Multiple sequence alignment - TraesCS1B01G481000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G481000 chr1B 100.000 2754 0 0 1 2754 688982122 688984875 0.000000e+00 5086.0
1 TraesCS1B01G481000 chr1B 91.892 740 41 7 1 732 354546729 354547457 0.000000e+00 1016.0
2 TraesCS1B01G481000 chr2B 90.650 738 30 15 1 732 706566166 706565462 0.000000e+00 944.0
3 TraesCS1B01G481000 chr3B 85.054 736 65 28 1 728 770743763 770743065 0.000000e+00 708.0
4 TraesCS1B01G481000 chr3B 91.176 68 3 1 1330 1394 139036502 139036435 3.780000e-14 89.8
5 TraesCS1B01G481000 chr3B 92.453 53 1 2 1341 1390 131575415 131575363 3.800000e-09 73.1
6 TraesCS1B01G481000 chr1A 85.207 676 54 26 2098 2749 591291756 591291103 0.000000e+00 652.0
7 TraesCS1B01G481000 chr1A 90.724 442 20 5 902 1329 591293163 591292729 1.110000e-158 569.0
8 TraesCS1B01G481000 chr1A 82.867 607 45 22 1476 2060 591292676 591292107 8.860000e-135 490.0
9 TraesCS1B01G481000 chr2D 80.583 618 84 26 94 697 74784361 74784956 7.000000e-121 444.0
10 TraesCS1B01G481000 chr1D 83.376 391 37 10 732 1109 492802567 492802192 1.220000e-88 337.0
11 TraesCS1B01G481000 chrUn 82.609 391 40 13 732 1109 11490314 11490689 1.230000e-83 320.0
12 TraesCS1B01G481000 chrUn 82.398 392 40 11 732 1109 359539298 359538922 5.730000e-82 315.0
13 TraesCS1B01G481000 chr4B 76.877 506 86 21 96 590 124597904 124598389 9.790000e-65 257.0
14 TraesCS1B01G481000 chr4B 94.643 56 0 1 1341 1393 215867014 215867069 1.760000e-12 84.2
15 TraesCS1B01G481000 chr4B 89.831 59 3 2 1339 1394 629885387 629885329 3.800000e-09 73.1
16 TraesCS1B01G481000 chr4B 97.059 34 1 0 1810 1843 148582023 148581990 1.070000e-04 58.4
17 TraesCS1B01G481000 chr7A 79.863 293 46 12 277 561 730675844 730675557 4.650000e-48 202.0
18 TraesCS1B01G481000 chr7A 79.775 267 43 11 265 525 730695331 730695070 1.680000e-42 183.0
19 TraesCS1B01G481000 chr7A 92.857 56 1 1 1341 1393 98767764 98767819 8.180000e-11 78.7
20 TraesCS1B01G481000 chr7D 82.514 183 19 8 531 709 613690718 613690545 6.140000e-32 148.0
21 TraesCS1B01G481000 chr7D 91.379 58 1 2 1337 1390 490349108 490349051 2.940000e-10 76.8
22 TraesCS1B01G481000 chr7D 97.059 34 1 0 1810 1843 146536425 146536392 1.070000e-04 58.4
23 TraesCS1B01G481000 chr5D 74.434 309 55 20 94 392 522302408 522302114 8.060000e-21 111.0
24 TraesCS1B01G481000 chr5D 100.000 30 0 0 1810 1839 126260292 126260321 3.830000e-04 56.5
25 TraesCS1B01G481000 chr5D 100.000 30 0 0 1810 1839 382491802 382491831 3.830000e-04 56.5
26 TraesCS1B01G481000 chr5D 100.000 30 0 0 1810 1839 416973447 416973418 3.830000e-04 56.5
27 TraesCS1B01G481000 chr6B 91.228 57 2 2 1341 1394 153960378 153960322 1.060000e-09 75.0
28 TraesCS1B01G481000 chr3D 92.593 54 1 1 1341 1391 327739366 327739419 1.060000e-09 75.0
29 TraesCS1B01G481000 chr3D 97.059 34 1 0 1810 1843 278727797 278727764 1.070000e-04 58.4
30 TraesCS1B01G481000 chr3D 100.000 30 0 0 1810 1839 137132506 137132477 3.830000e-04 56.5
31 TraesCS1B01G481000 chr6D 89.474 57 3 1 1338 1391 453014857 453014913 4.920000e-08 69.4
32 TraesCS1B01G481000 chr6A 97.059 34 1 0 1810 1843 392491976 392491943 1.070000e-04 58.4
33 TraesCS1B01G481000 chr6A 97.059 34 1 0 1810 1843 551444319 551444352 1.070000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G481000 chr1B 688982122 688984875 2753 False 5086.000000 5086 100.000 1 2754 1 chr1B.!!$F2 2753
1 TraesCS1B01G481000 chr1B 354546729 354547457 728 False 1016.000000 1016 91.892 1 732 1 chr1B.!!$F1 731
2 TraesCS1B01G481000 chr2B 706565462 706566166 704 True 944.000000 944 90.650 1 732 1 chr2B.!!$R1 731
3 TraesCS1B01G481000 chr3B 770743065 770743763 698 True 708.000000 708 85.054 1 728 1 chr3B.!!$R3 727
4 TraesCS1B01G481000 chr1A 591291103 591293163 2060 True 570.333333 652 86.266 902 2749 3 chr1A.!!$R1 1847
5 TraesCS1B01G481000 chr2D 74784361 74784956 595 False 444.000000 444 80.583 94 697 1 chr2D.!!$F1 603

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
758 814 0.032952 TGCCGAAGTGGACTGTGTAC 59.967 55.0 0.0 0.0 42.0 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2073 2169 0.030101 AAAAACGTGCACCGACCATG 59.97 50.0 12.15 0.0 40.7 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
439 492 5.649557 TGTGGACATTGAAGTTTTGTTCAG 58.350 37.500 0.00 0.00 37.72 3.02
600 653 1.947597 TTTGATTCCATGCGGCAGCC 61.948 55.000 9.25 0.00 44.33 4.85
619 672 1.476085 CCGGCAGCCAATTGTTTGATA 59.524 47.619 13.30 0.00 34.60 2.15
741 797 0.402121 AGGAGGTCCCTGAAAACTGC 59.598 55.000 0.00 0.00 45.61 4.40
742 798 0.609406 GGAGGTCCCTGAAAACTGCC 60.609 60.000 0.00 0.00 0.00 4.85
743 799 0.955919 GAGGTCCCTGAAAACTGCCG 60.956 60.000 0.00 0.00 0.00 5.69
744 800 1.072505 GGTCCCTGAAAACTGCCGA 59.927 57.895 0.00 0.00 0.00 5.54
745 801 0.536460 GGTCCCTGAAAACTGCCGAA 60.536 55.000 0.00 0.00 0.00 4.30
746 802 0.875059 GTCCCTGAAAACTGCCGAAG 59.125 55.000 0.00 0.00 0.00 3.79
747 803 0.472471 TCCCTGAAAACTGCCGAAGT 59.528 50.000 0.00 0.00 42.60 3.01
748 804 0.593128 CCCTGAAAACTGCCGAAGTG 59.407 55.000 0.00 0.00 39.81 3.16
749 805 0.593128 CCTGAAAACTGCCGAAGTGG 59.407 55.000 0.00 0.00 39.81 4.00
750 806 1.593196 CTGAAAACTGCCGAAGTGGA 58.407 50.000 0.00 0.00 39.81 4.02
751 807 1.264288 CTGAAAACTGCCGAAGTGGAC 59.736 52.381 0.00 0.00 39.81 4.02
752 808 1.134220 TGAAAACTGCCGAAGTGGACT 60.134 47.619 0.00 0.00 39.81 3.85
753 809 1.264288 GAAAACTGCCGAAGTGGACTG 59.736 52.381 0.00 0.00 39.81 3.51
754 810 0.180406 AAACTGCCGAAGTGGACTGT 59.820 50.000 0.00 0.00 39.81 3.55
755 811 0.532862 AACTGCCGAAGTGGACTGTG 60.533 55.000 0.00 0.00 39.81 3.66
756 812 1.069765 CTGCCGAAGTGGACTGTGT 59.930 57.895 0.00 0.00 42.00 3.72
757 813 0.317160 CTGCCGAAGTGGACTGTGTA 59.683 55.000 0.00 0.00 42.00 2.90
758 814 0.032952 TGCCGAAGTGGACTGTGTAC 59.967 55.000 0.00 0.00 42.00 2.90
759 815 1.007336 GCCGAAGTGGACTGTGTACG 61.007 60.000 0.00 0.00 42.00 3.67
760 816 0.313043 CCGAAGTGGACTGTGTACGT 59.687 55.000 0.00 0.00 42.00 3.57
761 817 1.405461 CGAAGTGGACTGTGTACGTG 58.595 55.000 0.00 0.00 0.00 4.49
762 818 1.779569 GAAGTGGACTGTGTACGTGG 58.220 55.000 0.00 0.00 0.00 4.94
763 819 0.391597 AAGTGGACTGTGTACGTGGG 59.608 55.000 0.00 0.00 0.00 4.61
764 820 1.666872 GTGGACTGTGTACGTGGGC 60.667 63.158 0.00 0.00 0.00 5.36
765 821 1.835267 TGGACTGTGTACGTGGGCT 60.835 57.895 0.00 0.00 0.00 5.19
766 822 1.374252 GGACTGTGTACGTGGGCTG 60.374 63.158 0.00 0.00 0.00 4.85
767 823 1.374252 GACTGTGTACGTGGGCTGG 60.374 63.158 0.00 0.00 0.00 4.85
768 824 2.047274 CTGTGTACGTGGGCTGGG 60.047 66.667 0.00 0.00 0.00 4.45
769 825 4.323477 TGTGTACGTGGGCTGGGC 62.323 66.667 0.00 0.00 0.00 5.36
780 836 4.666253 GCTGGGCCTTGTGCTGGA 62.666 66.667 4.53 0.00 40.92 3.86
781 837 2.360852 CTGGGCCTTGTGCTGGAG 60.361 66.667 4.53 0.00 40.92 3.86
782 838 3.177884 TGGGCCTTGTGCTGGAGT 61.178 61.111 4.53 0.00 40.92 3.85
783 839 1.841302 CTGGGCCTTGTGCTGGAGTA 61.841 60.000 4.53 0.00 40.92 2.59
784 840 1.207488 TGGGCCTTGTGCTGGAGTAT 61.207 55.000 4.53 0.00 40.92 2.12
785 841 0.837272 GGGCCTTGTGCTGGAGTATA 59.163 55.000 0.84 0.00 40.92 1.47
786 842 1.421646 GGGCCTTGTGCTGGAGTATAT 59.578 52.381 0.84 0.00 40.92 0.86
787 843 2.637872 GGGCCTTGTGCTGGAGTATATA 59.362 50.000 0.84 0.00 40.92 0.86
788 844 3.557264 GGGCCTTGTGCTGGAGTATATAC 60.557 52.174 0.84 4.60 40.92 1.47
789 845 3.557264 GGCCTTGTGCTGGAGTATATACC 60.557 52.174 9.32 1.51 40.92 2.73
790 846 3.325135 GCCTTGTGCTGGAGTATATACCT 59.675 47.826 9.32 0.00 36.87 3.08
