Multiple sequence alignment - TraesCS1B01G477300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G477300 chr1B 100.000 6363 0 0 1 6363 685639080 685645442 0.000000e+00 11751.0
1 TraesCS1B01G477300 chr1B 94.805 539 22 5 1 536 358031766 358031231 0.000000e+00 835.0
2 TraesCS1B01G477300 chr1D 95.043 4156 162 24 1562 5685 493479301 493483444 0.000000e+00 6493.0
3 TraesCS1B01G477300 chr1D 89.410 746 27 21 850 1566 493478468 493479190 0.000000e+00 893.0
4 TraesCS1B01G477300 chr1D 94.344 389 15 3 5720 6108 493483444 493483825 1.980000e-164 590.0
5 TraesCS1B01G477300 chr1D 93.038 158 6 2 6106 6259 493484131 493484287 6.420000e-55 226.0
6 TraesCS1B01G477300 chr1D 94.898 98 2 2 6257 6351 493484345 493484442 3.970000e-32 150.0
7 TraesCS1B01G477300 chr1A 94.236 2290 78 14 4006 6274 591609212 591611468 0.000000e+00 3448.0
8 TraesCS1B01G477300 chr1A 94.792 1632 69 12 2277 3896 591607594 591609221 0.000000e+00 2529.0
9 TraesCS1B01G477300 chr1A 89.904 624 46 11 1607 2225 591606988 591607599 0.000000e+00 787.0
10 TraesCS1B01G477300 chr1A 92.918 353 10 2 1023 1375 591606039 591606376 3.430000e-137 499.0
11 TraesCS1B01G477300 chr1A 96.774 93 2 1 6260 6351 591611494 591611586 3.070000e-33 154.0
12 TraesCS1B01G477300 chr1A 96.970 66 1 1 1441 1506 591606405 591606469 6.740000e-20 110.0
13 TraesCS1B01G477300 chr1A 87.037 54 4 2 909 962 591605928 591605978 2.480000e-04 58.4
14 TraesCS1B01G477300 chr2B 95.185 540 21 4 1 537 262903002 262903539 0.000000e+00 848.0
15 TraesCS1B01G477300 chr4A 94.834 542 24 3 1 540 137546426 137545887 0.000000e+00 843.0
16 TraesCS1B01G477300 chr4A 85.215 372 45 4 2647 3016 580657994 580658357 2.170000e-99 374.0
17 TraesCS1B01G477300 chr4A 84.793 217 21 7 4020 4233 580658850 580659057 2.320000e-49 207.0
18 TraesCS1B01G477300 chr6B 94.659 543 24 4 1 540 63230463 63229923 0.000000e+00 837.0
19 TraesCS1B01G477300 chr7B 94.805 539 23 4 1 536 94806655 94806119 0.000000e+00 835.0
20 TraesCS1B01G477300 chr7B 93.829 551 29 4 1 548 154684395 154683847 0.000000e+00 824.0
21 TraesCS1B01G477300 chr5A 94.805 539 23 4 1 536 504754803 504754267 0.000000e+00 835.0
22 TraesCS1B01G477300 chr7D 94.505 546 19 10 1 540 114467812 114467272 0.000000e+00 832.0
23 TraesCS1B01G477300 chr7D 94.043 554 23 9 1 549 151540608 151540060 0.000000e+00 832.0
24 TraesCS1B01G477300 chr4B 81.310 519 69 15 2647 3158 33068417 33067920 4.620000e-106 396.0
25 TraesCS1B01G477300 chr4B 84.577 201 18 12 4020 4217 33067293 33067103 3.030000e-43 187.0
26 TraesCS1B01G477300 chr4D 84.409 372 48 5 2647 3016 21689613 21689976 2.180000e-94 357.0
27 TraesCS1B01G477300 chr4D 84.722 216 23 8 4020 4233 21690422 21690629 2.320000e-49 207.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G477300 chr1B 685639080 685645442 6362 False 11751.000000 11751 100.0000 1 6363 1 chr1B.!!$F1 6362
1 TraesCS1B01G477300 chr1B 358031231 358031766 535 True 835.000000 835 94.8050 1 536 1 chr1B.!!$R1 535
2 TraesCS1B01G477300 chr1D 493478468 493484442 5974 False 1670.400000 6493 93.3466 850 6351 5 chr1D.!!$F1 5501
3 TraesCS1B01G477300 chr1A 591605928 591611586 5658 False 1083.628571 3448 93.2330 909 6351 7 chr1A.!!$F1 5442
4 TraesCS1B01G477300 chr2B 262903002 262903539 537 False 848.000000 848 95.1850 1 537 1 chr2B.!!$F1 536
5 TraesCS1B01G477300 chr4A 137545887 137546426 539 True 843.000000 843 94.8340 1 540 1 chr4A.!!$R1 539
6 TraesCS1B01G477300 chr4A 580657994 580659057 1063 False 290.500000 374 85.0040 2647 4233 2 chr4A.!!$F1 1586
7 TraesCS1B01G477300 chr6B 63229923 63230463 540 True 837.000000 837 94.6590 1 540 1 chr6B.!!$R1 539
8 TraesCS1B01G477300 chr7B 94806119 94806655 536 True 835.000000 835 94.8050 1 536 1 chr7B.!!$R1 535
9 TraesCS1B01G477300 chr7B 154683847 154684395 548 True 824.000000 824 93.8290 1 548 1 chr7B.!!$R2 547
10 TraesCS1B01G477300 chr5A 504754267 504754803 536 True 835.000000 835 94.8050 1 536 1 chr5A.!!$R1 535
11 TraesCS1B01G477300 chr7D 114467272 114467812 540 True 832.000000 832 94.5050 1 540 1 chr7D.!!$R1 539
12 TraesCS1B01G477300 chr7D 151540060 151540608 548 True 832.000000 832 94.0430 1 549 1 chr7D.!!$R2 548
13 TraesCS1B01G477300 chr4B 33067103 33068417 1314 True 291.500000 396 82.9435 2647 4217 2 chr4B.!!$R1 1570
14 TraesCS1B01G477300 chr4D 21689613 21690629 1016 False 282.000000 357 84.5655 2647 4233 2 chr4D.!!$F1 1586

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
415 423 0.028770 CACCACACACGCGAATTGTT 59.971 50.0 15.93 0.00 0.00 2.83 F
928 936 0.112412 TCCTTGTTTCCTTGGCCTCC 59.888 55.0 3.32 0.00 0.00 4.30 F
1377 1424 0.331954 TCTTCCGCTCAGAGGTACCT 59.668 55.0 16.26 16.26 0.00 3.08 F
1667 2248 0.461339 TACCCTTTGAATCGAGCGGC 60.461 55.0 0.00 0.00 0.00 6.53 F
3391 4002 0.897621 AGGCAAACATTAGCTTGGGC 59.102 50.0 0.00 0.00 39.06 5.36 F
4566 5479 0.253044 ATAGAAGGCGGCACACACAT 59.747 50.0 13.08 0.00 0.00 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2151 2741 1.001815 ACGCCATAACAACACAGCAAC 60.002 47.619 0.0 0.0 0.0 4.17 R
2901 3498 2.697751 CACACCATTTTCCCCTCAACAA 59.302 45.455 0.0 0.0 0.0 2.83 R
3307 3917 3.923017 AAGCAAACATGGACTAACAGC 57.077 42.857 0.0 0.0 0.0 4.40 R
3522 4146 3.820557 ACTCAACAACCAAGCACTGTAT 58.179 40.909 0.0 0.0 0.0 2.29 R
5000 5913 0.109039 GAGCGACCTTGGTGAGTCTC 60.109 60.000 0.0 0.0 0.0 3.36 R
5989 6921 0.329596 AATCCCAGGAAGTGAGCCAC 59.670 55.000 0.0 0.0 34.1 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
107 108 0.732880 CTGCTTACGTGCACGCTAGT 60.733 55.000 37.35 21.37 44.43 2.57
294 299 0.548989 TGGCAAACTACCCACACACT 59.451 50.000 0.00 0.00 0.00 3.55
319 325 1.933181 CTTGTGCGTGACTGAAACTGA 59.067 47.619 0.00 0.00 0.00 3.41
373 379 0.399075 CCCCTCCGTGTGGTAAAACT 59.601 55.000 0.00 0.00 36.30 2.66
410 418 2.125472 ACACACCACACACGCGAA 60.125 55.556 15.93 0.00 0.00 4.70
415 423 0.028770 CACCACACACGCGAATTGTT 59.971 50.000 15.93 0.00 0.00 2.83
443 451 7.558604 ACATGGCATACAAAATCAGCTAATTT 58.441 30.769 0.00 0.00 0.00 1.82
475 483 2.433868 GTGCAGAAGTTACTGGACGA 57.566 50.000 0.00 0.00 45.71 4.20
501 509 1.000955 GAGACGTGTGGGTGAGTTGAT 59.999 52.381 0.00 0.00 0.00 2.57
502 510 1.416401 AGACGTGTGGGTGAGTTGATT 59.584 47.619 0.00 0.00 0.00 2.57
540 548 3.797256 TGGGCGTTAACATTTTCGTTTTG 59.203 39.130 6.39 0.00 0.00 2.44
541 549 3.797796 GGGCGTTAACATTTTCGTTTTGT 59.202 39.130 6.39 0.00 0.00 2.83
542 550 4.268167 GGGCGTTAACATTTTCGTTTTGTT 59.732 37.500 6.39 0.00 37.37 2.83
543 551 5.220434 GGGCGTTAACATTTTCGTTTTGTTT 60.220 36.000 6.39 0.00 35.37 2.83
544 552 6.242107 GGCGTTAACATTTTCGTTTTGTTTT 58.758 32.000 6.39 0.00 35.37 2.43
545 553 6.737301 GGCGTTAACATTTTCGTTTTGTTTTT 59.263 30.769 6.39 0.00 35.37 1.94
568 576 1.740025 GGCAACCACTAGAGTTGATGC 59.260 52.381 24.83 15.15 46.03 3.91
569 577 2.426522 GCAACCACTAGAGTTGATGCA 58.573 47.619 24.83 0.00 46.03 3.96
570 578 2.813754 GCAACCACTAGAGTTGATGCAA 59.186 45.455 24.83 0.00 46.03 4.08
571 579 3.253188 GCAACCACTAGAGTTGATGCAAA 59.747 43.478 24.83 0.00 46.03 3.68
572 580 4.082571 GCAACCACTAGAGTTGATGCAAAT 60.083 41.667 24.83 0.00 46.03 2.32
573 581 5.565439 GCAACCACTAGAGTTGATGCAAATT 60.565 40.000 24.83 0.00 46.03 1.82
574 582 6.349280 GCAACCACTAGAGTTGATGCAAATTA 60.349 38.462 24.83 0.00 46.03 1.40
575 583 6.743575 ACCACTAGAGTTGATGCAAATTAC 57.256 37.500 0.00 0.00 0.00 1.89
576 584 6.237901 ACCACTAGAGTTGATGCAAATTACA 58.762 36.000 0.00 0.00 0.00 2.41
577 585 6.714810 ACCACTAGAGTTGATGCAAATTACAA 59.285 34.615 0.00 0.00 0.00 2.41
