Multiple sequence alignment - TraesCS1B01G476800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G476800 chr1B 100.000 2384 0 0 1 2384 685388869 685391252 0.000000e+00 4403
1 TraesCS1B01G476800 chr1B 100.000 1431 0 0 2618 4048 685391486 685392916 0.000000e+00 2643
2 TraesCS1B01G476800 chr1B 94.643 1064 44 11 1313 2370 299108077 299109133 0.000000e+00 1637
3 TraesCS1B01G476800 chr1B 93.414 1078 51 17 1316 2384 310256464 310257530 0.000000e+00 1580
4 TraesCS1B01G476800 chr1B 97.619 462 11 0 3085 3546 391106411 391106872 0.000000e+00 793
5 TraesCS1B01G476800 chr1B 97.186 462 13 0 3085 3546 526547334 526546873 0.000000e+00 782
6 TraesCS1B01G476800 chr1B 83.197 244 13 11 2618 2861 309716615 309716830 8.870000e-47 198
7 TraesCS1B01G476800 chr1B 81.967 244 16 10 2618 2861 143021462 143021677 8.940000e-42 182
8 TraesCS1B01G476800 chr3B 97.336 1314 32 3 4 1315 131914704 131913392 0.000000e+00 2230
9 TraesCS1B01G476800 chr3B 96.799 1312 40 2 5 1314 680396475 680395164 0.000000e+00 2189
10 TraesCS1B01G476800 chr3B 95.351 1312 58 3 5 1314 108523326 108522016 0.000000e+00 2082
11 TraesCS1B01G476800 chr3B 95.176 1078 39 13 1315 2384 240776696 240777768 0.000000e+00 1690
12 TraesCS1B01G476800 chr3B 94.212 812 45 2 5 814 731978411 731977600 0.000000e+00 1238
13 TraesCS1B01G476800 chr3B 96.024 503 19 1 3546 4048 791831566 791831065 0.000000e+00 817
14 TraesCS1B01G476800 chr3B 94.235 503 29 0 3546 4048 164886034 164886536 0.000000e+00 769
15 TraesCS1B01G476800 chr3B 94.223 502 29 0 3547 4048 806353198 806352697 0.000000e+00 767
16 TraesCS1B01G476800 chr3B 93.241 503 34 0 3546 4048 484534525 484534023 0.000000e+00 741
17 TraesCS1B01G476800 chr3B 92.688 506 37 0 3543 4048 193185180 193185685 0.000000e+00 730
18 TraesCS1B01G476800 chr3B 88.142 506 60 0 3543 4048 38007450 38007955 1.610000e-168 603
19 TraesCS1B01G476800 chr3B 98.649 222 3 0 2714 2935 235341727 235341948 1.050000e-105 394
20 TraesCS1B01G476800 chr3B 97.788 226 3 2 2714 2939 806700173 806699950 4.910000e-104 388
21 TraesCS1B01G476800 chr3B 96.078 153 5 1 2932 3084 680395168 680395017 8.690000e-62 248
22 TraesCS1B01G476800 chr3B 96.644 149 4 1 2936 3084 131913394 131913247 3.120000e-61 246
23 TraesCS1B01G476800 chr3B 95.973 149 5 1 2936 3084 610991767 610991914 1.450000e-59 241
24 TraesCS1B01G476800 chr3B 96.575 146 4 1 2939 3084 731968392 731968248 1.450000e-59 241
25 TraesCS1B01G476800 chr4B 96.728 1314 39 2 5 1314 2417765 2416452 0.000000e+00 2185
26 TraesCS1B01G476800 chr4B 93.960 149 7 2 2936 3084 29157235 29157381 1.460000e-54 224
27 TraesCS1B01G476800 chr2B 96.277 1316 46 3 5 1318 110633560 110632246 0.000000e+00 2156
28 TraesCS1B01G476800 chr2B 95.960 1312 51 2 5 1314 697785741 697787052 0.000000e+00 2128
29 TraesCS1B01G476800 chr2B 93.698 1079 55 13 1312 2384 15550105 15549034 0.000000e+00 1604
30 TraesCS1B01G476800 chr2B 97.414 464 12 0 3083 3546 238364581 238364118 0.000000e+00 791
31 TraesCS1B01G476800 chr2B 94.831 503 26 0 3546 4048 198228744 198229246 0.000000e+00 785
32 TraesCS1B01G476800 chr2B 96.989 465 14 0 3082 3546 6099586 6099122 0.000000e+00 782
33 TraesCS1B01G476800 chr2B 94.632 503 27 0 3546 4048 745076295 745075793 0.000000e+00 780
34 TraesCS1B01G476800 chr2B 89.941 507 49 2 3543 4048 161596621 161597126 0.000000e+00 652
35 TraesCS1B01G476800 chr2B 95.968 124 5 0 2936 3059 697787051 697787174 6.860000e-48 202
36 TraesCS1B01G476800 chr6B 95.811 1313 52 2 5 1314 652698486 652697174 0.000000e+00 2117
37 TraesCS1B01G476800 chr6B 97.388 1072 20 8 1316 2384 276646888 276645822 0.000000e+00 1818
38 TraesCS1B01G476800 chr6B 94.865 1071 37 15 1316 2381 545944414 545945471 0.000000e+00 1657
39 TraesCS1B01G476800 chr6B 88.142 506 60 0 3543 4048 124780043 124780548 1.610000e-168 603
40 TraesCS1B01G476800 chr6B 97.806 319 7 0 2618 2936 276645791 276645473 5.910000e-153 551
41 TraesCS1B01G476800 chr6B 98.649 222 3 0 2714 2935 236204451 236204230 1.050000e-105 394
42 TraesCS1B01G476800 chr6B 94.118 153 8 1 2932 3084 652697178 652697027 8.750000e-57 231
43 TraesCS1B01G476800 chr6B 96.183 131 5 0 2623 2753 607990538 607990668 8.810000e-52 215
44 TraesCS1B01G476800 chr7B 94.909 1316 60 6 5 1318 619813977 619812667 0.000000e+00 2052
45 TraesCS1B01G476800 chr7B 94.522 1077 45 11 1315 2384 206599146 206600215 0.000000e+00 1650
46 TraesCS1B01G476800 chr7B 94.681 1034 46 9 1316 2346 207292922 207293949 0.000000e+00 1596
47 TraesCS1B01G476800 chr7B 97.619 462 11 0 3085 3546 162196885 162196424 0.000000e+00 793
48 TraesCS1B01G476800 chr7B 96.815 471 15 0 3076 3546 544539848 544540318 0.000000e+00 787
49 TraesCS1B01G476800 chr7B 97.186 462 13 0 3085 3546 544561307 544561768 0.000000e+00 782
50 TraesCS1B01G476800 chr7B 88.933 506 56 0 3543 4048 633617098 633617603 3.440000e-175 625
51 TraesCS1B01G476800 chr7B 88.072 503 60 0 3546 4048 104346250 104345748 7.490000e-167 597
52 TraesCS1B01G476800 chr7B 98.198 222 4 0 2714 2935 415034278 415034057 4.910000e-104 388
53 TraesCS1B01G476800 chr7B 96.296 135 5 0 2618 2752 431139365 431139231 5.270000e-54 222
54 TraesCS1B01G476800 chr7B 97.170 106 3 0 2642 2747 415034393 415034288 3.210000e-41 180
55 TraesCS1B01G476800 chr7B 95.536 112 5 0 2641 2752 589061698 589061587 3.210000e-41 180
56 TraesCS1B01G476800 chr5B 95.138 1049 43 8 1315 2361 239803503 239804545 0.000000e+00 1648