791 847 4.800914 GCCTTGTGCTGGAGTATATACCTG 60.801 50.000 9.32 1.15 36.87 4.00
792 848 4.262635 CCTTGTGCTGGAGTATATACCTGG 60.263 50.000 9.32 0.00 0.00 4.45
793 849 3.239449 TGTGCTGGAGTATATACCTGGG 58.761 50.000 9.32 0.10 0.00 4.45
794 850 2.567615 GTGCTGGAGTATATACCTGGGG 59.432 54.545 9.32 0.00 0.00 4.96
795 851 1.555533 GCTGGAGTATATACCTGGGGC 59.444 57.143 9.32 4.82 0.00 5.80
796 852 1.825474 CTGGAGTATATACCTGGGGCG 59.175 57.143 9.32 0.00 0.00 6.13
797 853 1.430075 TGGAGTATATACCTGGGGCGA 59.570 52.381 9.32 0.00 0.00 5.54
798 854 2.100989 GGAGTATATACCTGGGGCGAG 58.899 57.143 9.32 0.00 0.00 5.03
799 855 1.477295 GAGTATATACCTGGGGCGAGC 59.523 57.143 9.32 0.00 0.00 5.03
800 856 0.172803 GTATATACCTGGGGCGAGCG 59.827 60.000 1.02 0.00 0.00 5.03
801 857 0.038599 TATATACCTGGGGCGAGCGA 59.961 55.000 0.00 0.00 0.00 4.93
802 858 1.251527 ATATACCTGGGGCGAGCGAG 61.252 60.000 0.00 0.00 0.00 5.03
810 866 4.760047 GGCGAGCGAGCAAGGGAA 62.760 66.667 8.59 0.00 39.27 3.97
811 867 2.742372 GCGAGCGAGCAAGGGAAA 60.742 61.111 0.00 0.00 37.05 3.13
812 868 2.325082 GCGAGCGAGCAAGGGAAAA 61.325 57.895 0.00 0.00 37.05 2.29
813 869 1.852067 GCGAGCGAGCAAGGGAAAAA 61.852 55.000 0.00 0.00 37.05 1.94
814 870 0.166814 CGAGCGAGCAAGGGAAAAAG 59.833 55.000 0.00 0.00 0.00 2.27
815 871 1.523758 GAGCGAGCAAGGGAAAAAGA 58.476 50.000 0.00 0.00 0.00 2.52
816 872 1.466558 GAGCGAGCAAGGGAAAAAGAG 59.533 52.381 0.00 0.00 0.00 2.85
817 873 0.109551 GCGAGCAAGGGAAAAAGAGC 60.110 55.000 0.00 0.00 0.00 4.09
818 874 1.528129 CGAGCAAGGGAAAAAGAGCT 58.472 50.000 0.00 0.00 34.61 4.09
819 875 1.882623 CGAGCAAGGGAAAAAGAGCTT 59.117 47.619 0.00 0.00 31.61 3.74
820 876 2.294512 CGAGCAAGGGAAAAAGAGCTTT 59.705 45.455 0.00 0.00 31.61 3.51
821 877 3.646946 GAGCAAGGGAAAAAGAGCTTTG 58.353 45.455 0.00 0.00 32.36 2.77
822 878 3.033909 AGCAAGGGAAAAAGAGCTTTGT 58.966 40.909 0.00 0.00 32.36 2.83
823 879 3.126073 GCAAGGGAAAAAGAGCTTTGTG 58.874 45.455 0.00 0.00 32.36 3.33
824 880 3.430790 GCAAGGGAAAAAGAGCTTTGTGT 60.431 43.478 0.00 0.00 32.36 3.72
825 881 4.758688 CAAGGGAAAAAGAGCTTTGTGTT 58.241 39.130 0.00 0.00 32.36 3.32
826 882 4.655762 AGGGAAAAAGAGCTTTGTGTTC 57.344 40.909 0.00 0.00 32.36 3.18
827 883 3.066760 AGGGAAAAAGAGCTTTGTGTTCG 59.933 43.478 0.00 0.00 32.36 3.95
828 884 3.181490 GGGAAAAAGAGCTTTGTGTTCGT 60.181 43.478 0.00 0.00 32.36 3.85
829 885 3.791353 GGAAAAAGAGCTTTGTGTTCGTG 59.209 43.478 0.00 0.00 32.36 4.35
830 886 4.412207 GAAAAAGAGCTTTGTGTTCGTGT 58.588 39.130 0.00 0.00 32.36 4.49
831 887 5.448089 GGAAAAAGAGCTTTGTGTTCGTGTA 60.448 40.000 0.00 0.00 32.36 2.90
832 888 4.795970 AAAGAGCTTTGTGTTCGTGTAG 57.204 40.909 0.00 0.00 0.00 2.74
833 889 3.728076 AGAGCTTTGTGTTCGTGTAGA 57.272 42.857 0.00 0.00 0.00 2.59
834 890 3.381949 AGAGCTTTGTGTTCGTGTAGAC 58.618 45.455 0.00 0.00 0.00 2.59
835 891 3.068307 AGAGCTTTGTGTTCGTGTAGACT 59.932 43.478 0.00 0.00 0.00 3.24
836 892 4.277672 AGAGCTTTGTGTTCGTGTAGACTA 59.722 41.667 0.00 0.00 0.00 2.59
837 893 4.940463 AGCTTTGTGTTCGTGTAGACTAA 58.060 39.130 0.00 0.00 0.00 2.24
838 894 5.353938 AGCTTTGTGTTCGTGTAGACTAAA 58.646 37.500 0.00 0.00 0.00 1.85
839 895 5.813672 AGCTTTGTGTTCGTGTAGACTAAAA 59.186 36.000 0.00 0.00 0.00 1.52
840 896 6.314400 AGCTTTGTGTTCGTGTAGACTAAAAA 59.686 34.615 0.00 0.00 0.00 1.94
864 920 5.537300 AAAGGAAAAGGAAAAAGAGCTCC 57.463 39.130 10.93 0.00 0.00 4.70
865 921 3.501349 AGGAAAAGGAAAAAGAGCTCCC 58.499 45.455 10.93 3.72 31.50 4.30
866 922 2.563179 GGAAAAGGAAAAAGAGCTCCCC 59.437 50.000 10.93 4.41 31.50 4.81
867 923 3.501349 GAAAAGGAAAAAGAGCTCCCCT 58.499 45.455 10.93 6.74 31.50 4.79
868 924 4.508584 GGAAAAGGAAAAAGAGCTCCCCTA 60.509 45.833 10.93 0.00 31.50 3.53
869 925 4.741928 AAAGGAAAAAGAGCTCCCCTAA 57.258 40.909 10.93 0.00 31.50 2.69
870 926 4.955693 AAGGAAAAAGAGCTCCCCTAAT 57.044 40.909 10.93 0.00 31.50 1.73
871 927 4.511786 AGGAAAAAGAGCTCCCCTAATC 57.488 45.455 10.93 1.77 31.50 1.75
872 928 3.118223 AGGAAAAAGAGCTCCCCTAATCG 60.118 47.826 10.93 0.00 31.50 3.34
873 929 3.118371 GGAAAAAGAGCTCCCCTAATCGA 60.118 47.826 10.93 0.00 0.00 3.59
874 930 4.445019 GGAAAAAGAGCTCCCCTAATCGAT 60.445 45.833 10.93 0.00 0.00 3.59
875 931 4.344359 AAAAGAGCTCCCCTAATCGATC 57.656 45.455 10.93 0.00 0.00 3.69
876 932 2.990740 AGAGCTCCCCTAATCGATCT 57.009 50.000 10.93 0.00 0.00 2.75
877 933 2.802719 AGAGCTCCCCTAATCGATCTC 58.197 52.381 10.93 0.00 0.00 2.75
878 934 1.822371 GAGCTCCCCTAATCGATCTCC 59.178 57.143 0.87 0.00 0.00 3.71
879 935 1.148027 AGCTCCCCTAATCGATCTCCA 59.852 52.381 0.00 0.00 0.00 3.86
880 936 1.548269 GCTCCCCTAATCGATCTCCAG 59.452 57.143 0.00 0.00 0.00 3.86
881 937 2.819726 GCTCCCCTAATCGATCTCCAGA 60.820 54.545 0.00 0.00 0.00 3.86
882 938 3.707316 CTCCCCTAATCGATCTCCAGAT 58.293 50.000 0.00 0.00 37.51 2.90
883 939 4.093011 CTCCCCTAATCGATCTCCAGATT 58.907 47.826 0.00 0.00 39.95 2.40
884 940 3.834813 TCCCCTAATCGATCTCCAGATTG 59.165 47.826 0.00 0.00 37.61 2.67
885 941 3.834813 CCCCTAATCGATCTCCAGATTGA 59.165 47.826 8.67 8.67 45.95 2.57
886 942 4.081752 CCCCTAATCGATCTCCAGATTGAG 60.082 50.000 11.42 0.30 45.32 3.02
887 943 4.769488 CCCTAATCGATCTCCAGATTGAGA 59.231 45.833 11.42 0.00 45.32 3.27
893 949 3.652323 ATCTCCAGATTGAGATCCCCT 57.348 47.619 0.00 0.00 46.66 4.79
894 950 3.428063 TCTCCAGATTGAGATCCCCTT 57.572 47.619 0.00 0.00 36.48 3.95
895 951 3.312890 TCTCCAGATTGAGATCCCCTTC 58.687 50.000 0.00 0.00 36.48 3.46
896 952 3.051496 TCTCCAGATTGAGATCCCCTTCT 60.051 47.826 0.00 0.00 36.48 2.85
897 953 3.715834 CTCCAGATTGAGATCCCCTTCTT 59.284 47.826 0.00 0.00 34.11 2.52
898 954 3.457380 TCCAGATTGAGATCCCCTTCTTG 59.543 47.826 0.00 0.00 32.44 3.02
899 955 3.212685 CAGATTGAGATCCCCTTCTTGC 58.787 50.000 0.00 0.00 32.44 4.01
900 956 3.117963 CAGATTGAGATCCCCTTCTTGCT 60.118 47.826 0.00 0.00 32.44 3.91
910 966 1.001378 CCCTTCTTGCTTTCGTGTTGG 60.001 52.381 0.00 0.00 0.00 3.77
915 971 0.934496 TTGCTTTCGTGTTGGAGACG 59.066 50.000 0.00 0.00 38.20 4.18
917 973 0.599204 GCTTTCGTGTTGGAGACGGA 60.599 55.000 0.00 0.00 37.43 4.69
969 1027 7.780008 ATATACTGGAGTAGAATCGATCGAG 57.220 40.000 23.84 7.97 33.52 4.04
970 1028 4.074627 ACTGGAGTAGAATCGATCGAGA 57.925 45.455 23.84 5.86 0.00 4.04
1116 1186 2.503382 GGAGGAGATGAGGGACGCC 61.503 68.421 0.00 0.00 0.00 5.68
1197 1267 3.454375 CATGGTTACCACCTACGATGTC 58.546 50.000 6.10 0.00 44.61 3.06
1248 1318 3.859414 ATGCAGCGCCTCTCCTCC 61.859 66.667 2.29 0.00 0.00 4.30
1289 1359 5.368989 CCAAGACCCAATCTGGTAACTATC 58.631 45.833 0.00 0.00 39.24 2.08
1290 1360 5.131142 CCAAGACCCAATCTGGTAACTATCT 59.869 44.000 0.00 0.00 39.24 1.98
1291 1361 6.326583 CCAAGACCCAATCTGGTAACTATCTA 59.673 42.308 0.00 0.00 39.24 1.98
1292 1362 7.016661 CCAAGACCCAATCTGGTAACTATCTAT 59.983 40.741 0.00 0.00 39.24 1.98
1337 1407 7.841915 TTATTTCGCATATTGTCTCTTGTCA 57.158 32.000 0.00 0.00 0.00 3.58
1338 1408 6.932356 ATTTCGCATATTGTCTCTTGTCAT 57.068 33.333 0.00 0.00 0.00 3.06
1339 1409 5.723492 TTCGCATATTGTCTCTTGTCATG 57.277 39.130 0.00 0.00 0.00 3.07
1340 1410 4.758688 TCGCATATTGTCTCTTGTCATGT 58.241 39.130 0.00 0.00 0.00 3.21
1341 1411 5.901552 TCGCATATTGTCTCTTGTCATGTA 58.098 37.500 0.00 0.00 0.00 2.29
1343 1413 5.750547 CGCATATTGTCTCTTGTCATGTACT 59.249 40.000 0.00 0.00 0.00 2.73
1344 1414 6.074623 CGCATATTGTCTCTTGTCATGTACTC 60.075 42.308 0.00 0.00 0.00 2.59
1345 1415 6.201806 GCATATTGTCTCTTGTCATGTACTCC 59.798 42.308 0.00 0.00 0.00 3.85
1346 1416 4.537135 TTGTCTCTTGTCATGTACTCCC 57.463 45.455 0.00 0.00 0.00 4.30
1347 1417 3.779444 TGTCTCTTGTCATGTACTCCCT 58.221 45.455 0.00 0.00 0.00 4.20