578 586 7.394359 ACCACTAGAGTTGATGCAAATTACAAT 59.606 33.333 0.00 0.00 0.00 2.71
579 587 7.699391 CCACTAGAGTTGATGCAAATTACAATG 59.301 37.037 0.00 0.00 0.00 2.82
580 588 8.239314 CACTAGAGTTGATGCAAATTACAATGT 58.761 33.333 0.00 0.00 0.00 2.71
581 589 9.448438 ACTAGAGTTGATGCAAATTACAATGTA 57.552 29.630 0.00 0.00 0.00 2.29
612 620 9.787532 AATCATATGTTGGAACATCGTTTTTAG 57.212 29.630 8.27 0.00 46.10 1.85
613 621 7.247728 TCATATGTTGGAACATCGTTTTTAGC 58.752 34.615 8.27 0.00 46.10 3.09
614 622 5.705609 ATGTTGGAACATCGTTTTTAGCT 57.294 34.783 0.00 0.00 46.10 3.32
615 623 5.103290 TGTTGGAACATCGTTTTTAGCTC 57.897 39.130 0.00 0.00 39.30 4.09
616 624 4.576873 TGTTGGAACATCGTTTTTAGCTCA 59.423 37.500 0.00 0.00 39.30 4.26
617 625 5.147162 GTTGGAACATCGTTTTTAGCTCAG 58.853 41.667 0.00 0.00 39.30 3.35
618 626 4.637276 TGGAACATCGTTTTTAGCTCAGA 58.363 39.130 0.00 0.00 0.00 3.27
619 627 4.690748 TGGAACATCGTTTTTAGCTCAGAG 59.309 41.667 0.00 0.00 0.00 3.35
620 628 4.691216 GGAACATCGTTTTTAGCTCAGAGT 59.309 41.667 0.00 0.00 0.00 3.24
621 629 5.179555 GGAACATCGTTTTTAGCTCAGAGTT 59.820 40.000 0.00 0.00 0.00 3.01
622 630 5.847670 ACATCGTTTTTAGCTCAGAGTTC 57.152 39.130 0.00 0.00 0.00 3.01
623 631 5.297547 ACATCGTTTTTAGCTCAGAGTTCA 58.702 37.500 0.00 0.00 0.00 3.18
624 632 5.177696 ACATCGTTTTTAGCTCAGAGTTCAC 59.822 40.000 0.00 0.00 0.00 3.18
625 633 4.945246 TCGTTTTTAGCTCAGAGTTCACT 58.055 39.130 0.00 0.00 0.00 3.41
626 634 4.982916 TCGTTTTTAGCTCAGAGTTCACTC 59.017 41.667 0.00 0.00 43.17 3.51
627 635 4.745125 CGTTTTTAGCTCAGAGTTCACTCA 59.255 41.667 9.62 0.00 45.21 3.41
628 636 5.234329 CGTTTTTAGCTCAGAGTTCACTCAA 59.766 40.000 9.62 0.00 45.21 3.02
629 637 6.423042 GTTTTTAGCTCAGAGTTCACTCAAC 58.577 40.000 9.62 0.00 45.21 3.18
630 638 4.937201 TTAGCTCAGAGTTCACTCAACA 57.063 40.909 9.62 0.00 45.21 3.33
631 639 3.827008 AGCTCAGAGTTCACTCAACAA 57.173 42.857 9.62 0.00 45.21 2.83
632 640 3.462021 AGCTCAGAGTTCACTCAACAAC 58.538 45.455 9.62 0.00 45.21 3.32
633 641 3.133721 AGCTCAGAGTTCACTCAACAACT 59.866 43.478 9.62 0.00 45.21 3.16
634 642 4.342378 AGCTCAGAGTTCACTCAACAACTA 59.658 41.667 9.62 0.00 45.21 2.24
635 643 5.050490 GCTCAGAGTTCACTCAACAACTAA 58.950 41.667 9.62 0.00 45.21 2.24
636 644 5.698545 GCTCAGAGTTCACTCAACAACTAAT 59.301 40.000 9.62 0.00 45.21 1.73
637 645 6.203723 GCTCAGAGTTCACTCAACAACTAATT 59.796 38.462 9.62 0.00 45.21 1.40
638 646 7.385205 GCTCAGAGTTCACTCAACAACTAATTA 59.615 37.037 9.62 0.00 45.21 1.40
639 647 8.818141 TCAGAGTTCACTCAACAACTAATTAG 57.182 34.615 11.05 11.05 45.21 1.73
640 648 7.872993 TCAGAGTTCACTCAACAACTAATTAGG 59.127 37.037 16.73 2.57 45.21 2.69
641 649 6.651225 AGAGTTCACTCAACAACTAATTAGGC 59.349 38.462 16.73 0.00 45.21 3.93
642 650 6.296026 AGTTCACTCAACAACTAATTAGGCA 58.704 36.000 16.73 0.00 37.48 4.75
643 651 6.204882 AGTTCACTCAACAACTAATTAGGCAC 59.795 38.462 16.73 0.00 37.48 5.01
644 652 4.688879 TCACTCAACAACTAATTAGGCACG 59.311 41.667 16.73 4.63 0.00 5.34
645 653 4.688879 CACTCAACAACTAATTAGGCACGA 59.311 41.667 16.73 5.76 0.00 4.35
646 654 4.689345 ACTCAACAACTAATTAGGCACGAC 59.311 41.667 16.73 0.00 0.00 4.34
647 655 3.676172 TCAACAACTAATTAGGCACGACG 59.324 43.478 16.73 0.00 0.00 5.12
648 656 3.581024 ACAACTAATTAGGCACGACGA 57.419 42.857 16.73 0.00 0.00 4.20
649 657 3.248266 ACAACTAATTAGGCACGACGAC 58.752 45.455 16.73 0.00 0.00 4.34
650 658 3.247442 CAACTAATTAGGCACGACGACA 58.753 45.455 16.73 0.00 0.00 4.35
651 659 3.795623 ACTAATTAGGCACGACGACAT 57.204 42.857 16.73 0.00 0.00 3.06
652 660 4.906065 ACTAATTAGGCACGACGACATA 57.094 40.909 16.73 0.00 0.00 2.29
653 661 5.449107 ACTAATTAGGCACGACGACATAT 57.551 39.130 16.73 0.00 0.00 1.78
654 662 5.839621 ACTAATTAGGCACGACGACATATT 58.160 37.500 16.73 0.00 0.00 1.28
655 663 5.919141 ACTAATTAGGCACGACGACATATTC 59.081 40.000 16.73 0.00 0.00 1.75
669 677 5.922546 CGACATATTCGGTTCAAAAGTTCA 58.077 37.500 0.00 0.00 44.60 3.18
670 678 6.367421 CGACATATTCGGTTCAAAAGTTCAA 58.633 36.000 0.00 0.00 44.60 2.69
671 679 7.021196 CGACATATTCGGTTCAAAAGTTCAAT 58.979 34.615 0.00 0.00 44.60 2.57
672 680 7.537306 CGACATATTCGGTTCAAAAGTTCAATT 59.463 33.333 0.00 0.00 44.60 2.32
673 681 9.834628 GACATATTCGGTTCAAAAGTTCAATTA 57.165 29.630 0.00 0.00 0.00 1.40
674 682 9.620660 ACATATTCGGTTCAAAAGTTCAATTAC 57.379 29.630 0.00 0.00 0.00 1.89
675 683 9.840427 CATATTCGGTTCAAAAGTTCAATTACT 57.160 29.630 0.00 0.00 0.00 2.24
678 686 9.840427 ATTCGGTTCAAAAGTTCAATTACTATG 57.160 29.630 0.00 0.00 0.00 2.23
679 687 8.385898 TCGGTTCAAAAGTTCAATTACTATGT 57.614 30.769 0.00 0.00 0.00 2.29
680 688 8.842280 TCGGTTCAAAAGTTCAATTACTATGTT 58.158 29.630 0.00 0.00 0.00 2.71
681 689 9.113876 CGGTTCAAAAGTTCAATTACTATGTTC 57.886 33.333 0.00 0.00 0.00 3.18
690 698 9.739276 AGTTCAATTACTATGTTCTTCATTCCA 57.261 29.630 0.00 0.00 37.91 3.53
697 705 9.638239 TTACTATGTTCTTCATTCCAATTTTGC 57.362 29.630 0.00 0.00 37.91 3.68
698 706 7.669427 ACTATGTTCTTCATTCCAATTTTGCA 58.331 30.769 0.00 0.00 37.91 4.08
699 707 8.316214 ACTATGTTCTTCATTCCAATTTTGCAT 58.684 29.630 0.00 0.00 37.91 3.96
700 708 7.989416 ATGTTCTTCATTCCAATTTTGCATT 57.011 28.000 0.00 0.00 32.08 3.56
701 709 7.424227 TGTTCTTCATTCCAATTTTGCATTC 57.576 32.000 0.00 0.00 0.00 2.67
702 710 6.145858 TGTTCTTCATTCCAATTTTGCATTCG 59.854 34.615 0.00 0.00 0.00 3.34
703 711 5.782047 TCTTCATTCCAATTTTGCATTCGT 58.218 33.333 0.00 0.00 0.00 3.85
704 712 6.222389 TCTTCATTCCAATTTTGCATTCGTT 58.778 32.000 0.00 0.00 0.00 3.85
705 713 6.365789 TCTTCATTCCAATTTTGCATTCGTTC 59.634 34.615 0.00 0.00 0.00 3.95
706 714 5.536260 TCATTCCAATTTTGCATTCGTTCA 58.464 33.333 0.00 0.00 0.00 3.18
707 715 6.164876 TCATTCCAATTTTGCATTCGTTCAT 58.835 32.000 0.00 0.00 0.00 2.57
708 716 6.649973 TCATTCCAATTTTGCATTCGTTCATT 59.350 30.769 0.00 0.00 0.00 2.57
709 717 6.464895 TTCCAATTTTGCATTCGTTCATTC 57.535 33.333 0.00 0.00 0.00 2.67
710 718 5.536260 TCCAATTTTGCATTCGTTCATTCA 58.464 33.333 0.00 0.00 0.00 2.57
711 719 6.164876 TCCAATTTTGCATTCGTTCATTCAT 58.835 32.000 0.00 0.00 0.00 2.57
712 720 6.649973 TCCAATTTTGCATTCGTTCATTCATT 59.350 30.769 0.00 0.00 0.00 2.57
713 721 6.957077 CCAATTTTGCATTCGTTCATTCATTC 59.043 34.615 0.00 0.00 0.00 2.67
714 722 7.360185 CCAATTTTGCATTCGTTCATTCATTCA 60.360 33.333 0.00 0.00 0.00 2.57
715 723 7.837202 ATTTTGCATTCGTTCATTCATTCAT 57.163 28.000 0.00 0.00 0.00 2.57
716 724 7.655236 TTTTGCATTCGTTCATTCATTCATT 57.345 28.000 0.00 0.00 0.00 2.57
717 725 6.874297 TTGCATTCGTTCATTCATTCATTC 57.126 33.333 0.00 0.00 0.00 2.67
718 726 5.952033 TGCATTCGTTCATTCATTCATTCA 58.048 33.333 0.00 0.00 0.00 2.57
719 727 6.566141 TGCATTCGTTCATTCATTCATTCAT 58.434 32.000 0.00 0.00 0.00 2.57
720 728 6.474102 TGCATTCGTTCATTCATTCATTCATG 59.526 34.615 0.00 0.00 0.00 3.07
721 729 6.074516 GCATTCGTTCATTCATTCATTCATGG 60.075 38.462 0.00 0.00 0.00 3.66
722 730 4.923893 TCGTTCATTCATTCATTCATGGC 58.076 39.130 0.00 0.00 0.00 4.40
723 731 4.046462 CGTTCATTCATTCATTCATGGCC 58.954 43.478 0.00 0.00 0.00 5.36
724 732 4.202080 CGTTCATTCATTCATTCATGGCCT 60.202 41.667 3.32 0.00 0.00 5.19
725 733 5.667466 GTTCATTCATTCATTCATGGCCTT 58.333 37.500 3.32 0.00 0.00 4.35
726 734 5.270893 TCATTCATTCATTCATGGCCTTG 57.729 39.130 12.41 12.41 0.00 3.61
727 735 4.712829 TCATTCATTCATTCATGGCCTTGT 59.287 37.500 17.54 0.00 0.00 3.16
728 736 5.188163 TCATTCATTCATTCATGGCCTTGTT 59.812 36.000 17.54 4.98 0.00 2.83
729 737 4.459390 TCATTCATTCATGGCCTTGTTG 57.541 40.909 17.54 15.56 0.00 3.33