57 TraesCS1B01G476800 chr5B 96.795 468 15 0 3079 3546 202901287 202901754 0.000000e+00 782
58 TraesCS1B01G476800 chr5B 91.252 503 44 0 3546 4048 170755007 170754505 0.000000e+00 686
59 TraesCS1B01G476800 chr5B 90.457 503 48 0 3546 4048 341741207 341740705 0.000000e+00 664
60 TraesCS1B01G476800 chr5B 98.649 222 3 0 2714 2935 531929706 531929927 1.050000e-105 394
61 TraesCS1B01G476800 chr5B 98.649 222 3 0 2714 2935 682383547 682383768 1.050000e-105 394
62 TraesCS1B01G476800 chr5B 96.970 99 3 0 2618 2716 531929246 531929344 2.500000e-37 167
63 TraesCS1B01G476800 chr5A 93.556 869 48 6 448 1314 1135995 1135133 0.000000e+00 1288
64 TraesCS1B01G476800 chr5A 95.726 117 5 0 2939 3055 1135132 1135016 5.340000e-44 189
65 TraesCS1B01G476800 chrUn 97.186 462 13 0 3085 3546 77865801 77865340 0.000000e+00 782
66 TraesCS1B01G476800 chr2A 97.357 227 6 0 2714 2940 762001051 762000825 1.760000e-103 387
67 TraesCS1B01G476800 chr4A 96.552 232 7 1 2714 2944 741765874 741766105 2.280000e-102 383
68 TraesCS1B01G476800 chr4A 96.296 135 5 0 2618 2752 729393698 729393832 5.270000e-54 222
69 TraesCS1B01G476800 chr3A 93.548 124 8 0 2930 3053 290709193 290709316 6.910000e-43 185


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G476800 chr1B 685388869 685392916 4047 False 3523.0 4403 100.0000 1 4048 2 chr1B.!!$F6 4047
1 TraesCS1B01G476800 chr1B 299108077 299109133 1056 False 1637.0 1637 94.6430 1313 2370 1 chr1B.!!$F2 1057
2 TraesCS1B01G476800 chr1B 310256464 310257530 1066 False 1580.0 1580 93.4140 1316 2384 1 chr1B.!!$F4 1068
3 TraesCS1B01G476800 chr3B 108522016 108523326 1310 True 2082.0 2082 95.3510 5 1314 1 chr3B.!!$R1 1309
4 TraesCS1B01G476800 chr3B 240776696 240777768 1072 False 1690.0 1690 95.1760 1315 2384 1 chr3B.!!$F5 1069
5 TraesCS1B01G476800 chr3B 131913247 131914704 1457 True 1238.0 2230 96.9900 4 3084 2 chr3B.!!$R8 3080
6 TraesCS1B01G476800 chr3B 731977600 731978411 811 True 1238.0 1238 94.2120 5 814 1 chr3B.!!$R4 809
7 TraesCS1B01G476800 chr3B 680395017 680396475 1458 True 1218.5 2189 96.4385 5 3084 2 chr3B.!!$R9 3079
8 TraesCS1B01G476800 chr3B 791831065 791831566 501 True 817.0 817 96.0240 3546 4048 1 chr3B.!!$R5 502
9 TraesCS1B01G476800 chr3B 164886034 164886536 502 False 769.0 769 94.2350 3546 4048 1 chr3B.!!$F2 502
10 TraesCS1B01G476800 chr3B 806352697 806353198 501 True 767.0 767 94.2230 3547 4048 1 chr3B.!!$R6 501
11 TraesCS1B01G476800 chr3B 484534023 484534525 502 True 741.0 741 93.2410 3546 4048 1 chr3B.!!$R2 502
12 TraesCS1B01G476800 chr3B 193185180 193185685 505 False 730.0 730 92.6880 3543 4048 1 chr3B.!!$F3 505
13 TraesCS1B01G476800 chr3B 38007450 38007955 505 False 603.0 603 88.1420 3543 4048 1 chr3B.!!$F1 505
14 TraesCS1B01G476800 chr4B 2416452 2417765 1313 True 2185.0 2185 96.7280 5 1314 1 chr4B.!!$R1 1309
15 TraesCS1B01G476800 chr2B 110632246 110633560 1314 True 2156.0 2156 96.2770 5 1318 1 chr2B.!!$R3 1313
16 TraesCS1B01G476800 chr2B 15549034 15550105 1071 True 1604.0 1604 93.6980 1312 2384 1 chr2B.!!$R2 1072
17 TraesCS1B01G476800 chr2B 697785741 697787174 1433 False 1165.0 2128 95.9640 5 3059 2 chr2B.!!$F3 3054
18 TraesCS1B01G476800 chr2B 198228744 198229246 502 False 785.0 785 94.8310 3546 4048 1 chr2B.!!$F2 502
19 TraesCS1B01G476800 chr2B 745075793 745076295 502 True 780.0 780 94.6320 3546 4048 1 chr2B.!!$R5 502
20 TraesCS1B01G476800 chr2B 161596621 161597126 505 False 652.0 652 89.9410 3543 4048 1 chr2B.!!$F1 505
21 TraesCS1B01G476800 chr6B 545944414 545945471 1057 False 1657.0 1657 94.8650 1316 2381 1 chr6B.!!$F2 1065
22 TraesCS1B01G476800 chr6B 276645473 276646888 1415 True 1184.5 1818 97.5970 1316 2936 2 chr6B.!!$R2 1620
23 TraesCS1B01G476800 chr6B 652697027 652698486 1459 True 1174.0 2117 94.9645 5 3084 2 chr6B.!!$R3 3079
24 TraesCS1B01G476800 chr6B 124780043 124780548 505 False 603.0 603 88.1420 3543 4048 1 chr6B.!!$F1 505
25 TraesCS1B01G476800 chr7B 619812667 619813977 1310 True 2052.0 2052 94.9090 5 1318 1 chr7B.!!$R5 1313
26 TraesCS1B01G476800 chr7B 206599146 206600215 1069 False 1650.0 1650 94.5220 1315 2384 1 chr7B.!!$F1 1069
27 TraesCS1B01G476800 chr7B 207292922 207293949 1027 False 1596.0 1596 94.6810 1316 2346 1 chr7B.!!$F2 1030
28 TraesCS1B01G476800 chr7B 633617098 633617603 505 False 625.0 625 88.9330 3543 4048 1 chr7B.!!$F5 505
29 TraesCS1B01G476800 chr7B 104345748 104346250 502 True 597.0 597 88.0720 3546 4048 1 chr7B.!!$R1 502
30 TraesCS1B01G476800 chr5B 239803503 239804545 1042 False 1648.0 1648 95.1380 1315 2361 1 chr5B.!!$F2 1046
31 TraesCS1B01G476800 chr5B 170754505 170755007 502 True 686.0 686 91.2520 3546 4048 1 chr5B.!!$R1 502
32 TraesCS1B01G476800 chr5B 341740705 341741207 502 True 664.0 664 90.4570 3546 4048 1 chr5B.!!$R2 502
33 TraesCS1B01G476800 chr5B 531929246 531929927 681 False 280.5 394 97.8095 2618 2935 2 chr5B.!!$F4 317
34 TraesCS1B01G476800 chr5A 1135016 1135995 979 True 738.5 1288 94.6410 448 3055 2 chr5A.!!$R1 2607

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
880 885 0.333652 TCTCCCATGGTGACGTCCTA 59.666 55.0 14.12 2.68 0.0 2.94 F
1202 1207 1.131638 TGGAGTAGATGGATGCACCC 58.868 55.0 0.00 0.00 38.0 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2868 3294 2.745821 GGTTAAAAACCCTCGCTACTGG 59.254 50.0 0.00 0.00 46.12 4.00 R
3112 3538 0.039074 CGATGATAGTCCGGCTGTCC 60.039 60.0 16.04 5.15 34.84 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 6.112058 GGATAGAAGAAGAAGACAACAGCAT 58.888 40.000 0.00 0.00 0.00 3.79
