Multiple sequence alignment - TraesCS1D01G004700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G004700 chr1D 100.000 6403 0 0 1 6403 2145723 2139321 0.000000e+00 11825.0
1 TraesCS1D01G004700 chr1D 100.000 434 0 0 6722 7155 2139002 2138569 0.000000e+00 802.0
2 TraesCS1D01G004700 chr1A 90.885 5562 314 94 935 6402 1238026 1232564 0.000000e+00 7284.0
3 TraesCS1D01G004700 chr1A 93.054 691 31 5 3588 4270 471463349 471462668 0.000000e+00 994.0
4 TraesCS1D01G004700 chr1A 96.809 94 3 0 7029 7122 1232060 1231967 2.670000e-34 158.0
5 TraesCS1D01G004700 chr1A 91.150 113 6 1 6722 6830 1232421 1232309 4.470000e-32 150.0
6 TraesCS1D01G004700 chr1A 95.000 60 0 2 797 853 1238183 1238124 2.750000e-14 91.6
7 TraesCS1D01G004700 chr1B 92.025 2420 120 24 1911 4272 1434815 1432411 0.000000e+00 3332.0
8 TraesCS1D01G004700 chr1B 91.595 2082 98 39 4372 6396 1432353 1430292 0.000000e+00 2804.0
9 TraesCS1D01G004700 chr1B 81.352 1775 120 88 83 1736 1436668 1434984 0.000000e+00 1249.0
10 TraesCS1D01G004700 chr1B 88.824 170 6 7 6984 7149 1429667 1429507 5.660000e-46 196.0
11 TraesCS1D01G004700 chr1B 90.604 149 6 5 6260 6402 1490352 1490498 2.630000e-44 191.0
12 TraesCS1D01G004700 chr1B 84.393 173 16 4 83 247 53605176 53605345 7.430000e-35 159.0
13 TraesCS1D01G004700 chr1B 90.265 113 3 3 6761 6865 1430100 1429988 2.690000e-29 141.0
14 TraesCS1D01G004700 chr5A 93.023 688 33 10 3588 4270 341695477 341694800 0.000000e+00 990.0
15 TraesCS1D01G004700 chr2A 92.041 691 38 5 3588 4270 538363437 538364118 0.000000e+00 955.0
16 TraesCS1D01G004700 chr3B 87.913 786 41 15 3530 4309 131569102 131569839 0.000000e+00 876.0
17 TraesCS1D01G004700 chr3B 86.224 392 39 8 2782 3163 131528734 131529120 1.860000e-110 411.0
18 TraesCS1D01G004700 chr3B 86.879 282 16 3 3529 3810 131539509 131539769 5.430000e-76 296.0
19 TraesCS1D01G004700 chr3B 92.105 152 6 2 7010 7155 815057173 815057022 7.270000e-50 209.0
20 TraesCS1D01G004700 chr3B 91.447 152 7 2 7010 7155 821886177 821886026 3.380000e-48 204.0
21 TraesCS1D01G004700 chr3B 86.286 175 17 4 81 249 13893818 13893991 4.410000e-42 183.0
22 TraesCS1D01G004700 chr3B 84.184 196 8 11 3235 3415 131538932 131539119 1.230000e-37 169.0
23 TraesCS1D01G004700 chr3B 89.076 119 7 2 7043 7155 688179863 688179981 7.480000e-30 143.0
24 TraesCS1D01G004700 chr3B 98.462 65 1 0 3171 3235 131538784 131538848 1.630000e-21 115.0
25 TraesCS1D01G004700 chr5B 91.944 571 30 6 3702 4272 310052570 310053124 0.000000e+00 785.0
26 TraesCS1D01G004700 chr5B 88.432 389 24 10 3345 3714 310044756 310045142 3.940000e-122 449.0
27 TraesCS1D01G004700 chr4A 82.909 275 23 13 6891 7155 670391993 670392253 7.220000e-55 226.0
28 TraesCS1D01G004700 chr4A 88.398 181 8 5 6979 7155 733317903 733318074 9.410000e-49 206.0
29 TraesCS1D01G004700 chr4A 87.845 181 9 7 6979 7155 733327366 733327537 4.380000e-47 200.0
30 TraesCS1D01G004700 chr4A 84.211 76 6 5 7086 7155 674317165 674317090 1.290000e-07 69.4
31 TraesCS1D01G004700 chr6B 91.724 145 7 1 7010 7149 105314139 105313995 5.660000e-46 196.0
32 TraesCS1D01G004700 chr2B 94.872 39 2 0 336 374 542256711 542256673 2.160000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G004700 chr1D 2138569 2145723 7154 True 6313.5 11825 100.0000 1 7155 2 chr1D.!!$R1 7154
1 TraesCS1D01G004700 chr1A 1231967 1238183 6216 True 1920.9 7284 93.4610 797 7122 4 chr1A.!!$R2 6325
2 TraesCS1D01G004700 chr1A 471462668 471463349 681 True 994.0 994 93.0540 3588 4270 1 chr1A.!!$R1 682
3 TraesCS1D01G004700 chr1B 1429507 1436668 7161 True 1544.4 3332 88.8122 83 7149 5 chr1B.!!$R1 7066
4 TraesCS1D01G004700 chr5A 341694800 341695477 677 True 990.0 990 93.0230 3588 4270 1 chr5A.!!$R1 682
5 TraesCS1D01G004700 chr2A 538363437 538364118 681 False 955.0 955 92.0410 3588 4270 1 chr2A.!!$F1 682
6 TraesCS1D01G004700 chr3B 131569102 131569839 737 False 876.0 876 87.9130 3530 4309 1 chr3B.!!$F3 779
7 TraesCS1D01G004700 chr5B 310052570 310053124 554 False 785.0 785 91.9440 3702 4272 1 chr5B.!!$F2 570

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
404 426 0.035317 GCCAAAAGGAGGCCAAAAGG 59.965 55.0 5.01 0.0 46.50 3.11 F
949 1053 0.105194 TCCTCCAGGACACACAAGGA 60.105 55.0 0.00 0.0 39.78 3.36 F
2497 2700 0.179084 TCATTTCGGTCATCGGCTCC 60.179 55.0 0.00 0.0 39.77 4.70 F
3265 3468 0.548031 TGCATGAGTTGGATCCCTCC 59.452 55.0 9.90 0.0 42.45 4.30 F
4801 5103 0.101040 CAATTGGCGATGGTGCGAAT 59.899 50.0 0.00 0.0 43.81 3.34 F
4837 5139 0.104934 AGGAGGCAGATATCGGGGTT 60.105 55.0 4.98 0.0 0.00 4.11 F
5292 5604 0.109458 CAAGGTACGCTCACGCTACA 60.109 55.0 0.00 0.0 45.53 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1801 1959 0.538287 AGCAAAGGACCTGAGGTTGC 60.538 55.0 16.24 16.24 36.36 4.17 R
2528 2731 0.703488 TTCATCCTGCCATCCACCAA 59.297 50.0 0.00 0.00 0.00 3.67 R
3790 4033 0.529337 AATCTGCAGCCTCGTCGATG 60.529 55.0 9.47 0.00 0.00 3.84 R
5120 5432 0.388134 CGTACAGGAACAGGGTCACG 60.388 60.0 0.00 0.00 0.00 4.35 R
6111 6441 0.525455 TGATTGCGACGATGAGTCCG 60.525 55.0 0.00 0.00 46.92 4.79 R
6124 6457 0.664166 CAACGGTGGCTTGTGATTGC 60.664 55.0 0.00 0.00 0.00 3.56 R
6848 7266 0.040499 GGGCCCCTTTGAACACCATA 59.960 55.0 12.23 0.00 0.00 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 9.543231 TGTAAAGAGTTCTAATAAGGAAGAGGA 57.457 33.333 0.00 0.00 0.00 3.71
36 37 7.669089 AAGAGTTCTAATAAGGAAGAGGAGG 57.331 40.000 0.00 0.00 0.00 4.30
37 38 6.987557 AGAGTTCTAATAAGGAAGAGGAGGA 58.012 40.000 0.00 0.00 0.00 3.71
38 39 7.423341 AGAGTTCTAATAAGGAAGAGGAGGAA 58.577 38.462 0.00 0.00 0.00 3.36
39 40 7.563556 AGAGTTCTAATAAGGAAGAGGAGGAAG 59.436 40.741 0.00 0.00 0.00 3.46
40 41 6.099125 AGTTCTAATAAGGAAGAGGAGGAAGC 59.901 42.308 0.00 0.00 0.00 3.86
41 42 5.782925 TCTAATAAGGAAGAGGAGGAAGCT 58.217 41.667 0.00 0.00 0.00 3.74
42 43 6.206042 TCTAATAAGGAAGAGGAGGAAGCTT 58.794 40.000 0.00 0.00 0.00 3.74
43 44 5.366482 AATAAGGAAGAGGAGGAAGCTTC 57.634 43.478 18.54 18.54 37.80 3.86
44 45 2.640284 AGGAAGAGGAGGAAGCTTCT 57.360 50.000 25.05 11.81 38.41 2.85
45 46 3.767309 AGGAAGAGGAGGAAGCTTCTA 57.233 47.619 25.05 0.00 38.41 2.10
46 47 4.279288 AGGAAGAGGAGGAAGCTTCTAT 57.721 45.455 25.05 14.65 38.41 1.98
47 48 4.223144 AGGAAGAGGAGGAAGCTTCTATC 58.777 47.826 25.05 21.21 38.41 2.08
48 49 4.078630 AGGAAGAGGAGGAAGCTTCTATCT 60.079 45.833 25.05 18.40 38.41 1.98
49 50 5.135362 AGGAAGAGGAGGAAGCTTCTATCTA 59.865 44.000 25.05 0.00 38.41 1.98
50 51 5.476945 GGAAGAGGAGGAAGCTTCTATCTAG 59.523 48.000 25.05 0.00 38.41 2.43
51 52 5.663158 AGAGGAGGAAGCTTCTATCTAGT 57.337 43.478 25.05 12.27 0.00 2.57
52 53 6.773583 AGAGGAGGAAGCTTCTATCTAGTA 57.226 41.667 25.05 0.00 0.00 1.82
53 54 6.779860 AGAGGAGGAAGCTTCTATCTAGTAG 58.220 44.000 25.05 0.00 0.00 2.57
54 55 6.331837 AGAGGAGGAAGCTTCTATCTAGTAGT 59.668 42.308 25.05 6.85 0.00 2.73
55 56 7.514820 AGAGGAGGAAGCTTCTATCTAGTAGTA 59.485 40.741 25.05 0.00 0.00 1.82
56 57 7.455891 AGGAGGAAGCTTCTATCTAGTAGTAC 58.544 42.308 25.05 4.55 0.00 2.73
57 58 7.294008 AGGAGGAAGCTTCTATCTAGTAGTACT 59.706 40.741 25.05 8.14 0.00 2.73
58 59 7.605309 GGAGGAAGCTTCTATCTAGTAGTACTC 59.395 44.444 25.05 16.57 0.00 2.59
59 60 7.455891 AGGAAGCTTCTATCTAGTAGTACTCC 58.544 42.308 25.05 3.74 0.00 3.85
60 61 7.294008 AGGAAGCTTCTATCTAGTAGTACTCCT 59.706 40.741 25.05 6.13 0.00 3.69
61 62 8.596293 GGAAGCTTCTATCTAGTAGTACTCCTA 58.404 40.741 25.05 0.00 0.00 2.94
71 72 8.632906 TCTAGTAGTACTCCTAATTACCATGC 57.367 38.462 5.96 0.00 0.00 4.06
72 73 8.222637 TCTAGTAGTACTCCTAATTACCATGCA 58.777 37.037 5.96 0.00 0.00 3.96