730 738 3.833650 TCATTCATTCATGGCCTTGTTGT 59.166 39.130 17.54 3.42 0.00 3.32
731 739 4.283978 TCATTCATTCATGGCCTTGTTGTT 59.716 37.500 17.54 7.33 0.00 2.83
732 740 3.663995 TCATTCATGGCCTTGTTGTTG 57.336 42.857 17.54 11.08 0.00 3.33
733 741 2.964464 TCATTCATGGCCTTGTTGTTGT 59.036 40.909 17.54 0.00 0.00 3.32
734 742 3.387374 TCATTCATGGCCTTGTTGTTGTT 59.613 39.130 17.54 0.00 0.00 2.83
735 743 2.886862 TCATGGCCTTGTTGTTGTTG 57.113 45.000 17.54 0.00 0.00 3.33
736 744 2.106566 TCATGGCCTTGTTGTTGTTGT 58.893 42.857 17.54 0.00 0.00 3.32
737 745 2.499289 TCATGGCCTTGTTGTTGTTGTT 59.501 40.909 17.54 0.00 0.00 2.83
738 746 2.376808 TGGCCTTGTTGTTGTTGTTG 57.623 45.000 3.32 0.00 0.00 3.33
739 747 1.620819 TGGCCTTGTTGTTGTTGTTGT 59.379 42.857 3.32 0.00 0.00 3.32
740 748 2.037772 TGGCCTTGTTGTTGTTGTTGTT 59.962 40.909 3.32 0.00 0.00 2.83
741 749 2.414825 GGCCTTGTTGTTGTTGTTGTTG 59.585 45.455 0.00 0.00 0.00 3.33
742 750 3.063485 GCCTTGTTGTTGTTGTTGTTGT 58.937 40.909 0.00 0.00 0.00 3.32
743 751 3.496507 GCCTTGTTGTTGTTGTTGTTGTT 59.503 39.130 0.00 0.00 0.00 2.83
744 752 4.610231 GCCTTGTTGTTGTTGTTGTTGTTG 60.610 41.667 0.00 0.00 0.00 3.33
745 753 4.509600 CCTTGTTGTTGTTGTTGTTGTTGT 59.490 37.500 0.00 0.00 0.00 3.32
746 754 5.007136 CCTTGTTGTTGTTGTTGTTGTTGTT 59.993 36.000 0.00 0.00 0.00 2.83
747 755 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
748 756 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
749 757 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
750 758 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
751 759 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
752 760 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
753 761 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
754 762 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
755 763 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
756 764 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
757 765 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
758 766 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
759 767 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
760 768 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
761 769 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
762 770 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
763 771 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
764 772 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
765 773 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
766 774 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
767 775 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
768 776 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
769 777 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
770 778 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
771 779 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
772 780 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
773 781 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
774 782 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
775 783 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
776 784 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
777 785 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
778 786 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
779 787 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
780 788 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
781 789 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
782 790 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
783 791 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
784 792 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
785 793 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
786 794 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
787 795 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
788 796 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
789 797 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
790 798 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
791 799 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
792 800 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
793 801 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
794 802 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
795 803 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
796 804 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
797 805 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
798 806 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
799 807 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
800 808 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
801 809 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
802 810 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
803 811 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
804 812 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
805 813 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
806 814 5.193936 GTTGTTGTTGTTGTTGTTGTTGTG 58.806 37.500 0.00 0.00 0.00 3.33
807 815 4.433615 TGTTGTTGTTGTTGTTGTTGTGT 58.566 34.783 0.00 0.00 0.00 3.72
808 816 4.268644 TGTTGTTGTTGTTGTTGTTGTGTG 59.731 37.500 0.00 0.00 0.00 3.82
809 817 4.307443 TGTTGTTGTTGTTGTTGTGTGA 57.693 36.364 0.00 0.00 0.00 3.58
810 818 4.045104 TGTTGTTGTTGTTGTTGTGTGAC 58.955 39.130 0.00 0.00 0.00 3.67
811 819 3.990318 TGTTGTTGTTGTTGTGTGACA 57.010 38.095 0.00 0.00 0.00 3.58
812 820 4.307443 TGTTGTTGTTGTTGTGTGACAA 57.693 36.364 0.00 0.00 37.20 3.18
813 821 4.682787 TGTTGTTGTTGTTGTGTGACAAA 58.317 34.783 0.00 0.00 40.15 2.83
814 822 5.109210 TGTTGTTGTTGTTGTGTGACAAAA 58.891 33.333 0.00 0.00 40.15 2.44
815 823 5.580691 TGTTGTTGTTGTTGTGTGACAAAAA 59.419 32.000 0.00 0.00 40.15 1.94
845 853 5.553290 AAAAACGAAATTGGTTGGGTTTG 57.447 34.783 0.00 0.00 35.30 2.93
846 854 2.900716 ACGAAATTGGTTGGGTTTGG 57.099 45.000 0.00 0.00 0.00 3.28
847 855 2.112190 ACGAAATTGGTTGGGTTTGGT 58.888 42.857 0.00 0.00 0.00 3.67
848 856 2.502130 ACGAAATTGGTTGGGTTTGGTT 59.498 40.909 0.00 0.00 0.00 3.67
851 859 4.518249 GAAATTGGTTGGGTTTGGTTTGA 58.482 39.130 0.00 0.00 0.00 2.69
857 865 3.629855 GGTTGGGTTTGGTTTGATTTTGG 59.370 43.478 0.00 0.00 0.00 3.28
863 871 4.158579 GGTTTGGTTTGATTTTGGCCAAAA 59.841 37.500 38.39 38.39 46.54 2.44
880 888 5.923486 CCAAAATTTGGCAAACGAAAAAC 57.077 34.783 16.00 0.00 45.17 2.43
881 889 4.493703 CCAAAATTTGGCAAACGAAAAACG 59.506 37.500 16.00 0.00 45.17 3.60
884 892 5.532025 AATTTGGCAAACGAAAAACGAAA 57.468 30.435 16.00 0.00 45.77 3.46
888 896 2.473609 GGCAAACGAAAAACGAAATCCC 59.526 45.455 0.00 0.00 45.77 3.85
890 898 3.424198 GCAAACGAAAAACGAAATCCCTC 59.576 43.478 0.00 0.00 45.77 4.30
891 899 3.531262 AACGAAAAACGAAATCCCTCG 57.469 42.857 0.00 0.00 45.77 4.63
899 907 2.611974 CGAAATCCCTCGTGTTTTGG 57.388 50.000 0.00 0.00 34.08 3.28
901 909 3.068560 CGAAATCCCTCGTGTTTTGGTA 58.931 45.455 0.00 0.00 34.08 3.25
903 911 4.201783 CGAAATCCCTCGTGTTTTGGTATC 60.202 45.833 0.00 0.00 34.08 2.24
904 912 2.773993 TCCCTCGTGTTTTGGTATCC 57.226 50.000 0.00 0.00 0.00 2.59
905 913 1.066716 TCCCTCGTGTTTTGGTATCCG 60.067 52.381 0.00 0.00 0.00 4.18
906 914 1.338389 CCCTCGTGTTTTGGTATCCGT 60.338 52.381 0.00 0.00 0.00 4.69
907 915 2.419667 CCTCGTGTTTTGGTATCCGTT 58.580 47.619 0.00 0.00 0.00 4.44
908 916 2.809696 CCTCGTGTTTTGGTATCCGTTT 59.190 45.455 0.00 0.00 0.00 3.60