1348 1418 3.764434 TGTCTCTTGTCATGTACTCCCTC 59.236 47.826 0.00 0.00 0.00 4.30
1349 1419 3.131400 GTCTCTTGTCATGTACTCCCTCC 59.869 52.174 0.00 0.00 0.00 4.30
1352 1422 1.471119 TGTCATGTACTCCCTCCGTC 58.529 55.000 0.00 0.00 0.00 4.79
1353 1423 0.745468 GTCATGTACTCCCTCCGTCC 59.255 60.000 0.00 0.00 0.00 4.79
1354 1424 0.396695 TCATGTACTCCCTCCGTCCC 60.397 60.000 0.00 0.00 0.00 4.46
1355 1425 0.686441 CATGTACTCCCTCCGTCCCA 60.686 60.000 0.00 0.00 0.00 4.37
1356 1426 0.264955 ATGTACTCCCTCCGTCCCAT 59.735 55.000 0.00 0.00 0.00 4.00
1357 1427 0.042131 TGTACTCCCTCCGTCCCATT 59.958 55.000 0.00 0.00 0.00 3.16
1358 1428 0.751452 GTACTCCCTCCGTCCCATTC 59.249 60.000 0.00 0.00 0.00 2.67
1359 1429 0.635009 TACTCCCTCCGTCCCATTCT 59.365 55.000 0.00 0.00 0.00 2.40
1360 1430 0.252742 ACTCCCTCCGTCCCATTCTT 60.253 55.000 0.00 0.00 0.00 2.52
1361 1431 0.179000 CTCCCTCCGTCCCATTCTTG 59.821 60.000 0.00 0.00 0.00 3.02
1362 1432 0.546747 TCCCTCCGTCCCATTCTTGT 60.547 55.000 0.00 0.00 0.00 3.16
1363 1433 0.107654 CCCTCCGTCCCATTCTTGTC 60.108 60.000 0.00 0.00 0.00 3.18
1364 1434 0.905357 CCTCCGTCCCATTCTTGTCT 59.095 55.000 0.00 0.00 0.00 3.41
1365 1435 1.279271 CCTCCGTCCCATTCTTGTCTT 59.721 52.381 0.00 0.00 0.00 3.01
1366 1436 2.500098 CCTCCGTCCCATTCTTGTCTTA 59.500 50.000 0.00 0.00 0.00 2.10
1367 1437 3.430929 CCTCCGTCCCATTCTTGTCTTAG 60.431 52.174 0.00 0.00 0.00 2.18
1368 1438 3.437213 TCCGTCCCATTCTTGTCTTAGA 58.563 45.455 0.00 0.00 0.00 2.10
1369 1439 4.030913 TCCGTCCCATTCTTGTCTTAGAT 58.969 43.478 0.00 0.00 0.00 1.98
1370 1440 4.469945 TCCGTCCCATTCTTGTCTTAGATT 59.530 41.667 0.00 0.00 0.00 2.40
1371 1441 4.811557 CCGTCCCATTCTTGTCTTAGATTC 59.188 45.833 0.00 0.00 0.00 2.52
1372 1442 4.504461 CGTCCCATTCTTGTCTTAGATTCG 59.496 45.833 0.00 0.00 0.00 3.34
1373 1443 5.420409 GTCCCATTCTTGTCTTAGATTCGT 58.580 41.667 0.00 0.00 0.00 3.85
1374 1444 5.520649 GTCCCATTCTTGTCTTAGATTCGTC 59.479 44.000 0.00 0.00 0.00 4.20
1375 1445 5.422331 TCCCATTCTTGTCTTAGATTCGTCT 59.578 40.000 0.00 0.00 0.00 4.18
1376 1446 6.605995 TCCCATTCTTGTCTTAGATTCGTCTA 59.394 38.462 0.00 0.00 0.00 2.59
1377 1447 7.123697 TCCCATTCTTGTCTTAGATTCGTCTAA 59.876 37.037 0.00 0.00 0.00 2.10
1378 1448 7.764443 CCCATTCTTGTCTTAGATTCGTCTAAA 59.236 37.037 0.26 0.00 32.51 1.85
1379 1449 9.319143 CCATTCTTGTCTTAGATTCGTCTAAAT 57.681 33.333 0.26 0.00 32.51 1.40
1382 1452 9.499585 TTCTTGTCTTAGATTCGTCTAAATACG 57.500 33.333 0.26 0.00 44.19 3.06
1383 1453 8.127327 TCTTGTCTTAGATTCGTCTAAATACGG 58.873 37.037 0.00 0.99 43.05 4.02
1384 1454 7.558161 TGTCTTAGATTCGTCTAAATACGGA 57.442 36.000 0.00 0.00 43.05 4.69
1385 1455 8.162878 TGTCTTAGATTCGTCTAAATACGGAT 57.837 34.615 0.00 0.00 43.73 4.18
1386 1456 8.074370 TGTCTTAGATTCGTCTAAATACGGATG 58.926 37.037 0.00 0.00 41.14 3.51
1387 1457 8.074972 GTCTTAGATTCGTCTAAATACGGATGT 58.925 37.037 0.00 0.00 41.14 3.06
1388 1458 9.276590 TCTTAGATTCGTCTAAATACGGATGTA 57.723 33.333 0.00 0.00 41.14 2.29
1391 1461 8.338072 AGATTCGTCTAAATACGGATGTATCT 57.662 34.615 0.00 0.00 41.14 1.98
1392 1462 9.445878 AGATTCGTCTAAATACGGATGTATCTA 57.554 33.333 0.00 0.00 41.14 1.98
1393 1463 9.705471 GATTCGTCTAAATACGGATGTATCTAG 57.295 37.037 0.00 0.00 41.14 2.43
1394 1464 7.606858 TCGTCTAAATACGGATGTATCTAGG 57.393 40.000 0.00 0.00 40.42 3.02
1395 1465 6.093219 TCGTCTAAATACGGATGTATCTAGGC 59.907 42.308 0.00 0.00 40.42 3.93
1396 1466 6.256686 GTCTAAATACGGATGTATCTAGGCG 58.743 44.000 0.00 0.00 40.42 5.52
1397 1467 6.093219 GTCTAAATACGGATGTATCTAGGCGA 59.907 42.308 0.00 0.00 40.42 5.54
1398 1468 5.717078 AAATACGGATGTATCTAGGCGAA 57.283 39.130 0.00 0.00 40.42 4.70
1399 1469 5.916661 AATACGGATGTATCTAGGCGAAT 57.083 39.130 0.00 0.00 40.42 3.34
1407 1477 6.151312 GGATGTATCTAGGCGAATCTAAGACA 59.849 42.308 0.00 0.00 0.00 3.41
1411 1481 6.716934 ATCTAGGCGAATCTAAGACAAAGA 57.283 37.500 0.00 0.00 0.00 2.52
1413 1483 7.113658 TCTAGGCGAATCTAAGACAAAGATT 57.886 36.000 0.00 0.00 44.43 2.40
1414 1484 7.556844 TCTAGGCGAATCTAAGACAAAGATTT 58.443 34.615 0.29 0.00 42.38 2.17
1415 1485 8.041323 TCTAGGCGAATCTAAGACAAAGATTTT 58.959 33.333 0.29 0.00 42.38 1.82
1416 1486 6.846350 AGGCGAATCTAAGACAAAGATTTTG 58.154 36.000 0.29 0.28 42.38 2.44
1417 1487 6.030228 GGCGAATCTAAGACAAAGATTTTGG 58.970 40.000 6.51 0.00 42.38 3.28
1418 1488 6.128007 GGCGAATCTAAGACAAAGATTTTGGA 60.128 38.462 6.51 0.00 42.38 3.53
1419 1489 7.305474 GCGAATCTAAGACAAAGATTTTGGAA 58.695 34.615 6.51 0.00 42.38 3.53
1420 1490 7.271438 GCGAATCTAAGACAAAGATTTTGGAAC 59.729 37.037 6.51 0.00 42.38 3.62
1421 1491 7.478667 CGAATCTAAGACAAAGATTTTGGAACG 59.521 37.037 6.51 0.00 42.38 3.95
1422 1492 6.554334 TCTAAGACAAAGATTTTGGAACGG 57.446 37.500 6.51 0.00 0.00 4.44
1423 1493 6.292923 TCTAAGACAAAGATTTTGGAACGGA 58.707 36.000 6.51 0.00 0.00 4.69
1426 1496 2.890945 ACAAAGATTTTGGAACGGAGGG 59.109 45.455 6.51 0.00 0.00 4.30
1427 1497 3.153919 CAAAGATTTTGGAACGGAGGGA 58.846 45.455 0.00 0.00 0.00 4.20
1428 1498 2.789409 AGATTTTGGAACGGAGGGAG 57.211 50.000 0.00 0.00 0.00 4.30
1429 1499 1.985895 AGATTTTGGAACGGAGGGAGT 59.014 47.619 0.00 0.00 0.00 3.85
1430 1500 3.178865 AGATTTTGGAACGGAGGGAGTA 58.821 45.455 0.00 0.00 0.00 2.59
1431 1501 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
1432 1502 2.019807 TTTGGAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 0.00 2.73
1433 1503 2.019807 TTGGAACGGAGGGAGTACTT 57.980 50.000 0.00 0.00 0.00 2.24
1434 1504 1.263356 TGGAACGGAGGGAGTACTTG 58.737 55.000 0.00 0.00 0.00 3.16
1435 1505 1.264295 GGAACGGAGGGAGTACTTGT 58.736 55.000 0.00 0.00 0.00 3.16
1436 1506 2.225091 TGGAACGGAGGGAGTACTTGTA 60.225 50.000 0.00 0.00 0.00 2.41
1437 1507 3.029570 GGAACGGAGGGAGTACTTGTAT 58.970 50.000 0.00 0.00 0.00 2.29
1438 1508 3.450096 GGAACGGAGGGAGTACTTGTATT 59.550 47.826 0.00 0.00 0.00 1.89
1439 1509 4.430908 GAACGGAGGGAGTACTTGTATTG 58.569 47.826 0.00 0.00 0.00 1.90
1440 1510 2.764572 ACGGAGGGAGTACTTGTATTGG 59.235 50.000 0.00 0.00 0.00 3.16
1441 1511 3.028850 CGGAGGGAGTACTTGTATTGGA 58.971 50.000 0.00 0.00 0.00 3.53
1442 1512 3.181478 CGGAGGGAGTACTTGTATTGGAC 60.181 52.174 0.00 0.00 0.00 4.02
1443 1513 3.181478 GGAGGGAGTACTTGTATTGGACG 60.181 52.174 0.00 0.00 0.00 4.79
1444 1514 3.438183 AGGGAGTACTTGTATTGGACGT 58.562 45.455 0.00 0.00 0.00 4.34
1445 1515 3.836562 AGGGAGTACTTGTATTGGACGTT 59.163 43.478 0.00 0.00 0.00 3.99
1446 1516 4.285260 AGGGAGTACTTGTATTGGACGTTT 59.715 41.667 0.00 0.00 0.00 3.60
1447 1517 4.999311 GGGAGTACTTGTATTGGACGTTTT 59.001 41.667 0.00 0.00 0.00 2.43
1448 1518 5.471116 GGGAGTACTTGTATTGGACGTTTTT 59.529 40.000 0.00 0.00 0.00 1.94
1449 1519 6.368213 GGAGTACTTGTATTGGACGTTTTTG 58.632 40.000 0.00 0.00 0.00 2.44
1450 1520 5.754778 AGTACTTGTATTGGACGTTTTTGC 58.245 37.500 0.00 0.00 0.00 3.68
1451 1521 4.640789 ACTTGTATTGGACGTTTTTGCA 57.359 36.364 0.00 0.00 0.00 4.08
1452 1522 4.606961 ACTTGTATTGGACGTTTTTGCAG 58.393 39.130 0.00 0.00 0.00 4.41
1453 1523 3.006659 TGTATTGGACGTTTTTGCAGC 57.993 42.857 0.00 0.00 0.00 5.25
1454 1524 2.287909 TGTATTGGACGTTTTTGCAGCC 60.288 45.455 0.00 0.00 0.00 4.85
1455 1525 1.039856 ATTGGACGTTTTTGCAGCCT 58.960 45.000 0.00 0.00 0.00 4.58
1456 1526 1.681538 TTGGACGTTTTTGCAGCCTA 58.318 45.000 0.00 0.00 0.00 3.93
1457 1527 1.681538 TGGACGTTTTTGCAGCCTAA 58.318 45.000 0.00 0.00 0.00 2.69
1458 1528 2.235016 TGGACGTTTTTGCAGCCTAAT 58.765 42.857 0.00 0.00 0.00 1.73
1459 1529 2.227865 TGGACGTTTTTGCAGCCTAATC 59.772 45.455 0.00 0.00 0.00 1.75