73 74 7.670605 AGTAGTACTCCTAATTACCATGCAA 57.329 36.000 0.00 0.00 0.00 4.08
74 75 8.086143 AGTAGTACTCCTAATTACCATGCAAA 57.914 34.615 0.00 0.00 0.00 3.68
75 76 8.545472 AGTAGTACTCCTAATTACCATGCAAAA 58.455 33.333 0.00 0.00 0.00 2.44
76 77 9.169592 GTAGTACTCCTAATTACCATGCAAAAA 57.830 33.333 0.00 0.00 0.00 1.94
123 124 7.872993 TCTTCTTCTTGTTCACACTGGTAATAG 59.127 37.037 0.00 0.00 0.00 1.73
124 125 7.062749 TCTTCTTGTTCACACTGGTAATAGT 57.937 36.000 0.00 0.00 0.00 2.12
130 131 9.871238 CTTGTTCACACTGGTAATAGTATTACT 57.129 33.333 25.19 9.40 0.00 2.24
175 176 0.251787 AGGCCCAATGAAAGTCACCC 60.252 55.000 0.00 0.00 0.00 4.61
179 180 1.256812 CCAATGAAAGTCACCCCCAC 58.743 55.000 0.00 0.00 0.00 4.61
185 189 1.585651 AAAGTCACCCCCACCACCAA 61.586 55.000 0.00 0.00 0.00 3.67
194 198 1.477553 CCCACCACCAAATGAGATGG 58.522 55.000 0.00 0.00 43.84 3.51
198 202 2.100252 CACCACCAAATGAGATGGATGC 59.900 50.000 0.00 0.00 40.56 3.91
202 206 3.634910 CACCAAATGAGATGGATGCATGA 59.365 43.478 2.46 0.00 40.56 3.07
207 211 6.462347 CCAAATGAGATGGATGCATGAATGAA 60.462 38.462 2.46 0.00 40.56 2.57
222 226 5.867903 TGAATGAAAAAGTCAACCATGGT 57.132 34.783 13.00 13.00 40.50 3.55
223 227 5.599732 TGAATGAAAAAGTCAACCATGGTG 58.400 37.500 20.60 12.88 40.50 4.17
224 228 5.362143 TGAATGAAAAAGTCAACCATGGTGA 59.638 36.000 20.60 15.11 40.50 4.02
225 229 4.647424 TGAAAAAGTCAACCATGGTGAC 57.353 40.909 26.88 26.88 31.51 3.67
226 230 4.277476 TGAAAAAGTCAACCATGGTGACT 58.723 39.130 29.29 29.29 43.84 3.41
243 259 0.039074 ACTGAGTGGCGTCTCTTTCG 60.039 55.000 10.06 0.00 35.68 3.46
340 362 2.433664 GCTGCTGCCACCATTTGC 60.434 61.111 3.85 0.00 0.00 3.68
353 375 6.153510 TGCCACCATTTGCATTAGTATTTGTA 59.846 34.615 0.00 0.00 31.31 2.41
354 376 7.147759 TGCCACCATTTGCATTAGTATTTGTAT 60.148 33.333 0.00 0.00 31.31 2.29
355 377 7.710475 GCCACCATTTGCATTAGTATTTGTATT 59.290 33.333 0.00 0.00 0.00 1.89
356 378 9.598517 CCACCATTTGCATTAGTATTTGTATTT 57.401 29.630 0.00 0.00 0.00 1.40
395 417 2.039613 AGAGAGACCAAGCCAAAAGGAG 59.960 50.000 0.00 0.00 0.00 3.69
403 425 3.612517 GCCAAAAGGAGGCCAAAAG 57.387 52.632 5.01 0.00 46.50 2.27
404 426 0.035317 GCCAAAAGGAGGCCAAAAGG 59.965 55.000 5.01 0.00 46.50 3.11
405 427 1.715785 CCAAAAGGAGGCCAAAAGGA 58.284 50.000 5.01 0.00 0.00 3.36
406 428 2.046292 CCAAAAGGAGGCCAAAAGGAA 58.954 47.619 5.01 0.00 0.00 3.36
407 429 2.037641 CCAAAAGGAGGCCAAAAGGAAG 59.962 50.000 5.01 0.00 0.00 3.46
408 430 2.015456 AAAGGAGGCCAAAAGGAAGG 57.985 50.000 5.01 0.00 0.00 3.46
409 431 1.158007 AAGGAGGCCAAAAGGAAGGA 58.842 50.000 5.01 0.00 0.00 3.36
410 432 1.158007 AGGAGGCCAAAAGGAAGGAA 58.842 50.000 5.01 0.00 0.00 3.36
411 433 1.076187 AGGAGGCCAAAAGGAAGGAAG 59.924 52.381 5.01 0.00 0.00 3.46
412 434 1.075536 GGAGGCCAAAAGGAAGGAAGA 59.924 52.381 5.01 0.00 0.00 2.87
450 472 0.892063 ACCAACACCAACACCAACAC 59.108 50.000 0.00 0.00 0.00 3.32
451 473 0.174617 CCAACACCAACACCAACACC 59.825 55.000 0.00 0.00 0.00 4.16
452 474 0.891373 CAACACCAACACCAACACCA 59.109 50.000 0.00 0.00 0.00 4.17
453 475 1.135141 CAACACCAACACCAACACCAG 60.135 52.381 0.00 0.00 0.00 4.00
454 476 1.319614 ACACCAACACCAACACCAGC 61.320 55.000 0.00 0.00 0.00 4.85
455 477 1.000270 ACCAACACCAACACCAGCA 60.000 52.632 0.00 0.00 0.00 4.41
456 478 1.037030 ACCAACACCAACACCAGCAG 61.037 55.000 0.00 0.00 0.00 4.24
457 479 1.066257 CAACACCAACACCAGCAGC 59.934 57.895 0.00 0.00 0.00 5.25
458 480 1.379710 AACACCAACACCAGCAGCA 60.380 52.632 0.00 0.00 0.00 4.41
459 481 1.386525 AACACCAACACCAGCAGCAG 61.387 55.000 0.00 0.00 0.00 4.24
473 495 2.751837 GCAGCCAGCAAGGGGTAC 60.752 66.667 0.00 0.00 44.79 3.34
474 496 2.756400 CAGCCAGCAAGGGGTACA 59.244 61.111 0.00 0.00 36.76 2.90
475 497 1.377725 CAGCCAGCAAGGGGTACAG 60.378 63.158 0.00 0.00 36.76 2.74
478 500 1.078143 CCAGCAAGGGGTACAGAGC 60.078 63.158 0.00 0.00 0.00 4.09
479 501 1.679311 CAGCAAGGGGTACAGAGCA 59.321 57.895 0.00 0.00 0.00 4.26
480 502 0.674895 CAGCAAGGGGTACAGAGCAC 60.675 60.000 0.00 0.00 0.00 4.40
518 540 3.584848 CCTTCCTCTTCTTCTTCCTCCAA 59.415 47.826 0.00 0.00 0.00 3.53
523 545 3.837731 CTCTTCTTCTTCCTCCAACTCCT 59.162 47.826 0.00 0.00 0.00 3.69
524 546 3.835395 TCTTCTTCTTCCTCCAACTCCTC 59.165 47.826 0.00 0.00 0.00 3.71
525 547 2.541466 TCTTCTTCCTCCAACTCCTCC 58.459 52.381 0.00 0.00 0.00 4.30
530 552 1.156322 TCCTCCAACTCCTCCCCTCT 61.156 60.000 0.00 0.00 0.00 3.69
532 554 0.689412 CTCCAACTCCTCCCCTCTCC 60.689 65.000 0.00 0.00 0.00 3.71
533 555 1.156322 TCCAACTCCTCCCCTCTCCT 61.156 60.000 0.00 0.00 0.00 3.69
547 569 0.612174 TCTCCTCTCCCCTTCACACG 60.612 60.000 0.00 0.00 0.00 4.49
555 577 2.542907 CCCTTCACACGCACACACC 61.543 63.158 0.00 0.00 0.00 4.16
556 578 1.817520 CCTTCACACGCACACACCA 60.818 57.895 0.00 0.00 0.00 4.17
557 579 1.643292 CTTCACACGCACACACCAG 59.357 57.895 0.00 0.00 0.00 4.00
559 581 3.952675 CACACGCACACACCAGCC 61.953 66.667 0.00 0.00 0.00 4.85
560 582 4.481617 ACACGCACACACCAGCCA 62.482 61.111 0.00 0.00 0.00 4.75
562 584 2.901840 ACGCACACACCAGCCAAG 60.902 61.111 0.00 0.00 0.00 3.61
590 628 1.067495 CCAGAGGACACGGAGAAGAAC 60.067 57.143 0.00 0.00 0.00 3.01
594 632 2.036089 GAGGACACGGAGAAGAACAAGT 59.964 50.000 0.00 0.00 0.00 3.16
595 633 2.036089 AGGACACGGAGAAGAACAAGTC 59.964 50.000 0.00 0.00 0.00 3.01
642 689 1.001293 CAGCCAGCCCTTTCCTTTTTC 59.999 52.381 0.00 0.00 0.00 2.29
643 690 1.133041 AGCCAGCCCTTTCCTTTTTCT 60.133 47.619 0.00 0.00 0.00 2.52
645 692 2.548707 GCCAGCCCTTTCCTTTTTCTTG 60.549 50.000 0.00 0.00 0.00 3.02
646 693 2.037641 CCAGCCCTTTCCTTTTTCTTGG 59.962 50.000 0.00 0.00 0.00 3.61
649 696 1.000843 CCCTTTCCTTTTTCTTGGCCG 59.999 52.381 0.00 0.00 0.00 6.13
650 697 1.000843 CCTTTCCTTTTTCTTGGCCGG 59.999 52.381 0.00 0.00 0.00 6.13
655 718 0.392706 CTTTTTCTTGGCCGGGCTTT 59.607 50.000 29.87 0.00 0.00 3.51
663 726 3.717294 GCCGGGCTTTGGAGGAGA 61.717 66.667 12.87 0.00 0.00 3.71
665 728 1.078143 CCGGGCTTTGGAGGAGAAG 60.078 63.158 0.00 0.00 0.00 2.85
670 733 2.040412 GGGCTTTGGAGGAGAAGAAGAA 59.960 50.000 0.00 0.00 0.00 2.52
671 734 3.342719 GGCTTTGGAGGAGAAGAAGAAG 58.657 50.000 0.00 0.00 0.00 2.85
672 735 3.008485 GGCTTTGGAGGAGAAGAAGAAGA 59.992 47.826 0.00 0.00 0.00 2.87
692 755 0.693049 TCAGGTCCTCTTTCTTGGCC 59.307 55.000 0.00 0.00 0.00 5.36
693 756 0.674895 CAGGTCCTCTTTCTTGGCCG 60.675 60.000 0.00 0.00 0.00 6.13
716 779 4.055178 GGCTGCCCCCAAATCAAT 57.945 55.556 7.66 0.00 0.00 2.57
717 780 3.222287 GGCTGCCCCCAAATCAATA 57.778 52.632 7.66 0.00 0.00 1.90
718 781 0.752658 GGCTGCCCCCAAATCAATAC 59.247 55.000 7.66 0.00 0.00 1.89
719 782 1.689258 GGCTGCCCCCAAATCAATACT 60.689 52.381 7.66 0.00 0.00 2.12
720 783 2.424234 GGCTGCCCCCAAATCAATACTA 60.424 50.000 7.66 0.00 0.00 1.82
721 784 2.623416 GCTGCCCCCAAATCAATACTAC 59.377 50.000 0.00 0.00 0.00 2.73
722 785 3.688414 GCTGCCCCCAAATCAATACTACT 60.688 47.826 0.00 0.00 0.00 2.57
723 786 4.536765 CTGCCCCCAAATCAATACTACTT 58.463 43.478 0.00 0.00 0.00 2.24
724 787 4.532834 TGCCCCCAAATCAATACTACTTC 58.467 43.478 0.00 0.00 0.00 3.01
725 788 3.889538 GCCCCCAAATCAATACTACTTCC 59.110 47.826 0.00 0.00 0.00 3.46
726 789 4.470602 CCCCCAAATCAATACTACTTCCC 58.529 47.826 0.00 0.00 0.00 3.97
727 790 4.079443 CCCCCAAATCAATACTACTTCCCA 60.079 45.833 0.00 0.00 0.00 4.37
728 791 5.133221 CCCCAAATCAATACTACTTCCCAG 58.867 45.833 0.00 0.00 0.00 4.45
729 792 5.104109 CCCCAAATCAATACTACTTCCCAGA 60.104 44.000 0.00 0.00 0.00 3.86
730 793 6.410853 CCCCAAATCAATACTACTTCCCAGAT 60.411 42.308 0.00 0.00 0.00 2.90
782 845 2.723322 TCCCATTGGATCTTCTGCTG 57.277 50.000 3.62 0.00 35.03 4.41