911 919 3.250521 TCGTGTTTTGGTATCCGTTTTCC 59.749 43.478 0.00 0.00 0.00 3.13
912 920 3.251487 CGTGTTTTGGTATCCGTTTTCCT 59.749 43.478 0.00 0.00 0.00 3.36
913 921 4.261280 CGTGTTTTGGTATCCGTTTTCCTT 60.261 41.667 0.00 0.00 0.00 3.36
914 922 4.979815 GTGTTTTGGTATCCGTTTTCCTTG 59.020 41.667 0.00 0.00 0.00 3.61
915 923 4.645588 TGTTTTGGTATCCGTTTTCCTTGT 59.354 37.500 0.00 0.00 0.00 3.16
916 924 5.127356 TGTTTTGGTATCCGTTTTCCTTGTT 59.873 36.000 0.00 0.00 0.00 2.83
917 925 5.855740 TTTGGTATCCGTTTTCCTTGTTT 57.144 34.783 0.00 0.00 0.00 2.83
921 929 4.521639 GGTATCCGTTTTCCTTGTTTCCTT 59.478 41.667 0.00 0.00 0.00 3.36
922 930 4.584327 ATCCGTTTTCCTTGTTTCCTTG 57.416 40.909 0.00 0.00 0.00 3.61
923 931 2.691011 TCCGTTTTCCTTGTTTCCTTGG 59.309 45.455 0.00 0.00 0.00 3.61
924 932 2.469826 CGTTTTCCTTGTTTCCTTGGC 58.530 47.619 0.00 0.00 0.00 4.52
925 933 2.801699 CGTTTTCCTTGTTTCCTTGGCC 60.802 50.000 0.00 0.00 0.00 5.36
926 934 2.434336 GTTTTCCTTGTTTCCTTGGCCT 59.566 45.455 3.32 0.00 0.00 5.19
927 935 1.995376 TTCCTTGTTTCCTTGGCCTC 58.005 50.000 3.32 0.00 0.00 4.70
928 936 0.112412 TCCTTGTTTCCTTGGCCTCC 59.888 55.000 3.32 0.00 0.00 4.30
929 937 0.900182 CCTTGTTTCCTTGGCCTCCC 60.900 60.000 3.32 0.00 0.00 4.30
930 938 1.228429 TTGTTTCCTTGGCCTCCCG 60.228 57.895 3.32 0.00 0.00 5.14
968 987 0.390735 GGCTAGGGTTTCTTTCGCGA 60.391 55.000 3.71 3.71 0.00 5.87
1054 1095 2.267324 GCTGCTTCGGCTTCCTCT 59.733 61.111 0.00 0.00 42.37 3.69
1130 1177 1.152860 TGCTTTTGCCGAGGTCCAA 60.153 52.632 0.00 0.00 46.87 3.53
1377 1424 0.331954 TCTTCCGCTCAGAGGTACCT 59.668 55.000 16.26 16.26 0.00 3.08
1605 2099 3.272574 AGAGTACAATGTGGCCATCAG 57.727 47.619 9.72 1.79 0.00 2.90
1622 2201 1.820519 TCAGAATGGTTCATGGCTTGC 59.179 47.619 0.00 0.00 36.16 4.01
1637 2218 2.928116 GGCTTGCATGAGAGCATTTTTC 59.072 45.455 18.60 1.46 45.19 2.29
1638 2219 3.368116 GGCTTGCATGAGAGCATTTTTCT 60.368 43.478 18.60 0.00 45.19 2.52
1640 2221 4.091509 GCTTGCATGAGAGCATTTTTCTTG 59.908 41.667 13.84 0.00 45.19 3.02
1642 2223 5.204409 TGCATGAGAGCATTTTTCTTGTT 57.796 34.783 0.00 0.00 40.11 2.83
1647 2228 7.359014 GCATGAGAGCATTTTTCTTGTTCTTTC 60.359 37.037 0.00 0.00 35.18 2.62
1650 2231 8.345565 TGAGAGCATTTTTCTTGTTCTTTCTAC 58.654 33.333 0.00 0.00 35.18 2.59
1652 2233 6.749139 AGCATTTTTCTTGTTCTTTCTACCC 58.251 36.000 0.00 0.00 0.00 3.69
1660 2241 7.745620 TCTTGTTCTTTCTACCCTTTGAATC 57.254 36.000 0.00 0.00 0.00 2.52
1663 2244 5.932303 TGTTCTTTCTACCCTTTGAATCGAG 59.068 40.000 0.00 0.00 0.00 4.04
1664 2245 4.504858 TCTTTCTACCCTTTGAATCGAGC 58.495 43.478 0.00 0.00 0.00 5.03
1665 2246 2.579207 TCTACCCTTTGAATCGAGCG 57.421 50.000 0.00 0.00 0.00 5.03
1667 2248 0.461339 TACCCTTTGAATCGAGCGGC 60.461 55.000 0.00 0.00 0.00 6.53
1678 2259 2.309528 TCGAGCGGCATAATCACTTT 57.690 45.000 1.45 0.00 0.00 2.66
1679 2260 1.933181 TCGAGCGGCATAATCACTTTG 59.067 47.619 1.45 0.00 0.00 2.77
1680 2261 1.665679 CGAGCGGCATAATCACTTTGT 59.334 47.619 1.45 0.00 0.00 2.83
1681 2262 2.095853 CGAGCGGCATAATCACTTTGTT 59.904 45.455 1.45 0.00 0.00 2.83
1686 2268 4.494855 GCGGCATAATCACTTTGTTCTCTC 60.495 45.833 0.00 0.00 0.00 3.20
1882 2464 6.092670 CGCTGATTACTTCTCCTTTGATTTCA 59.907 38.462 0.00 0.00 0.00 2.69
1883 2465 7.201679 CGCTGATTACTTCTCCTTTGATTTCAT 60.202 37.037 0.00 0.00 0.00 2.57
1884 2466 8.465201 GCTGATTACTTCTCCTTTGATTTCATT 58.535 33.333 0.00 0.00 0.00 2.57
1886 2468 9.745018 TGATTACTTCTCCTTTGATTTCATTCT 57.255 29.630 0.00 0.00 0.00 2.40
1930 2518 5.937975 AATACCAAAACATCAAGGATGGG 57.062 39.130 10.64 4.82 43.60 4.00
1942 2530 3.007940 TCAAGGATGGGAGGTTATATGCG 59.992 47.826 0.00 0.00 0.00 4.73
1951 2539 4.935808 GGGAGGTTATATGCGATAAAGGTG 59.064 45.833 0.00 0.00 0.00 4.00
2034 2622 6.697892 CGGAACTCTATCTATTTCAGGTGTTC 59.302 42.308 0.00 0.00 0.00 3.18
2151 2741 9.798994 GTATTTCCCTGTATAATACCTATCACG 57.201 37.037 0.00 0.00 31.62 4.35
2199 2789 3.944087 AGTTCTCTGGGAATGTACTTGC 58.056 45.455 0.00 0.00 36.24 4.01
2244 2834 9.445878 AATACTGCATGATCTATCTAACATTGG 57.554 33.333 0.00 0.00 0.00 3.16
2274 2864 6.127535 CCAAGTTGATCATACCTTGCAAATCT 60.128 38.462 18.08 0.00 34.38 2.40
2346 2936 7.287696 ACAGAAGAAATTTATTTGGGAGTGTGT 59.712 33.333 0.00 0.00 0.00 3.72
2400 2992 7.595819 TTCAAGATTACCTGTGACCATTTTT 57.404 32.000 0.00 0.00 0.00 1.94
2409 3001 4.222114 CTGTGACCATTTTTCTTCGCTTC 58.778 43.478 0.00 0.00 0.00 3.86
2647 3243 6.320418 ACCGTATTTGTTTTCCAAGTTCTCTT 59.680 34.615 0.00 0.00 33.75 2.85
2655 3251 8.691661 TGTTTTCCAAGTTCTCTTATTAGCTT 57.308 30.769 0.00 0.00 32.07 3.74
2714 3311 8.859090 TGAAAATGTTGGATCATCCCAATATAC 58.141 33.333 0.00 2.91 46.69 1.47
2819 3416 9.760660 CTTTATTATTCTAACATGGCGCTATTC 57.239 33.333 7.64 0.00 0.00 1.75
2901 3498 2.158475 TCCCATTGGCAGTTCTTGAGTT 60.158 45.455 0.00 0.00 0.00 3.01
3391 4002 0.897621 AGGCAAACATTAGCTTGGGC 59.102 50.000 0.00 0.00 39.06 5.36
3410 4030 5.199723 TGGGCTTTATAATCAATGCTCACA 58.800 37.500 0.00 0.00 34.99 3.58
3483 4103 3.565764 ATAGTATGCTTGCTGCCTTCA 57.434 42.857 0.00 0.00 42.00 3.02
3487 4107 1.030457 ATGCTTGCTGCCTTCATAGC 58.970 50.000 0.00 0.00 42.00 2.97
3498 4118 4.599041 TGCCTTCATAGCAATGTTTAGGT 58.401 39.130 0.00 0.00 37.28 3.08
3499 4119 5.750524 TGCCTTCATAGCAATGTTTAGGTA 58.249 37.500 0.00 0.00 37.28 3.08
3500 4120 5.822519 TGCCTTCATAGCAATGTTTAGGTAG 59.177 40.000 0.00 0.00 37.28 3.18
3501 4121 5.823045 GCCTTCATAGCAATGTTTAGGTAGT 59.177 40.000 0.00 0.00 33.57 2.73
3502 4122 6.318900 GCCTTCATAGCAATGTTTAGGTAGTT 59.681 38.462 0.00 0.00 33.57 2.24
3503 4123 7.148069 GCCTTCATAGCAATGTTTAGGTAGTTT 60.148 37.037 0.00 0.00 33.57 2.66
3504 4124 8.739972 CCTTCATAGCAATGTTTAGGTAGTTTT 58.260 33.333 0.00 0.00 34.50 2.43
3505 4125 9.774742 CTTCATAGCAATGTTTAGGTAGTTTTC 57.225 33.333 0.00 0.00 34.50 2.29
3506 4126 8.856153 TCATAGCAATGTTTAGGTAGTTTTCA 57.144 30.769 0.00 0.00 34.50 2.69
3507 4127 8.946085 TCATAGCAATGTTTAGGTAGTTTTCAG 58.054 33.333 0.00 0.00 34.50 3.02
3509 4129 5.770162 AGCAATGTTTAGGTAGTTTTCAGCT 59.230 36.000 0.00 0.00 0.00 4.24
3510 4130 6.265422 AGCAATGTTTAGGTAGTTTTCAGCTT 59.735 34.615 0.00 0.00 0.00 3.74
3552 4176 4.685924 CTTGGTTGTTGAGTTTCTTGCAT 58.314 39.130 0.00 0.00 0.00 3.96
3586 4210 8.912988 CAGAACCCTATTTAAAGCCAATGATAA 58.087 33.333 0.00 0.00 0.00 1.75
3587 4211 9.487442 AGAACCCTATTTAAAGCCAATGATAAA 57.513 29.630 0.00 0.00 0.00 1.40
3806 4438 8.483307 TCCACCGTTGAATTCTAATTAAGTAC 57.517 34.615 7.05 0.00 0.00 2.73
3852 4484 6.153851 TGGTACATAATGGATCGTCGGAATAT 59.846 38.462 0.00 0.00 0.00 1.28
3866 4498 6.091169 TCGTCGGAATATGTTTCTACCAAAAC 59.909 38.462 0.00 0.00 39.16 2.43
3869 4501 8.938906 GTCGGAATATGTTTCTACCAAAACTTA 58.061 33.333 1.73 0.66 39.39 2.24
3934 4829 4.764823 TGTTGATGTTTCATGTTCCCCTAC 59.235 41.667 0.00 0.00 0.00 3.18
3991 4888 1.666888 GGTTCTGGCTGTTCATTTGCG 60.667 52.381 0.00 0.00 0.00 4.85
4274 5186 5.241506 TGGGCTTCACAATTTGTTCTTCTAG 59.758 40.000 0.00 0.00 0.00 2.43
4289 5201 9.784531 TTGTTCTTCTAGAAAATCTGAGATTGT 57.215 29.630 8.68 2.40 35.75 2.71
4348 5260 5.414454 TGGGAATTTTGAACATTAGTCGAGG 59.586 40.000 0.00 0.00 0.00 4.63
4400 5313 8.536340 TGTAAACCATTTTTAGTAGGGTTGTT 57.464 30.769 0.00 0.00 40.77 2.83
4561 5474 1.828595 TGAGTTATAGAAGGCGGCACA 59.171 47.619 13.08 0.00 0.00 4.57
4566 5479 0.253044 ATAGAAGGCGGCACACACAT 59.747 50.000 13.08 0.00 0.00 3.21
4584 5497 2.558359 ACATTCAGCCAGTTACCAAAGC 59.442 45.455 0.00 0.00 0.00 3.51
4624 5537 6.493189 ACACCAGTGGTTTTTGGAATATTT 57.507 33.333 13.62 0.00 37.89 1.40