258 262 0.734309 TCGCTGCTGCACAATAATGG 59.266 50.000 16.29 0.00 39.64 3.16
316 320 2.014857 CACCATCAGTCAATGCAGGAG 58.985 52.381 0.00 0.00 0.00 3.69
685 690 3.192541 ACAAGGAATTGTGCCAAAACC 57.807 42.857 0.00 0.00 33.23 3.27
747 752 4.142469 GCGCACCAAATTAACATAGGAAGT 60.142 41.667 0.30 0.00 0.00 3.01
880 885 0.333652 TCTCCCATGGTGACGTCCTA 59.666 55.000 14.12 2.68 0.00 2.94
1202 1207 1.131638 TGGAGTAGATGGATGCACCC 58.868 55.000 0.00 0.00 38.00 4.61
1832 1857 8.755018 CATATTTCACTGTTTGAGTTTGAAACC 58.245 33.333 4.14 0.00 32.33 3.27
1929 1966 3.632145 AGATTTGACCACAGTTTGACCAC 59.368 43.478 0.00 0.00 0.00 4.16
2173 2232 5.810587 TGGATGTAACTTTTCGAGTAGATGC 59.189 40.000 3.22 0.00 37.72 3.91
2264 2323 7.448161 TCCAGAGAGATTTTGCAAATAAAGTCA 59.552 33.333 13.65 0.00 31.13 3.41
2868 3294 1.134560 ACCTGCGCTGCTAGTAAGTAC 59.865 52.381 9.73 0.00 0.00 2.73
2915 3341 3.935203 GCTGCTGCTAAGATTCTGTGTAA 59.065 43.478 8.53 0.00 36.03 2.41
2936 3362 1.207329 AGCCTTTTCCCTAGTAGTGCG 59.793 52.381 0.00 0.00 0.00 5.34
2937 3363 1.206371 GCCTTTTCCCTAGTAGTGCGA 59.794 52.381 0.00 0.00 0.00 5.10
3084 3510 4.974438 TGGAAGGCGAGGGTGGGT 62.974 66.667 0.00 0.00 0.00 4.51
3085 3511 4.410400 GGAAGGCGAGGGTGGGTG 62.410 72.222 0.00 0.00 0.00 4.61
3086 3512 3.319198 GAAGGCGAGGGTGGGTGA 61.319 66.667 0.00 0.00 0.00 4.02
3087 3513 3.316573 GAAGGCGAGGGTGGGTGAG 62.317 68.421 0.00 0.00 0.00 3.51
3091 3517 3.077556 CGAGGGTGGGTGAGGGAG 61.078 72.222 0.00 0.00 0.00 4.30
3092 3518 2.122954 GAGGGTGGGTGAGGGAGT 59.877 66.667 0.00 0.00 0.00 3.85
3093 3519 1.990614 GAGGGTGGGTGAGGGAGTC 60.991 68.421 0.00 0.00 0.00 3.36
3094 3520 3.009714 GGGTGGGTGAGGGAGTCC 61.010 72.222 0.00 0.00 0.00 3.85
3096 3522 2.294078 GGTGGGTGAGGGAGTCCTG 61.294 68.421 9.58 0.00 45.05 3.86
3097 3523 2.122729 TGGGTGAGGGAGTCCTGG 59.877 66.667 9.58 0.00 45.05 4.45
3098 3524 2.450243 GGGTGAGGGAGTCCTGGA 59.550 66.667 9.58 0.00 45.05 3.86
3099 3525 1.990614 GGGTGAGGGAGTCCTGGAC 60.991 68.421 19.20 19.20 45.05 4.02
3100 3526 1.079438 GGTGAGGGAGTCCTGGACT 59.921 63.158 28.70 28.70 46.42 3.85
3101 3527 0.335361 GGTGAGGGAGTCCTGGACTA 59.665 60.000 28.41 10.70 43.53 2.59
3102 3528 1.686741 GGTGAGGGAGTCCTGGACTAG 60.687 61.905 28.41 0.00 43.53 2.57
3103 3529 0.631753 TGAGGGAGTCCTGGACTAGG 59.368 60.000 28.41 0.00 43.53 3.02
3110 3536 4.051932 CCTGGACTAGGGGGTGTC 57.948 66.667 0.00 0.00 43.33 3.67
3113 3539 2.762875 GGACTAGGGGGTGTCCGG 60.763 72.222 0.00 0.00 42.51 5.14
3114 3540 2.361771 GACTAGGGGGTGTCCGGA 59.638 66.667 0.00 0.00 36.01 5.14
3115 3541 2.038490 ACTAGGGGGTGTCCGGAC 59.962 66.667 28.17 28.17 36.01 4.79
3116 3542 2.038329 CTAGGGGGTGTCCGGACA 59.962 66.667 33.23 33.23 39.32 4.02
3117 3543 2.038329 TAGGGGGTGTCCGGACAG 59.962 66.667 37.04 0.00 42.74 3.51
3130 3556 3.896317 GGACAGCCGGACTATCATC 57.104 57.895 5.05 0.00 0.00 2.92
3131 3557 0.039074 GGACAGCCGGACTATCATCG 60.039 60.000 5.05 0.00 0.00 3.84
3132 3558 0.669077 GACAGCCGGACTATCATCGT 59.331 55.000 5.05 0.00 0.00 3.73
3133 3559 0.669077 ACAGCCGGACTATCATCGTC 59.331 55.000 5.05 0.00 0.00 4.20
3134 3560 0.039074 CAGCCGGACTATCATCGTCC 60.039 60.000 5.05 0.00 45.88 4.79
3137 3563 4.968197 GGACTATCATCGTCCGCC 57.032 61.111 0.00 0.00 41.29 6.13
3138 3564 1.081376 GGACTATCATCGTCCGCCG 60.081 63.158 0.00 0.00 41.29 6.46
3139 3565 1.081376 GACTATCATCGTCCGCCGG 60.081 63.158 0.00 0.00 37.11 6.13
3140 3566 1.512996 GACTATCATCGTCCGCCGGA 61.513 60.000 5.05 0.00 37.11 5.14
3149 3575 3.379445 TCCGCCGGACTCCAAGAC 61.379 66.667 5.05 0.00 0.00 3.01
3150 3576 3.382832 CCGCCGGACTCCAAGACT 61.383 66.667 5.05 0.00 0.00 3.24
3151 3577 2.050350 CCGCCGGACTCCAAGACTA 61.050 63.158 5.05 0.00 0.00 2.59
3152 3578 1.139095 CGCCGGACTCCAAGACTAC 59.861 63.158 5.05 0.00 0.00 2.73
3153 3579 1.139095 GCCGGACTCCAAGACTACG 59.861 63.158 5.05 0.00 0.00 3.51
3154 3580 1.310933 GCCGGACTCCAAGACTACGA 61.311 60.000 5.05 0.00 0.00 3.43
3155 3581 1.171308 CCGGACTCCAAGACTACGAA 58.829 55.000 0.00 0.00 0.00 3.85
3156 3582 1.132643 CCGGACTCCAAGACTACGAAG 59.867 57.143 0.00 0.00 0.00 3.79
3157 3583 2.082231 CGGACTCCAAGACTACGAAGA 58.918 52.381 0.00 0.00 0.00 2.87
3158 3584 2.683867 CGGACTCCAAGACTACGAAGAT 59.316 50.000 0.00 0.00 0.00 2.40
3159 3585 3.875727 CGGACTCCAAGACTACGAAGATA 59.124 47.826 0.00 0.00 0.00 1.98
3160 3586 4.260702 CGGACTCCAAGACTACGAAGATAC 60.261 50.000 0.00 0.00 0.00 2.24
3161 3587 4.639310 GGACTCCAAGACTACGAAGATACA 59.361 45.833 0.00 0.00 0.00 2.29
3162 3588 5.125097 GGACTCCAAGACTACGAAGATACAA 59.875 44.000 0.00 0.00 0.00 2.41
3163 3589 6.197364 ACTCCAAGACTACGAAGATACAAG 57.803 41.667 0.00 0.00 0.00 3.16
3164 3590 5.944599 ACTCCAAGACTACGAAGATACAAGA 59.055 40.000 0.00 0.00 0.00 3.02
3165 3591 6.603997 ACTCCAAGACTACGAAGATACAAGAT 59.396 38.462 0.00 0.00 0.00 2.40
3166 3592 7.122948 ACTCCAAGACTACGAAGATACAAGATT 59.877 37.037 0.00 0.00 0.00 2.40
3167 3593 7.258441 TCCAAGACTACGAAGATACAAGATTG 58.742 38.462 0.00 0.00 0.00 2.67
3168 3594 7.122204 TCCAAGACTACGAAGATACAAGATTGA 59.878 37.037 0.00 0.00 0.00 2.57
3169 3595 7.759886 CCAAGACTACGAAGATACAAGATTGAA 59.240 37.037 0.00 0.00 0.00 2.69
3170 3596 8.802856 CAAGACTACGAAGATACAAGATTGAAG 58.197 37.037 0.00 0.00 0.00 3.02
3171 3597 8.282455 AGACTACGAAGATACAAGATTGAAGA 57.718 34.615 0.00 0.00 0.00 2.87
3172 3598 8.185505 AGACTACGAAGATACAAGATTGAAGAC 58.814 37.037 0.00 0.00 0.00 3.01