783 846 1.030457 CCCATTGGATCTTCTGCTGC 58.970 55.000 3.62 0.00 0.00 5.25
784 847 1.683938 CCCATTGGATCTTCTGCTGCA 60.684 52.381 3.62 0.88 0.00 4.41
786 849 2.089201 CATTGGATCTTCTGCTGCACA 58.911 47.619 0.00 0.00 0.00 4.57
787 850 2.275134 TTGGATCTTCTGCTGCACAA 57.725 45.000 0.00 0.00 0.00 3.33
788 851 2.275134 TGGATCTTCTGCTGCACAAA 57.725 45.000 0.00 0.00 0.00 2.83
790 853 1.200948 GGATCTTCTGCTGCACAAACC 59.799 52.381 0.00 0.00 0.00 3.27
793 856 0.236711 CTTCTGCTGCACAAACCTCG 59.763 55.000 0.00 0.00 0.00 4.63
794 857 1.785041 TTCTGCTGCACAAACCTCGC 61.785 55.000 0.00 0.00 0.00 5.03
795 858 3.584250 CTGCTGCACAAACCTCGCG 62.584 63.158 0.00 0.00 0.00 5.87
867 967 2.689983 CCCAATCCTGCAAATACCACTC 59.310 50.000 0.00 0.00 0.00 3.51
872 972 2.170607 TCCTGCAAATACCACTCTAGCC 59.829 50.000 0.00 0.00 0.00 3.93
878 978 1.236628 ATACCACTCTAGCCGTAGCG 58.763 55.000 0.00 0.00 46.67 4.26
879 979 1.442526 TACCACTCTAGCCGTAGCGC 61.443 60.000 0.00 0.00 46.67 5.92
881 981 2.439701 ACTCTAGCCGTAGCGCCA 60.440 61.111 2.29 0.00 46.67 5.69
882 982 2.026301 CTCTAGCCGTAGCGCCAC 59.974 66.667 2.29 0.00 46.67 5.01
883 983 3.486252 CTCTAGCCGTAGCGCCACC 62.486 68.421 2.29 0.00 46.67 4.61
884 984 3.833645 CTAGCCGTAGCGCCACCA 61.834 66.667 2.29 0.00 46.67 4.17
885 985 3.774959 CTAGCCGTAGCGCCACCAG 62.775 68.421 2.29 0.00 46.67 4.00
904 1004 2.106477 GCAGCAGCTTTTCTCTACCT 57.894 50.000 0.00 0.00 37.91 3.08
906 1006 3.600388 GCAGCAGCTTTTCTCTACCTAA 58.400 45.455 0.00 0.00 37.91 2.69
913 1013 3.868661 GCTTTTCTCTACCTAAGCTCTGC 59.131 47.826 0.00 0.00 39.79 4.26
916 1016 2.379972 TCTCTACCTAAGCTCTGCCAC 58.620 52.381 0.00 0.00 0.00 5.01
917 1017 1.410882 CTCTACCTAAGCTCTGCCACC 59.589 57.143 0.00 0.00 0.00 4.61
930 1034 0.544357 TGCCACCAGCCAGTACTACT 60.544 55.000 0.00 0.00 42.71 2.57
931 1035 0.175989 GCCACCAGCCAGTACTACTC 59.824 60.000 0.00 0.00 34.35 2.59
947 1051 1.051812 ACTCCTCCAGGACACACAAG 58.948 55.000 0.00 0.00 39.78 3.16
949 1053 0.105194 TCCTCCAGGACACACAAGGA 60.105 55.000 0.00 0.00 39.78 3.36
953 1058 0.250467 CCAGGACACACAAGGACAGG 60.250 60.000 0.00 0.00 0.00 4.00
1011 1116 3.151906 CCCCTAATGGCCTCCTCG 58.848 66.667 3.32 0.00 0.00 4.63
1012 1117 2.520536 CCCCTAATGGCCTCCTCGG 61.521 68.421 3.32 0.00 0.00 4.63
1013 1118 2.520536 CCCTAATGGCCTCCTCGGG 61.521 68.421 3.32 3.64 0.00 5.14
1192 1300 4.953868 TGGTCCACGCCAACGACG 62.954 66.667 0.00 0.00 43.93 5.12
1362 1470 3.151710 TCCTACACCCCCATCGCG 61.152 66.667 0.00 0.00 0.00 5.87
1420 1528 1.517832 GTCCTCCTCGTCACCATGG 59.482 63.158 11.19 11.19 0.00 3.66
1463 1571 2.256461 CCGCAAGCAGCAGGTTTC 59.744 61.111 0.00 0.00 46.13 2.78
1465 1573 0.955428 CCGCAAGCAGCAGGTTTCTA 60.955 55.000 0.00 0.00 46.13 2.10
1466 1574 1.089920 CGCAAGCAGCAGGTTTCTAT 58.910 50.000 0.00 0.00 46.13 1.98
1534 1658 9.012161 CATCTCCATTTTCTTCTTCTTCTTCTT 57.988 33.333 0.00 0.00 0.00 2.52
1536 1660 8.435982 TCTCCATTTTCTTCTTCTTCTTCTTCT 58.564 33.333 0.00 0.00 0.00 2.85
1557 1681 2.480100 TGCATCTGCGCTGCAATTA 58.520 47.368 19.10 0.00 46.06 1.40
1567 1692 5.972973 TCTGCGCTGCAATTATTTATTCAAG 59.027 36.000 9.73 0.00 38.41 3.02
1614 1760 7.868906 TTCAGCAATGACATCATTCAATCTA 57.131 32.000 4.08 0.00 44.10 1.98
1617 1763 7.012044 TCAGCAATGACATCATTCAATCTACTG 59.988 37.037 4.08 4.80 44.10 2.74
1714 1870 4.366684 GAGGCAGGGGTTGGTGGG 62.367 72.222 0.00 0.00 0.00 4.61
1749 1905 6.648192 CCACTCAGTCCTTCATTCTATTTCT 58.352 40.000 0.00 0.00 0.00 2.52
1753 1909 6.341316 TCAGTCCTTCATTCTATTTCTTCCG 58.659 40.000 0.00 0.00 0.00 4.30
1760 1916 8.202137 CCTTCATTCTATTTCTTCCGGTACTAA 58.798 37.037 0.00 0.00 0.00 2.24
1793 1951 4.742138 GCTTAGAGGAGATGTGGTCCAATC 60.742 50.000 0.00 0.00 36.43 2.67
1796 1954 1.561542 AGGAGATGTGGTCCAATCACC 59.438 52.381 16.00 16.00 36.43 4.02
1804 1962 3.448093 TGGTCCAATCACCATTAGCAA 57.552 42.857 0.00 0.00 41.84 3.91
1805 1963 3.088532 TGGTCCAATCACCATTAGCAAC 58.911 45.455 0.00 0.00 41.84 4.17
1806 1964 2.427095 GGTCCAATCACCATTAGCAACC 59.573 50.000 0.00 0.00 36.32 3.77
1807 1965 3.356290 GTCCAATCACCATTAGCAACCT 58.644 45.455 0.00 0.00 0.00 3.50
1808 1966 3.378427 GTCCAATCACCATTAGCAACCTC 59.622 47.826 0.00 0.00 0.00 3.85
1809 1967 3.010027 TCCAATCACCATTAGCAACCTCA 59.990 43.478 0.00 0.00 0.00 3.86
1810 1968 3.379372 CCAATCACCATTAGCAACCTCAG 59.621 47.826 0.00 0.00 0.00 3.35
1877 2065 6.761099 TTCTCCTGCTCTTGTTAGTAGTAG 57.239 41.667 0.00 0.00 0.00 2.57
1880 2068 6.822676 TCTCCTGCTCTTGTTAGTAGTAGTAC 59.177 42.308 0.00 0.00 0.00 2.73
1881 2069 5.884792 TCCTGCTCTTGTTAGTAGTAGTACC 59.115 44.000 4.02 0.00 0.00 3.34
1885 2074 7.544622 TGCTCTTGTTAGTAGTAGTACCAATG 58.455 38.462 4.02 0.97 0.00 2.82
1925 2125 5.406477 GTGGATGAATGTTTCTTTTCTTGGC 59.594 40.000 0.00 0.00 0.00 4.52
1926 2126 4.931601 GGATGAATGTTTCTTTTCTTGGCC 59.068 41.667 0.00 0.00 0.00 5.36
2192 2392 1.444553 CAGGACGACGACAGCTTCC 60.445 63.158 0.00 0.00 0.00 3.46
2203 2403 1.898574 CAGCTTCCGTGGCTTTGGT 60.899 57.895 0.00 0.00 38.03 3.67
2206 2406 3.254014 CTTCCGTGGCTTTGGTGCG 62.254 63.158 0.00 0.00 0.00 5.34
2245 2445 2.093447 CCCGAATGCAAACCTCTACTCT 60.093 50.000 0.00 0.00 0.00 3.24
2251 2451 5.948992 ATGCAAACCTCTACTCTTTTGTC 57.051 39.130 0.00 0.00 32.57 3.18
2254 2454 2.745515 ACCTCTACTCTTTTGTCGGC 57.254 50.000 0.00 0.00 0.00 5.54
2266 2466 5.245531 TCTTTTGTCGGCAACATAGAGATT 58.754 37.500 0.00 0.00 37.82 2.40
2344 2547 1.153628 GCTCCGCAACACCGAGTAT 60.154 57.895 0.00 0.00 0.00 2.12
2446 2649 4.716794 AGATTGAGAAGAAGATGGATGGC 58.283 43.478 0.00 0.00 0.00 4.40
2461 2664 0.393808 ATGGCGCCATTTACGTCCTT 60.394 50.000 36.10 11.49 33.26 3.36
2497 2700 0.179084 TCATTTCGGTCATCGGCTCC 60.179 55.000 0.00 0.00 39.77 4.70
2506 2709 1.153823 CATCGGCTCCGTCGTCTTT 60.154 57.895 8.28 0.00 40.74 2.52
2548 2751 0.703488 TGGTGGATGGCAGGATGAAA 59.297 50.000 0.00 0.00 39.69 2.69
2794 2997 1.000955 TCCAACTTGAACGAGGAGCTC 59.999 52.381 4.71 4.71 0.00 4.09
2809 3012 2.490217 CTCGGCCAGGTCTACACG 59.510 66.667 2.24 0.00 0.00 4.49
2812 3015 1.065928 CGGCCAGGTCTACACGATC 59.934 63.158 2.24 0.00 0.00 3.69
2913 3116 0.815734 GGAATCACCGAGGTCGAGAA 59.184 55.000 0.00 0.00 43.02 2.87
2917 3120 1.446272 CACCGAGGTCGAGAAAGCC 60.446 63.158 0.00 0.00 43.02 4.35
3067 3270 0.661020 GGGTTCACCAACAACACTCG 59.339 55.000 0.00 0.00 39.85 4.18
3136 3339 2.178521 CCGGAGGTCGACGAAGTG 59.821 66.667 9.92 0.00 44.30 3.16
3265 3468 0.548031 TGCATGAGTTGGATCCCTCC 59.452 55.000 9.90 0.00 42.45 4.30
3295 3498 8.421784 GGAGAACAAGTTGACAGGTATATATGA 58.578 37.037 10.54 0.00 0.00 2.15
3306 3509 9.817809 TGACAGGTATATATGAGTTTCAACTTC 57.182 33.333 0.00 0.00 39.88 3.01
3307 3510 9.817809 GACAGGTATATATGAGTTTCAACTTCA 57.182 33.333 0.00 0.00 39.88 3.02
3323 3526 8.742554 TTCAACTTCAGTCAGTTTTTCTTTTC 57.257 30.769 0.00 0.00 34.60 2.29
3359 3573 3.955650 TCAGGAGCTGTAACACTAACC 57.044 47.619 0.00 0.00 32.61 2.85
3367 3581 3.244457 GCTGTAACACTAACCTCAACCCT 60.244 47.826 0.00 0.00 0.00 4.34
3368 3582 4.020839 GCTGTAACACTAACCTCAACCCTA 60.021 45.833 0.00 0.00 0.00 3.53
3369 3583 5.473066 TGTAACACTAACCTCAACCCTAC 57.527 43.478 0.00 0.00 0.00 3.18
3370 3584 4.284234 TGTAACACTAACCTCAACCCTACC 59.716 45.833 0.00 0.00 0.00 3.18
3631 3874 3.005897 GGCTGTCAAACTCTGAGAGTACA 59.994 47.826 16.52 15.08 45.28 2.90
3635 3878 7.201830 GGCTGTCAAACTCTGAGAGTACATATA 60.202 40.741 16.52 0.82 45.28 0.86
3670 3913 5.207768 CAGAAGCACATAAATGATTACGCC 58.792 41.667 0.00 0.00 0.00 5.68
3790 4033 1.003262 GCGCTGATCGAGATGAGCTC 61.003 60.000 19.18 6.82 44.25 4.09
3879 4122 1.826385 CTGCAAAAGGGGGTGAGTAG 58.174 55.000 0.00 0.00 0.00 2.57