4729 5642 3.132111 ACAACTGTAAGCAACAAAAGGGG 59.868 43.478 0.00 0.00 37.74 4.79
4762 5675 7.145323 GTGGGTGTGATGCCAATAAATATAAC 58.855 38.462 0.00 0.00 0.00 1.89
4833 5746 1.256812 ACAATTTTCCGCCTCCCTTG 58.743 50.000 0.00 0.00 0.00 3.61
4909 5822 2.564771 ACCCTGTATTGCATGATCACG 58.435 47.619 0.00 0.00 0.00 4.35
4982 5895 5.521372 GTGCGAAATATACGTTACTCCCTTT 59.479 40.000 0.00 0.00 0.00 3.11
5000 5913 3.435671 CCTTTTCAGTTTACCTACCGCAG 59.564 47.826 0.00 0.00 0.00 5.18
5104 6017 0.461548 CCGACTTGATGCAGAGGCTA 59.538 55.000 0.00 0.00 41.91 3.93
5162 6078 3.294214 GCAATCATCCAATCTGGGTCTT 58.706 45.455 0.00 0.00 38.32 3.01
5205 6121 3.065019 CTGTGTTAACAGTGGTGTTGC 57.935 47.619 8.98 0.00 46.75 4.17
5253 6169 4.175337 TATGACCCTGCAGGCCGC 62.175 66.667 28.39 17.83 40.58 6.53
5337 6253 1.750341 TTCGGTCGCAGGAACAGGAA 61.750 55.000 0.00 0.00 0.00 3.36
5475 6398 4.570930 TCTTTGTGTTTTGGTTTTGGGTC 58.429 39.130 0.00 0.00 0.00 4.46
5493 6416 1.134670 GTCCAGAATAGAGCGCCAGTT 60.135 52.381 2.29 0.00 0.00 3.16
5595 6519 7.129457 TCCAATATAGTGAGAAAGCAGATGT 57.871 36.000 0.79 0.00 0.00 3.06
5827 6758 7.535997 GCGTTCCCTTTCACTAGAAAATAATT 58.464 34.615 0.00 0.00 42.78 1.40
5894 6825 6.978080 ACAAATCAAAATGTGGTAACTGTGTC 59.022 34.615 0.00 0.00 37.61 3.67
5967 6899 6.760770 TGGAAATCCAAGTTCAAACACAAATC 59.239 34.615 0.00 0.00 44.35 2.17
6006 6938 0.116342 TAGTGGCTCACTTCCTGGGA 59.884 55.000 12.22 0.00 42.59 4.37
6014 6946 0.890683 CACTTCCTGGGATTGGCAAC 59.109 55.000 0.00 0.00 0.00 4.17
6076 7008 8.988546 ATAAATAATACAGTACACAATGGGCA 57.011 30.769 0.00 0.00 0.00 5.36
6144 7384 6.036517 GGCAATATAGCTGCACATACATAGAC 59.963 42.308 1.02 0.00 41.78 2.59
6157 7397 7.428826 CACATACATAGACAATACAGCAGAGA 58.571 38.462 0.00 0.00 0.00 3.10
6204 7448 4.901197 TTGCCTGAGACATACACCTAAA 57.099 40.909 0.00 0.00 0.00 1.85
6243 7498 9.851686 AGTTTTCATTGTGGCATAGATAGATAA 57.148 29.630 0.00 0.00 0.00 1.75
6344 7649 9.911788 AGGGACAAATATATAGGAATGCTATTG 57.088 33.333 0.00 0.00 0.00 1.90
6345 7650 8.624776 GGGACAAATATATAGGAATGCTATTGC 58.375 37.037 0.00 0.00 40.20 3.56
6348 7653 9.182214 ACAAATATATAGGAATGCTATTGCCTG 57.818 33.333 0.00 0.00 38.71 4.85
6349 7654 7.814264 AATATATAGGAATGCTATTGCCTGC 57.186 36.000 0.00 0.00 38.71 4.85
6350 7655 3.803186 ATAGGAATGCTATTGCCTGCT 57.197 42.857 0.00 0.00 38.71 4.24
6351 7656 1.978454 AGGAATGCTATTGCCTGCTC 58.022 50.000 0.00 0.00 38.71 4.26
6352 7657 1.213678 AGGAATGCTATTGCCTGCTCA 59.786 47.619 0.00 0.00 38.71 4.26
6353 7658 2.026641 GGAATGCTATTGCCTGCTCAA 58.973 47.619 0.00 0.00 38.71 3.02
6354 7659 2.428171 GGAATGCTATTGCCTGCTCAAA 59.572 45.455 0.00 0.00 38.71 2.69
6355 7660 3.119029 GGAATGCTATTGCCTGCTCAAAA 60.119 43.478 0.00 0.00 38.71 2.44
6356 7661 4.497300 GAATGCTATTGCCTGCTCAAAAA 58.503 39.130 0.00 0.00 38.71 1.94
6357 7662 4.748277 ATGCTATTGCCTGCTCAAAAAT 57.252 36.364 0.00 0.00 38.71 1.82
6358 7663 5.857471 ATGCTATTGCCTGCTCAAAAATA 57.143 34.783 0.00 0.00 38.71 1.40
6359 7664 5.657826 TGCTATTGCCTGCTCAAAAATAA 57.342 34.783 0.00 0.00 38.71 1.40
6360 7665 5.410067 TGCTATTGCCTGCTCAAAAATAAC 58.590 37.500 0.00 0.00 38.71 1.89
6361 7666 5.047448 TGCTATTGCCTGCTCAAAAATAACA 60.047 36.000 0.00 0.00 38.71 2.41
6362 7667 5.868801 GCTATTGCCTGCTCAAAAATAACAA 59.131 36.000 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 4.950205 ACTCTCTCTTTTTACCCGAACA 57.050 40.909 0.00 0.00 0.00 3.18
107 108 1.545136 CATGGTACATGGCAAACTGCA 59.455 47.619 0.00 0.00 45.75 4.41
178 183 1.098050 CCCTAGTGTGATTGCAAGCC 58.902 55.000 12.94 4.23 0.00 4.35
284 289 1.060163 ACAAGGGCTAGTGTGTGGGT 61.060 55.000 0.00 0.00 0.00 4.51
294 299 1.005037 CAGTCACGCACAAGGGCTA 60.005 57.895 0.00 0.00 0.00 3.93
319 325 0.036164 TTAGCAGTTCGCCCACACAT 59.964 50.000 0.00 0.00 44.04 3.21
373 379 1.888436 GAGAGGTCGCCCACACATCA 61.888 60.000 0.00 0.00 0.00 3.07
410 418 8.065473 TGATTTTGTATGCCATGTAGAACAAT 57.935 30.769 0.00 0.00 0.00 2.71
415 423 5.439721 AGCTGATTTTGTATGCCATGTAGA 58.560 37.500 0.00 0.00 0.00 2.59
443 451 0.250252 TCTGCACGAATCTTGGCACA 60.250 50.000 0.00 0.00 32.06 4.57
475 483 0.250234 CACCCACACGTCTCCATCAT 59.750 55.000 0.00 0.00 0.00 2.45
501 509 2.015382 CACACGTGTGGGCGTTAAA 58.985 52.632 35.65 0.00 43.83 1.52
502 510 3.720531 CACACGTGTGGGCGTTAA 58.279 55.556 35.65 0.00 43.83 2.01
542 550 3.306472 ACTCTAGTGGTTGCCCAAAAA 57.694 42.857 0.00 0.00 44.15 1.94
543 551 2.955660 CAACTCTAGTGGTTGCCCAAAA 59.044 45.455 14.58 0.00 44.15 2.44
544 552 2.173782 TCAACTCTAGTGGTTGCCCAAA 59.826 45.455 19.06 6.23 44.15 3.28
545 553 1.771854 TCAACTCTAGTGGTTGCCCAA 59.228 47.619 19.06 6.48 44.15 4.12
546 554 1.429930 TCAACTCTAGTGGTTGCCCA 58.570 50.000 19.06 6.73 42.40 5.36
547 555 2.359900 CATCAACTCTAGTGGTTGCCC 58.640 52.381 19.06 0.00 42.40 5.36
548 556 1.740025 GCATCAACTCTAGTGGTTGCC 59.260 52.381 19.06 10.72 42.40 4.52
549 557 2.426522 TGCATCAACTCTAGTGGTTGC 58.573 47.619 19.06 11.91 42.29 4.17
550 558 5.633830 ATTTGCATCAACTCTAGTGGTTG 57.366 39.130 18.31 18.31 43.57 3.77
551 559 6.714810 TGTAATTTGCATCAACTCTAGTGGTT 59.285 34.615 0.00 0.00 0.00 3.67
552 560 6.237901 TGTAATTTGCATCAACTCTAGTGGT 58.762 36.000 0.00 0.00 0.00 4.16
553 561 6.741992 TGTAATTTGCATCAACTCTAGTGG 57.258 37.500 0.00 0.00 0.00 4.00
554 562 8.239314 ACATTGTAATTTGCATCAACTCTAGTG 58.761 33.333 0.00 0.00 0.00 2.74
555 563 8.340618 ACATTGTAATTTGCATCAACTCTAGT 57.659 30.769 0.00 0.00 0.00 2.57
593 601 4.576873 TGAGCTAAAAACGATGTTCCAACA 59.423 37.500 0.00 0.00 44.06 3.33
594 602 5.049680 TCTGAGCTAAAAACGATGTTCCAAC 60.050 40.000 0.00 0.00 0.00 3.77
595 603 5.060506 TCTGAGCTAAAAACGATGTTCCAA 58.939 37.500 0.00 0.00 0.00 3.53
596 604 4.637276 TCTGAGCTAAAAACGATGTTCCA 58.363 39.130 0.00 0.00 0.00 3.53
597 605 4.691216 ACTCTGAGCTAAAAACGATGTTCC 59.309 41.667 4.19 0.00 0.00 3.62
598 606 5.847670 ACTCTGAGCTAAAAACGATGTTC 57.152 39.130 4.19 0.00 0.00 3.18
599 607 5.758296 TGAACTCTGAGCTAAAAACGATGTT 59.242 36.000 4.19 0.00 0.00 2.71
600 608 5.177696 GTGAACTCTGAGCTAAAAACGATGT 59.822 40.000 4.19 0.00 0.00 3.06
601 609 5.406780 AGTGAACTCTGAGCTAAAAACGATG 59.593 40.000 4.19 0.00 0.00 3.84
602 610 5.542779 AGTGAACTCTGAGCTAAAAACGAT 58.457 37.500 4.19 0.00 0.00 3.73
603 611 4.945246 AGTGAACTCTGAGCTAAAAACGA 58.055 39.130 4.19 0.00 0.00 3.85
604 612 4.745125 TGAGTGAACTCTGAGCTAAAAACG 59.255 41.667 11.55 0.00 43.25 3.60
605 613 6.037172 TGTTGAGTGAACTCTGAGCTAAAAAC 59.963 38.462 11.55 5.16 43.25 2.43
606 614 6.112734 TGTTGAGTGAACTCTGAGCTAAAAA 58.887 36.000 11.55 0.00 43.25 1.94
607 615 5.670485 TGTTGAGTGAACTCTGAGCTAAAA 58.330 37.500 11.55 0.00 43.25 1.52
608 616 5.276461 TGTTGAGTGAACTCTGAGCTAAA 57.724 39.130 11.55 0.00 43.25 1.85
609 617 4.937201 TGTTGAGTGAACTCTGAGCTAA 57.063 40.909 11.55 0.00 43.25 3.09
610 618 4.342378 AGTTGTTGAGTGAACTCTGAGCTA 59.658 41.667 11.55 0.00 43.25 3.32
611 619 3.133721 AGTTGTTGAGTGAACTCTGAGCT 59.866 43.478 11.55 0.00 43.25 4.09
612 620 3.462021 AGTTGTTGAGTGAACTCTGAGC 58.538 45.455 11.55 0.00 43.25 4.26
613 621 7.721286 AATTAGTTGTTGAGTGAACTCTGAG 57.279 36.000 11.55 2.45 43.25 3.35
614 622 7.872993 CCTAATTAGTTGTTGAGTGAACTCTGA 59.127 37.037 11.50 0.00 43.25 3.27
615 623 7.360438 GCCTAATTAGTTGTTGAGTGAACTCTG 60.360 40.741 11.50 0.00 43.25 3.35
616 624 6.651225 GCCTAATTAGTTGTTGAGTGAACTCT 59.349 38.462 11.50 0.00 43.25 3.24
617 625 6.426937 TGCCTAATTAGTTGTTGAGTGAACTC 59.573 38.462 11.50 3.41 43.15 3.01
618 626 6.204882 GTGCCTAATTAGTTGTTGAGTGAACT 59.795 38.462 11.50 0.00 35.37 3.01