3173 3599 8.057536 ACTACGAAGATACAAGATTGAAGACT 57.942 34.615 0.00 0.00 0.00 3.24
3174 3600 8.185505 ACTACGAAGATACAAGATTGAAGACTC 58.814 37.037 0.00 0.00 0.00 3.36
3175 3601 6.334202 ACGAAGATACAAGATTGAAGACTCC 58.666 40.000 0.00 0.00 0.00 3.85
3176 3602 5.457148 CGAAGATACAAGATTGAAGACTCCG 59.543 44.000 0.00 0.00 0.00 4.63
3177 3603 5.923733 AGATACAAGATTGAAGACTCCGT 57.076 39.130 0.00 0.00 0.00 4.69
3178 3604 5.897050 AGATACAAGATTGAAGACTCCGTC 58.103 41.667 0.00 0.00 0.00 4.79
3179 3605 3.320673 ACAAGATTGAAGACTCCGTCC 57.679 47.619 0.00 0.00 32.18 4.79
3180 3606 2.028020 ACAAGATTGAAGACTCCGTCCC 60.028 50.000 0.00 0.00 32.18 4.46
3181 3607 0.818296 AGATTGAAGACTCCGTCCCG 59.182 55.000 0.00 0.00 32.18 5.14
3182 3608 0.531200 GATTGAAGACTCCGTCCCGT 59.469 55.000 0.00 0.00 32.18 5.28
3183 3609 0.246635 ATTGAAGACTCCGTCCCGTG 59.753 55.000 0.00 0.00 32.18 4.94
3184 3610 1.111116 TTGAAGACTCCGTCCCGTGT 61.111 55.000 0.00 0.00 32.18 4.49
3185 3611 1.212229 GAAGACTCCGTCCCGTGTC 59.788 63.158 0.00 0.00 32.18 3.67
3186 3612 2.210341 GAAGACTCCGTCCCGTGTCC 62.210 65.000 0.00 0.00 32.18 4.02
3187 3613 4.112341 GACTCCGTCCCGTGTCCG 62.112 72.222 0.00 0.00 0.00 4.79
3201 3627 4.910613 TCCGGATGGGACTTTCCT 57.089 55.556 0.00 0.00 40.94 3.36
3202 3628 3.098445 TCCGGATGGGACTTTCCTT 57.902 52.632 0.00 0.00 40.94 3.36
3203 3629 0.618458 TCCGGATGGGACTTTCCTTG 59.382 55.000 0.00 0.00 40.94 3.61
3204 3630 0.394352 CCGGATGGGACTTTCCTTGG 60.394 60.000 0.00 0.00 38.47 3.61
3205 3631 1.032114 CGGATGGGACTTTCCTTGGC 61.032 60.000 0.00 0.00 36.57 4.52
3206 3632 1.032114 GGATGGGACTTTCCTTGGCG 61.032 60.000 0.00 0.00 36.57 5.69
3207 3633 0.322546 GATGGGACTTTCCTTGGCGT 60.323 55.000 0.00 0.00 36.57 5.68
3208 3634 0.609131 ATGGGACTTTCCTTGGCGTG 60.609 55.000 0.00 0.00 36.57 5.34
3209 3635 1.971695 GGGACTTTCCTTGGCGTGG 60.972 63.158 0.00 0.00 36.57 4.94
3210 3636 1.072505 GGACTTTCCTTGGCGTGGA 59.927 57.895 0.00 0.00 32.53 4.02
3211 3637 0.536460 GGACTTTCCTTGGCGTGGAA 60.536 55.000 6.88 6.88 41.33 3.53
3212 3638 0.875059 GACTTTCCTTGGCGTGGAAG 59.125 55.000 10.20 8.04 43.48 3.46
3213 3639 0.537371 ACTTTCCTTGGCGTGGAAGG 60.537 55.000 15.33 15.33 43.48 3.46
3222 3648 2.956987 CGTGGAAGGCAAGCTTGG 59.043 61.111 27.10 9.80 0.00 3.61
3230 3656 4.792106 GCAAGCTTGGCAATACGG 57.208 55.556 27.10 0.00 0.00 4.02
3231 3657 2.179764 GCAAGCTTGGCAATACGGA 58.820 52.632 27.10 0.00 0.00 4.69
3232 3658 0.740737 GCAAGCTTGGCAATACGGAT 59.259 50.000 27.10 0.00 0.00 4.18
3233 3659 1.946768 GCAAGCTTGGCAATACGGATA 59.053 47.619 27.10 0.00 0.00 2.59
3234 3660 2.554032 GCAAGCTTGGCAATACGGATAT 59.446 45.455 27.10 0.00 0.00 1.63
3235 3661 3.610114 GCAAGCTTGGCAATACGGATATG 60.610 47.826 27.10 0.00 0.00 1.78
3236 3662 3.492102 AGCTTGGCAATACGGATATGT 57.508 42.857 0.00 0.00 0.00 2.29
3237 3663 4.617253 AGCTTGGCAATACGGATATGTA 57.383 40.909 0.00 0.00 0.00 2.29
3238 3664 4.569943 AGCTTGGCAATACGGATATGTAG 58.430 43.478 0.00 0.00 0.00 2.74
3239 3665 4.283467 AGCTTGGCAATACGGATATGTAGA 59.717 41.667 0.00 0.00 0.00 2.59
3240 3666 5.046304 AGCTTGGCAATACGGATATGTAGAT 60.046 40.000 0.00 0.00 0.00 1.98
3241 3667 5.292101 GCTTGGCAATACGGATATGTAGATC 59.708 44.000 0.00 0.00 0.00 2.75
3242 3668 6.605471 TTGGCAATACGGATATGTAGATCT 57.395 37.500 0.00 0.00 0.00 2.75
3243 3669 6.208988 TGGCAATACGGATATGTAGATCTC 57.791 41.667 0.00 0.00 0.00 2.75
3244 3670 5.127194 TGGCAATACGGATATGTAGATCTCC 59.873 44.000 0.00 0.00 0.00 3.71
3245 3671 5.361285 GGCAATACGGATATGTAGATCTCCT 59.639 44.000 0.00 0.00 0.00 3.69
3246 3672 6.546403 GGCAATACGGATATGTAGATCTCCTA 59.454 42.308 0.00 0.00 0.00 2.94
3247 3673 7.255312 GGCAATACGGATATGTAGATCTCCTAG 60.255 44.444 0.00 0.00 0.00 3.02
3248 3674 7.644490 CAATACGGATATGTAGATCTCCTAGC 58.356 42.308 0.00 0.00 0.00 3.42
3249 3675 5.180810 ACGGATATGTAGATCTCCTAGCA 57.819 43.478 0.00 0.00 0.00 3.49
3250 3676 5.761205 ACGGATATGTAGATCTCCTAGCAT 58.239 41.667 0.00 0.52 0.00 3.79
3251 3677 6.191315 ACGGATATGTAGATCTCCTAGCATT 58.809 40.000 0.00 0.00 0.00 3.56
3252 3678 6.096141 ACGGATATGTAGATCTCCTAGCATTG 59.904 42.308 0.00 0.00 0.00 2.82
3253 3679 6.096141 CGGATATGTAGATCTCCTAGCATTGT 59.904 42.308 0.00 0.00 0.00 2.71
3254 3680 7.283354 CGGATATGTAGATCTCCTAGCATTGTA 59.717 40.741 0.00 0.00 0.00 2.41
3255 3681 8.972127 GGATATGTAGATCTCCTAGCATTGTAA 58.028 37.037 0.00 0.00 0.00 2.41
3256 3682 9.796120 GATATGTAGATCTCCTAGCATTGTAAC 57.204 37.037 0.00 0.00 0.00 2.50
3257 3683 7.847711 ATGTAGATCTCCTAGCATTGTAACT 57.152 36.000 0.00 0.00 0.00 2.24
3258 3684 7.043961 TGTAGATCTCCTAGCATTGTAACTG 57.956 40.000 0.00 0.00 0.00 3.16
3259 3685 6.833933 TGTAGATCTCCTAGCATTGTAACTGA 59.166 38.462 0.00 0.00 0.00 3.41
3260 3686 6.155475 AGATCTCCTAGCATTGTAACTGAC 57.845 41.667 0.00 0.00 0.00 3.51
3261 3687 5.896678 AGATCTCCTAGCATTGTAACTGACT 59.103 40.000 0.00 0.00 0.00 3.41
3262 3688 5.584253 TCTCCTAGCATTGTAACTGACTC 57.416 43.478 0.00 0.00 0.00 3.36
3263 3689 5.265191 TCTCCTAGCATTGTAACTGACTCT 58.735 41.667 0.00 0.00 0.00 3.24
3264 3690 6.424032 TCTCCTAGCATTGTAACTGACTCTA 58.576 40.000 0.00 0.00 0.00 2.43
3265 3691 7.063593 TCTCCTAGCATTGTAACTGACTCTAT 58.936 38.462 0.00 0.00 0.00 1.98
3266 3692 7.013750 TCTCCTAGCATTGTAACTGACTCTATG 59.986 40.741 0.00 0.00 0.00 2.23
3267 3693 6.607600 TCCTAGCATTGTAACTGACTCTATGT 59.392 38.462 0.00 0.00 0.00 2.29
3268 3694 7.778382 TCCTAGCATTGTAACTGACTCTATGTA 59.222 37.037 0.00 0.00 0.00 2.29
3269 3695 8.414003 CCTAGCATTGTAACTGACTCTATGTAA 58.586 37.037 0.00 0.00 0.00 2.41