3918 4165 4.976116 GTGCTGTAAAATGGAACAGTTCAC 59.024 41.667 15.36 4.16 46.54 3.18
3919 4166 4.037446 TGCTGTAAAATGGAACAGTTCACC 59.963 41.667 15.36 0.00 46.54 4.02
4023 4280 0.691078 AGATATGGGTGCTGACGGGT 60.691 55.000 0.00 0.00 0.00 5.28
4151 4419 3.333804 TGCTCGTTTTCACAGATATGCA 58.666 40.909 0.00 0.00 0.00 3.96
4273 4542 8.622948 AATAAGGTAGATAAAGTATTGCTGCC 57.377 34.615 0.00 0.00 31.68 4.85
4274 4543 5.896073 AGGTAGATAAAGTATTGCTGCCT 57.104 39.130 0.00 0.00 34.73 4.75
4275 4544 5.615289 AGGTAGATAAAGTATTGCTGCCTG 58.385 41.667 0.00 0.00 36.63 4.85
4285 4554 8.525290 AAAGTATTGCTGCCTGATTATAGTTT 57.475 30.769 0.00 0.00 0.00 2.66
4309 4588 7.507733 TCTTATAGTAGACGGACCAATTCTC 57.492 40.000 0.00 0.00 0.00 2.87
4310 4589 6.489361 TCTTATAGTAGACGGACCAATTCTCC 59.511 42.308 0.00 0.00 0.00 3.71
4311 4590 2.816411 AGTAGACGGACCAATTCTCCA 58.184 47.619 0.00 0.00 0.00 3.86
4312 4591 3.375699 AGTAGACGGACCAATTCTCCAT 58.624 45.455 0.00 0.00 0.00 3.41
4313 4592 4.543689 AGTAGACGGACCAATTCTCCATA 58.456 43.478 0.00 0.00 0.00 2.74
4328 4607 5.808366 TCTCCATAATAACGAGCTCCATT 57.192 39.130 8.47 7.99 0.00 3.16
4333 4612 6.038161 TCCATAATAACGAGCTCCATTTTGTG 59.962 38.462 8.47 7.14 0.00 3.33
4334 4613 3.764885 ATAACGAGCTCCATTTTGTGC 57.235 42.857 8.47 0.00 0.00 4.57
4335 4614 1.317613 AACGAGCTCCATTTTGTGCA 58.682 45.000 8.47 0.00 0.00 4.57
4338 4617 3.081061 ACGAGCTCCATTTTGTGCATAA 58.919 40.909 8.47 0.00 0.00 1.90
4339 4618 3.119849 ACGAGCTCCATTTTGTGCATAAC 60.120 43.478 8.47 0.00 0.00 1.89
4340 4619 3.127548 CGAGCTCCATTTTGTGCATAACT 59.872 43.478 8.47 0.00 0.00 2.24
4341 4620 4.418392 GAGCTCCATTTTGTGCATAACTG 58.582 43.478 0.87 0.00 0.00 3.16
4355 4634 5.646467 GCATAACTGCCTGCATATTTTTG 57.354 39.130 0.00 0.00 42.88 2.44
4356 4635 5.111293 GCATAACTGCCTGCATATTTTTGT 58.889 37.500 0.00 0.00 42.88 2.83
4357 4636 5.581874 GCATAACTGCCTGCATATTTTTGTT 59.418 36.000 0.00 0.00 42.88 2.83
4358 4637 6.455913 GCATAACTGCCTGCATATTTTTGTTG 60.456 38.462 0.00 0.00 42.88 3.33
4359 4638 4.605640 ACTGCCTGCATATTTTTGTTGT 57.394 36.364 0.00 0.00 0.00 3.32
4360 4639 4.959723 ACTGCCTGCATATTTTTGTTGTT 58.040 34.783 0.00 0.00 0.00 2.83
4361 4640 4.751098 ACTGCCTGCATATTTTTGTTGTTG 59.249 37.500 0.00 0.00 0.00 3.33
4362 4641 4.953667 TGCCTGCATATTTTTGTTGTTGA 58.046 34.783 0.00 0.00 0.00 3.18
4363 4642 5.363101 TGCCTGCATATTTTTGTTGTTGAA 58.637 33.333 0.00 0.00 0.00 2.69
4364 4643 5.236047 TGCCTGCATATTTTTGTTGTTGAAC 59.764 36.000 0.00 0.00 0.00 3.18
4365 4644 5.466393 GCCTGCATATTTTTGTTGTTGAACT 59.534 36.000 0.00 0.00 32.79 3.01
4366 4645 6.564499 GCCTGCATATTTTTGTTGTTGAACTG 60.564 38.462 0.00 0.00 32.79 3.16
4407 4692 1.856802 ACACCGGTCTGTTTTACGAC 58.143 50.000 2.59 0.00 0.00 4.34
4453 4746 2.775032 TACGGCAGGCGTCAAAGGTC 62.775 60.000 27.24 0.00 0.00 3.85
4673 4969 7.765695 AGCTCAAATTTCACCTCAGAATTAA 57.234 32.000 0.00 0.00 0.00 1.40
4778 5080 1.789751 GGCACCGGTAAAGTTACGC 59.210 57.895 6.87 3.21 34.50 4.42
4801 5103 0.101040 CAATTGGCGATGGTGCGAAT 59.899 50.000 0.00 0.00 43.81 3.34
4837 5139 0.104934 AGGAGGCAGATATCGGGGTT 60.105 55.000 4.98 0.00 0.00 4.11
4979 5281 6.228995 TCATCAATGGTAAGCAATGCAAAAA 58.771 32.000 8.35 0.00 0.00 1.94
5072 5378 1.676006 AGCGTCTCCCTTGTTTTTGTG 59.324 47.619 0.00 0.00 0.00 3.33
5099 5411 6.382859 TGGATCAACAGGTATGCTACTTCTTA 59.617 38.462 0.00 0.00 0.00 2.10
5156 5468 2.814280 ACGAGTCCTTGTCGACATTT 57.186 45.000 20.80 3.29 39.92 2.32
5201 5513 1.067142 TGGTCCATGTCGCTCTACAAC 60.067 52.381 0.00 0.00 32.02 3.32
5285 5597 1.905637 TCTGTCTCAAGGTACGCTCA 58.094 50.000 0.00 0.00 0.00 4.26
5290 5602 0.450583 CTCAAGGTACGCTCACGCTA 59.549 55.000 0.00 0.00 45.53 4.26
5291 5603 0.169672 TCAAGGTACGCTCACGCTAC 59.830 55.000 0.00 0.00 45.53 3.58
5292 5604 0.109458 CAAGGTACGCTCACGCTACA 60.109 55.000 0.00 0.00 45.53 2.74
5293 5605 0.815734 AAGGTACGCTCACGCTACAT 59.184 50.000 0.00 0.00 45.53 2.29
5294 5606 0.381089 AGGTACGCTCACGCTACATC 59.619 55.000 0.00 0.00 45.53 3.06
5295 5607 0.928908 GGTACGCTCACGCTACATCG 60.929 60.000 0.00 0.00 45.53 3.84
5297 5609 1.371337 TACGCTCACGCTACATCGGT 61.371 55.000 0.00 0.00 45.53 4.69
5298 5610 1.939785 CGCTCACGCTACATCGGTC 60.940 63.158 0.00 0.00 0.00 4.79
5300 5612 0.867753 GCTCACGCTACATCGGTCTG 60.868 60.000 0.00 0.00 0.00 3.51
5301 5613 0.733150 CTCACGCTACATCGGTCTGA 59.267 55.000 0.00 0.00 0.00 3.27
5302 5614 1.132453 CTCACGCTACATCGGTCTGAA 59.868 52.381 0.00 0.00 0.00 3.02
5305 5617 2.025155 ACGCTACATCGGTCTGAAGAT 58.975 47.619 0.00 0.00 0.00 2.40
5306 5618 2.427453 ACGCTACATCGGTCTGAAGATT 59.573 45.455 0.00 0.00 0.00 2.40
5352 5666 8.593492 AAAAAGAAAATGGAATTGCTCACTAC 57.407 30.769 0.00 0.00 36.10 2.73
5363 5677 6.823689 GGAATTGCTCACTACTTCTGGAAATA 59.176 38.462 0.00 0.00 0.00 1.40
5482 5801 3.118992 CCGTGATCATCTTCTTCCTCACA 60.119 47.826 0.00 0.00 34.17 3.58
5503 5822 3.782244 GCGTCGCTCAAGCACCAG 61.782 66.667 10.68 0.00 42.21 4.00
5672 5991 7.414319 GCATCTTCCTATGGTACGTACTATCTC 60.414 44.444 25.51 9.60 0.00 2.75
5675 5994 6.931790 TCCTATGGTACGTACTATCTCTCT 57.068 41.667 25.51 6.83 0.00 3.10
5676 5995 8.427902 TTCCTATGGTACGTACTATCTCTCTA 57.572 38.462 25.51 8.53 0.00 2.43
5677 5996 8.606754 TCCTATGGTACGTACTATCTCTCTAT 57.393 38.462 25.51 5.43 0.00 1.98
5678 5997 8.694540 TCCTATGGTACGTACTATCTCTCTATC 58.305 40.741 25.51 5.66 0.00 2.08
5679 5998 8.698210 CCTATGGTACGTACTATCTCTCTATCT 58.302 40.741 25.51 4.05 0.00 1.98
5706 6025 6.294363 CGACGACAACTAAAATTAACCAGAC 58.706 40.000 0.00 0.00 0.00 3.51
5720 6039 2.958818 ACCAGACCAACTCACTCACTA 58.041 47.619 0.00 0.00 0.00 2.74
5741 6069 7.338196 TCACTATTTTTCTGACCAAACTGACAA 59.662 33.333 0.00 0.00 0.00 3.18
5753 6081 5.531287 ACCAAACTGACAATACCACTCTTTC 59.469 40.000 0.00 0.00 0.00 2.62
5917 6247 1.765314 CTCATCCCCTACTTCACCCTG 59.235 57.143 0.00 0.00 0.00 4.45
6102 6432 2.906897 CCGCACCAACAGCAAGGT 60.907 61.111 0.00 0.00 39.10 3.50
6104 6434 2.186160 CGCACCAACAGCAAGGTCA 61.186 57.895 0.00 0.00 35.52 4.02
6110 6440 0.518636 CAACAGCAAGGTCATCCACG 59.481 55.000 0.00 0.00 35.89 4.94
6111 6441 1.237285 AACAGCAAGGTCATCCACGC 61.237 55.000 0.00 0.00 35.89 5.34
6121 6454 1.946156 CATCCACGCGGACTCATCG 60.946 63.158 12.47 0.00 46.79 3.84
6124 6457 2.944557 CACGCGGACTCATCGTCG 60.945 66.667 12.47 0.00 43.79 5.12
6312 6658 2.169352 CCTGGTCAGGTGTTAGAGATGG 59.831 54.545 8.78 0.00 43.61 3.51
6323 6669 0.974010 TAGAGATGGGCGGGTTTCGT 60.974 55.000 0.00 0.00 41.72 3.85
6372 6731 9.071276 ACATGATGAGATTTTGTTTGTAGAACT 57.929 29.630 0.00 0.00 0.00 3.01
6396 6755 1.000396 CTGCAAAAGGGAGGGAGGG 60.000 63.158 0.00 0.00 0.00 4.30
6398 6757 1.304617 GCAAAAGGGAGGGAGGGAG 59.695 63.158 0.00 0.00 0.00 4.30
6402 6761 2.201734 AAAGGGAGGGAGGGAGGGAG 62.202 65.000 0.00 0.00 0.00 4.30
6773 7162 4.348656 CTGTCATTGAAAGAATGGATGCG 58.651 43.478 0.00 0.00 0.00 4.73
6848 7266 7.833285 TTACTTAGCAAGTGGGAAAAGAATT 57.167 32.000 10.59 0.00 42.84 2.17
6886 7396 3.134458 CCCTGATTTCAGCCGAACTATC 58.866 50.000 1.90 0.00 42.47 2.08
6887 7397 3.181461 CCCTGATTTCAGCCGAACTATCT 60.181 47.826 1.90 0.00 42.47 1.98
6888 7398 4.446371 CCTGATTTCAGCCGAACTATCTT 58.554 43.478 1.90 0.00 42.47 2.40
6889 7399 4.878397 CCTGATTTCAGCCGAACTATCTTT 59.122 41.667 1.90 0.00 42.47 2.52
6890 7400 6.049149 CCTGATTTCAGCCGAACTATCTTTA 58.951 40.000 1.90 0.00 42.47 1.85
6891 7401 6.018669 CCTGATTTCAGCCGAACTATCTTTAC 60.019 42.308 1.90 0.00 42.47 2.01
6892 7402 5.815740 TGATTTCAGCCGAACTATCTTTACC 59.184 40.000 0.00 0.00 0.00 2.85
6893 7403 3.814005 TCAGCCGAACTATCTTTACCC 57.186 47.619 0.00 0.00 0.00 3.69