619 627 6.371389 GTGCCTAATTAGTTGTTGAGTGAAC 58.629 40.000 11.50 0.00 34.84 3.18
620 628 5.178623 CGTGCCTAATTAGTTGTTGAGTGAA 59.821 40.000 11.50 0.00 0.00 3.18
621 629 4.688879 CGTGCCTAATTAGTTGTTGAGTGA 59.311 41.667 11.50 0.00 0.00 3.41
622 630 4.688879 TCGTGCCTAATTAGTTGTTGAGTG 59.311 41.667 11.50 0.00 0.00 3.51
623 631 4.689345 GTCGTGCCTAATTAGTTGTTGAGT 59.311 41.667 11.50 0.00 0.00 3.41
624 632 4.201589 CGTCGTGCCTAATTAGTTGTTGAG 60.202 45.833 11.50 0.00 0.00 3.02
625 633 3.676172 CGTCGTGCCTAATTAGTTGTTGA 59.324 43.478 11.50 0.57 0.00 3.18
626 634 3.676172 TCGTCGTGCCTAATTAGTTGTTG 59.324 43.478 11.50 0.00 0.00 3.33
627 635 3.676646 GTCGTCGTGCCTAATTAGTTGTT 59.323 43.478 11.50 0.00 0.00 2.83
628 636 3.248266 GTCGTCGTGCCTAATTAGTTGT 58.752 45.455 11.50 0.00 0.00 3.32
629 637 3.247442 TGTCGTCGTGCCTAATTAGTTG 58.753 45.455 11.50 0.00 0.00 3.16
630 638 3.581024 TGTCGTCGTGCCTAATTAGTT 57.419 42.857 11.50 0.00 0.00 2.24
631 639 3.795623 ATGTCGTCGTGCCTAATTAGT 57.204 42.857 11.50 0.00 0.00 2.24
632 640 5.059343 CGAATATGTCGTCGTGCCTAATTAG 59.941 44.000 5.43 5.43 45.09 1.73
633 641 4.913345 CGAATATGTCGTCGTGCCTAATTA 59.087 41.667 0.00 0.00 45.09 1.40
634 642 3.734231 CGAATATGTCGTCGTGCCTAATT 59.266 43.478 0.00 0.00 45.09 1.40
635 643 3.305964 CGAATATGTCGTCGTGCCTAAT 58.694 45.455 0.00 0.00 45.09 1.73
636 644 2.723209 CGAATATGTCGTCGTGCCTAA 58.277 47.619 0.00 0.00 45.09 2.69
637 645 2.394545 CGAATATGTCGTCGTGCCTA 57.605 50.000 0.00 0.00 45.09 3.93
638 646 3.251817 CGAATATGTCGTCGTGCCT 57.748 52.632 0.00 0.00 45.09 4.75
647 655 8.742554 AATTGAACTTTTGAACCGAATATGTC 57.257 30.769 0.00 0.00 0.00 3.06
648 656 9.620660 GTAATTGAACTTTTGAACCGAATATGT 57.379 29.630 0.00 0.00 0.00 2.29
649 657 9.840427 AGTAATTGAACTTTTGAACCGAATATG 57.160 29.630 0.00 0.00 0.00 1.78
652 660 9.840427 CATAGTAATTGAACTTTTGAACCGAAT 57.160 29.630 0.00 0.00 0.00 3.34
653 661 8.842280 ACATAGTAATTGAACTTTTGAACCGAA 58.158 29.630 0.00 0.00 0.00 4.30
654 662 8.385898 ACATAGTAATTGAACTTTTGAACCGA 57.614 30.769 0.00 0.00 0.00 4.69
655 663 9.113876 GAACATAGTAATTGAACTTTTGAACCG 57.886 33.333 0.00 0.00 0.00 4.44
664 672 9.739276 TGGAATGAAGAACATAGTAATTGAACT 57.261 29.630 0.00 0.00 38.38 3.01
671 679 9.638239 GCAAAATTGGAATGAAGAACATAGTAA 57.362 29.630 0.00 0.00 38.38 2.24
672 680 8.801299 TGCAAAATTGGAATGAAGAACATAGTA 58.199 29.630 0.00 0.00 38.38 1.82
673 681 7.669427 TGCAAAATTGGAATGAAGAACATAGT 58.331 30.769 0.00 0.00 38.38 2.12
674 682 8.712285 ATGCAAAATTGGAATGAAGAACATAG 57.288 30.769 0.00 0.00 38.38 2.23
675 683 9.153721 GAATGCAAAATTGGAATGAAGAACATA 57.846 29.630 0.00 0.00 38.38 2.29
676 684 7.148540 CGAATGCAAAATTGGAATGAAGAACAT 60.149 33.333 0.00 0.00 41.45 2.71
677 685 6.145858 CGAATGCAAAATTGGAATGAAGAACA 59.854 34.615 0.00 0.00 30.51 3.18
678 686 6.146021 ACGAATGCAAAATTGGAATGAAGAAC 59.854 34.615 0.00 0.00 30.51 3.01
679 687 6.222389 ACGAATGCAAAATTGGAATGAAGAA 58.778 32.000 0.00 0.00 30.51 2.52
680 688 5.782047 ACGAATGCAAAATTGGAATGAAGA 58.218 33.333 0.00 0.00 30.51 2.87
681 689 6.145858 TGAACGAATGCAAAATTGGAATGAAG 59.854 34.615 0.00 0.00 30.51 3.02
682 690 5.987953 TGAACGAATGCAAAATTGGAATGAA 59.012 32.000 0.00 0.00 30.51 2.57
683 691 5.536260 TGAACGAATGCAAAATTGGAATGA 58.464 33.333 0.00 0.00 30.51 2.57
684 692 5.842619 TGAACGAATGCAAAATTGGAATG 57.157 34.783 0.00 0.00 30.51 2.67
685 693 6.649973 TGAATGAACGAATGCAAAATTGGAAT 59.350 30.769 0.00 0.00 30.51 3.01
686 694 5.987953 TGAATGAACGAATGCAAAATTGGAA 59.012 32.000 0.00 0.00 30.51 3.53
687 695 5.536260 TGAATGAACGAATGCAAAATTGGA 58.464 33.333 0.00 0.00 0.00 3.53
688 696 5.842619 TGAATGAACGAATGCAAAATTGG 57.157 34.783 0.00 0.00 0.00 3.16
689 697 7.511463 TGAATGAATGAACGAATGCAAAATTG 58.489 30.769 0.00 0.00 0.00 2.32
690 698 7.655236 TGAATGAATGAACGAATGCAAAATT 57.345 28.000 0.00 0.00 0.00 1.82
691 699 7.837202 ATGAATGAATGAACGAATGCAAAAT 57.163 28.000 0.00 0.00 0.00 1.82
692 700 7.384387 TGAATGAATGAATGAACGAATGCAAAA 59.616 29.630 0.00 0.00 0.00 2.44
693 701 6.867293 TGAATGAATGAATGAACGAATGCAAA 59.133 30.769 0.00 0.00 0.00 3.68
694 702 6.388278 TGAATGAATGAATGAACGAATGCAA 58.612 32.000 0.00 0.00 0.00 4.08
695 703 5.952033 TGAATGAATGAATGAACGAATGCA 58.048 33.333 0.00 0.00 0.00 3.96
696 704 6.074516 CCATGAATGAATGAATGAACGAATGC 60.075 38.462 0.00 0.00 0.00 3.56
697 705 6.074516 GCCATGAATGAATGAATGAACGAATG 60.075 38.462 0.00 0.00 0.00 2.67
698 706 5.981315 GCCATGAATGAATGAATGAACGAAT 59.019 36.000 0.00 0.00 0.00 3.34
699 707 5.342433 GCCATGAATGAATGAATGAACGAA 58.658 37.500 0.00 0.00 0.00 3.85
700 708 4.202040 GGCCATGAATGAATGAATGAACGA 60.202 41.667 0.00 0.00 0.00 3.85
701 709 4.046462 GGCCATGAATGAATGAATGAACG 58.954 43.478 0.00 0.00 0.00 3.95
702 710 5.272283 AGGCCATGAATGAATGAATGAAC 57.728 39.130 5.01 0.00 0.00 3.18
703 711 5.188163 ACAAGGCCATGAATGAATGAATGAA 59.812 36.000 16.33 0.00 0.00 2.57
704 712 4.712829 ACAAGGCCATGAATGAATGAATGA 59.287 37.500 16.33 0.00 0.00 2.57
705 713 5.018539 ACAAGGCCATGAATGAATGAATG 57.981 39.130 16.33 0.00 0.00 2.67
706 714 5.046159 ACAACAAGGCCATGAATGAATGAAT 60.046 36.000 16.33 0.00 0.00 2.57
707 715 4.283978 ACAACAAGGCCATGAATGAATGAA 59.716 37.500 16.33 0.00 0.00 2.57
708 716 3.833650 ACAACAAGGCCATGAATGAATGA 59.166 39.130 16.33 0.00 0.00 2.57
709 717 4.196626 ACAACAAGGCCATGAATGAATG 57.803 40.909 16.33 6.11 0.00 2.67
710 718 4.040706 ACAACAACAAGGCCATGAATGAAT 59.959 37.500 16.33 5.58 0.00 2.57
711 719 3.387374 ACAACAACAAGGCCATGAATGAA 59.613 39.130 16.33 0.00 0.00 2.57
712 720 2.964464 ACAACAACAAGGCCATGAATGA 59.036 40.909 16.33 0.00 0.00 2.57
713 721 3.389925 ACAACAACAAGGCCATGAATG 57.610 42.857 16.33 14.96 0.00 2.67
714 722 3.134442 ACAACAACAACAAGGCCATGAAT 59.866 39.130 16.33 0.00 0.00 2.57
715 723 2.499289 ACAACAACAACAAGGCCATGAA 59.501 40.909 16.33 0.00 0.00 2.57
716 724 2.106566 ACAACAACAACAAGGCCATGA 58.893 42.857 16.33 0.00 0.00 3.07
717 725 2.600470 ACAACAACAACAAGGCCATG 57.400 45.000 5.01 5.77 0.00 3.66
718 726 2.235898 ACAACAACAACAACAAGGCCAT 59.764 40.909 5.01 0.00 0.00 4.40
719 727 1.620819 ACAACAACAACAACAAGGCCA 59.379 42.857 5.01 0.00 0.00 5.36
720 728 2.378445 ACAACAACAACAACAAGGCC 57.622 45.000 0.00 0.00 0.00 5.19
721 729 3.063485 ACAACAACAACAACAACAAGGC 58.937 40.909 0.00 0.00 0.00 4.35
722 730 4.509600 ACAACAACAACAACAACAACAAGG 59.490 37.500 0.00 0.00 0.00 3.61
723 731 5.649602 ACAACAACAACAACAACAACAAG 57.350 34.783 0.00 0.00 0.00 3.16
724 732 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
725 733 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
726 734 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
727 735 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
728 736 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
729 737 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
730 738 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
731 739 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
732 740 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
733 741 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
734 742 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
735 743 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
736 744 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
737 745 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
738 746 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
739 747 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
740 748 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