1460 1530 2.488153 GGACGTTTTTGCAGCCTAATCT 59.512 45.455 0.00 0.00 0.00 2.40
1461 1531 3.057526 GGACGTTTTTGCAGCCTAATCTT 60.058 43.478 0.00 0.00 0.00 2.40
1462 1532 4.155280 GGACGTTTTTGCAGCCTAATCTTA 59.845 41.667 0.00 0.00 0.00 2.10
1463 1533 5.296813 ACGTTTTTGCAGCCTAATCTTAG 57.703 39.130 0.00 0.00 0.00 2.18
1464 1534 4.760204 ACGTTTTTGCAGCCTAATCTTAGT 59.240 37.500 0.00 0.00 0.00 2.24
1465 1535 5.935789 ACGTTTTTGCAGCCTAATCTTAGTA 59.064 36.000 0.00 0.00 0.00 1.82
1466 1536 6.128363 ACGTTTTTGCAGCCTAATCTTAGTAC 60.128 38.462 0.00 0.00 0.00 2.73
1467 1537 6.128391 CGTTTTTGCAGCCTAATCTTAGTACA 60.128 38.462 0.00 0.00 0.00 2.90
1468 1538 7.572353 CGTTTTTGCAGCCTAATCTTAGTACAA 60.572 37.037 0.00 0.00 0.00 2.41
1469 1539 7.938140 TTTTGCAGCCTAATCTTAGTACAAT 57.062 32.000 0.00 0.00 0.00 2.71
1470 1540 7.553881 TTTGCAGCCTAATCTTAGTACAATC 57.446 36.000 0.00 0.00 0.00 2.67
1471 1541 5.611374 TGCAGCCTAATCTTAGTACAATCC 58.389 41.667 0.00 0.00 0.00 3.01
1472 1542 5.130311 TGCAGCCTAATCTTAGTACAATCCA 59.870 40.000 0.00 0.00 0.00 3.41
1473 1543 6.055588 GCAGCCTAATCTTAGTACAATCCAA 58.944 40.000 0.00 0.00 0.00 3.53
1474 1544 6.542370 GCAGCCTAATCTTAGTACAATCCAAA 59.458 38.462 0.00 0.00 0.00 3.28
1512 1582 4.916249 ACTAAGCTACAGAAACGTCTTTCG 59.084 41.667 2.40 0.00 40.79 3.46
1541 1611 8.579850 AGCTACTACAAATCCAATTCATCAAA 57.420 30.769 0.00 0.00 0.00 2.69
1546 1616 8.641541 ACTACAAATCCAATTCATCAAAGTTGT 58.358 29.630 0.00 0.00 0.00 3.32
1548 1618 8.816640 ACAAATCCAATTCATCAAAGTTGTAC 57.183 30.769 0.00 0.00 0.00 2.90
1606 1677 3.786635 TGTATTGTTTTGCAGGCGTTTT 58.213 36.364 0.00 0.00 0.00 2.43
1618 1689 4.183146 CGTTTTTGTCGACGCCAC 57.817 55.556 11.62 4.11 32.11 5.01
1646 1717 7.958053 AGACGCAATACTTACTACAAGTTTT 57.042 32.000 0.00 0.00 0.00 2.43
1661 1732 1.202952 AGTTTTTGGGGGCATGTACGA 60.203 47.619 0.00 0.00 0.00 3.43
1662 1733 1.614413 GTTTTTGGGGGCATGTACGAA 59.386 47.619 0.00 0.00 0.00 3.85
1704 1775 0.884704 ATCGGCTTGCTCGTGTTTGT 60.885 50.000 0.00 0.00 0.00 2.83
1736 1807 3.680786 CTGTCGCGGACTGGTGGA 61.681 66.667 6.13 0.00 33.15 4.02
1741 1812 1.890041 CGCGGACTGGTGGAACAAA 60.890 57.895 0.00 0.00 44.16 2.83
1756 1827 8.212312 TGGTGGAACAAAGTTACTAGTTGAATA 58.788 33.333 0.00 0.00 44.16 1.75
1762 1833 9.623000 AACAAAGTTACTAGTTGAATACACCTT 57.377 29.630 0.00 0.00 0.00 3.50
1766 1837 8.203681 AGTTACTAGTTGAATACACCTTTCCT 57.796 34.615 0.00 0.00 0.00 3.36
1767 1838 8.312564 AGTTACTAGTTGAATACACCTTTCCTC 58.687 37.037 0.00 0.00 0.00 3.71
1768 1839 6.936968 ACTAGTTGAATACACCTTTCCTCT 57.063 37.500 0.00 0.00 0.00 3.69
1769 1840 6.937392 ACTAGTTGAATACACCTTTCCTCTC 58.063 40.000 0.00 0.00 0.00 3.20
1770 1841 5.167303 AGTTGAATACACCTTTCCTCTCC 57.833 43.478 0.00 0.00 0.00 3.71
1771 1842 4.846940 AGTTGAATACACCTTTCCTCTCCT 59.153 41.667 0.00 0.00 0.00 3.69
1773 1844 5.934402 TGAATACACCTTTCCTCTCCTAC 57.066 43.478 0.00 0.00 0.00 3.18
1775 1846 5.422331 TGAATACACCTTTCCTCTCCTACAG 59.578 44.000 0.00 0.00 0.00 2.74
1776 1847 1.903183 ACACCTTTCCTCTCCTACAGC 59.097 52.381 0.00 0.00 0.00 4.40
1778 1849 2.503356 CACCTTTCCTCTCCTACAGCAT 59.497 50.000 0.00 0.00 0.00 3.79
1779 1850 3.706594 CACCTTTCCTCTCCTACAGCATA 59.293 47.826 0.00 0.00 0.00 3.14
1780 1851 3.707102 ACCTTTCCTCTCCTACAGCATAC 59.293 47.826 0.00 0.00 0.00 2.39
1781 1852 3.964031 CCTTTCCTCTCCTACAGCATACT 59.036 47.826 0.00 0.00 0.00 2.12
1782 1853 4.407296 CCTTTCCTCTCCTACAGCATACTT 59.593 45.833 0.00 0.00 0.00 2.24
1783 1854 5.598830 CCTTTCCTCTCCTACAGCATACTTA 59.401 44.000 0.00 0.00 0.00 2.24
1784 1855 6.461788 CCTTTCCTCTCCTACAGCATACTTAC 60.462 46.154 0.00 0.00 0.00 2.34
1785 1856 5.390087 TCCTCTCCTACAGCATACTTACT 57.610 43.478 0.00 0.00 0.00 2.24
1786 1857 6.511017 TCCTCTCCTACAGCATACTTACTA 57.489 41.667 0.00 0.00 0.00 1.82
1788 1859 6.101442 TCCTCTCCTACAGCATACTTACTAGT 59.899 42.308 0.00 0.00 38.44 2.57
1789 1860 6.205853 CCTCTCCTACAGCATACTTACTAGTG 59.794 46.154 5.39 0.00 35.78 2.74
1796 1873 9.587772 CTACAGCATACTTACTAGTGTCAAAAT 57.412 33.333 5.39 0.00 35.78 1.82
1797 1874 8.848474 ACAGCATACTTACTAGTGTCAAAATT 57.152 30.769 5.39 0.00 35.78 1.82
1801 1878 8.237267 GCATACTTACTAGTGTCAAAATTGCTT 58.763 33.333 5.39 0.00 35.78 3.91
1834 1911 7.996098 ATGTTTTTATATTATGGGACGGAGG 57.004 36.000 0.00 0.00 0.00 4.30
1835 1912 6.300703 TGTTTTTATATTATGGGACGGAGGG 58.699 40.000 0.00 0.00 0.00 4.30
1836 1913 6.101442 TGTTTTTATATTATGGGACGGAGGGA 59.899 38.462 0.00 0.00 0.00 4.20
1837 1914 6.368779 TTTTATATTATGGGACGGAGGGAG 57.631 41.667 0.00 0.00 0.00 4.30
1838 1915 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
1839 1916 1.424638 ATTATGGGACGGAGGGAGTG 58.575 55.000 0.00 0.00 0.00 3.51
1840 1917 0.689745 TTATGGGACGGAGGGAGTGG 60.690 60.000 0.00 0.00 0.00 4.00
1843 1920 3.003763 GGACGGAGGGAGTGGCTT 61.004 66.667 0.00 0.00 0.00 4.35
1844 1921 1.684734 GGACGGAGGGAGTGGCTTA 60.685 63.158 0.00 0.00 0.00 3.09
1845 1922 1.049289 GGACGGAGGGAGTGGCTTAT 61.049 60.000 0.00 0.00 0.00 1.73
1846 1923 0.105039 GACGGAGGGAGTGGCTTATG 59.895 60.000 0.00 0.00 0.00 1.90
1847 1924 0.617820 ACGGAGGGAGTGGCTTATGT 60.618 55.000 0.00 0.00 0.00 2.29
1848 1925 0.541863 CGGAGGGAGTGGCTTATGTT 59.458 55.000 0.00 0.00 0.00 2.71
1849 1926 1.760613 CGGAGGGAGTGGCTTATGTTA 59.239 52.381 0.00 0.00 0.00 2.41
1850 1927 2.224066 CGGAGGGAGTGGCTTATGTTAG 60.224 54.545 0.00 0.00 0.00 2.34
1851 1928 2.772515 GGAGGGAGTGGCTTATGTTAGT 59.227 50.000 0.00 0.00 0.00 2.24
1852 1929 3.432326 GGAGGGAGTGGCTTATGTTAGTG 60.432 52.174 0.00 0.00 0.00 2.74
1853 1930 2.092914 AGGGAGTGGCTTATGTTAGTGC 60.093 50.000 0.00 0.00 0.00 4.40
1854 1931 2.289565 GGAGTGGCTTATGTTAGTGCC 58.710 52.381 0.00 0.00 45.10 5.01
1884 1961 5.665459 ACTAGCTTGTCATGAGGATTGTAC 58.335 41.667 0.00 0.00 0.00 2.90
1896 1973 9.539194 TCATGAGGATTGTACTAGTCATCATAT 57.461 33.333 16.50 2.22 42.32 1.78
1925 2002 6.279882 AGCTTAGCTGCTAGTTCTATCTTTG 58.720 40.000 5.70 0.00 42.10 2.77
1927 2004 6.684111 GCTTAGCTGCTAGTTCTATCTTTGGA 60.684 42.308 9.62 0.00 0.00 3.53
1928 2005 5.885449 AGCTGCTAGTTCTATCTTTGGAT 57.115 39.130 0.00 0.00 36.07 3.41
1929 2006 6.245890 AGCTGCTAGTTCTATCTTTGGATT 57.754 37.500 0.00 0.00 33.71 3.01
1930 2007 6.054295 AGCTGCTAGTTCTATCTTTGGATTG 58.946 40.000 0.00 0.00 33.71 2.67
1931 2008 5.238214 GCTGCTAGTTCTATCTTTGGATTGG 59.762 44.000 0.00 0.00 33.71 3.16
1932 2009 6.560003 TGCTAGTTCTATCTTTGGATTGGA 57.440 37.500 0.00 0.00 33.71 3.53
1933 2010 6.349300 TGCTAGTTCTATCTTTGGATTGGAC 58.651 40.000 0.00 0.00 34.75 4.02
1934 2011 5.463724 GCTAGTTCTATCTTTGGATTGGACG 59.536 44.000 0.00 0.00 37.94 4.79
1949 2026 5.187967 GGATTGGACGGTCTATCCATCTTAT 59.812 44.000 24.83 4.90 45.71 1.73
1981 2077 6.717289 TGTAAGCCTATGTTTCTTGTATGGT 58.283 36.000 0.00 0.00 0.00 3.55
1994 2090 1.134521 TGTATGGTCTTTGCCCGCTAG 60.135 52.381 0.00 0.00 0.00 3.42
1998 2094 0.810426 GGTCTTTGCCCGCTAGCTAC 60.810 60.000 13.93 2.25 0.00 3.58
1999 2095 0.108329 GTCTTTGCCCGCTAGCTACA 60.108 55.000 13.93 5.11 0.00 2.74
2000 2096 0.830648 TCTTTGCCCGCTAGCTACAT 59.169 50.000 13.93 0.00 0.00 2.29
2001 2097 2.036387 TCTTTGCCCGCTAGCTACATA 58.964 47.619 13.93 2.69 0.00 2.29
2002 2098 2.432874 TCTTTGCCCGCTAGCTACATAA 59.567 45.455 13.93 1.02 0.00 1.90
2003 2099 2.526304 TTGCCCGCTAGCTACATAAG 57.474 50.000 13.93 0.00 0.00 1.73
2022 2118 7.688372 ACATAAGCTCTTTCGAACACATATTG 58.312 34.615 0.00 0.00 0.00 1.90
2052 2148 2.486982 CGGCATGATCATCATCTTTCCC 59.513 50.000 4.86 0.00 34.28 3.97
2069 2165 4.181010 CCCCTGCCGGTCCATCTG 62.181 72.222 1.90 0.00 0.00 2.90