3270 3696 9.239002 CTAGCATTGTAACTGACTCTATGTAAC 57.761 37.037 0.00 0.00 0.00 2.50
3271 3697 7.042335 AGCATTGTAACTGACTCTATGTAACC 58.958 38.462 0.00 0.00 0.00 2.85
3272 3698 6.258068 GCATTGTAACTGACTCTATGTAACCC 59.742 42.308 0.00 0.00 0.00 4.11
3273 3699 7.556844 CATTGTAACTGACTCTATGTAACCCT 58.443 38.462 0.00 0.00 0.00 4.34
3274 3700 8.692710 CATTGTAACTGACTCTATGTAACCCTA 58.307 37.037 0.00 0.00 0.00 3.53
3275 3701 7.876936 TGTAACTGACTCTATGTAACCCTAG 57.123 40.000 0.00 0.00 0.00 3.02
3276 3702 5.855740 AACTGACTCTATGTAACCCTAGC 57.144 43.478 0.00 0.00 0.00 3.42
3277 3703 4.216708 ACTGACTCTATGTAACCCTAGCC 58.783 47.826 0.00 0.00 0.00 3.93
3278 3704 3.573695 TGACTCTATGTAACCCTAGCCC 58.426 50.000 0.00 0.00 0.00 5.19
3279 3705 3.206866 TGACTCTATGTAACCCTAGCCCT 59.793 47.826 0.00 0.00 0.00 5.19
3280 3706 3.827876 GACTCTATGTAACCCTAGCCCTC 59.172 52.174 0.00 0.00 0.00 4.30
3281 3707 3.467863 ACTCTATGTAACCCTAGCCCTCT 59.532 47.826 0.00 0.00 0.00 3.69
3282 3708 4.083565 CTCTATGTAACCCTAGCCCTCTC 58.916 52.174 0.00 0.00 0.00 3.20
3283 3709 2.104669 ATGTAACCCTAGCCCTCTCC 57.895 55.000 0.00 0.00 0.00 3.71
3284 3710 0.396695 TGTAACCCTAGCCCTCTCCG 60.397 60.000 0.00 0.00 0.00 4.63
3285 3711 0.106318 GTAACCCTAGCCCTCTCCGA 60.106 60.000 0.00 0.00 0.00 4.55
3286 3712 0.858369 TAACCCTAGCCCTCTCCGAT 59.142 55.000 0.00 0.00 0.00 4.18
3287 3713 0.760945 AACCCTAGCCCTCTCCGATG 60.761 60.000 0.00 0.00 0.00 3.84
3288 3714 1.152440 CCCTAGCCCTCTCCGATGT 60.152 63.158 0.00 0.00 0.00 3.06
3289 3715 1.182385 CCCTAGCCCTCTCCGATGTC 61.182 65.000 0.00 0.00 0.00 3.06
3290 3716 0.178975 CCTAGCCCTCTCCGATGTCT 60.179 60.000 0.00 0.00 0.00 3.41
3291 3717 1.074084 CCTAGCCCTCTCCGATGTCTA 59.926 57.143 0.00 0.00 0.00 2.59
3292 3718 2.291282 CCTAGCCCTCTCCGATGTCTAT 60.291 54.545 0.00 0.00 0.00 1.98
3293 3719 3.054287 CCTAGCCCTCTCCGATGTCTATA 60.054 52.174 0.00 0.00 0.00 1.31
3294 3720 3.748645 AGCCCTCTCCGATGTCTATAT 57.251 47.619 0.00 0.00 0.00 0.86
3295 3721 4.864483 AGCCCTCTCCGATGTCTATATA 57.136 45.455 0.00 0.00 0.00 0.86
3296 3722 5.194473 AGCCCTCTCCGATGTCTATATAA 57.806 43.478 0.00 0.00 0.00 0.98
3297 3723 5.580998 AGCCCTCTCCGATGTCTATATAAA 58.419 41.667 0.00 0.00 0.00 1.40
3298 3724 5.419471 AGCCCTCTCCGATGTCTATATAAAC 59.581 44.000 0.00 0.00 0.00 2.01
3299 3725 5.394333 GCCCTCTCCGATGTCTATATAAACC 60.394 48.000 0.00 0.00 0.00 3.27
3300 3726 5.715279 CCCTCTCCGATGTCTATATAAACCA 59.285 44.000 0.00 0.00 0.00 3.67
3301 3727 6.127591 CCCTCTCCGATGTCTATATAAACCAG 60.128 46.154 0.00 0.00 0.00 4.00
3302 3728 6.659668 CCTCTCCGATGTCTATATAAACCAGA 59.340 42.308 0.00 0.00 0.00 3.86
3303 3729 7.148154 CCTCTCCGATGTCTATATAAACCAGAG 60.148 44.444 0.00 0.00 0.00 3.35
3304 3730 6.659668 TCTCCGATGTCTATATAAACCAGAGG 59.340 42.308 0.00 0.00 0.00 3.69
3305 3731 5.715279 TCCGATGTCTATATAAACCAGAGGG 59.285 44.000 0.00 0.00 41.29 4.30
3306 3732 5.411781 CGATGTCTATATAAACCAGAGGGC 58.588 45.833 0.00 0.00 37.90 5.19
3307 3733 5.186021 CGATGTCTATATAAACCAGAGGGCT 59.814 44.000 0.00 0.00 37.90 5.19
3308 3734 6.295349 CGATGTCTATATAAACCAGAGGGCTT 60.295 42.308 0.00 0.00 37.90 4.35
3309 3735 6.824958 TGTCTATATAAACCAGAGGGCTTT 57.175 37.500 0.00 0.00 37.90 3.51
3310 3736 7.924358 TGTCTATATAAACCAGAGGGCTTTA 57.076 36.000 0.00 0.00 37.90 1.85
3311 3737 7.963532 TGTCTATATAAACCAGAGGGCTTTAG 58.036 38.462 0.00 0.00 37.90 1.85
3312 3738 7.567622 TGTCTATATAAACCAGAGGGCTTTAGT 59.432 37.037 0.00 0.00 37.90 2.24
3313 3739 8.089597 GTCTATATAAACCAGAGGGCTTTAGTC 58.910 40.741 0.00 0.00 37.90 2.59
3314 3740 2.881111 AAACCAGAGGGCTTTAGTCC 57.119 50.000 0.00 0.00 40.99 3.85
3315 3741 1.742308 AACCAGAGGGCTTTAGTCCA 58.258 50.000 2.81 0.00 43.78 4.02
3316 3742 1.972588 ACCAGAGGGCTTTAGTCCAT 58.027 50.000 2.81 0.00 43.78 3.41
3317 3743 3.130734 ACCAGAGGGCTTTAGTCCATA 57.869 47.619 2.81 0.00 43.78 2.74
3318 3744 3.041946 ACCAGAGGGCTTTAGTCCATAG 58.958 50.000 2.81 0.00 43.78 2.23
3319 3745 2.370189 CCAGAGGGCTTTAGTCCATAGG 59.630 54.545 2.81 0.00 43.78 2.57
3320 3746 3.309296 CAGAGGGCTTTAGTCCATAGGA 58.691 50.000 2.81 0.00 43.78 2.94
3335 3761 6.681729 TCCATAGGACATAACCTCCATTAC 57.318 41.667 0.00 0.00 41.00 1.89
3336 3762 6.147473 TCCATAGGACATAACCTCCATTACA 58.853 40.000 0.00 0.00 41.00 2.41
3337 3763 6.617784 TCCATAGGACATAACCTCCATTACAA 59.382 38.462 0.00 0.00 41.00 2.41
3338 3764 6.710744 CCATAGGACATAACCTCCATTACAAC 59.289 42.308 0.00 0.00 41.00 3.32
3339 3765 5.772393 AGGACATAACCTCCATTACAACA 57.228 39.130 0.00 0.00 34.98 3.33
3340 3766 6.134535 AGGACATAACCTCCATTACAACAA 57.865 37.500 0.00 0.00 34.98 2.83
3341 3767 6.731467 AGGACATAACCTCCATTACAACAAT 58.269 36.000 0.00 0.00 34.98 2.71
3342 3768 6.828785 AGGACATAACCTCCATTACAACAATC 59.171 38.462 0.00 0.00 34.98 2.67
3343 3769 6.601613 GGACATAACCTCCATTACAACAATCA 59.398 38.462 0.00 0.00 0.00 2.57
3344 3770 7.285401 GGACATAACCTCCATTACAACAATCAT 59.715 37.037 0.00 0.00 0.00 2.45
3345 3771 9.337396 GACATAACCTCCATTACAACAATCATA 57.663 33.333 0.00 0.00 0.00 2.15
3346 3772 9.120538 ACATAACCTCCATTACAACAATCATAC 57.879 33.333 0.00 0.00 0.00 2.39
3347 3773 8.567948 CATAACCTCCATTACAACAATCATACC 58.432 37.037 0.00 0.00 0.00 2.73
3348 3774 6.073447 ACCTCCATTACAACAATCATACCA 57.927 37.500 0.00 0.00 0.00 3.25
3349 3775 6.672593 ACCTCCATTACAACAATCATACCAT 58.327 36.000 0.00 0.00 0.00 3.55
3350 3776 7.811282 ACCTCCATTACAACAATCATACCATA 58.189 34.615 0.00 0.00 0.00 2.74