741 749 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
742 750 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
743 751 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
744 752 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
745 753 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
746 754 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
747 755 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
748 756 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
749 757 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
750 758 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
751 759 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
752 760 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
753 761 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
754 762 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
755 763 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
756 764 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
757 765 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
758 766 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
759 767 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
760 768 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
761 769 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
762 770 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
763 771 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
764 772 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
765 773 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
766 774 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
767 775 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
768 776 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
769 777 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
770 778 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
771 779 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
772 780 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
773 781 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
774 782 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
775 783 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
776 784 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
777 785 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
778 786 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
779 787 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
780 788 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
781 789 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
782 790 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
783 791 5.193936 CACAACAACAACAACAACAACAAC 58.806 37.500 0.00 0.00 0.00 3.32
784 792 4.870426 ACACAACAACAACAACAACAACAA 59.130 33.333 0.00 0.00 0.00 2.83
785 793 4.268644 CACACAACAACAACAACAACAACA 59.731 37.500 0.00 0.00 0.00 3.33
786 794 4.504461 TCACACAACAACAACAACAACAAC 59.496 37.500 0.00 0.00 0.00 3.32
787 795 4.504461 GTCACACAACAACAACAACAACAA 59.496 37.500 0.00 0.00 0.00 2.83
788 796 4.045104 GTCACACAACAACAACAACAACA 58.955 39.130 0.00 0.00 0.00 3.33
789 797 4.045104 TGTCACACAACAACAACAACAAC 58.955 39.130 0.00 0.00 0.00 3.32
790 798 4.307443 TGTCACACAACAACAACAACAA 57.693 36.364 0.00 0.00 0.00 2.83
791 799 3.990318 TGTCACACAACAACAACAACA 57.010 38.095 0.00 0.00 0.00 3.33
792 800 5.643339 TTTTGTCACACAACAACAACAAC 57.357 34.783 0.00 0.00 37.90 3.32
793 801 6.037423 GTTTTTGTCACACAACAACAACAA 57.963 33.333 11.68 0.00 44.06 2.83
794 802 5.643339 GTTTTTGTCACACAACAACAACA 57.357 34.783 11.68 0.00 44.06 3.33
798 806 9.651718 TTTTATTTGTTTTTGTCACACAACAAC 57.348 25.926 12.28 10.22 44.57 3.32
823 831 4.396478 CCAAACCCAACCAATTTCGTTTTT 59.604 37.500 0.00 0.00 0.00 1.94
824 832 3.942115 CCAAACCCAACCAATTTCGTTTT 59.058 39.130 0.00 0.00 0.00 2.43
825 833 3.055021 ACCAAACCCAACCAATTTCGTTT 60.055 39.130 0.00 0.00 0.00 3.60
826 834 2.502130 ACCAAACCCAACCAATTTCGTT 59.498 40.909 0.00 0.00 0.00 3.85
827 835 2.112190 ACCAAACCCAACCAATTTCGT 58.888 42.857 0.00 0.00 0.00 3.85
828 836 2.900716 ACCAAACCCAACCAATTTCG 57.099 45.000 0.00 0.00 0.00 3.46
829 837 4.518249 TCAAACCAAACCCAACCAATTTC 58.482 39.130 0.00 0.00 0.00 2.17
830 838 4.576330 TCAAACCAAACCCAACCAATTT 57.424 36.364 0.00 0.00 0.00 1.82
831 839 4.787135 ATCAAACCAAACCCAACCAATT 57.213 36.364 0.00 0.00 0.00 2.32
832 840 4.787135 AATCAAACCAAACCCAACCAAT 57.213 36.364 0.00 0.00 0.00 3.16
833 841 4.576330 AAATCAAACCAAACCCAACCAA 57.424 36.364 0.00 0.00 0.00 3.67
834 842 4.265073 CAAAATCAAACCAAACCCAACCA 58.735 39.130 0.00 0.00 0.00 3.67
835 843 3.629855 CCAAAATCAAACCAAACCCAACC 59.370 43.478 0.00 0.00 0.00 3.77
836 844 3.066064 GCCAAAATCAAACCAAACCCAAC 59.934 43.478 0.00 0.00 0.00 3.77
837 845 3.282885 GCCAAAATCAAACCAAACCCAA 58.717 40.909 0.00 0.00 0.00 4.12
838 846 2.422093 GGCCAAAATCAAACCAAACCCA 60.422 45.455 0.00 0.00 0.00 4.51
839 847 2.226330 GGCCAAAATCAAACCAAACCC 58.774 47.619 0.00 0.00 0.00 4.11
840 848 2.924421 TGGCCAAAATCAAACCAAACC 58.076 42.857 0.61 0.00 0.00 3.27
841 849 4.972514 TTTGGCCAAAATCAAACCAAAC 57.027 36.364 28.57 0.00 43.53 2.93
842 850 6.535963 AATTTTGGCCAAAATCAAACCAAA 57.464 29.167 42.12 22.01 46.76 3.28
843 851 6.335777 CAAATTTTGGCCAAAATCAAACCAA 58.664 32.000 42.12 22.67 46.76 3.67
844 852 5.163478 CCAAATTTTGGCCAAAATCAAACCA 60.163 36.000 42.12 23.32 46.76 3.67
845 853 5.288015 CCAAATTTTGGCCAAAATCAAACC 58.712 37.500 42.12 0.00 46.76 3.27
863 871 5.277106 GGATTTCGTTTTTCGTTTGCCAAAT 60.277 36.000 0.00 0.00 40.80 2.32
880 888 1.877443 ACCAAAACACGAGGGATTTCG 59.123 47.619 0.00 0.00 45.70 3.46
881 889 4.095932 GGATACCAAAACACGAGGGATTTC 59.904 45.833 0.00 0.00 0.00 2.17
884 892 2.419574 CGGATACCAAAACACGAGGGAT 60.420 50.000 0.00 0.00 0.00 3.85
888 896 4.460505 GAAAACGGATACCAAAACACGAG 58.539 43.478 0.00 0.00 0.00 4.18
890 898 3.251487 AGGAAAACGGATACCAAAACACG 59.749 43.478 0.00 0.00 0.00 4.49
891 899 4.841443 AGGAAAACGGATACCAAAACAC 57.159 40.909 0.00 0.00 0.00 3.32
892 900 4.645588 ACAAGGAAAACGGATACCAAAACA 59.354 37.500 0.00 0.00 0.00 2.83
893 901 5.190992 ACAAGGAAAACGGATACCAAAAC 57.809 39.130 0.00 0.00 0.00 2.43
896 904 4.278919 GGAAACAAGGAAAACGGATACCAA 59.721 41.667 0.00 0.00 0.00 3.67
897 905 3.822167 GGAAACAAGGAAAACGGATACCA 59.178 43.478 0.00 0.00 0.00 3.25
898 906 4.077108 AGGAAACAAGGAAAACGGATACC 58.923 43.478 0.00 0.00 0.00 2.73
899 907 5.458015 CAAGGAAACAAGGAAAACGGATAC 58.542 41.667 0.00 0.00 0.00 2.24
901 909 3.320826 CCAAGGAAACAAGGAAAACGGAT 59.679 43.478 0.00 0.00 0.00 4.18
903 911 2.801699 GCCAAGGAAACAAGGAAAACGG 60.802 50.000 0.00 0.00 0.00 4.44
904 912 2.469826 GCCAAGGAAACAAGGAAAACG 58.530 47.619 0.00 0.00 0.00 3.60
905 913 2.434336 AGGCCAAGGAAACAAGGAAAAC 59.566 45.455 5.01 0.00 0.00 2.43
906 914 2.698274 GAGGCCAAGGAAACAAGGAAAA 59.302 45.455 5.01 0.00 0.00 2.29
907 915 2.316108 GAGGCCAAGGAAACAAGGAAA 58.684 47.619 5.01 0.00 0.00 3.13
908 916 1.480498 GGAGGCCAAGGAAACAAGGAA 60.480 52.381 5.01 0.00 0.00 3.36
911 919 1.244019 CGGGAGGCCAAGGAAACAAG 61.244 60.000 5.01 0.00 0.00 3.16
912 920 1.228429 CGGGAGGCCAAGGAAACAA 60.228 57.895 5.01 0.00 0.00 2.83
913 921 2.406002 GACGGGAGGCCAAGGAAACA 62.406 60.000 5.01 0.00 0.00 2.83
914 922 1.674651 GACGGGAGGCCAAGGAAAC 60.675 63.158 5.01 0.00 0.00 2.78
915 923 2.754375 GACGGGAGGCCAAGGAAA 59.246 61.111 5.01 0.00 0.00 3.13
1032 1073 3.036783 GAAGCCGAAGCAGCTGCAG 62.037 63.158 38.24 27.25 45.16 4.41