2070 2166 4.181010 CCCTGCCGGTCCATCTGG 62.181 72.222 1.90 0.00 45.06 3.86
2071 2167 4.181010 CCTGCCGGTCCATCTGGG 62.181 72.222 1.90 0.00 42.62 4.45
2073 2169 3.391665 CTGCCGGTCCATCTGGGTC 62.392 68.421 1.90 0.00 42.62 4.46
2074 2170 3.399181 GCCGGTCCATCTGGGTCA 61.399 66.667 1.90 0.00 42.62 4.02
2076 2172 1.146930 CCGGTCCATCTGGGTCATG 59.853 63.158 0.00 0.00 38.86 3.07
2078 2174 1.626356 CGGTCCATCTGGGTCATGGT 61.626 60.000 0.00 0.00 41.59 3.55
2079 2175 0.181350 GGTCCATCTGGGTCATGGTC 59.819 60.000 0.00 0.00 41.59 4.02
2080 2176 0.179073 GTCCATCTGGGTCATGGTCG 60.179 60.000 0.00 0.00 41.59 4.79
2081 2177 1.146930 CCATCTGGGTCATGGTCGG 59.853 63.158 0.00 0.00 36.74 4.79
2082 2178 1.626356 CCATCTGGGTCATGGTCGGT 61.626 60.000 0.00 0.00 36.74 4.69
2083 2179 0.462581 CATCTGGGTCATGGTCGGTG 60.463 60.000 0.00 0.00 0.00 4.94
2139 2548 1.169577 TCTGTCCGTGAAGCTCTCTC 58.830 55.000 0.00 0.00 0.00 3.20
2157 2567 2.037902 TCTCGGACACAAATGCCTAACA 59.962 45.455 0.00 0.00 0.00 2.41
2158 2568 2.147958 TCGGACACAAATGCCTAACAC 58.852 47.619 0.00 0.00 0.00 3.32
2167 2587 4.518970 ACAAATGCCTAACACGAGTTCATT 59.481 37.500 0.18 3.62 39.15 2.57
2174 2594 5.179555 GCCTAACACGAGTTCATTCTTCTTT 59.820 40.000 0.18 0.00 39.15 2.52
2210 2630 2.557924 TGACAATGCAACACCTTCATCC 59.442 45.455 0.00 0.00 0.00 3.51
2230 2650 3.326006 TCCTGCTCTTGAGTCTTTGTGAT 59.674 43.478 0.00 0.00 0.00 3.06
2231 2651 4.528206 TCCTGCTCTTGAGTCTTTGTGATA 59.472 41.667 0.00 0.00 0.00 2.15
2256 2676 0.323629 TTCATGAGGTGGTTCCGACC 59.676 55.000 0.00 0.00 46.71 4.79
2308 2728 1.071071 CAGGTCGGTTTACAAGGTCCA 59.929 52.381 0.00 0.00 0.00 4.02
2345 2766 4.084328 CGCAATAGCTATACCAAGTGCTTC 60.084 45.833 18.74 0.00 39.10 3.86
2358 2779 7.875327 ACCAAGTGCTTCGGTAAATTAATAT 57.125 32.000 0.00 0.00 0.00 1.28
2413 2834 9.650539 ATCTTGATGATATCACTAACAGTATGC 57.349 33.333 7.78 0.00 38.41 3.14
2454 2875 6.464222 TGTAAATATGGAGGTGCATACTAGC 58.536 40.000 0.00 0.00 0.00 3.42
2459 2880 2.632996 TGGAGGTGCATACTAGCCATAC 59.367 50.000 0.00 0.00 0.00 2.39
2477 2898 7.344134 AGCCATACAACATGCATATCTATGAT 58.656 34.615 0.00 0.00 35.75 2.45
2478 2899 7.282450 AGCCATACAACATGCATATCTATGATG 59.718 37.037 0.00 0.00 35.75 3.07
2479 2900 7.281549 GCCATACAACATGCATATCTATGATGA 59.718 37.037 0.00 0.00 35.75 2.92
2559 2980 4.285003 TCCCTTTTCTGGTTCGATGAACTA 59.715 41.667 9.32 2.90 41.70 2.24
2749 3172 8.542953 GCAAATTCGATATTCTTTTCCCAAATC 58.457 33.333 0.00 0.00 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
251 282 5.879777 CCAAAAAGTTCACCAACCTTTCAAT 59.120 36.000 0.00 0.00 32.22 2.57
301 333 9.130661 TCATCAAATTTGAAAAGGAGTTCACTA 57.869 29.630 23.91 0.00 41.13 2.74
600 653 2.937469 TATCAAACAATTGGCTGCCG 57.063 45.000 14.98 1.58 37.15 5.69
601 654 6.372381 AGAAAAATATCAAACAATTGGCTGCC 59.628 34.615 12.87 12.87 37.15 4.85
602 655 7.368480 AGAAAAATATCAAACAATTGGCTGC 57.632 32.000 10.83 0.00 37.15 5.25
603 656 7.669098 CGAGAAAAATATCAAACAATTGGCTG 58.331 34.615 10.83 6.55 37.15 4.85
604 657 6.311200 GCGAGAAAAATATCAAACAATTGGCT 59.689 34.615 10.83 0.00 37.15 4.75
605 658 6.469322 GCGAGAAAAATATCAAACAATTGGC 58.531 36.000 10.83 0.00 37.15 4.52
606 659 6.685767 CGCGAGAAAAATATCAAACAATTGG 58.314 36.000 10.83 0.00 37.15 3.16
619 672 6.033513 GCAAAAAGTAATAGCGCGAGAAAAAT 59.966 34.615 12.10 0.00 0.00 1.82
732 788 1.134220 AGTCCACTTCGGCAGTTTTCA 60.134 47.619 0.00 0.00 30.92 2.69
733 789 1.264288 CAGTCCACTTCGGCAGTTTTC 59.736 52.381 0.00 0.00 30.92 2.29
734 790 1.308998 CAGTCCACTTCGGCAGTTTT 58.691 50.000 0.00 0.00 30.92 2.43
735 791 0.180406 ACAGTCCACTTCGGCAGTTT 59.820 50.000 0.00 0.00 30.92 2.66
736 792 0.532862 CACAGTCCACTTCGGCAGTT 60.533 55.000 0.00 0.00 30.92 3.16
737 793 1.069765 CACAGTCCACTTCGGCAGT 59.930 57.895 0.00 0.00 35.35 4.40
738 794 0.317160 TACACAGTCCACTTCGGCAG 59.683 55.000 0.00 0.00 33.14 4.85
739 795 0.032952 GTACACAGTCCACTTCGGCA 59.967 55.000 0.00 0.00 33.14 5.69
740 796 1.007336 CGTACACAGTCCACTTCGGC 61.007 60.000 0.00 0.00 33.14 5.54
741 797 0.313043 ACGTACACAGTCCACTTCGG 59.687 55.000 0.00 0.00 0.00 4.30
742 798 1.405461 CACGTACACAGTCCACTTCG 58.595 55.000 0.00 0.00 0.00 3.79
743 799 1.604693 CCCACGTACACAGTCCACTTC 60.605 57.143 0.00 0.00 0.00 3.01
744 800 0.391597 CCCACGTACACAGTCCACTT 59.608 55.000 0.00 0.00 0.00 3.16
745 801 2.046938 CCCACGTACACAGTCCACT 58.953 57.895 0.00 0.00 0.00 4.00
746 802 1.666872 GCCCACGTACACAGTCCAC 60.667 63.158 0.00 0.00 0.00 4.02
747 803 1.835267 AGCCCACGTACACAGTCCA 60.835 57.895 0.00 0.00 0.00 4.02
748 804 1.374252 CAGCCCACGTACACAGTCC 60.374 63.158 0.00 0.00 0.00 3.85
749 805 1.374252 CCAGCCCACGTACACAGTC 60.374 63.158 0.00 0.00 0.00 3.51
750 806 2.741092 CCAGCCCACGTACACAGT 59.259 61.111 0.00 0.00 0.00 3.55
751 807 2.047274 CCCAGCCCACGTACACAG 60.047 66.667 0.00 0.00 0.00 3.66
752 808 4.323477 GCCCAGCCCACGTACACA 62.323 66.667 0.00 0.00 0.00 3.72
763 819 4.666253 TCCAGCACAAGGCCCAGC 62.666 66.667 0.00 0.00 46.50 4.85
764 820 1.841302 TACTCCAGCACAAGGCCCAG 61.841 60.000 0.00 0.00 46.50 4.45
765 821 1.207488 ATACTCCAGCACAAGGCCCA 61.207 55.000 0.00 0.00 46.50 5.36
766 822 0.837272 TATACTCCAGCACAAGGCCC 59.163 55.000 0.00 0.00 46.50 5.80
767 823 2.938956 ATATACTCCAGCACAAGGCC 57.061 50.000 0.00 0.00 46.50 5.19
768 824 3.325135 AGGTATATACTCCAGCACAAGGC 59.675 47.826 12.54 0.00 45.30 4.35
769 825 4.262635 CCAGGTATATACTCCAGCACAAGG 60.263 50.000 12.54 0.00 0.00 3.61
770 826 4.262635 CCCAGGTATATACTCCAGCACAAG 60.263 50.000 12.54 0.00 0.00 3.16
771 827 3.646162 CCCAGGTATATACTCCAGCACAA 59.354 47.826 12.54 0.00 0.00 3.33
772 828 3.239449 CCCAGGTATATACTCCAGCACA 58.761 50.000 12.54 0.00 0.00 4.57
773 829 2.567615 CCCCAGGTATATACTCCAGCAC 59.432 54.545 12.54 0.00 0.00 4.40
774 830 2.902608 CCCCAGGTATATACTCCAGCA 58.097 52.381 12.54 0.00 0.00 4.41
775 831 1.555533 GCCCCAGGTATATACTCCAGC 59.444 57.143 12.54 6.33 0.00 4.85
776 832 1.825474 CGCCCCAGGTATATACTCCAG 59.175 57.143 12.54 0.68 0.00 3.86
777 833 1.430075 TCGCCCCAGGTATATACTCCA 59.570 52.381 12.54 0.00 0.00 3.86
778 834 2.100989 CTCGCCCCAGGTATATACTCC 58.899 57.143 12.54 0.00 0.00 3.85
779 835 1.477295 GCTCGCCCCAGGTATATACTC 59.523 57.143 12.54 3.44 0.00 2.59
780 836 1.558233 GCTCGCCCCAGGTATATACT 58.442 55.000 12.54 0.00 0.00 2.12
781 837 0.172803 CGCTCGCCCCAGGTATATAC 59.827 60.000 4.14 4.14 0.00 1.47
782 838 0.038599 TCGCTCGCCCCAGGTATATA 59.961 55.000 0.00 0.00 0.00 0.86
783 839 1.228769 TCGCTCGCCCCAGGTATAT 60.229 57.895 0.00 0.00 0.00 0.86
784 840 1.901948 CTCGCTCGCCCCAGGTATA 60.902 63.158 0.00 0.00 0.00 1.47
785 841 3.227276 CTCGCTCGCCCCAGGTAT 61.227 66.667 0.00 0.00 0.00 2.73
793 849 4.760047 TTCCCTTGCTCGCTCGCC 62.760 66.667 0.00 0.00 0.00 5.54
794 850 1.852067 TTTTTCCCTTGCTCGCTCGC 61.852 55.000 0.00 0.00 0.00 5.03
795 851 0.166814 CTTTTTCCCTTGCTCGCTCG 59.833 55.000 0.00 0.00 0.00 5.03
796 852 1.466558 CTCTTTTTCCCTTGCTCGCTC 59.533 52.381 0.00 0.00 0.00 5.03
797 853 1.528129 CTCTTTTTCCCTTGCTCGCT 58.472 50.000 0.00 0.00 0.00 4.93
798 854 0.109551 GCTCTTTTTCCCTTGCTCGC 60.110 55.000 0.00 0.00 0.00 5.03
799 855 1.528129 AGCTCTTTTTCCCTTGCTCG 58.472 50.000 0.00 0.00 0.00 5.03
800 856 3.068732 ACAAAGCTCTTTTTCCCTTGCTC 59.931 43.478 0.00 0.00 0.00 4.26
801 857 3.033909 ACAAAGCTCTTTTTCCCTTGCT 58.966 40.909 0.00 0.00 0.00 3.91
802 858 3.126073 CACAAAGCTCTTTTTCCCTTGC 58.874 45.455 0.00 0.00 0.00 4.01
803 859 4.391405 ACACAAAGCTCTTTTTCCCTTG 57.609 40.909 0.00 0.00 0.00 3.61