3351 3777 7.939039 ACCTCCATTACAACAATCATACCATAG 59.061 37.037 0.00 0.00 0.00 2.23
3352 3778 7.391554 CCTCCATTACAACAATCATACCATAGG 59.608 40.741 0.00 0.00 0.00 2.57
3353 3779 6.714810 TCCATTACAACAATCATACCATAGGC 59.285 38.462 0.00 0.00 0.00 3.93
3354 3780 6.716628 CCATTACAACAATCATACCATAGGCT 59.283 38.462 0.00 0.00 0.00 4.58
3355 3781 7.882791 CCATTACAACAATCATACCATAGGCTA 59.117 37.037 0.00 0.00 0.00 3.93
3356 3782 8.939929 CATTACAACAATCATACCATAGGCTAG 58.060 37.037 0.00 0.00 0.00 3.42
3357 3783 5.308825 ACAACAATCATACCATAGGCTAGC 58.691 41.667 6.04 6.04 0.00 3.42
3358 3784 5.072329 ACAACAATCATACCATAGGCTAGCT 59.928 40.000 15.72 3.22 0.00 3.32
3359 3785 5.832539 ACAATCATACCATAGGCTAGCTT 57.167 39.130 15.72 10.11 0.00 3.74
3360 3786 5.799213 ACAATCATACCATAGGCTAGCTTC 58.201 41.667 15.72 0.00 0.00 3.86
3361 3787 5.545723 ACAATCATACCATAGGCTAGCTTCT 59.454 40.000 15.72 6.71 0.00 2.85
3362 3788 6.726299 ACAATCATACCATAGGCTAGCTTCTA 59.274 38.462 15.72 8.91 0.00 2.10
3363 3789 7.093552 ACAATCATACCATAGGCTAGCTTCTAG 60.094 40.741 15.72 3.93 0.00 2.43
3364 3790 5.265191 TCATACCATAGGCTAGCTTCTAGG 58.735 45.833 15.72 12.08 0.00 3.02
3365 3791 2.896039 ACCATAGGCTAGCTTCTAGGG 58.104 52.381 22.47 22.47 41.57 3.53
3366 3792 2.180308 ACCATAGGCTAGCTTCTAGGGT 59.820 50.000 23.48 23.48 43.27 4.34
3367 3793 3.243724 CCATAGGCTAGCTTCTAGGGTT 58.756 50.000 18.28 0.00 34.00 4.11
3368 3794 3.648545 CCATAGGCTAGCTTCTAGGGTTT 59.351 47.826 18.28 0.00 34.00 3.27
3369 3795 4.838986 CCATAGGCTAGCTTCTAGGGTTTA 59.161 45.833 18.28 0.00 34.00 2.01
3370 3796 5.046950 CCATAGGCTAGCTTCTAGGGTTTAG 60.047 48.000 18.28 0.00 34.00 1.85
3371 3797 2.701423 AGGCTAGCTTCTAGGGTTTAGC 59.299 50.000 15.72 0.00 34.32 3.09
3372 3798 2.224329 GGCTAGCTTCTAGGGTTTAGCC 60.224 54.545 15.72 15.56 44.26 3.93
3373 3799 2.701423 GCTAGCTTCTAGGGTTTAGCCT 59.299 50.000 7.70 5.72 37.43 4.58
3374 3800 3.243941 GCTAGCTTCTAGGGTTTAGCCTC 60.244 52.174 7.70 0.00 37.43 4.70
3375 3801 2.120312 AGCTTCTAGGGTTTAGCCTCC 58.880 52.381 3.32 0.00 37.43 4.30
3376 3802 2.120312 GCTTCTAGGGTTTAGCCTCCT 58.880 52.381 3.32 0.00 37.43 3.69
3377 3803 2.506231 GCTTCTAGGGTTTAGCCTCCTT 59.494 50.000 3.32 0.00 37.43 3.36
3378 3804 3.682999 GCTTCTAGGGTTTAGCCTCCTTG 60.683 52.174 3.32 0.00 37.43 3.61
3379 3805 3.484953 TCTAGGGTTTAGCCTCCTTGA 57.515 47.619 3.32 0.00 37.43 3.02
3380 3806 4.008916 TCTAGGGTTTAGCCTCCTTGAT 57.991 45.455 3.32 0.00 37.43 2.57
3381 3807 3.967987 TCTAGGGTTTAGCCTCCTTGATC 59.032 47.826 3.32 0.00 37.43 2.92
3382 3808 2.852130 AGGGTTTAGCCTCCTTGATCT 58.148 47.619 0.00 0.00 37.43 2.75
3383 3809 2.774809 AGGGTTTAGCCTCCTTGATCTC 59.225 50.000 0.00 0.00 37.43 2.75
3384 3810 2.483889 GGGTTTAGCCTCCTTGATCTCG 60.484 54.545 0.00 0.00 37.43 4.04
3385 3811 2.168728 GGTTTAGCCTCCTTGATCTCGT 59.831 50.000 0.00 0.00 0.00 4.18
3386 3812 3.190874 GTTTAGCCTCCTTGATCTCGTG 58.809 50.000 0.00 0.00 0.00 4.35
3387 3813 1.403814 TAGCCTCCTTGATCTCGTGG 58.596 55.000 0.00 0.00 0.00 4.94
3388 3814 0.616111 AGCCTCCTTGATCTCGTGGT 60.616 55.000 0.00 0.00 0.00 4.16
3389 3815 1.112113 GCCTCCTTGATCTCGTGGTA 58.888 55.000 0.00 0.00 0.00 3.25
3390 3816 1.067821 GCCTCCTTGATCTCGTGGTAG 59.932 57.143 0.00 0.00 0.00 3.18
3391 3817 2.656002 CCTCCTTGATCTCGTGGTAGA 58.344 52.381 0.00 0.00 0.00 2.59
3392 3818 3.226777 CCTCCTTGATCTCGTGGTAGAT 58.773 50.000 0.00 0.00 38.95 1.98
3396 3822 3.777016 GATCTCGTGGTAGATCCGC 57.223 57.895 3.01 0.00 44.10 5.54
3397 3823 1.240256 GATCTCGTGGTAGATCCGCT 58.760 55.000 3.01 0.00 44.10 5.52
3398 3824 1.198178 GATCTCGTGGTAGATCCGCTC 59.802 57.143 3.01 0.00 44.10 5.03
3399 3825 0.180642 TCTCGTGGTAGATCCGCTCT 59.819 55.000 0.00 0.00 43.94 4.09
3400 3826 1.025812 CTCGTGGTAGATCCGCTCTT 58.974 55.000 0.00 0.00 43.94 2.85
3401 3827 0.738975 TCGTGGTAGATCCGCTCTTG 59.261 55.000 0.00 0.00 43.94 3.02
3402 3828 0.456221 CGTGGTAGATCCGCTCTTGT 59.544 55.000 0.00 0.00 43.94 3.16
3403 3829 1.674441 CGTGGTAGATCCGCTCTTGTA 59.326 52.381 0.00 0.00 43.94 2.41
3404 3830 2.098607 CGTGGTAGATCCGCTCTTGTAA 59.901 50.000 0.00 0.00 43.94 2.41
3405 3831 3.243434 CGTGGTAGATCCGCTCTTGTAAT 60.243 47.826 0.00 0.00 43.94 1.89
3406 3832 4.023450 CGTGGTAGATCCGCTCTTGTAATA 60.023 45.833 0.00 0.00 43.94 0.98
3407 3833 5.221130 GTGGTAGATCCGCTCTTGTAATAC 58.779 45.833 0.00 0.00 42.91 1.89
3408 3834 4.891168 TGGTAGATCCGCTCTTGTAATACA 59.109 41.667 0.00 0.00 39.52 2.29
3409 3835 5.221130 GGTAGATCCGCTCTTGTAATACAC 58.779 45.833 0.00 0.00 35.28 2.90
3410 3836 5.221185 GGTAGATCCGCTCTTGTAATACACA 60.221 44.000 0.00 0.00 35.28 3.72
3411 3837 5.537300 AGATCCGCTCTTGTAATACACAT 57.463 39.130 0.00 0.00 36.90 3.21
3412 3838 5.533482 AGATCCGCTCTTGTAATACACATC 58.467 41.667 0.00 0.00 36.90 3.06
3413 3839 4.729227 TCCGCTCTTGTAATACACATCA 57.271 40.909 0.00 0.00 36.90 3.07
3414 3840 5.276461 TCCGCTCTTGTAATACACATCAT 57.724 39.130 0.00 0.00 36.90 2.45
3415 3841 5.289595 TCCGCTCTTGTAATACACATCATC 58.710 41.667 0.00 0.00 36.90 2.92
3416 3842 5.049828 CCGCTCTTGTAATACACATCATCA 58.950 41.667 0.00 0.00 36.90 3.07
3417 3843 5.523552 CCGCTCTTGTAATACACATCATCAA 59.476 40.000 0.00 0.00 36.90 2.57
3418 3844 6.203530 CCGCTCTTGTAATACACATCATCAAT 59.796 38.462 0.00 0.00 36.90 2.57
3419 3845 7.384932 CCGCTCTTGTAATACACATCATCAATA 59.615 37.037 0.00 0.00 36.90 1.90
3420 3846 8.929746 CGCTCTTGTAATACACATCATCAATAT 58.070 33.333 0.00 0.00 36.90 1.28
3438 3864 7.946655 TCAATATTAATTGAGCAGGACGTAG 57.053 36.000 0.00 0.00 45.17 3.51
