78 | 4.26 |
5872 | 13019 | 2.035321 | GTCATGCAGTAGGAGTAGGAGC | 59.965 | 54.545 | 0.00 | 0.00 | 0.00 | 4.70 |
5873 | 13020 | 3.317711 | CAGTCATGCAGTAGGAGTAGGAG | 59.682 | 52.174 | 0.00 | 0.00 | 0.00 | 3.69 |
5874 | 13021 | 3.291584 | CAGTCATGCAGTAGGAGTAGGA | 58.708 | 50.000 | 0.00 | 0.00 | 0.00 | 2.94 |
5875 | 13022 | 3.724508 | CAGTCATGCAGTAGGAGTAGG | 57.275 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.