804 860 4.440112 CGAACACAAAGCTCTTTTTCCCTT 60.440 41.667 0.00 0.00 0.00 3.95
805 861 3.066760 CGAACACAAAGCTCTTTTTCCCT 59.933 43.478 0.00 0.00 0.00 4.20
806 862 3.181490 ACGAACACAAAGCTCTTTTTCCC 60.181 43.478 0.00 0.00 0.00 3.97
807 863 3.791353 CACGAACACAAAGCTCTTTTTCC 59.209 43.478 0.00 0.00 0.00 3.13
808 864 4.412207 ACACGAACACAAAGCTCTTTTTC 58.588 39.130 0.00 0.00 0.00 2.29
809 865 4.434713 ACACGAACACAAAGCTCTTTTT 57.565 36.364 0.00 0.00 0.00 1.94
810 866 4.873827 TCTACACGAACACAAAGCTCTTTT 59.126 37.500 0.00 0.00 0.00 2.27
811 867 4.270325 GTCTACACGAACACAAAGCTCTTT 59.730 41.667 0.00 0.00 0.00 2.52
812 868 3.802685 GTCTACACGAACACAAAGCTCTT 59.197 43.478 0.00 0.00 0.00 2.85
813 869 3.068307 AGTCTACACGAACACAAAGCTCT 59.932 43.478 0.00 0.00 0.00 4.09
814 870 3.381949 AGTCTACACGAACACAAAGCTC 58.618 45.455 0.00 0.00 0.00 4.09
815 871 3.454371 AGTCTACACGAACACAAAGCT 57.546 42.857 0.00 0.00 0.00 3.74
816 872 5.646467 TTTAGTCTACACGAACACAAAGC 57.354 39.130 0.00 0.00 0.00 3.51
840 896 6.349300 GGAGCTCTTTTTCCTTTTCCTTTTT 58.651 36.000 14.64 0.00 0.00 1.94
841 897 5.163301 GGGAGCTCTTTTTCCTTTTCCTTTT 60.163 40.000 14.64 0.00 33.85 2.27
842 898 4.345257 GGGAGCTCTTTTTCCTTTTCCTTT 59.655 41.667 14.64 0.00 33.85 3.11
843 899 3.898123 GGGAGCTCTTTTTCCTTTTCCTT 59.102 43.478 14.64 0.00 33.85 3.36
844 900 3.501349 GGGAGCTCTTTTTCCTTTTCCT 58.499 45.455 14.64 0.00 33.85 3.36
845 901 2.563179 GGGGAGCTCTTTTTCCTTTTCC 59.437 50.000 14.64 1.00 33.85 3.13
846 902 3.501349 AGGGGAGCTCTTTTTCCTTTTC 58.499 45.455 14.64 0.00 33.85 2.29
847 903 3.619900 AGGGGAGCTCTTTTTCCTTTT 57.380 42.857 14.64 0.00 33.85 2.27
848 904 4.741928 TTAGGGGAGCTCTTTTTCCTTT 57.258 40.909 14.64 1.83 33.85 3.11
849 905 4.626529 CGATTAGGGGAGCTCTTTTTCCTT 60.627 45.833 14.64 4.74 33.85 3.36
850 906 3.118223 CGATTAGGGGAGCTCTTTTTCCT 60.118 47.826 14.64 14.25 33.85 3.36
851 907 3.118371 TCGATTAGGGGAGCTCTTTTTCC 60.118 47.826 14.64 5.49 0.00 3.13
852 908 4.138487 TCGATTAGGGGAGCTCTTTTTC 57.862 45.455 14.64 3.13 0.00 2.29
853 909 4.410555 AGATCGATTAGGGGAGCTCTTTTT 59.589 41.667 14.64 0.00 0.00 1.94
854 910 3.970640 AGATCGATTAGGGGAGCTCTTTT 59.029 43.478 14.64 1.68 0.00 2.27
855 911 3.576550 GAGATCGATTAGGGGAGCTCTTT 59.423 47.826 14.64 2.06 41.28 2.52
856 912 3.161866 GAGATCGATTAGGGGAGCTCTT 58.838 50.000 14.64 2.43 41.28 2.85
857 913 2.556559 GGAGATCGATTAGGGGAGCTCT 60.557 54.545 14.64 0.00 43.37 4.09
858 914 1.822371 GGAGATCGATTAGGGGAGCTC 59.178 57.143 4.71 4.71 43.17 4.09
859 915 1.148027 TGGAGATCGATTAGGGGAGCT 59.852 52.381 0.00 0.00 0.00 4.09
860 916 1.548269 CTGGAGATCGATTAGGGGAGC 59.452 57.143 0.00 0.00 0.00 4.70
861 917 3.162147 TCTGGAGATCGATTAGGGGAG 57.838 52.381 0.00 0.00 0.00 4.30
862 918 3.834813 CAATCTGGAGATCGATTAGGGGA 59.165 47.826 0.00 0.00 32.75 4.81
863 919 3.834813 TCAATCTGGAGATCGATTAGGGG 59.165 47.826 0.00 0.00 32.75 4.79
864 920 4.769488 TCTCAATCTGGAGATCGATTAGGG 59.231 45.833 0.00 0.00 38.95 3.53
865 921 5.973899 TCTCAATCTGGAGATCGATTAGG 57.026 43.478 0.00 0.00 38.95 2.69
875 931 3.316501 AGAAGGGGATCTCAATCTGGAG 58.683 50.000 0.00 0.00 36.21 3.86
876 932 3.428063 AGAAGGGGATCTCAATCTGGA 57.572 47.619 0.00 0.00 32.12 3.86
877 933 3.818180 CAAGAAGGGGATCTCAATCTGG 58.182 50.000 0.00 0.00 32.12 3.86
878 934 3.117963 AGCAAGAAGGGGATCTCAATCTG 60.118 47.826 0.00 0.00 32.12 2.90
879 935 3.121688 AGCAAGAAGGGGATCTCAATCT 58.878 45.455 0.00 0.00 32.12 2.40
880 936 3.574354 AGCAAGAAGGGGATCTCAATC 57.426 47.619 0.00 0.00 0.00 2.67
881 937 4.276642 GAAAGCAAGAAGGGGATCTCAAT 58.723 43.478 0.00 0.00 0.00 2.57
882 938 3.690460 GAAAGCAAGAAGGGGATCTCAA 58.310 45.455 0.00 0.00 0.00 3.02
883 939 2.355108 CGAAAGCAAGAAGGGGATCTCA 60.355 50.000 0.00 0.00 0.00 3.27
884 940 2.284190 CGAAAGCAAGAAGGGGATCTC 58.716 52.381 0.00 0.00 0.00 2.75
885 941 1.630878 ACGAAAGCAAGAAGGGGATCT 59.369 47.619 0.00 0.00 0.00 2.75
886 942 1.740025 CACGAAAGCAAGAAGGGGATC 59.260 52.381 0.00 0.00 0.00 3.36
887 943 1.073923 ACACGAAAGCAAGAAGGGGAT 59.926 47.619 0.00 0.00 0.00 3.85
888 944 0.472471 ACACGAAAGCAAGAAGGGGA 59.528 50.000 0.00 0.00 0.00 4.81
889 945 1.001378 CAACACGAAAGCAAGAAGGGG 60.001 52.381 0.00 0.00 0.00 4.79
890 946 1.001378 CCAACACGAAAGCAAGAAGGG 60.001 52.381 0.00 0.00 0.00 3.95
891 947 1.946768 TCCAACACGAAAGCAAGAAGG 59.053 47.619 0.00 0.00 0.00 3.46
892 948 2.872245 TCTCCAACACGAAAGCAAGAAG 59.128 45.455 0.00 0.00 0.00 2.85
893 949 2.612212 GTCTCCAACACGAAAGCAAGAA 59.388 45.455 0.00 0.00 0.00 2.52
894 950 2.210116 GTCTCCAACACGAAAGCAAGA 58.790 47.619 0.00 0.00 0.00 3.02
895 951 1.070577 CGTCTCCAACACGAAAGCAAG 60.071 52.381 0.00 0.00 39.75 4.01
896 952 0.934496 CGTCTCCAACACGAAAGCAA 59.066 50.000 0.00 0.00 39.75 3.91
897 953 0.878523 CCGTCTCCAACACGAAAGCA 60.879 55.000 0.00 0.00 39.75 3.91
898 954 0.599204 TCCGTCTCCAACACGAAAGC 60.599 55.000 0.00 0.00 39.75 3.51
899 955 1.860676 TTCCGTCTCCAACACGAAAG 58.139 50.000 0.00 0.00 39.75 2.62
900 956 1.935199 GTTTCCGTCTCCAACACGAAA 59.065 47.619 0.00 0.00 39.75 3.46
910 966 2.727684 GCGCCTTCGTTTCCGTCTC 61.728 63.158 0.00 0.00 38.14 3.36
915 971 3.125573 GGAGGCGCCTTCGTTTCC 61.126 66.667 33.34 22.53 38.14 3.13
917 973 3.607370 GAGGGAGGCGCCTTCGTTT 62.607 63.158 33.34 17.86 32.59 3.60
927 983 6.265196 CAGTATATATCAGATCAGAGGGAGGC 59.735 46.154 0.00 0.00 0.00 4.70
966 1024 1.617357 TGATGCCTGATGATCCTCTCG 59.383 52.381 0.00 0.00 0.00 4.04
969 1027 3.139850 CACTTGATGCCTGATGATCCTC 58.860 50.000 0.00 0.00 0.00 3.71
970 1028 2.775960 TCACTTGATGCCTGATGATCCT 59.224 45.455 0.00 0.00 0.00 3.24
979 1037 2.300152 TCGACTTCTTCACTTGATGCCT 59.700 45.455 0.00 0.00 0.00 4.75
1140 1210 0.251077 ACAGCTCCTCTTTGGCCTTG 60.251 55.000 3.32 0.00 35.26 3.61
1141 1211 0.480252 AACAGCTCCTCTTTGGCCTT 59.520 50.000 3.32 0.00 35.26 4.35
1248 1318 1.638589 TGGGGTCTAGGGTTGATTTGG 59.361 52.381 0.00 0.00 0.00 3.28
1315 1385 6.317140 ACATGACAAGAGACAATATGCGAAAT 59.683 34.615 0.00 0.00 0.00 2.17
1316 1386 5.643348 ACATGACAAGAGACAATATGCGAAA 59.357 36.000 0.00 0.00 0.00 3.46
1317 1387 5.178061 ACATGACAAGAGACAATATGCGAA 58.822 37.500 0.00 0.00 0.00 4.70
1329 1399 2.099921 CGGAGGGAGTACATGACAAGAG 59.900 54.545 0.00 0.00 0.00 2.85
1331 1401 1.825474 ACGGAGGGAGTACATGACAAG 59.175 52.381 0.00 0.00 0.00 3.16
1334 1404 0.745468 GGACGGAGGGAGTACATGAC 59.255 60.000 0.00 0.00 0.00 3.06
1336 1406 0.686441 TGGGACGGAGGGAGTACATG 60.686 60.000 0.00 0.00 0.00 3.21
1337 1407 0.264955 ATGGGACGGAGGGAGTACAT 59.735 55.000 0.00 0.00 0.00 2.29
1338 1408 0.042131 AATGGGACGGAGGGAGTACA 59.958 55.000 0.00 0.00 0.00 2.90
1339 1409 0.751452 GAATGGGACGGAGGGAGTAC 59.249 60.000 0.00 0.00 0.00 2.73
1340 1410 0.635009 AGAATGGGACGGAGGGAGTA 59.365 55.000 0.00 0.00 0.00 2.59
1341 1411 0.252742 AAGAATGGGACGGAGGGAGT 60.253 55.000 0.00 0.00 0.00 3.85
1343 1413 0.546747 ACAAGAATGGGACGGAGGGA 60.547 55.000 0.00 0.00 0.00 4.20
1344 1414 0.107654 GACAAGAATGGGACGGAGGG 60.108 60.000 0.00 0.00 0.00 4.30
1345 1415 0.905357 AGACAAGAATGGGACGGAGG 59.095 55.000 0.00 0.00 0.00 4.30
1346 1416 2.770164 AAGACAAGAATGGGACGGAG 57.230 50.000 0.00 0.00 0.00 4.63
1347 1417 3.437213 TCTAAGACAAGAATGGGACGGA 58.563 45.455 0.00 0.00 0.00 4.69
1348 1418 3.887621 TCTAAGACAAGAATGGGACGG 57.112 47.619 0.00 0.00 0.00 4.79
1349 1419 4.504461 CGAATCTAAGACAAGAATGGGACG 59.496 45.833 0.00 0.00 0.00 4.79
1352 1422 5.665459 AGACGAATCTAAGACAAGAATGGG 58.335 41.667 0.00 0.00 31.46 4.00
1353 1423 8.703604 TTTAGACGAATCTAAGACAAGAATGG 57.296 34.615 0.00 0.00 45.93 3.16