6908 7544 9.462606 CTATCTTTACCCTTTGAAATACAACCT 57.537 33.333 0.00 0.00 38.29 3.50
6909 7545 8.721133 ATCTTTACCCTTTGAAATACAACCTT 57.279 30.769 0.00 0.00 38.29 3.50
6913 7549 9.602568 TTTACCCTTTGAAATACAACCTTTTTC 57.397 29.630 0.00 0.00 38.29 2.29
6914 7550 6.588204 ACCCTTTGAAATACAACCTTTTTCC 58.412 36.000 0.00 0.00 38.29 3.13
6988 7624 9.675464 TTTACAAAGATACGGGTATGAATTTCT 57.325 29.630 0.00 0.00 0.00 2.52
6989 7625 7.553881 ACAAAGATACGGGTATGAATTTCTG 57.446 36.000 0.00 0.00 0.00 3.02
6990 7626 6.542370 ACAAAGATACGGGTATGAATTTCTGG 59.458 38.462 0.00 0.00 0.00 3.86
7001 7637 6.881602 GGTATGAATTTCTGGGTATGAGATCC 59.118 42.308 0.00 0.00 0.00 3.36
7122 7762 2.356382 GGAGATGACTGGTCGACTGTAG 59.644 54.545 16.46 13.51 0.00 2.74
7123 7763 3.271729 GAGATGACTGGTCGACTGTAGA 58.728 50.000 16.46 5.84 0.00 2.59
7141 7781 6.554982 ACTGTAGATAGATGGCCTAACATTGA 59.445 38.462 3.32 0.00 0.00 2.57
7145 7785 3.287867 AGATGGCCTAACATTGACAGG 57.712 47.619 3.32 0.00 0.00 4.00
7149 7789 1.745653 GGCCTAACATTGACAGGAAGC 59.254 52.381 0.00 0.00 0.00 3.86
7150 7790 2.436417 GCCTAACATTGACAGGAAGCA 58.564 47.619 11.05 0.00 0.00 3.91
7151 7791 3.019564 GCCTAACATTGACAGGAAGCAT 58.980 45.455 11.05 0.00 0.00 3.79
7152 7792 3.445096 GCCTAACATTGACAGGAAGCATT 59.555 43.478 11.05 0.00 0.00 3.56
7153 7793 4.439289 GCCTAACATTGACAGGAAGCATTC 60.439 45.833 11.05 0.00 46.67 2.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 9.543231 TCCTCTTCCTTATTAGAACTCTTTACA 57.457 33.333 0.00 0.00 0.00 2.41
10 11 9.203163 CCTCCTCTTCCTTATTAGAACTCTTTA 57.797 37.037 0.00 0.00 0.00 1.85
11 12 7.901861 TCCTCCTCTTCCTTATTAGAACTCTTT 59.098 37.037 0.00 0.00 0.00 2.52
12 13 7.423341 TCCTCCTCTTCCTTATTAGAACTCTT 58.577 38.462 0.00 0.00 0.00 2.85
13 14 6.987557 TCCTCCTCTTCCTTATTAGAACTCT 58.012 40.000 0.00 0.00 0.00 3.24
14 15 7.663043 TTCCTCCTCTTCCTTATTAGAACTC 57.337 40.000 0.00 0.00 0.00 3.01
15 16 6.099125 GCTTCCTCCTCTTCCTTATTAGAACT 59.901 42.308 0.00 0.00 0.00 3.01
16 17 6.099125 AGCTTCCTCCTCTTCCTTATTAGAAC 59.901 42.308 0.00 0.00 0.00 3.01
17 18 6.206042 AGCTTCCTCCTCTTCCTTATTAGAA 58.794 40.000 0.00 0.00 0.00 2.10
18 19 5.782925 AGCTTCCTCCTCTTCCTTATTAGA 58.217 41.667 0.00 0.00 0.00 2.10
19 20 6.326323 AGAAGCTTCCTCCTCTTCCTTATTAG 59.674 42.308 22.81 0.00 37.51 1.73
20 21 6.206042 AGAAGCTTCCTCCTCTTCCTTATTA 58.794 40.000 22.81 0.00 37.51 0.98
21 22 5.036236 AGAAGCTTCCTCCTCTTCCTTATT 58.964 41.667 22.81 0.00 37.51 1.40
22 23 4.630177 AGAAGCTTCCTCCTCTTCCTTAT 58.370 43.478 22.81 0.00 37.51 1.73
23 24 4.067944 AGAAGCTTCCTCCTCTTCCTTA 57.932 45.455 22.81 0.00 37.51 2.69
24 25 2.914536 AGAAGCTTCCTCCTCTTCCTT 58.085 47.619 22.81 0.00 37.51 3.36
25 26 2.640284 AGAAGCTTCCTCCTCTTCCT 57.360 50.000 22.81 0.00 37.51 3.36
26 27 4.223144 AGATAGAAGCTTCCTCCTCTTCC 58.777 47.826 22.81 2.80 37.51 3.46
27 28 6.068670 ACTAGATAGAAGCTTCCTCCTCTTC 58.931 44.000 22.81 9.24 37.17 2.87
28 29 6.025793 ACTAGATAGAAGCTTCCTCCTCTT 57.974 41.667 22.81 5.11 0.00 2.85
29 30 5.663158 ACTAGATAGAAGCTTCCTCCTCT 57.337 43.478 22.81 19.17 0.00 3.69
30 31 6.540083 ACTACTAGATAGAAGCTTCCTCCTC 58.460 44.000 22.81 13.61 34.65 3.71
31 32 6.524545 ACTACTAGATAGAAGCTTCCTCCT 57.475 41.667 22.81 17.63 34.65 3.69
32 33 7.455891 AGTACTACTAGATAGAAGCTTCCTCC 58.544 42.308 22.81 11.57 34.65 4.30
33 34 7.605309 GGAGTACTACTAGATAGAAGCTTCCTC 59.395 44.444 22.81 18.64 34.65 3.71
34 35 7.294008 AGGAGTACTACTAGATAGAAGCTTCCT 59.706 40.741 22.81 14.89 34.65 3.36
35 36 7.455891 AGGAGTACTACTAGATAGAAGCTTCC 58.544 42.308 22.81 7.94 34.65 3.46
45 46 9.245481 GCATGGTAATTAGGAGTACTACTAGAT 57.755 37.037 14.54 10.24 0.00 1.98
46 47 8.222637 TGCATGGTAATTAGGAGTACTACTAGA 58.777 37.037 14.54 7.11 0.00 2.43
47 48 8.405418 TGCATGGTAATTAGGAGTACTACTAG 57.595 38.462 14.54 2.59 0.00 2.57
48 49 8.771521 TTGCATGGTAATTAGGAGTACTACTA 57.228 34.615 11.03 11.03 0.00 1.82
49 50 7.670605 TTGCATGGTAATTAGGAGTACTACT 57.329 36.000 13.42 13.42 0.00 2.57
50 51 8.726870 TTTTGCATGGTAATTAGGAGTACTAC 57.273 34.615 0.00 0.00 0.00 2.73
86 87 8.841300 GTGAACAAGAAGAAGAAAATTAGGACT 58.159 33.333 0.00 0.00 0.00 3.85
87 88 8.621286 TGTGAACAAGAAGAAGAAAATTAGGAC 58.379 33.333 0.00 0.00 0.00 3.85
88 89 8.621286 GTGTGAACAAGAAGAAGAAAATTAGGA 58.379 33.333 0.00 0.00 0.00 2.94
89 90 8.624776 AGTGTGAACAAGAAGAAGAAAATTAGG 58.375 33.333 0.00 0.00 0.00 2.69
128 129 6.518493 TGGAAATTCGTGACAAACTAGTAGT 58.482 36.000 0.00 0.00 0.00 2.73
130 131 6.128391 GCATGGAAATTCGTGACAAACTAGTA 60.128 38.462 0.00 0.00 0.00 1.82
139 140 1.468054 GCCTGCATGGAAATTCGTGAC 60.468 52.381 6.40 0.00 38.35 3.67
144 145 0.903942 TTGGGCCTGCATGGAAATTC 59.096 50.000 4.53 0.00 38.35 2.17
175 176 1.005805 TCCATCTCATTTGGTGGTGGG 59.994 52.381 0.00 0.00 35.64 4.61
179 180 2.380941 TGCATCCATCTCATTTGGTGG 58.619 47.619 0.00 0.00 35.64 4.61
185 189 6.724893 TTTCATTCATGCATCCATCTCATT 57.275 33.333 0.00 0.00 0.00 2.57
194 198 5.927689 TGGTTGACTTTTTCATTCATGCATC 59.072 36.000 0.00 0.00 32.84 3.91
198 202 6.146510 CACCATGGTTGACTTTTTCATTCATG 59.853 38.462 16.84 0.00 40.78 3.07
202 206 5.363580 AGTCACCATGGTTGACTTTTTCATT 59.636 36.000 29.29 15.00 39.59 2.57
207 211 3.885297 CTCAGTCACCATGGTTGACTTTT 59.115 43.478 31.00 17.94 40.50 2.27
222 226 1.000163 GAAAGAGACGCCACTCAGTCA 60.000 52.381 7.40 0.00 39.67 3.41
223 227 1.704070 GAAAGAGACGCCACTCAGTC 58.296 55.000 7.40 0.00 39.14 3.51
224 228 0.039074 CGAAAGAGACGCCACTCAGT 60.039 55.000 7.40 0.00 39.14 3.41
225 229 0.039074 ACGAAAGAGACGCCACTCAG 60.039 55.000 7.40 0.16 39.14 3.35
226 230 0.318699 CACGAAAGAGACGCCACTCA 60.319 55.000 7.40 0.00 39.14 3.41
299 320 6.018832 GCTGCTGATTTGATTCTCTTCTCTAC 60.019 42.308 0.00 0.00 0.00 2.59
302 323 4.877251 AGCTGCTGATTTGATTCTCTTCTC 59.123 41.667 0.00 0.00 0.00 2.87
303 324 4.636648 CAGCTGCTGATTTGATTCTCTTCT 59.363 41.667 24.88 0.00 32.44 2.85
304 325 4.731193 GCAGCTGCTGATTTGATTCTCTTC 60.731 45.833 32.30 6.13 38.21 2.87
305 326 3.128938 GCAGCTGCTGATTTGATTCTCTT 59.871 43.478 32.30 0.00 38.21 2.85
356 378 9.871238 GGTCTCTCTCTAACAAATACAAATACA 57.129 33.333 0.00 0.00 0.00 2.29
357 379 9.871238 TGGTCTCTCTCTAACAAATACAAATAC 57.129 33.333 0.00 0.00 0.00 1.89
359 381 9.442047 CTTGGTCTCTCTCTAACAAATACAAAT 57.558 33.333 0.00 0.00 0.00 2.32
360 382 7.387948 GCTTGGTCTCTCTCTAACAAATACAAA 59.612 37.037 0.00 0.00 0.00 2.83
361 383 6.874134 GCTTGGTCTCTCTCTAACAAATACAA 59.126 38.462 0.00 0.00 0.00 2.41
362 384 6.398918 GCTTGGTCTCTCTCTAACAAATACA 58.601 40.000 0.00 0.00 0.00 2.29
363 385 5.813157 GGCTTGGTCTCTCTCTAACAAATAC 59.187 44.000 0.00 0.00 0.00 1.89
364 386 5.483937 TGGCTTGGTCTCTCTCTAACAAATA 59.516 40.000 0.00 0.00 0.00 1.40
365 387 4.287067 TGGCTTGGTCTCTCTCTAACAAAT 59.713 41.667 0.00 0.00 0.00 2.32
366 388 3.646162 TGGCTTGGTCTCTCTCTAACAAA 59.354 43.478 0.00 0.00 0.00 2.83
367 389 3.239449 TGGCTTGGTCTCTCTCTAACAA 58.761 45.455 0.00 0.00 0.00 2.83
368 390 2.889512 TGGCTTGGTCTCTCTCTAACA 58.110 47.619 0.00 0.00 0.00 2.41
369 391 3.963428 TTGGCTTGGTCTCTCTCTAAC 57.037 47.619 0.00 0.00 0.00 2.34
370 392 4.263068 CCTTTTGGCTTGGTCTCTCTCTAA 60.263 45.833 0.00 0.00 0.00 2.10
371 393 3.261897 CCTTTTGGCTTGGTCTCTCTCTA 59.738 47.826 0.00 0.00 0.00 2.43
372 394 2.039613 CCTTTTGGCTTGGTCTCTCTCT 59.960 50.000 0.00 0.00 0.00 3.10
373 395 2.039084 TCCTTTTGGCTTGGTCTCTCTC 59.961 50.000 0.00 0.00 40.12 3.20
374 396 2.039613 CTCCTTTTGGCTTGGTCTCTCT 59.960 50.000 0.00 0.00 40.12 3.10
375 397 2.431454 CTCCTTTTGGCTTGGTCTCTC 58.569 52.381 0.00 0.00 40.12 3.20
395 417 1.995376 TGTCTTCCTTCCTTTTGGCC 58.005 50.000 0.00 0.00 40.12 5.36