1033 1074 3.052082 GAAGCCGAAGCAGCTGCA 61.052 61.111 38.24 0.00 45.16 4.41
1054 1095 4.966787 GCGGTGGGGTTGCTTCCA 62.967 66.667 0.76 0.00 0.00 3.53
1377 1424 2.119495 GTAATGAGCTGAAGGGAGGGA 58.881 52.381 0.00 0.00 0.00 4.20
1508 1555 2.351455 TGCTTGTTTCACAACGACTCA 58.649 42.857 0.00 0.00 33.96 3.41
1605 2099 2.973694 ATGCAAGCCATGAACCATTC 57.026 45.000 0.00 0.00 31.48 2.67
1622 2201 7.866393 AGAAAGAACAAGAAAAATGCTCTCATG 59.134 33.333 0.00 0.00 32.23 3.07
1637 2218 6.426937 TCGATTCAAAGGGTAGAAAGAACAAG 59.573 38.462 0.00 0.00 0.00 3.16
1638 2219 6.292923 TCGATTCAAAGGGTAGAAAGAACAA 58.707 36.000 0.00 0.00 0.00 2.83
1640 2221 5.163844 GCTCGATTCAAAGGGTAGAAAGAAC 60.164 44.000 0.00 0.00 0.00 3.01
1642 2223 4.504858 GCTCGATTCAAAGGGTAGAAAGA 58.495 43.478 0.00 0.00 0.00 2.52
1647 2228 1.571919 CCGCTCGATTCAAAGGGTAG 58.428 55.000 0.00 0.00 0.00 3.18
1650 2231 1.097547 ATGCCGCTCGATTCAAAGGG 61.098 55.000 0.00 0.00 0.00 3.95
1652 2233 3.248363 TGATTATGCCGCTCGATTCAAAG 59.752 43.478 0.00 0.00 0.00 2.77
1660 2241 1.665679 ACAAAGTGATTATGCCGCTCG 59.334 47.619 0.00 0.00 0.00 5.03
1663 2244 3.375299 AGAGAACAAAGTGATTATGCCGC 59.625 43.478 0.00 0.00 0.00 6.53
1664 2245 4.034510 GGAGAGAACAAAGTGATTATGCCG 59.965 45.833 0.00 0.00 0.00 5.69
1665 2246 5.189180 AGGAGAGAACAAAGTGATTATGCC 58.811 41.667 0.00 0.00 0.00 4.40
1667 2248 6.648192 AGGAGGAGAGAACAAAGTGATTATG 58.352 40.000 0.00 0.00 0.00 1.90
1678 2259 1.774254 TGCCAAAAGGAGGAGAGAACA 59.226 47.619 0.00 0.00 0.00 3.18
1679 2260 2.568623 TGCCAAAAGGAGGAGAGAAC 57.431 50.000 0.00 0.00 0.00 3.01
1680 2261 3.424703 CAATGCCAAAAGGAGGAGAGAA 58.575 45.455 0.00 0.00 0.00 2.87
1681 2262 2.881403 GCAATGCCAAAAGGAGGAGAGA 60.881 50.000 0.00 0.00 0.00 3.10
1914 2502 3.833559 ACCTCCCATCCTTGATGTTTT 57.166 42.857 3.62 0.00 38.28 2.43
1927 2515 4.595781 ACCTTTATCGCATATAACCTCCCA 59.404 41.667 0.00 0.00 0.00 4.37
1930 2518 7.907214 AATCACCTTTATCGCATATAACCTC 57.093 36.000 0.00 0.00 0.00 3.85
1951 2539 7.512119 GCGCAGAAAGAAATGTCGAATAAAATC 60.512 37.037 0.30 0.00 0.00 2.17
2034 2622 6.668323 CACTTTCAACATGTAGGGTTTACTG 58.332 40.000 0.00 0.00 0.00 2.74
2146 2736 3.058293 CCATAACAACACAGCAACGTGAT 60.058 43.478 7.80 0.00 39.34 3.06
2151 2741 1.001815 ACGCCATAACAACACAGCAAC 60.002 47.619 0.00 0.00 0.00 4.17
2199 2789 8.006590 GCAGTATTTATATCTTCAAAGCTCACG 58.993 37.037 0.00 0.00 0.00 4.35
2244 2834 6.072175 TGCAAGGTATGATCAACTTGGTTAAC 60.072 38.462 26.08 16.10 40.37 2.01
2381 2973 6.314784 CGAAGAAAAATGGTCACAGGTAATC 58.685 40.000 0.00 0.00 0.00 1.75
2647 3243 5.705441 CCGATGCAATAAAGGGAAGCTAATA 59.295 40.000 0.00 0.00 0.00 0.98
2655 3251 4.504864 CCTGTATCCGATGCAATAAAGGGA 60.505 45.833 4.87 0.15 31.58 4.20
2714 3311 6.758416 TCGTCAATCACCTCAATGAGATTTAG 59.242 38.462 12.53 0.00 30.46 1.85
2819 3416 2.983229 AGATGACAACAAGCCTGCTAG 58.017 47.619 0.00 0.00 0.00 3.42
2901 3498 2.697751 CACACCATTTTCCCCTCAACAA 59.302 45.455 0.00 0.00 0.00 2.83
3042 3651 8.523915 TTAGCACAGAATTAACCATGATGAAT 57.476 30.769 0.00 0.00 0.00 2.57
3154 3764 9.176460 TGATGCTTCAAATAATCATTGTCTACA 57.824 29.630 0.00 0.00 0.00 2.74
3307 3917 3.923017 AAGCAAACATGGACTAACAGC 57.077 42.857 0.00 0.00 0.00 4.40
3391 4002 8.297426 AGCATGATGTGAGCATTGATTATAAAG 58.703 33.333 0.00 0.00 35.07 1.85
3427 4047 8.638873 AGTCGGTACATTTGACTGATATATGAA 58.361 33.333 8.06 0.00 41.21 2.57
3483 4103 7.611855 AGCTGAAAACTACCTAAACATTGCTAT 59.388 33.333 0.00 0.00 0.00 2.97
3487 4107 7.648142 TGAAGCTGAAAACTACCTAAACATTG 58.352 34.615 0.00 0.00 0.00 2.82
3490 4110 9.515226 AATATGAAGCTGAAAACTACCTAAACA 57.485 29.630 0.00 0.00 0.00 2.83
3504 4124 8.397906 GCACTGTATTAACAAATATGAAGCTGA 58.602 33.333 0.00 0.00 34.49 4.26
3505 4125 8.400947 AGCACTGTATTAACAAATATGAAGCTG 58.599 33.333 0.00 0.00 34.49 4.24
3506 4126 8.511604 AGCACTGTATTAACAAATATGAAGCT 57.488 30.769 0.00 0.00 34.49 3.74
3507 4127 9.013490 CAAGCACTGTATTAACAAATATGAAGC 57.987 33.333 0.00 0.00 34.49 3.86
3509 4129 9.019656 ACCAAGCACTGTATTAACAAATATGAA 57.980 29.630 0.00 0.00 34.49 2.57
3510 4130 8.574251 ACCAAGCACTGTATTAACAAATATGA 57.426 30.769 0.00 0.00 34.49 2.15
3518 4142 6.067263 TCAACAACCAAGCACTGTATTAAC 57.933 37.500 0.00 0.00 0.00 2.01
3522 4146 3.820557 ACTCAACAACCAAGCACTGTAT 58.179 40.909 0.00 0.00 0.00 2.29
3552 4176 7.395206 GGCTTTAAATAGGGTTCTGGTTTTCTA 59.605 37.037 0.00 0.00 0.00 2.10
3587 4211 4.285863 TGTTTCACATCTCCCCTGTTTTT 58.714 39.130 0.00 0.00 0.00 1.94
3609 4233 9.270640 CAAGCATTATACTCTAGAAGAAAGCAT 57.729 33.333 0.00 0.00 0.00 3.79
3707 4331 0.807667 GATGCATATCGCCGCCCTAG 60.808 60.000 0.00 0.00 41.33 3.02
3741 4365 5.252547 TAAGTGAGCTTCATATGGCAACAA 58.747 37.500 2.13 0.00 42.78 2.83
3815 4447 5.105797 CCATTATGTACCAAAGTGTGTGCAT 60.106 40.000 0.00 0.00 40.27 3.96
3869 4501 9.598517 AGTGTAAAATTTGTGACATTGAATGTT 57.401 25.926 12.62 0.00 45.03 2.71
3891 4523 4.270008 ACAAACACCTGCTTAAGAAGTGT 58.730 39.130 15.72 15.72 0.00 3.55
3893 4525 4.947388 TCAACAAACACCTGCTTAAGAAGT 59.053 37.500 9.72 0.00 0.00 3.01
3934 4829 2.046313 GAGCGTGCAAATGTGTGAAAG 58.954 47.619 0.00 0.00 0.00 2.62
4289 5201 5.442260 CGATATCGTTCGCGTATGCAATTTA 60.442 40.000 17.06 0.00 42.11 1.40
4400 5313 1.903877 GCACCAAGCTAGGAGGCTCA 61.904 60.000 17.69 0.00 42.24 4.26
4431 5344 2.545526 CCTGCAGCATAATCAAGTACCG 59.454 50.000 8.66 0.00 0.00 4.02
4561 5474 2.949177 TGGTAACTGGCTGAATGTGT 57.051 45.000 0.00 0.00 37.61 3.72
4566 5479 2.356665 TGCTTTGGTAACTGGCTGAA 57.643 45.000 0.00 0.00 37.61 3.02
4584 5497 4.578871 TGGTGTTGTACTTCAGATGGATG 58.421 43.478 0.00 0.00 0.00 3.51
4729 5642 0.673437 CATCACACCCACAACCCAAC 59.327 55.000 0.00 0.00 0.00 3.77
4762 5675 6.127647 TGGCCAGAGAATATTTTAGCAACTTG 60.128 38.462 0.00 0.00 0.00 3.16
4873 5786 1.375523 GGTAACACCGACTGCCCAG 60.376 63.158 0.00 0.00 0.00 4.45
4982 5895 3.057033 GTCTCTGCGGTAGGTAAACTGAA 60.057 47.826 0.00 0.00 0.00 3.02
5000 5913 0.109039 GAGCGACCTTGGTGAGTCTC 60.109 60.000 0.00 0.00 0.00 3.36
5104 6017 3.136626 AGCAAGGAACACCTTTGTAGAGT 59.863 43.478 0.00 0.00 41.48 3.24
5139 6052 1.212688 ACCCAGATTGGATGATTGCGA 59.787 47.619 0.00 0.00 40.96 5.10
5140 6053 1.605710 GACCCAGATTGGATGATTGCG 59.394 52.381 0.00 0.00 40.96 4.85
5162 6078 1.065491 AGCACACCTTCCGATGCATAA 60.065 47.619 0.00 0.00 40.63 1.90
5203 6119 1.509644 CTGCGAGGAAAGCACAAGCA 61.510 55.000 0.00 0.00 45.49 3.91
5205 6121 1.396301 GATCTGCGAGGAAAGCACAAG 59.604 52.381 0.00 0.00 40.01 3.16
5296 6212 0.865769 CGCACCTACACACAAACTCC 59.134 55.000 0.00 0.00 0.00 3.85
5475 6398 1.134699 TCAACTGGCGCTCTATTCTGG 60.135 52.381 7.64 0.00 0.00 3.86
5843 6774 6.010850 TGACAGGTCAGATGTAGACTAAACT 58.989 40.000 0.00 0.00 36.29 2.66
5944 6876 9.528018 TTAGATTTGTGTTTGAACTTGGATTTC 57.472 29.630 0.00 0.00 0.00 2.17
5967 6899 7.117379 GCCACTACCTTACTGTTACAGTTTTAG 59.883 40.741 23.52 18.07 42.59 1.85
5989 6921 0.329596 AATCCCAGGAAGTGAGCCAC 59.670 55.000 0.00 0.00 34.10 5.01
6006 6938 2.167693 CTGCCAGATGATTGTTGCCAAT 59.832 45.455 0.00 0.00 43.97 3.16
6014 6946 0.458669 GCCAACCTGCCAGATGATTG 59.541 55.000 0.00 0.00 0.00 2.67
6144 7384 4.118410 GGAGTGATGTCTCTGCTGTATTG 58.882 47.826 0.00 0.00 35.11 1.90
6157 7397 2.057922 AGTGAAACCTGGGAGTGATGT 58.942 47.619 0.00 0.00 37.80 3.06
6204 7448 8.188139 CCACAATGAAAACTGTAACTGTTAGTT 58.812 33.333 0.00 1.77 41.97 2.24
6243 7498 9.989296 AGCAGGACTTGTATCTATCTATCTATT 57.011 33.333 0.00 0.00 0.00 1.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.