1356 1426 9.499585 CGTATTTAGACGAATCTAAGACAAGAA 57.500 33.333 0.00 0.00 45.93 2.52
1357 1427 8.127327 CCGTATTTAGACGAATCTAAGACAAGA 58.873 37.037 0.00 0.00 45.93 3.02
1358 1428 8.127327 TCCGTATTTAGACGAATCTAAGACAAG 58.873 37.037 0.00 0.00 45.93 3.16
1359 1429 7.988737 TCCGTATTTAGACGAATCTAAGACAA 58.011 34.615 0.00 0.00 45.93 3.18
1360 1430 7.558161 TCCGTATTTAGACGAATCTAAGACA 57.442 36.000 0.00 0.00 45.93 3.41
1361 1431 8.074972 ACATCCGTATTTAGACGAATCTAAGAC 58.925 37.037 0.00 0.00 45.93 3.01
1362 1432 8.162878 ACATCCGTATTTAGACGAATCTAAGA 57.837 34.615 0.00 0.00 45.93 2.10
1365 1435 9.445878 AGATACATCCGTATTTAGACGAATCTA 57.554 33.333 0.00 0.00 45.82 1.98
1366 1436 8.338072 AGATACATCCGTATTTAGACGAATCT 57.662 34.615 0.00 0.00 45.82 2.40
1367 1437 9.705471 CTAGATACATCCGTATTTAGACGAATC 57.295 37.037 0.00 0.00 45.82 2.52
1368 1438 8.675504 CCTAGATACATCCGTATTTAGACGAAT 58.324 37.037 10.26 0.00 45.82 3.34
1369 1439 7.361542 GCCTAGATACATCCGTATTTAGACGAA 60.362 40.741 10.26 0.00 45.82 3.85
1370 1440 6.093219 GCCTAGATACATCCGTATTTAGACGA 59.907 42.308 10.26 0.00 45.82 4.20
1371 1441 6.256686 GCCTAGATACATCCGTATTTAGACG 58.743 44.000 10.26 0.00 41.85 4.18
1372 1442 6.093219 TCGCCTAGATACATCCGTATTTAGAC 59.907 42.308 10.26 1.02 41.85 2.59
1373 1443 6.175471 TCGCCTAGATACATCCGTATTTAGA 58.825 40.000 10.26 0.00 41.85 2.10
1374 1444 6.432607 TCGCCTAGATACATCCGTATTTAG 57.567 41.667 0.00 0.00 40.24 1.85
1375 1445 6.822667 TTCGCCTAGATACATCCGTATTTA 57.177 37.500 0.00 0.00 38.48 1.40
1376 1446 5.717078 TTCGCCTAGATACATCCGTATTT 57.283 39.130 0.00 0.00 38.48 1.40
1377 1447 5.652891 AGATTCGCCTAGATACATCCGTATT 59.347 40.000 0.00 0.00 38.48 1.89
1378 1448 5.194432 AGATTCGCCTAGATACATCCGTAT 58.806 41.667 0.00 0.00 41.16 3.06
1379 1449 4.586884 AGATTCGCCTAGATACATCCGTA 58.413 43.478 0.00 0.00 0.00 4.02
1380 1450 3.422796 AGATTCGCCTAGATACATCCGT 58.577 45.455 0.00 0.00 0.00 4.69
1381 1451 5.354513 TCTTAGATTCGCCTAGATACATCCG 59.645 44.000 0.00 0.00 0.00 4.18
1382 1452 6.151312 TGTCTTAGATTCGCCTAGATACATCC 59.849 42.308 0.00 0.00 0.00 3.51
1383 1453 7.147143 TGTCTTAGATTCGCCTAGATACATC 57.853 40.000 0.00 0.00 0.00 3.06
1384 1454 7.526142 TTGTCTTAGATTCGCCTAGATACAT 57.474 36.000 0.00 0.00 0.00 2.29
1385 1455 6.954487 TTGTCTTAGATTCGCCTAGATACA 57.046 37.500 0.00 0.00 0.00 2.29
1386 1456 7.649973 TCTTTGTCTTAGATTCGCCTAGATAC 58.350 38.462 0.00 0.00 0.00 2.24
1387 1457 7.818997 TCTTTGTCTTAGATTCGCCTAGATA 57.181 36.000 0.00 0.00 0.00 1.98
1388 1458 6.716934 TCTTTGTCTTAGATTCGCCTAGAT 57.283 37.500 0.00 0.00 0.00 1.98
1389 1459 6.716934 ATCTTTGTCTTAGATTCGCCTAGA 57.283 37.500 0.00 0.00 0.00 2.43
1390 1460 7.778470 AAATCTTTGTCTTAGATTCGCCTAG 57.222 36.000 0.00 0.00 40.51 3.02
1391 1461 7.065803 CCAAAATCTTTGTCTTAGATTCGCCTA 59.934 37.037 0.00 0.00 40.51 3.93
1392 1462 6.127897 CCAAAATCTTTGTCTTAGATTCGCCT 60.128 38.462 0.00 0.00 40.51 5.52
1393 1463 6.030228 CCAAAATCTTTGTCTTAGATTCGCC 58.970 40.000 0.00 0.00 40.51 5.54
1394 1464 6.842163 TCCAAAATCTTTGTCTTAGATTCGC 58.158 36.000 0.00 0.00 40.51 4.70
1395 1465 7.478667 CGTTCCAAAATCTTTGTCTTAGATTCG 59.521 37.037 0.00 0.00 40.51 3.34
1396 1466 7.750903 CCGTTCCAAAATCTTTGTCTTAGATTC 59.249 37.037 0.00 0.00 40.51 2.52
1397 1467 7.447238 TCCGTTCCAAAATCTTTGTCTTAGATT 59.553 33.333 0.00 0.00 42.58 2.40
1398 1468 6.940298 TCCGTTCCAAAATCTTTGTCTTAGAT 59.060 34.615 0.00 0.00 33.87 1.98
1399 1469 6.292923 TCCGTTCCAAAATCTTTGTCTTAGA 58.707 36.000 0.00 0.00 0.00 2.10
1407 1477 3.181433 ACTCCCTCCGTTCCAAAATCTTT 60.181 43.478 0.00 0.00 0.00 2.52
1411 1481 2.910977 AGTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
1413 1483 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
1414 1484 1.621814 CAAGTACTCCCTCCGTTCCAA 59.378 52.381 0.00 0.00 0.00 3.53
1415 1485 1.263356 CAAGTACTCCCTCCGTTCCA 58.737 55.000 0.00 0.00 0.00 3.53
1416 1486 1.264295 ACAAGTACTCCCTCCGTTCC 58.736 55.000 0.00 0.00 0.00 3.62
1417 1487 4.430908 CAATACAAGTACTCCCTCCGTTC 58.569 47.826 0.00 0.00 0.00 3.95
1418 1488 3.197116 CCAATACAAGTACTCCCTCCGTT 59.803 47.826 0.00 0.00 0.00 4.44
1419 1489 2.764572 CCAATACAAGTACTCCCTCCGT 59.235 50.000 0.00 0.00 0.00 4.69
1420 1490 3.028850 TCCAATACAAGTACTCCCTCCG 58.971 50.000 0.00 0.00 0.00 4.63
1421 1491 3.181478 CGTCCAATACAAGTACTCCCTCC 60.181 52.174 0.00 0.00 0.00 4.30
1422 1492 3.446516 ACGTCCAATACAAGTACTCCCTC 59.553 47.826 0.00 0.00 0.00 4.30
1423 1493 3.438183 ACGTCCAATACAAGTACTCCCT 58.562 45.455 0.00 0.00 0.00 4.20
1426 1496 5.849604 GCAAAAACGTCCAATACAAGTACTC 59.150 40.000 0.00 0.00 0.00 2.59
1427 1497 5.297278 TGCAAAAACGTCCAATACAAGTACT 59.703 36.000 0.00 0.00 0.00 2.73
1428 1498 5.512473 TGCAAAAACGTCCAATACAAGTAC 58.488 37.500 0.00 0.00 0.00 2.73
1429 1499 5.752892 TGCAAAAACGTCCAATACAAGTA 57.247 34.783 0.00 0.00 0.00 2.24
1430 1500 4.606961 CTGCAAAAACGTCCAATACAAGT 58.393 39.130 0.00 0.00 0.00 3.16
1431 1501 3.425193 GCTGCAAAAACGTCCAATACAAG 59.575 43.478 0.00 0.00 0.00 3.16
1432 1502 3.376540 GCTGCAAAAACGTCCAATACAA 58.623 40.909 0.00 0.00 0.00 2.41
1433 1503 2.287909 GGCTGCAAAAACGTCCAATACA 60.288 45.455 0.50 0.00 0.00 2.29
1434 1504 2.030274 AGGCTGCAAAAACGTCCAATAC 60.030 45.455 0.50 0.00 0.00 1.89
1435 1505 2.235016 AGGCTGCAAAAACGTCCAATA 58.765 42.857 0.50 0.00 0.00 1.90
1436 1506 1.039856 AGGCTGCAAAAACGTCCAAT 58.960 45.000 0.50 0.00 0.00 3.16
1437 1507 1.681538 TAGGCTGCAAAAACGTCCAA 58.318 45.000 0.50 0.00 0.00 3.53
1438 1508 1.681538 TTAGGCTGCAAAAACGTCCA 58.318 45.000 0.50 0.00 0.00 4.02
1439 1509 2.488153 AGATTAGGCTGCAAAAACGTCC 59.512 45.455 0.50 0.00 0.00 4.79
1440 1510 3.831715 AGATTAGGCTGCAAAAACGTC 57.168 42.857 0.50 0.00 0.00 4.34
1441 1511 4.760204 ACTAAGATTAGGCTGCAAAAACGT 59.240 37.500 0.50 0.00 35.08 3.99
1442 1512 5.296813 ACTAAGATTAGGCTGCAAAAACG 57.703 39.130 0.50 0.00 35.08 3.60
1443 1513 7.141100 TGTACTAAGATTAGGCTGCAAAAAC 57.859 36.000 0.50 0.00 35.08 2.43
1444 1514 7.753309 TTGTACTAAGATTAGGCTGCAAAAA 57.247 32.000 0.50 0.00 35.08 1.94
1445 1515 7.067008 GGATTGTACTAAGATTAGGCTGCAAAA 59.933 37.037 0.50 0.00 35.08 2.44
1446 1516 6.542370 GGATTGTACTAAGATTAGGCTGCAAA 59.458 38.462 0.50 0.00 35.08 3.68
1447 1517 6.055588 GGATTGTACTAAGATTAGGCTGCAA 58.944 40.000 0.50 1.57 35.08 4.08
1448 1518 5.130311 TGGATTGTACTAAGATTAGGCTGCA 59.870 40.000 0.50 0.00 35.08 4.41
1449 1519 5.611374 TGGATTGTACTAAGATTAGGCTGC 58.389 41.667 0.00 0.00 35.08 5.25
1450 1520 8.682936 ATTTGGATTGTACTAAGATTAGGCTG 57.317 34.615 0.00 0.00 35.08 4.85
1452 1522 9.998106 TCTATTTGGATTGTACTAAGATTAGGC 57.002 33.333 4.71 0.00 35.08 3.93
1481 1551 8.278729 ACGTTTCTGTAGCTTAGTCTTAGTAT 57.721 34.615 0.00 0.00 0.00 2.12
1512 1582 9.937175 GATGAATTGGATTTGTAGTAGCTTAAC 57.063 33.333 0.00 0.00 0.00 2.01
1520 1590 8.641541 ACAACTTTGATGAATTGGATTTGTAGT 58.358 29.630 0.00 0.00 0.00 2.73
1541 1611 7.451877 ACGGATGAGATGGAATATAGTACAACT 59.548 37.037 0.00 0.00 0.00 3.16
1575 1645 7.585936 GCCTGCAAAACAATACAATACAAAAAC 59.414 33.333 0.00 0.00 0.00 2.43
1606 1677 1.066093 TCTTTCGTGGCGTCGACAA 59.934 52.632 17.16 0.00 39.58 3.18
1618 1689 6.307318 ACTTGTAGTAAGTATTGCGTCTTTCG 59.693 38.462 0.00 0.00 43.12 3.46
1646 1717 0.395036 CCATTCGTACATGCCCCCAA 60.395 55.000 0.00 0.00 0.00 4.12
1661 1732 2.629617 CAACTCCAGTCAAAAGGCCATT 59.370 45.455 5.01 0.00 0.00 3.16
1662 1733 2.242043 CAACTCCAGTCAAAAGGCCAT 58.758 47.619 5.01 0.00 0.00 4.40
1723 1794 1.841663 CTTTGTTCCACCAGTCCGCG 61.842 60.000 0.00 0.00 0.00 6.46