397 419 2.297315 GGCTTGTCTTCCTTCCTTTTGG 59.703 50.000 0.00 0.00 42.21 3.28
398 420 2.297315 GGGCTTGTCTTCCTTCCTTTTG 59.703 50.000 0.00 0.00 0.00 2.44
399 421 2.091333 TGGGCTTGTCTTCCTTCCTTTT 60.091 45.455 0.00 0.00 0.00 2.27
400 422 1.499007 TGGGCTTGTCTTCCTTCCTTT 59.501 47.619 0.00 0.00 0.00 3.11
401 423 1.149101 TGGGCTTGTCTTCCTTCCTT 58.851 50.000 0.00 0.00 0.00 3.36
402 424 0.402121 GTGGGCTTGTCTTCCTTCCT 59.598 55.000 0.00 0.00 0.00 3.36
403 425 0.609406 GGTGGGCTTGTCTTCCTTCC 60.609 60.000 0.00 0.00 0.00 3.46
404 426 0.110486 TGGTGGGCTTGTCTTCCTTC 59.890 55.000 0.00 0.00 0.00 3.46
405 427 0.178990 GTGGTGGGCTTGTCTTCCTT 60.179 55.000 0.00 0.00 0.00 3.36
406 428 1.456287 GTGGTGGGCTTGTCTTCCT 59.544 57.895 0.00 0.00 0.00 3.36
407 429 1.603739 GGTGGTGGGCTTGTCTTCC 60.604 63.158 0.00 0.00 0.00 3.46
408 430 1.150536 TGGTGGTGGGCTTGTCTTC 59.849 57.895 0.00 0.00 0.00 2.87
409 431 1.152756 GTGGTGGTGGGCTTGTCTT 60.153 57.895 0.00 0.00 0.00 3.01
410 432 2.515901 GTGGTGGTGGGCTTGTCT 59.484 61.111 0.00 0.00 0.00 3.41
411 433 2.597510 GGTGGTGGTGGGCTTGTC 60.598 66.667 0.00 0.00 0.00 3.18
412 434 3.425014 TGGTGGTGGTGGGCTTGT 61.425 61.111 0.00 0.00 0.00 3.16
450 472 3.749064 CTTGCTGGCTGCTGCTGG 61.749 66.667 17.45 9.34 43.37 4.85
451 473 3.749064 CCTTGCTGGCTGCTGCTG 61.749 66.667 17.45 9.71 43.37 4.41
454 476 3.272364 TACCCCTTGCTGGCTGCTG 62.272 63.158 17.45 9.89 43.37 4.41
455 477 2.935481 TACCCCTTGCTGGCTGCT 60.935 61.111 17.45 0.00 43.37 4.24
456 478 2.751837 GTACCCCTTGCTGGCTGC 60.752 66.667 9.67 9.67 43.25 5.25
457 479 1.377725 CTGTACCCCTTGCTGGCTG 60.378 63.158 0.00 0.00 0.00 4.85
458 480 1.538876 TCTGTACCCCTTGCTGGCT 60.539 57.895 0.00 0.00 0.00 4.75
459 481 1.078143 CTCTGTACCCCTTGCTGGC 60.078 63.158 0.00 0.00 0.00 4.85
471 493 2.289072 GGAGAAAGTGCTGTGCTCTGTA 60.289 50.000 0.00 0.00 32.56 2.74
472 494 1.542108 GGAGAAAGTGCTGTGCTCTGT 60.542 52.381 0.00 0.00 32.56 3.41
473 495 1.155042 GGAGAAAGTGCTGTGCTCTG 58.845 55.000 0.00 0.00 32.56 3.35
474 496 1.001860 GAGGAGAAAGTGCTGTGCTCT 59.998 52.381 0.00 0.00 33.65 4.09
475 497 1.001860 AGAGGAGAAAGTGCTGTGCTC 59.998 52.381 0.00 0.00 0.00 4.26
478 500 1.622811 AGGAGAGGAGAAAGTGCTGTG 59.377 52.381 0.00 0.00 0.00 3.66
479 501 2.022718 AGGAGAGGAGAAAGTGCTGT 57.977 50.000 0.00 0.00 0.00 4.40
480 502 2.354604 GGAAGGAGAGGAGAAAGTGCTG 60.355 54.545 0.00 0.00 0.00 4.41
518 540 1.293683 GGAGAGGAGAGGGGAGGAGT 61.294 65.000 0.00 0.00 0.00 3.85
523 545 1.550374 AAGGGGAGAGGAGAGGGGA 60.550 63.158 0.00 0.00 0.00 4.81
524 546 1.074850 GAAGGGGAGAGGAGAGGGG 60.075 68.421 0.00 0.00 0.00 4.79
525 547 0.689412 GTGAAGGGGAGAGGAGAGGG 60.689 65.000 0.00 0.00 0.00 4.30
530 552 2.283529 GCGTGTGAAGGGGAGAGGA 61.284 63.158 0.00 0.00 0.00 3.71
532 554 1.374758 GTGCGTGTGAAGGGGAGAG 60.375 63.158 0.00 0.00 0.00 3.20
533 555 2.137528 TGTGCGTGTGAAGGGGAGA 61.138 57.895 0.00 0.00 0.00 3.71
547 569 1.383456 TTGTCTTGGCTGGTGTGTGC 61.383 55.000 0.00 0.00 0.00 4.57
555 577 2.149578 CTCTGGTCTTTGTCTTGGCTG 58.850 52.381 0.00 0.00 0.00 4.85
556 578 1.072965 CCTCTGGTCTTTGTCTTGGCT 59.927 52.381 0.00 0.00 0.00 4.75
557 579 1.072331 TCCTCTGGTCTTTGTCTTGGC 59.928 52.381 0.00 0.00 0.00 4.52
559 581 3.134458 GTGTCCTCTGGTCTTTGTCTTG 58.866 50.000 0.00 0.00 0.00 3.02
560 582 2.224066 CGTGTCCTCTGGTCTTTGTCTT 60.224 50.000 0.00 0.00 0.00 3.01
562 584 1.605712 CCGTGTCCTCTGGTCTTTGTC 60.606 57.143 0.00 0.00 0.00 3.18
642 689 3.064324 CTCCAAAGCCCGGCCAAG 61.064 66.667 5.55 0.00 0.00 3.61
643 690 4.676951 CCTCCAAAGCCCGGCCAA 62.677 66.667 5.55 0.00 0.00 4.52
645 692 4.803908 CTCCTCCAAAGCCCGGCC 62.804 72.222 5.55 0.00 0.00 6.13
646 693 3.268103 TTCTCCTCCAAAGCCCGGC 62.268 63.158 0.00 0.00 0.00 6.13
649 696 1.630878 TCTTCTTCTCCTCCAAAGCCC 59.369 52.381 0.00 0.00 0.00 5.19
650 697 3.008485 TCTTCTTCTTCTCCTCCAAAGCC 59.992 47.826 0.00 0.00 0.00 4.35
655 718 4.029520 CCTGATCTTCTTCTTCTCCTCCA 58.970 47.826 0.00 0.00 0.00 3.86
670 733 2.238395 GCCAAGAAAGAGGACCTGATCT 59.762 50.000 0.00 0.00 0.00 2.75
671 734 2.637947 GCCAAGAAAGAGGACCTGATC 58.362 52.381 0.00 0.00 0.00 2.92
672 735 1.283321 GGCCAAGAAAGAGGACCTGAT 59.717 52.381 0.00 0.00 0.00 2.90
702 765 4.532834 GAAGTAGTATTGATTTGGGGGCA 58.467 43.478 0.00 0.00 0.00 5.36
720 783 9.026121 GGCGATATATATGTATATCTGGGAAGT 57.974 37.037 20.74 0.00 43.52 3.01
721 784 9.025041 TGGCGATATATATGTATATCTGGGAAG 57.975 37.037 20.74 9.98 43.52 3.46
722 785 8.803235 GTGGCGATATATATGTATATCTGGGAA 58.197 37.037 20.74 5.89 43.52 3.97
723 786 7.947890 TGTGGCGATATATATGTATATCTGGGA 59.052 37.037 20.74 5.92 43.52 4.37
724 787 8.122472 TGTGGCGATATATATGTATATCTGGG 57.878 38.462 20.74 11.01 43.52 4.45
725 788 9.794685 GATGTGGCGATATATATGTATATCTGG 57.205 37.037 20.74 11.53 43.52 3.86
728 791 9.709600 CGAGATGTGGCGATATATATGTATATC 57.290 37.037 15.88 15.88 42.81 1.63
729 792 8.184848 GCGAGATGTGGCGATATATATGTATAT 58.815 37.037 0.00 1.89 36.44 0.86
730 793 7.361799 GGCGAGATGTGGCGATATATATGTATA 60.362 40.741 0.00 0.00 0.00 1.47
764 827 1.030457 GCAGCAGAAGATCCAATGGG 58.970 55.000 0.00 0.00 0.00 4.00
786 849 4.760047 AGATGGCGCGCGAGGTTT 62.760 61.111 37.18 12.70 0.00 3.27
794 857 3.781770 GAGGAGGACAGATGGCGCG 62.782 68.421 0.00 0.00 0.00 6.86
795 858 2.107953 GAGGAGGACAGATGGCGC 59.892 66.667 0.00 0.00 0.00 6.53
846 911 2.689983 GAGTGGTATTTGCAGGATTGGG 59.310 50.000 0.00 0.00 0.00 4.12
849 914 4.455606 GCTAGAGTGGTATTTGCAGGATT 58.544 43.478 0.00 0.00 0.00 3.01
852 917 2.565841 GGCTAGAGTGGTATTTGCAGG 58.434 52.381 0.00 0.00 0.00 4.85
857 922 2.034305 CGCTACGGCTAGAGTGGTATTT 59.966 50.000 0.00 0.00 36.09 1.40
859 924 1.236628 CGCTACGGCTAGAGTGGTAT 58.763 55.000 0.00 0.00 36.09 2.73
860 925 1.442526 GCGCTACGGCTAGAGTGGTA 61.443 60.000 0.00 0.00 36.09 3.25
885 985 2.106477 AGGTAGAGAAAAGCTGCTGC 57.894 50.000 1.35 7.62 40.05 5.25
894 994 3.195825 GTGGCAGAGCTTAGGTAGAGAAA 59.804 47.826 0.00 0.00 0.00 2.52
896 996 2.379972 GTGGCAGAGCTTAGGTAGAGA 58.620 52.381 0.00 0.00 0.00 3.10
901 1001 1.986413 CTGGTGGCAGAGCTTAGGT 59.014 57.895 0.00 0.00 0.00 3.08
902 1002 1.451028 GCTGGTGGCAGAGCTTAGG 60.451 63.158 10.50 0.00 41.35 2.69
904 1004 2.223443 TGGCTGGTGGCAGAGCTTA 61.223 57.895 15.89 5.47 44.10 3.09
911 1011 0.544357 AGTAGTACTGGCTGGTGGCA 60.544 55.000 5.39 0.00 46.87 4.92
912 1012 0.175989 GAGTAGTACTGGCTGGTGGC 59.824 60.000 7.76 0.00 40.90 5.01
913 1013 0.824759 GGAGTAGTACTGGCTGGTGG 59.175 60.000 7.76 0.00 0.00 4.61
916 1016 1.342076 TGGAGGAGTAGTACTGGCTGG 60.342 57.143 7.76 0.00 0.00 4.85
917 1017 2.028130 CTGGAGGAGTAGTACTGGCTG 58.972 57.143 7.76 0.00 0.00 4.85
930 1034 0.105194 TCCTTGTGTGTCCTGGAGGA 60.105 55.000 0.00 0.00 43.08 3.71
931 1035 0.035458 GTCCTTGTGTGTCCTGGAGG 59.965 60.000 0.00 0.00 0.00 4.30
947 1051 2.100605 AGACGCAATCTTTCCTGTCC 57.899 50.000 0.00 0.00 31.62 4.02
1080 1188 1.930251 AGGTGTAGAGCTTGCTGAGA 58.070 50.000 0.00 0.00 0.00 3.27
1164 1272 3.691342 TGGACCACCCGCGAGAAG 61.691 66.667 8.23 0.00 37.93 2.85
1420 1528 1.144936 CCTCGATGGCCTCCTTGAC 59.855 63.158 3.32 0.00 0.00 3.18
1488 1597 1.140452 GCAGATGCAGATCCAGGAAGA 59.860 52.381 0.00 0.00 41.59 2.87
1534 1658 4.196965 CAGCGCAGATGCAGAAGA 57.803 55.556 11.47 0.00 36.84 2.87
1567 1692 7.988599 TGAATGAAATGGGATTGGATTGAATTC 59.011 33.333 0.00 0.00 0.00 2.17
1614 1760 3.506455 CCCATGCGTATACTACTAGCAGT 59.494 47.826 0.31 0.31 41.34 4.40
1617 1763 4.440250 CCATCCCATGCGTATACTACTAGC 60.440 50.000 0.56 0.00 0.00 3.42
1624 1770 1.338769 GGTCCCATCCCATGCGTATAC 60.339 57.143 0.00 0.00 0.00 1.47