3439 3865 6.929049 TCAATATTAATTGAGCAGGACGTAGG 59.071 38.462 0.00 0.00 45.17 3.18
3440 3866 3.536956 TTAATTGAGCAGGACGTAGGG 57.463 47.619 0.00 0.00 0.00 3.53
3441 3867 1.276622 AATTGAGCAGGACGTAGGGT 58.723 50.000 0.00 0.00 0.00 4.34
3442 3868 1.276622 ATTGAGCAGGACGTAGGGTT 58.723 50.000 0.00 0.00 0.00 4.11
3443 3869 1.053424 TTGAGCAGGACGTAGGGTTT 58.947 50.000 0.00 0.00 0.00 3.27
3444 3870 1.053424 TGAGCAGGACGTAGGGTTTT 58.947 50.000 0.00 0.00 0.00 2.43
3445 3871 2.250031 TGAGCAGGACGTAGGGTTTTA 58.750 47.619 0.00 0.00 0.00 1.52
3446 3872 2.028748 TGAGCAGGACGTAGGGTTTTAC 60.029 50.000 0.00 0.00 0.00 2.01
3447 3873 1.277273 AGCAGGACGTAGGGTTTTACC 59.723 52.381 0.00 0.00 37.60 2.85
3448 3874 1.277273 GCAGGACGTAGGGTTTTACCT 59.723 52.381 0.00 0.00 44.75 3.08
3449 3875 2.676176 GCAGGACGTAGGGTTTTACCTC 60.676 54.545 0.00 0.00 42.09 3.85
3450 3876 2.093816 CAGGACGTAGGGTTTTACCTCC 60.094 54.545 0.00 0.00 42.09 4.30
3451 3877 1.901833 GGACGTAGGGTTTTACCTCCA 59.098 52.381 0.00 0.00 42.09 3.86
3452 3878 2.502947 GGACGTAGGGTTTTACCTCCAT 59.497 50.000 0.00 0.00 42.09 3.41
3453 3879 3.431346 GGACGTAGGGTTTTACCTCCATC 60.431 52.174 0.00 0.00 42.09 3.51
3454 3880 3.175594 ACGTAGGGTTTTACCTCCATCA 58.824 45.455 0.00 0.00 42.09 3.07
3455 3881 3.583966 ACGTAGGGTTTTACCTCCATCAA 59.416 43.478 0.00 0.00 42.09 2.57
3456 3882 4.189231 CGTAGGGTTTTACCTCCATCAAG 58.811 47.826 0.00 0.00 42.09 3.02
3457 3883 4.081309 CGTAGGGTTTTACCTCCATCAAGA 60.081 45.833 0.00 0.00 42.09 3.02
3458 3884 4.576330 AGGGTTTTACCTCCATCAAGAG 57.424 45.455 0.00 0.00 38.64 2.85
3465 3891 2.612760 CTCCATCAAGAGGGCCTGA 58.387 57.895 12.95 2.79 31.15 3.86
3466 3892 0.914644 CTCCATCAAGAGGGCCTGAA 59.085 55.000 12.95 0.00 31.15 3.02
3467 3893 0.620556 TCCATCAAGAGGGCCTGAAC 59.379 55.000 12.95 0.00 31.15 3.18
3468 3894 0.394899 CCATCAAGAGGGCCTGAACC 60.395 60.000 12.95 0.00 0.00 3.62
3469 3895 0.622665 CATCAAGAGGGCCTGAACCT 59.377 55.000 12.95 0.00 42.18 3.50
3470 3896 0.622665 ATCAAGAGGGCCTGAACCTG 59.377 55.000 12.95 0.00 38.79 4.00
3471 3897 1.001641 CAAGAGGGCCTGAACCTGG 60.002 63.158 12.95 0.00 38.79 4.45
3472 3898 2.234296 AAGAGGGCCTGAACCTGGG 61.234 63.158 12.95 0.00 38.79 4.45
3473 3899 2.936032 GAGGGCCTGAACCTGGGT 60.936 66.667 12.95 0.00 38.79 4.51
3474 3900 1.615424 GAGGGCCTGAACCTGGGTA 60.615 63.158 12.95 0.00 38.79 3.69
3475 3901 1.151677 AGGGCCTGAACCTGGGTAA 60.152 57.895 4.50 0.00 36.85 2.85
3476 3902 0.774491 AGGGCCTGAACCTGGGTAAA 60.774 55.000 4.50 0.00 36.85 2.01
3477 3903 0.113580 GGGCCTGAACCTGGGTAAAA 59.886 55.000 0.84 0.00 0.00 1.52
3478 3904 1.254026 GGCCTGAACCTGGGTAAAAC 58.746 55.000 0.00 0.00 0.00 2.43
3479 3905 1.479757 GGCCTGAACCTGGGTAAAACA 60.480 52.381 0.00 0.00 0.00 2.83
3480 3906 2.525368 GCCTGAACCTGGGTAAAACAT 58.475 47.619 0.00 0.00 0.00 2.71
3481 3907 2.492088 GCCTGAACCTGGGTAAAACATC 59.508 50.000 0.00 0.00 0.00 3.06
3482 3908 2.747446 CCTGAACCTGGGTAAAACATCG 59.253 50.000 0.00 0.00 0.00 3.84
3483 3909 3.408634 CTGAACCTGGGTAAAACATCGT 58.591 45.455 0.00 0.00 0.00 3.73
3484 3910 3.142951 TGAACCTGGGTAAAACATCGTG 58.857 45.455 0.00 0.00 0.00 4.35
3485 3911 2.943036 ACCTGGGTAAAACATCGTGT 57.057 45.000 0.00 0.00 0.00 4.49
3486 3912 3.217681 ACCTGGGTAAAACATCGTGTT 57.782 42.857 0.00 0.00 43.41 3.32
3487 3913 3.143728 ACCTGGGTAAAACATCGTGTTC 58.856 45.455 0.00 0.00 40.14 3.18
3488 3914 2.486592 CCTGGGTAAAACATCGTGTTCC 59.513 50.000 4.28 2.91 40.14 3.62
3489 3915 3.408634 CTGGGTAAAACATCGTGTTCCT 58.591 45.455 4.28 0.00 40.14 3.36
3490 3916 3.818773 CTGGGTAAAACATCGTGTTCCTT 59.181 43.478 4.28 0.44 40.14 3.36
3491 3917 3.566322 TGGGTAAAACATCGTGTTCCTTG 59.434 43.478 4.28 0.00 40.14 3.61
3492 3918 3.566742 GGGTAAAACATCGTGTTCCTTGT 59.433 43.478 4.28 0.00 40.14 3.16
3493 3919 4.319984 GGGTAAAACATCGTGTTCCTTGTC 60.320 45.833 4.28 0.00 40.14 3.18
3494 3920 4.514066 GGTAAAACATCGTGTTCCTTGTCT 59.486 41.667 4.28 0.00 40.14 3.41
3495 3921 4.813296 AAAACATCGTGTTCCTTGTCTC 57.187 40.909 4.28 0.00 40.14 3.36
3496 3922 2.457366 ACATCGTGTTCCTTGTCTCC 57.543 50.000 0.00 0.00 0.00 3.71
3497 3923 1.971357 ACATCGTGTTCCTTGTCTCCT 59.029 47.619 0.00 0.00 0.00 3.69
3498 3924 2.289072 ACATCGTGTTCCTTGTCTCCTG 60.289 50.000 0.00 0.00 0.00 3.86
3499 3925 1.410004 TCGTGTTCCTTGTCTCCTGT 58.590 50.000 0.00 0.00 0.00 4.00
3500 3926 1.760613 TCGTGTTCCTTGTCTCCTGTT 59.239 47.619 0.00 0.00 0.00 3.16
3501 3927 2.960384 TCGTGTTCCTTGTCTCCTGTTA 59.040 45.455 0.00 0.00 0.00 2.41
3502 3928 3.057734 CGTGTTCCTTGTCTCCTGTTAC 58.942 50.000 0.00 0.00 0.00 2.50
3503 3929 3.400255 GTGTTCCTTGTCTCCTGTTACC 58.600 50.000 0.00 0.00 0.00 2.85
3504 3930 3.042682 TGTTCCTTGTCTCCTGTTACCA 58.957 45.455 0.00 0.00 0.00 3.25
3505 3931 3.650942 TGTTCCTTGTCTCCTGTTACCAT 59.349 43.478 0.00 0.00 0.00 3.55
3506 3932 4.254492 GTTCCTTGTCTCCTGTTACCATC 58.746 47.826 0.00 0.00 0.00 3.51
3507 3933 2.838202 TCCTTGTCTCCTGTTACCATCC 59.162 50.000 0.00 0.00 0.00 3.51
3508 3934 2.418746 CCTTGTCTCCTGTTACCATCCG 60.419 54.545 0.00 0.00 0.00 4.18
3509 3935 0.535335 TGTCTCCTGTTACCATCCGC 59.465 55.000 0.00 0.00 0.00 5.54
3510 3936 0.179081 GTCTCCTGTTACCATCCGCC 60.179 60.000 0.00 0.00 0.00 6.13
3511 3937 0.325296 TCTCCTGTTACCATCCGCCT 60.325 55.000 0.00 0.00 0.00 5.52
3512 3938 1.063492 TCTCCTGTTACCATCCGCCTA 60.063 52.381 0.00 0.00 0.00 3.93
3513 3939 1.341531 CTCCTGTTACCATCCGCCTAG 59.658 57.143 0.00 0.00 0.00 3.02
3514 3940 1.063492 TCCTGTTACCATCCGCCTAGA 60.063 52.381 0.00 0.00 0.00 2.43