1726 1797 3.816994 AGTAACTTTGTTCCACCAGTCC 58.183 45.455 0.00 0.00 0.00 3.85
1736 1807 9.623000 AAGGTGTATTCAACTAGTAACTTTGTT 57.377 29.630 0.00 0.00 41.20 2.83
1741 1812 8.203681 AGGAAAGGTGTATTCAACTAGTAACT 57.796 34.615 0.00 0.00 41.20 2.24
1756 1827 1.903183 GCTGTAGGAGAGGAAAGGTGT 59.097 52.381 0.00 0.00 0.00 4.16
1762 1833 5.767670 AGTAAGTATGCTGTAGGAGAGGAA 58.232 41.667 0.00 0.00 0.00 3.36
1764 1835 6.205853 CACTAGTAAGTATGCTGTAGGAGAGG 59.794 46.154 0.00 0.00 33.48 3.69
1766 1837 6.660800 ACACTAGTAAGTATGCTGTAGGAGA 58.339 40.000 0.00 0.00 33.48 3.71
1767 1838 6.542735 TGACACTAGTAAGTATGCTGTAGGAG 59.457 42.308 0.00 0.00 33.48 3.69
1768 1839 6.420638 TGACACTAGTAAGTATGCTGTAGGA 58.579 40.000 0.00 0.00 33.48 2.94
1769 1840 6.694877 TGACACTAGTAAGTATGCTGTAGG 57.305 41.667 0.00 0.00 33.48 3.18
1770 1841 8.981724 TTTTGACACTAGTAAGTATGCTGTAG 57.018 34.615 0.00 0.00 33.48 2.74
1771 1842 9.938280 AATTTTGACACTAGTAAGTATGCTGTA 57.062 29.630 0.00 0.00 33.48 2.74
1773 1844 7.693951 GCAATTTTGACACTAGTAAGTATGCTG 59.306 37.037 0.00 0.00 33.48 4.41
1775 1846 7.752695 AGCAATTTTGACACTAGTAAGTATGC 58.247 34.615 0.00 0.00 33.48 3.14
1810 1887 6.946009 CCCTCCGTCCCATAATATAAAAACAT 59.054 38.462 0.00 0.00 0.00 2.71
1815 1892 5.247564 CACTCCCTCCGTCCCATAATATAAA 59.752 44.000 0.00 0.00 0.00 1.40
1831 1908 3.798202 CACTAACATAAGCCACTCCCTC 58.202 50.000 0.00 0.00 0.00 4.30
1834 1911 2.289565 GGCACTAACATAAGCCACTCC 58.710 52.381 0.00 0.00 46.26 3.85
1840 1917 4.455877 AGTCTTGTTGGCACTAACATAAGC 59.544 41.667 0.15 0.00 40.00 3.09
1841 1918 6.183360 GCTAGTCTTGTTGGCACTAACATAAG 60.183 42.308 0.15 0.00 40.00 1.73
1842 1919 5.642063 GCTAGTCTTGTTGGCACTAACATAA 59.358 40.000 0.15 0.00 40.00 1.90
1843 1920 5.046591 AGCTAGTCTTGTTGGCACTAACATA 60.047 40.000 0.15 0.00 40.00 2.29
1844 1921 4.003648 GCTAGTCTTGTTGGCACTAACAT 58.996 43.478 0.15 0.00 40.00 2.71
1845 1922 3.071023 AGCTAGTCTTGTTGGCACTAACA 59.929 43.478 0.00 0.00 38.69 2.41
1846 1923 3.665190 AGCTAGTCTTGTTGGCACTAAC 58.335 45.455 0.00 0.00 0.00 2.34
1847 1924 4.065088 CAAGCTAGTCTTGTTGGCACTAA 58.935 43.478 14.91 0.00 45.48 2.24
1848 1925 3.664107 CAAGCTAGTCTTGTTGGCACTA 58.336 45.455 14.91 0.00 45.48 2.74
1849 1926 2.498167 CAAGCTAGTCTTGTTGGCACT 58.502 47.619 14.91 0.00 45.48 4.40
1850 1927 2.977405 CAAGCTAGTCTTGTTGGCAC 57.023 50.000 14.91 0.00 45.48 5.01
1858 1935 5.046014 ACAATCCTCATGACAAGCTAGTCTT 60.046 40.000 0.00 0.00 39.27 3.01
1910 1987 5.463724 CGTCCAATCCAAAGATAGAACTAGC 59.536 44.000 0.00 0.00 30.42 3.42
1917 1994 4.408182 AGACCGTCCAATCCAAAGATAG 57.592 45.455 0.00 0.00 30.42 2.08
1932 2009 4.338682 GCCGATATAAGATGGATAGACCGT 59.661 45.833 0.00 0.00 42.61 4.83
1933 2010 4.580995 AGCCGATATAAGATGGATAGACCG 59.419 45.833 0.00 0.00 42.61 4.79
1934 2011 6.127310 ACAAGCCGATATAAGATGGATAGACC 60.127 42.308 0.00 0.00 39.54 3.85
1981 2077 0.830648 ATGTAGCTAGCGGGCAAAGA 59.169 50.000 9.55 0.00 34.17 2.52
1998 2094 7.909267 TCAATATGTGTTCGAAAGAGCTTATG 58.091 34.615 0.00 0.00 43.69 1.90
1999 2095 8.554528 CATCAATATGTGTTCGAAAGAGCTTAT 58.445 33.333 0.00 0.00 43.69 1.73
2000 2096 7.465916 GCATCAATATGTGTTCGAAAGAGCTTA 60.466 37.037 0.00 0.00 37.09 3.09
2001 2097 6.676456 GCATCAATATGTGTTCGAAAGAGCTT 60.676 38.462 0.00 0.00 37.09 3.74
2002 2098 5.220739 GCATCAATATGTGTTCGAAAGAGCT 60.221 40.000 0.00 0.00 37.09 4.09
2003 2099 4.966366 GCATCAATATGTGTTCGAAAGAGC 59.034 41.667 0.00 0.00 37.09 4.09
2004 2100 6.190264 CAGCATCAATATGTGTTCGAAAGAG 58.810 40.000 0.00 0.00 37.09 2.85
2007 2103 4.438608 GCCAGCATCAATATGTGTTCGAAA 60.439 41.667 0.00 0.00 35.38 3.46
2008 2104 3.065233 GCCAGCATCAATATGTGTTCGAA 59.935 43.478 0.00 0.00 35.38 3.71
2009 2105 2.613595 GCCAGCATCAATATGTGTTCGA 59.386 45.455 0.00 0.00 35.38 3.71
2010 2106 2.287188 GGCCAGCATCAATATGTGTTCG 60.287 50.000 0.00 0.00 35.38 3.95
2011 2107 2.287188 CGGCCAGCATCAATATGTGTTC 60.287 50.000 2.24 0.00 35.38 3.18
2052 2148 4.181010 CAGATGGACCGGCAGGGG 62.181 72.222 8.08 0.00 43.47 4.79
2057 2153 2.746375 ATGACCCAGATGGACCGGC 61.746 63.158 0.00 0.00 37.39 6.13
2060 2156 0.181350 GACCATGACCCAGATGGACC 59.819 60.000 5.78 0.00 42.81 4.46
2061 2157 0.179073 CGACCATGACCCAGATGGAC 60.179 60.000 5.78 0.00 42.81 4.02
2063 2159 1.146930 CCGACCATGACCCAGATGG 59.853 63.158 0.00 0.00 45.26 3.51
2064 2160 0.462581 CACCGACCATGACCCAGATG 60.463 60.000 0.00 0.00 0.00 2.90
2065 2161 1.907739 CACCGACCATGACCCAGAT 59.092 57.895 0.00 0.00 0.00 2.90
2067 2163 2.436646 GCACCGACCATGACCCAG 60.437 66.667 0.00 0.00 0.00 4.45
2068 2164 3.245346 TGCACCGACCATGACCCA 61.245 61.111 0.00 0.00 0.00 4.51
2069 2165 2.746277 GTGCACCGACCATGACCC 60.746 66.667 5.22 0.00 0.00 4.46
2070 2166 3.118454 CGTGCACCGACCATGACC 61.118 66.667 12.15 0.00 39.56 4.02
2071 2167 1.503818 AAACGTGCACCGACCATGAC 61.504 55.000 12.15 0.00 40.70 3.06
2073 2169 0.030101 AAAAACGTGCACCGACCATG 59.970 50.000 12.15 0.00 40.70 3.66
2074 2170 0.309612 GAAAAACGTGCACCGACCAT 59.690 50.000 12.15 0.00 40.70 3.55
2076 2172 0.041576 GAGAAAAACGTGCACCGACC 60.042 55.000 12.15 0.00 40.70 4.79
2078 2174 1.928653 CGAGAAAAACGTGCACCGA 59.071 52.632 12.15 0.00 40.70 4.69
2079 2175 1.721133 GCGAGAAAAACGTGCACCG 60.721 57.895 12.15 9.19 44.03 4.94
2080 2176 0.384353 GAGCGAGAAAAACGTGCACC 60.384 55.000 12.15 0.00 0.00 5.01
2081 2177 0.384353 GGAGCGAGAAAAACGTGCAC 60.384 55.000 6.82 6.82 0.00 4.57
2082 2178 0.531974 AGGAGCGAGAAAAACGTGCA 60.532 50.000 0.00 0.00 0.00 4.57
2083 2179 0.110644 CAGGAGCGAGAAAAACGTGC 60.111 55.000 0.00 0.00 0.00 5.34
2139 2548 1.136085 CGTGTTAGGCATTTGTGTCCG 60.136 52.381 0.00 0.00 0.00 4.79
2174 2594 8.442384 GTTGCATTGTCAAAAAGAAGAAGAAAA 58.558 29.630 0.00 0.00 0.00 2.29
2178 2598 6.237915 GGTGTTGCATTGTCAAAAAGAAGAAG 60.238 38.462 0.00 0.00 0.00 2.85
2179 2599 5.580297 GGTGTTGCATTGTCAAAAAGAAGAA 59.420 36.000 0.00 0.00 0.00 2.52
2181 2601 5.111293 AGGTGTTGCATTGTCAAAAAGAAG 58.889 37.500 0.00 0.00 0.00 2.85
2184 2604 4.869297 TGAAGGTGTTGCATTGTCAAAAAG 59.131 37.500 0.00 0.00 0.00 2.27
2189 2609 2.557924 GGATGAAGGTGTTGCATTGTCA 59.442 45.455 0.00 0.00 0.00 3.58
2210 2630 5.220624 GCATATCACAAAGACTCAAGAGCAG 60.221 44.000 0.00 0.00 0.00 4.24
2230 2650 3.554934 GAACCACCTCATGAATGGCATA 58.445 45.455 20.73 0.00 36.96 3.14
2231 2651 2.381911 GAACCACCTCATGAATGGCAT 58.618 47.619 20.73 12.71 36.96 4.40
2256 2676 3.119531 GCTATCCATGAGAGAGACCATCG 60.120 52.174 9.24 0.00 35.74 3.84
2257 2677 3.195396 GGCTATCCATGAGAGAGACCATC 59.805 52.174 9.24 0.00 35.64 3.51
2259 2679 2.178764 AGGCTATCCATGAGAGAGACCA 59.821 50.000 7.74 0.00 43.48 4.02
2267 2687 4.152647 TGGTAGTGTAGGCTATCCATGAG 58.847 47.826 0.00 0.00 33.74 2.90
2268 2688 4.152647 CTGGTAGTGTAGGCTATCCATGA 58.847 47.826 0.00 0.00 33.74 3.07
2299 2719 6.093633 GCGAAAGATTTTATACTGGACCTTGT 59.906 38.462 0.00 0.00 0.00 3.16
2322 2743 3.393800 AGCACTTGGTATAGCTATTGCG 58.606 45.455 12.39 0.00 45.42 4.85
2388 2809 8.864087 AGCATACTGTTAGTGATATCATCAAGA 58.136 33.333 9.02 4.10 41.69 3.02
2435 2856 3.520696 TGGCTAGTATGCACCTCCATAT 58.479 45.455 0.00 0.00 31.01 1.78
2436 2857 2.970987 TGGCTAGTATGCACCTCCATA 58.029 47.619 0.00 0.00 34.04 2.74
2437 2858 1.806496 TGGCTAGTATGCACCTCCAT 58.194 50.000 0.00 0.00 34.04 3.41
2438 2859 1.806496 ATGGCTAGTATGCACCTCCA 58.194 50.000 0.00 0.00 34.04 3.86
2442 2863 3.804036 TGTTGTATGGCTAGTATGCACC 58.196 45.455 0.00 0.00 34.04 5.01
2454 2875 8.726870 TCATCATAGATATGCATGTTGTATGG 57.273 34.615 19.57 10.74 33.76 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.