1627 1773 1.275421 TTGGTCCCATCCCATGCGTA 61.275 55.000 0.00 0.00 0.00 4.42
1628 1774 2.148723 TTTGGTCCCATCCCATGCGT 62.149 55.000 0.00 0.00 0.00 5.24
1629 1775 0.756442 ATTTGGTCCCATCCCATGCG 60.756 55.000 0.00 0.00 0.00 4.73
1630 1776 1.043022 GATTTGGTCCCATCCCATGC 58.957 55.000 0.00 0.00 0.00 4.06
1655 1806 6.625532 AAATTTGCTGAAATTATGGGGAGT 57.374 33.333 0.00 0.00 40.27 3.85
1691 1843 3.960313 AACCCCTGCCTCCCCTCT 61.960 66.667 0.00 0.00 0.00 3.69
1749 1905 6.169557 AGCAACATCATATTAGTACCGGAA 57.830 37.500 9.46 0.00 0.00 4.30
1753 1909 8.585881 TCCTCTAAGCAACATCATATTAGTACC 58.414 37.037 0.00 0.00 0.00 3.34
1760 1916 7.160049 CACATCTCCTCTAAGCAACATCATAT 58.840 38.462 0.00 0.00 0.00 1.78
1763 1919 4.383444 CCACATCTCCTCTAAGCAACATCA 60.383 45.833 0.00 0.00 0.00 3.07
1767 1925 3.526534 GACCACATCTCCTCTAAGCAAC 58.473 50.000 0.00 0.00 0.00 4.17
1793 1951 2.359900 GACCTGAGGTTGCTAATGGTG 58.640 52.381 5.21 0.00 35.25 4.17
1796 1954 3.356529 AAGGACCTGAGGTTGCTAATG 57.643 47.619 5.21 0.00 35.25 1.90
1801 1959 0.538287 AGCAAAGGACCTGAGGTTGC 60.538 55.000 16.24 16.24 36.36 4.17
1802 1960 2.859165 TAGCAAAGGACCTGAGGTTG 57.141 50.000 5.21 0.25 35.25 3.77
1803 1961 3.876309 TTTAGCAAAGGACCTGAGGTT 57.124 42.857 5.21 0.00 35.25 3.50
1804 1962 3.876309 TTTTAGCAAAGGACCTGAGGT 57.124 42.857 2.41 2.41 39.44 3.85
1805 1963 3.888930 TGTTTTTAGCAAAGGACCTGAGG 59.111 43.478 0.00 0.00 0.00 3.86
1806 1964 5.163561 TGTTGTTTTTAGCAAAGGACCTGAG 60.164 40.000 0.00 0.00 0.00 3.35
1807 1965 4.707448 TGTTGTTTTTAGCAAAGGACCTGA 59.293 37.500 0.00 0.00 0.00 3.86
1808 1966 5.004922 TGTTGTTTTTAGCAAAGGACCTG 57.995 39.130 0.00 0.00 0.00 4.00
1809 1967 4.953579 TCTGTTGTTTTTAGCAAAGGACCT 59.046 37.500 0.00 0.00 0.00 3.85
1810 1968 5.257082 TCTGTTGTTTTTAGCAAAGGACC 57.743 39.130 0.00 0.00 0.00 4.46
1898 2087 6.336842 AGAAAAGAAACATTCATCCACTGG 57.663 37.500 0.00 0.00 0.00 4.00
1925 2125 0.921896 ACCTCAATGTCCTGGATGGG 59.078 55.000 0.00 0.00 36.20 4.00
1926 2126 1.561076 TCACCTCAATGTCCTGGATGG 59.439 52.381 0.00 0.00 37.10 3.51
2192 2392 4.326766 CACCGCACCAAAGCCACG 62.327 66.667 0.00 0.00 0.00 4.94
2203 2403 3.693382 CTCGCACCGTATCACCGCA 62.693 63.158 0.00 0.00 0.00 5.69
2206 2406 1.226888 GTCCTCGCACCGTATCACC 60.227 63.158 0.00 0.00 0.00 4.02
2245 2445 5.000591 TCAATCTCTATGTTGCCGACAAAA 58.999 37.500 0.00 0.00 42.62 2.44
2251 2451 3.247173 GCTCTTCAATCTCTATGTTGCCG 59.753 47.826 0.00 0.00 0.00 5.69
2254 2454 4.874396 TGCTGCTCTTCAATCTCTATGTTG 59.126 41.667 0.00 0.00 0.00 3.33
2266 2466 1.671379 CTGCTGCTGCTGCTCTTCA 60.671 57.895 27.67 10.07 40.48 3.02
2344 2547 2.590391 AAACCACCACGCCGTACACA 62.590 55.000 0.00 0.00 0.00 3.72
2446 2649 2.542595 GGACATAAGGACGTAAATGGCG 59.457 50.000 0.00 0.00 0.00 5.69
2461 2664 2.748209 TGAGGACGAGGATGGACATA 57.252 50.000 0.00 0.00 0.00 2.29
2497 2700 2.556287 GCAAGGCCAAAGACGACG 59.444 61.111 5.01 0.00 0.00 5.12
2528 2731 0.703488 TTCATCCTGCCATCCACCAA 59.297 50.000 0.00 0.00 0.00 3.67
2566 2769 3.067742 CGTAGATGTTGTCGGGGTTATCT 59.932 47.826 0.00 0.00 0.00 1.98
2761 2964 2.359850 TTGGACGTCCTGGCATGC 60.360 61.111 33.39 9.90 36.82 4.06
2773 2976 1.149148 GCTCCTCGTTCAAGTTGGAC 58.851 55.000 3.99 3.99 0.00 4.02
2794 2997 1.065928 GATCGTGTAGACCTGGCCG 59.934 63.158 0.00 0.00 0.00 6.13
2809 3012 1.269998 CCGGTCTTATCGGTGAGGATC 59.730 57.143 0.00 0.00 42.33 3.36
2812 3015 0.754217 TCCCGGTCTTATCGGTGAGG 60.754 60.000 0.00 0.00 45.51 3.86
2913 3116 1.270550 CGTTTCTCTTTGCCATGGCTT 59.729 47.619 35.53 0.00 42.51 4.35
2917 3120 2.351738 GGAACCGTTTCTCTTTGCCATG 60.352 50.000 0.00 0.00 31.71 3.66
2947 3150 1.293924 CGCCGAGCTCAAAATCAGAT 58.706 50.000 15.40 0.00 0.00 2.90
2992 3195 6.825721 AGTTAAATCCTTTGATCGCAGATCTT 59.174 34.615 15.99 6.30 45.12 2.40
3067 3270 2.969628 AGAACATCTCGATCACACCC 57.030 50.000 0.00 0.00 0.00 4.61
3136 3339 2.286872 TCGTACGAGATCTTCCCTGTC 58.713 52.381 15.28 0.00 0.00 3.51
3265 3468 3.181461 ACCTGTCAACTTGTTCTCCAGAG 60.181 47.826 0.00 0.00 0.00 3.35
3295 3498 7.454260 AGAAAAACTGACTGAAGTTGAAACT 57.546 32.000 2.23 0.00 40.28 2.66
3306 3509 9.787532 TTTACATGAGAAAAGAAAAACTGACTG 57.212 29.630 0.00 0.00 0.00 3.51
3307 3510 9.788960 GTTTACATGAGAAAAGAAAAACTGACT 57.211 29.630 0.00 0.00 0.00 3.41
3323 3526 6.805271 CAGCTCCTGAATTTTGTTTACATGAG 59.195 38.462 0.00 0.00 32.44 2.90
3389 3603 5.418840 ACATGCAAGACCTTATAAAACCTGG 59.581 40.000 0.00 0.00 0.00 4.45
3631 3874 3.633235 CTTCTGCGTCGCTTCACTATAT 58.367 45.455 19.50 0.00 0.00 0.86
3635 3878 2.024319 GCTTCTGCGTCGCTTCACT 61.024 57.895 19.50 0.00 0.00 3.41
3670 3913 1.078918 TGTTCTCAGGCCAGCATCG 60.079 57.895 5.01 0.00 0.00 3.84
3790 4033 0.529337 AATCTGCAGCCTCGTCGATG 60.529 55.000 9.47 0.00 0.00 3.84
3879 4122 7.757097 TTACAGCACGAAAGAAGATAAGATC 57.243 36.000 0.00 0.00 0.00 2.75
3918 4165 3.551485 CGCAAACCAAAGAGAAAAAGTGG 59.449 43.478 0.00 0.00 35.39 4.00
3919 4166 3.000222 GCGCAAACCAAAGAGAAAAAGTG 60.000 43.478 0.30 0.00 0.00 3.16
4023 4280 1.191489 TGGCGGTCTCCATCTTGTCA 61.191 55.000 0.00 0.00 0.00 3.58
4285 4554 6.489361 GGAGAATTGGTCCGTCTACTATAAGA 59.511 42.308 0.00 0.00 0.00 2.10
4295 4574 5.176958 CGTTATTATGGAGAATTGGTCCGTC 59.823 44.000 2.03 0.00 36.82 4.79
4309 4588 6.201517 CACAAAATGGAGCTCGTTATTATGG 58.798 40.000 7.83 4.79 0.00 2.74
4310 4589 5.682862 GCACAAAATGGAGCTCGTTATTATG 59.317 40.000 7.83 8.79 0.00 1.90
4311 4590 5.356751 TGCACAAAATGGAGCTCGTTATTAT 59.643 36.000 7.83 0.00 0.00 1.28
4312 4591 4.697828 TGCACAAAATGGAGCTCGTTATTA 59.302 37.500 7.83 0.00 0.00 0.98
4313 4592 3.505680 TGCACAAAATGGAGCTCGTTATT 59.494 39.130 7.83 5.70 0.00 1.40
4334 4613 6.591062 ACAACAAAAATATGCAGGCAGTTATG 59.409 34.615 0.00 3.96 0.00 1.90
4335 4614 6.700352 ACAACAAAAATATGCAGGCAGTTAT 58.300 32.000 0.00 0.00 0.00 1.89
4338 4617 4.605640 ACAACAAAAATATGCAGGCAGT 57.394 36.364 0.00 0.00 0.00 4.40
4339 4618 4.989797 TCAACAACAAAAATATGCAGGCAG 59.010 37.500 0.00 0.00 0.00 4.85
4340 4619 4.953667 TCAACAACAAAAATATGCAGGCA 58.046 34.783 0.00 0.00 0.00 4.75
4341 4620 5.466393 AGTTCAACAACAAAAATATGCAGGC 59.534 36.000 0.00 0.00 34.60 4.85
4342 4621 6.700960 TCAGTTCAACAACAAAAATATGCAGG 59.299 34.615 0.00 0.00 34.60 4.85
4344 4623 7.763528 AGTTCAGTTCAACAACAAAAATATGCA 59.236 29.630 0.00 0.00 34.60 3.96
4345 4624 8.057742 CAGTTCAGTTCAACAACAAAAATATGC 58.942 33.333 0.00 0.00 34.60 3.14
4346 4625 9.086336 ACAGTTCAGTTCAACAACAAAAATATG 57.914 29.630 0.00 0.00 34.60 1.78
4348 4627 8.519526 AGACAGTTCAGTTCAACAACAAAAATA 58.480 29.630 0.00 0.00 34.60 1.40
4349 4628 7.329226 CAGACAGTTCAGTTCAACAACAAAAAT 59.671 33.333 0.00 0.00 34.60 1.82
4353 4632 4.379394 GCAGACAGTTCAGTTCAACAACAA 60.379 41.667 0.00 0.00 34.60 2.83
4354 4633 3.126858 GCAGACAGTTCAGTTCAACAACA 59.873 43.478 0.00 0.00 34.60 3.33
4355 4634 3.126858 TGCAGACAGTTCAGTTCAACAAC 59.873 43.478 0.00 0.00 0.00 3.32
4356 4635 3.342719 TGCAGACAGTTCAGTTCAACAA 58.657 40.909 0.00 0.00 0.00 2.83
4357 4636 2.984562 TGCAGACAGTTCAGTTCAACA 58.015 42.857 0.00 0.00 0.00 3.33
4358 4637 5.869753 ATATGCAGACAGTTCAGTTCAAC 57.130 39.130 0.00 0.00 0.00 3.18
4359 4638 5.997129 TCAATATGCAGACAGTTCAGTTCAA 59.003 36.000 0.00 0.00 0.00 2.69
4360 4639 5.550290 TCAATATGCAGACAGTTCAGTTCA 58.450 37.500 0.00 0.00 0.00 3.18
4361 4640 6.314648 TGATCAATATGCAGACAGTTCAGTTC 59.685 38.462 0.00 0.00 0.00 3.01
4362 4641 6.175471 TGATCAATATGCAGACAGTTCAGTT 58.825 36.000 0.00 0.00 0.00 3.16
4363 4642 5.737860 TGATCAATATGCAGACAGTTCAGT 58.262 37.500 0.00 0.00 0.00 3.41
4364 4643 6.673154 TTGATCAATATGCAGACAGTTCAG 57.327 37.500 3.38 0.00 0.00 3.02
4365 4644 6.430616 TGTTTGATCAATATGCAGACAGTTCA 59.569 34.615 9.40 0.00 0.00 3.18
4366 4645 6.744537 GTGTTTGATCAATATGCAGACAGTTC 59.255 38.462 9.40 0.00 28.95 3.01
4436 4721 3.423154 GACCTTTGACGCCTGCCG 61.423 66.667 0.00 0.00 44.21 5.69
4453 4746 1.443194 GATTTGCTGCACCACGCTG 60.443 57.895 0.00 0.00 43.06 5.18
4673 4969 2.649312 TCCTGGGATGGAAGAACACAAT 59.351 45.455 0.00 0.00 32.39 2.71
4778 5080 1.140161 CACCATCGCCAATTGCCAG 59.860 57.895 0.00 0.00 36.24 4.85
4801 5103 3.072038 CCTCCTGAATCATGCCTACATCA 59.928 47.826 0.00 0.00 32.87 3.07
4882 5184 0.729140 GGAACTGCGCAATGGAAACG 60.729 55.000 13.05 0.00 0.00 3.60
4918 5220 2.621407 CCAATGCCCATGGACAAGTAGT 60.621 50.000 15.22 0.00 40.56 2.73
4988 5290 5.814705 AGCAGAAGAGTAGTAATTCACATGC 59.185 40.000 0.00 0.00 0.00 4.06
5072 5378 4.770795 AGTAGCATACCTGTTGATCCAAC 58.229 43.478 3.10 3.10 44.47 3.77
5120 5432 0.388134 CGTACAGGAACAGGGTCACG 60.388 60.000 0.00 0.00 0.00 4.35
5156 5468 3.181495 CGTTGTACAAAGTTTGGCCAGAA 60.181 43.478 19.45 0.29 34.12 3.02
5192 5504 2.155155 CGTGAAAAGGACGTTGTAGAGC 59.845 50.000 0.00 0.00 32.06 4.09
5201 5513 1.487231 CAGCGACGTGAAAAGGACG 59.513 57.895 0.00 0.00 42.62 4.79
5285 5597 1.460504 TCTTCAGACCGATGTAGCGT 58.539 50.000 0.00 0.00 0.00 5.07
5290 5602 9.613428 TTGATTAATTAATCTTCAGACCGATGT 57.387 29.630 29.37 0.00 41.93 3.06
5293 5605 8.559536 GCATTGATTAATTAATCTTCAGACCGA 58.440 33.333 29.37 10.92 41.93 4.69
5294 5606 8.562892 AGCATTGATTAATTAATCTTCAGACCG 58.437 33.333 29.37 15.17 41.93 4.79
5295 5607 9.674824 CAGCATTGATTAATTAATCTTCAGACC 57.325 33.333 29.37 15.86 41.93 3.85
5297 5609 9.631257 TCCAGCATTGATTAATTAATCTTCAGA 57.369 29.630 29.37 17.74 41.93 3.27
5337 5651 3.582647 TCCAGAAGTAGTGAGCAATTCCA 59.417 43.478 0.00 0.00 0.00 3.53
5351 5665 5.648092 GGTACTGCATTGTATTTCCAGAAGT 59.352 40.000 0.00 0.00 0.00 3.01
5352 5666 5.066505 GGGTACTGCATTGTATTTCCAGAAG 59.933 44.000 0.00 0.00 0.00 2.85
5363 5677 0.253044 AGCATCGGGTACTGCATTGT 59.747 50.000 7.48 0.00 40.88 2.71
5482 5801 2.432456 TGCTTGAGCGACGCGATT 60.432 55.556 15.93 0.00 45.83 3.34
5672 5991 5.654317 TTAGTTGTCGTCGCTAGATAGAG 57.346 43.478 0.00 0.00 0.00 2.43
5675 5994 9.013490 GTTAATTTTAGTTGTCGTCGCTAGATA 57.987 33.333 0.00 0.00 0.00 1.98
5676 5995 7.009907 GGTTAATTTTAGTTGTCGTCGCTAGAT 59.990 37.037 0.00 0.00 0.00 1.98
5677 5996 6.308766 GGTTAATTTTAGTTGTCGTCGCTAGA 59.691 38.462 0.00 0.00 0.00 2.43
5678 5997 6.089820 TGGTTAATTTTAGTTGTCGTCGCTAG 59.910 38.462 0.00 0.00 0.00 3.42
5679 5998 5.925397 TGGTTAATTTTAGTTGTCGTCGCTA 59.075 36.000 0.00 0.00 0.00 4.26
5706 6025 6.073003 GGTCAGAAAAATAGTGAGTGAGTTGG 60.073 42.308 0.00 0.00 0.00 3.77
5720 6039 7.069331 TGGTATTGTCAGTTTGGTCAGAAAAAT 59.931 33.333 0.00 0.00 0.00 1.82
5741 6069 1.912043 AGGCAGCAGAAAGAGTGGTAT 59.088 47.619 0.00 0.00 0.00 2.73
5917 6247 3.041940 CACGTCTTCACCACCGCC 61.042 66.667 0.00 0.00 0.00 6.13
6110 6440 1.812214 GATTGCGACGATGAGTCCGC 61.812 60.000 0.00 0.00 46.92 5.54
6111 6441 0.525455 TGATTGCGACGATGAGTCCG 60.525 55.000 0.00 0.00 46.92 4.79
6121 6454 1.210155 GGTGGCTTGTGATTGCGAC 59.790 57.895 0.00 0.00 37.22 5.19
6124 6457 0.664166 CAACGGTGGCTTGTGATTGC 60.664 55.000 0.00 0.00 0.00 3.56
6173 6506 4.281688 TGCATGCTGCTGATATCTAGTGTA 59.718 41.667 20.33 0.00 45.31 2.90
6312 6658 4.705519 TCGACGACGAAACCCGCC 62.706 66.667 7.68 0.00 45.74 6.13
6323 6669 5.138125 ACAGTTAAACCCTAATTCGACGA 57.862 39.130 0.00 0.00 0.00 4.20
6370 6729 2.237392 CCTCCCTTTTGCAGCTACTAGT 59.763 50.000 0.00 0.00 0.00 2.57
6371 6730 2.420687 CCCTCCCTTTTGCAGCTACTAG 60.421 54.545 0.00 0.00 0.00 2.57
6372 6731 1.559682 CCCTCCCTTTTGCAGCTACTA 59.440 52.381 0.00 0.00 0.00 1.82
6745 7104 6.580788 TCCATTCTTTCAATGACAGCAAAAA 58.419 32.000 0.00 0.00 0.00 1.94
6746 7105 6.159299 TCCATTCTTTCAATGACAGCAAAA 57.841 33.333 0.00 0.00 0.00 2.44
6747 7106 5.787953 TCCATTCTTTCAATGACAGCAAA 57.212 34.783 0.00 0.00 0.00 3.68
6748 7107 5.716094 CATCCATTCTTTCAATGACAGCAA 58.284 37.500 0.00 0.00 0.00 3.91
6749 7108 4.381185 GCATCCATTCTTTCAATGACAGCA 60.381 41.667 0.00 0.00 0.00 4.41
6750 7109 4.110482 GCATCCATTCTTTCAATGACAGC 58.890 43.478 0.00 0.00 0.00 4.40
6751 7110 4.348656 CGCATCCATTCTTTCAATGACAG 58.651 43.478 0.00 0.00 0.00 3.51
6752 7111 3.427909 GCGCATCCATTCTTTCAATGACA 60.428 43.478 0.30 0.00 0.00 3.58
6753 7112 3.111098 GCGCATCCATTCTTTCAATGAC 58.889 45.455 0.30 0.00 0.00 3.06
6754 7113 3.018856 AGCGCATCCATTCTTTCAATGA 58.981 40.909 11.47 0.00 0.00 2.57
6755 7114 3.066342 AGAGCGCATCCATTCTTTCAATG 59.934 43.478 11.47 0.00 0.00 2.82
6756 7115 3.285484 AGAGCGCATCCATTCTTTCAAT 58.715 40.909 11.47 0.00 0.00 2.57
6757 7116 2.715046 AGAGCGCATCCATTCTTTCAA 58.285 42.857 11.47 0.00 0.00 2.69
6758 7117 2.408271 AGAGCGCATCCATTCTTTCA 57.592 45.000 11.47 0.00 0.00 2.69
6773 7162 1.262683 GCGATATCAGCACCAAAGAGC 59.737 52.381 12.62 0.00 34.19 4.09
6848 7266 0.040499 GGGCCCCTTTGAACACCATA 59.960 55.000 12.23 0.00 0.00 2.74
6886 7396 9.607988 AAAAAGGTTGTATTTCAAAGGGTAAAG 57.392 29.630 0.00 0.00 37.81 1.85
6887 7397 9.602568 GAAAAAGGTTGTATTTCAAAGGGTAAA 57.397 29.630 0.00 0.00 37.81 2.01
6888 7398 8.205512 GGAAAAAGGTTGTATTTCAAAGGGTAA 58.794 33.333 0.00 0.00 37.81 2.85
6889 7399 7.565768 AGGAAAAAGGTTGTATTTCAAAGGGTA 59.434 33.333 0.00 0.00 37.81 3.69
6890 7400 6.385759 AGGAAAAAGGTTGTATTTCAAAGGGT 59.614 34.615 0.00 0.00 37.81 4.34
6891 7401 6.826668 AGGAAAAAGGTTGTATTTCAAAGGG 58.173 36.000 0.00 0.00 37.81 3.95
6892 7402 8.731275 AAAGGAAAAAGGTTGTATTTCAAAGG 57.269 30.769 0.00 0.00 37.81 3.11
6964 7600 7.713507 CCAGAAATTCATACCCGTATCTTTGTA 59.286 37.037 0.00 0.00 0.00 2.41
6965 7601 6.542370 CCAGAAATTCATACCCGTATCTTTGT 59.458 38.462 0.00 0.00 0.00 2.83
6966 7602 6.017109 CCCAGAAATTCATACCCGTATCTTTG 60.017 42.308 0.00 0.00 0.00 2.77
6968 7604 5.132144 ACCCAGAAATTCATACCCGTATCTT 59.868 40.000 0.00 0.00 0.00 2.40
6970 7606 4.969484 ACCCAGAAATTCATACCCGTATC 58.031 43.478 0.00 0.00 0.00 2.24
6971 7607 6.271391 TCATACCCAGAAATTCATACCCGTAT 59.729 38.462 0.00 0.00 0.00 3.06
6973 7609 4.410883 TCATACCCAGAAATTCATACCCGT 59.589 41.667 0.00 0.00 0.00 5.28
6974 7610 4.968259 TCATACCCAGAAATTCATACCCG 58.032 43.478 0.00 0.00 0.00 5.28
6976 7612 6.881602 GGATCTCATACCCAGAAATTCATACC 59.118 42.308 0.00 0.00 0.00 2.73
6978 7614 7.631510 TGGATCTCATACCCAGAAATTCATA 57.368 36.000 0.00 0.00 0.00 2.15
6979 7615 6.520021 TGGATCTCATACCCAGAAATTCAT 57.480 37.500 0.00 0.00 0.00 2.57
6980 7616 5.974156 TGGATCTCATACCCAGAAATTCA 57.026 39.130 0.00 0.00 0.00 2.57
6981 7617 7.830099 ATTTGGATCTCATACCCAGAAATTC 57.170 36.000 0.00 0.00 0.00 2.17
6982 7618 7.725844 GGTATTTGGATCTCATACCCAGAAATT 59.274 37.037 13.48 0.00 37.52 1.82
6983 7619 7.074237 AGGTATTTGGATCTCATACCCAGAAAT 59.926 37.037 17.80 0.00 42.46 2.17
6984 7620 6.389869 AGGTATTTGGATCTCATACCCAGAAA 59.610 38.462 17.80 0.00 42.46 2.52
6985 7621 5.911178 AGGTATTTGGATCTCATACCCAGAA 59.089 40.000 17.80 0.00 42.46 3.02
6987 7623 5.832539 AGGTATTTGGATCTCATACCCAG 57.167 43.478 17.80 0.00 42.46 4.45
6988 7624 7.699709 TTTAGGTATTTGGATCTCATACCCA 57.300 36.000 17.80 8.02 42.46 4.51
6989 7625 8.218488 AGTTTTAGGTATTTGGATCTCATACCC 58.782 37.037 17.80 8.21 42.46 3.69
6990 7626 9.057089 CAGTTTTAGGTATTTGGATCTCATACC 57.943 37.037 15.39 15.39 41.99 2.73
7001 7637 6.677913 CCACCTGTTCAGTTTTAGGTATTTG 58.322 40.000 0.00 0.00 41.42 2.32
7122 7762 4.999950 CCTGTCAATGTTAGGCCATCTATC 59.000 45.833 5.01 0.00 0.00 2.08
7123 7763 4.660303 TCCTGTCAATGTTAGGCCATCTAT 59.340 41.667 5.01 0.00 0.00 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.