3515 3941 1.068741 CCTGTTACCATCCGCCTAGAC 59.931 57.143 0.00 0.00 0.00 2.59
3516 3942 1.754803 CTGTTACCATCCGCCTAGACA 59.245 52.381 0.00 0.00 0.00 3.41
3517 3943 1.479323 TGTTACCATCCGCCTAGACAC 59.521 52.381 0.00 0.00 0.00 3.67
3518 3944 1.479323 GTTACCATCCGCCTAGACACA 59.521 52.381 0.00 0.00 0.00 3.72
3519 3945 1.108776 TACCATCCGCCTAGACACAC 58.891 55.000 0.00 0.00 0.00 3.82
3520 3946 0.902984 ACCATCCGCCTAGACACACA 60.903 55.000 0.00 0.00 0.00 3.72
3521 3947 0.179100 CCATCCGCCTAGACACACAG 60.179 60.000 0.00 0.00 0.00 3.66
3522 3948 0.532573 CATCCGCCTAGACACACAGT 59.467 55.000 0.00 0.00 0.00 3.55
3523 3949 1.066858 CATCCGCCTAGACACACAGTT 60.067 52.381 0.00 0.00 0.00 3.16
3524 3950 0.601558 TCCGCCTAGACACACAGTTC 59.398 55.000 0.00 0.00 0.00 3.01
3525 3951 0.732880 CCGCCTAGACACACAGTTCG 60.733 60.000 0.00 0.00 0.00 3.95
3526 3952 0.732880 CGCCTAGACACACAGTTCGG 60.733 60.000 0.00 0.00 0.00 4.30
3527 3953 0.389948 GCCTAGACACACAGTTCGGG 60.390 60.000 0.00 0.00 0.00 5.14
3528 3954 1.254026 CCTAGACACACAGTTCGGGA 58.746 55.000 0.00 0.00 0.00 5.14
3529 3955 1.067776 CCTAGACACACAGTTCGGGAC 60.068 57.143 0.00 0.00 0.00 4.46
3530 3956 0.963962 TAGACACACAGTTCGGGACC 59.036 55.000 0.00 0.00 0.00 4.46
3531 3957 1.301479 GACACACAGTTCGGGACCC 60.301 63.158 0.00 0.00 0.00 4.46
3532 3958 2.032071 CACACAGTTCGGGACCCC 59.968 66.667 4.46 0.00 0.00 4.95
3533 3959 3.246880 ACACAGTTCGGGACCCCC 61.247 66.667 4.46 0.00 41.09 5.40
3534 3960 2.928396 CACAGTTCGGGACCCCCT 60.928 66.667 4.46 0.00 42.67 4.79
3535 3961 1.611261 CACAGTTCGGGACCCCCTA 60.611 63.158 4.46 0.00 42.67 3.53
3536 3962 1.611556 ACAGTTCGGGACCCCCTAC 60.612 63.158 4.46 0.29 42.67 3.18
3537 3963 2.040114 AGTTCGGGACCCCCTACC 59.960 66.667 4.46 0.00 42.67 3.18
3538 3964 3.085947 GTTCGGGACCCCCTACCC 61.086 72.222 4.46 0.00 42.67 3.69
3544 3970 1.533513 GGACCCCCTACCCGAGATC 60.534 68.421 0.00 0.00 0.00 2.75
3613 4039 3.902063 CGCACACGAATCCGCTCG 61.902 66.667 0.00 0.00 43.93 5.03
3714 4140 0.532573 GGAGCCGAACACTGATCTCA 59.467 55.000 0.00 0.00 0.00 3.27
3827 4253 1.672030 CATGGAGTTCACCGCTGCA 60.672 57.895 0.00 0.00 38.60 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.768870 CCCCATCCTCACGTCCTTATT 59.231 52.381 0.00 0.00 0.00 1.40
258 262 3.873952 GCCAGTACCTCATTGTTCTCATC 59.126 47.826 0.00 0.00 0.00 2.92
316 320 1.009829 CATTTACGCTCCTGGCAGTC 58.990 55.000 14.43 1.20 41.91 3.51
747 752 2.107204 GGTACATCGACCTACTCCCCTA 59.893 54.545 0.00 0.00 36.47 3.53
795 800 1.362932 ACCTCCCTCCTCTGCTTCTTA 59.637 52.381 0.00 0.00 0.00 2.10
880 885 4.159506 CCCTTCTCATCTCTCTTTCGAACT 59.840 45.833 0.00 0.00 0.00 3.01
1202 1207 2.870161 CGTGGCTTCGACGACTCG 60.870 66.667 4.79 4.79 39.21 4.18
1212 1217 4.612412 TTTCGGTCGGCGTGGCTT 62.612 61.111 6.85 0.00 0.00 4.35
1286 1291 3.178540 AAGGCTGGCGTTCCTCGTT 62.179 57.895 0.00 0.00 42.13 3.85
2689 2751 3.113322 CGCGCTACTGCTATCAACTTAA 58.887 45.455 5.56 0.00 36.97 1.85
2868 3294 2.745821 GGTTAAAAACCCTCGCTACTGG 59.254 50.000 0.00 0.00 46.12 4.00
2915 3341 2.354805 CGCACTACTAGGGAAAAGGCTT 60.355 50.000 0.00 0.00 0.00 4.35
2936 3362 1.363443 CTCCAGATCGAGCAGGCTC 59.637 63.158 7.31 11.21 39.55 4.70
2937 3363 2.132996 CCTCCAGATCGAGCAGGCT 61.133 63.158 7.31 0.00 0.00 4.58
3093 3519 4.051932 GACACCCCCTAGTCCAGG 57.948 66.667 0.00 0.00 45.07 4.45
3097 3523 2.056815 GTCCGGACACCCCCTAGTC 61.057 68.421 29.75 0.00 0.00 2.59
3098 3524 2.038490 GTCCGGACACCCCCTAGT 59.962 66.667 29.75 0.00 0.00 2.57
3099 3525 2.038329 TGTCCGGACACCCCCTAG 59.962 66.667 33.23 0.00 36.21 3.02
3100 3526 2.038329 CTGTCCGGACACCCCCTA 59.962 66.667 33.23 10.87 36.21 3.53
3112 3538 0.039074 CGATGATAGTCCGGCTGTCC 60.039 60.000 16.04 5.15 34.84 4.02
3113 3539 0.669077 ACGATGATAGTCCGGCTGTC 59.331 55.000 13.21 13.21 36.09 3.51
3114 3540 0.669077 GACGATGATAGTCCGGCTGT 59.331 55.000 0.00 0.00 32.78 4.40
3115 3541 3.481009 GACGATGATAGTCCGGCTG 57.519 57.895 0.00 0.00 32.78 4.85
3132 3558 2.488771 TAGTCTTGGAGTCCGGCGGA 62.489 60.000 27.46 27.46 0.00 5.54
3133 3559 2.050350 TAGTCTTGGAGTCCGGCGG 61.050 63.158 22.51 22.51 0.00 6.13
3134 3560 1.139095 GTAGTCTTGGAGTCCGGCG 59.861 63.158 4.30 0.00 0.00 6.46
3135 3561 1.139095 CGTAGTCTTGGAGTCCGGC 59.861 63.158 4.30 0.00 0.00 6.13
3136 3562 1.132643 CTTCGTAGTCTTGGAGTCCGG 59.867 57.143 4.30 0.00 0.00 5.14
3137 3563 2.082231 TCTTCGTAGTCTTGGAGTCCG 58.918 52.381 4.30 0.00 0.00 4.79
3138 3564 4.639310 TGTATCTTCGTAGTCTTGGAGTCC 59.361 45.833 0.73 0.73 0.00 3.85
3139 3565 5.814764 TGTATCTTCGTAGTCTTGGAGTC 57.185 43.478 0.00 0.00 0.00 3.36
3140 3566 5.944599 TCTTGTATCTTCGTAGTCTTGGAGT 59.055 40.000 0.00 0.00 0.00 3.85
3141 3567 6.438259 TCTTGTATCTTCGTAGTCTTGGAG 57.562 41.667 0.00 0.00 0.00 3.86
3142 3568 7.122204 TCAATCTTGTATCTTCGTAGTCTTGGA 59.878 37.037 0.00 0.00 0.00 3.53
3143 3569 7.258441 TCAATCTTGTATCTTCGTAGTCTTGG 58.742 38.462 0.00 0.00 0.00 3.61
3144 3570 8.689251 TTCAATCTTGTATCTTCGTAGTCTTG 57.311 34.615 0.00 0.00 0.00 3.02
3145 3571 8.740906 TCTTCAATCTTGTATCTTCGTAGTCTT 58.259 33.333 0.00 0.00 0.00 3.01
3146 3572 8.185505 GTCTTCAATCTTGTATCTTCGTAGTCT 58.814 37.037 0.00 0.00 0.00 3.24
3147 3573 8.185505 AGTCTTCAATCTTGTATCTTCGTAGTC 58.814 37.037 0.00 0.00 0.00 2.59
3148 3574 8.057536 AGTCTTCAATCTTGTATCTTCGTAGT 57.942 34.615 0.00 0.00 0.00 2.73
3149 3575 7.646130 GGAGTCTTCAATCTTGTATCTTCGTAG 59.354 40.741 0.00 0.00 0.00 3.51
3150 3576 7.481642 GGAGTCTTCAATCTTGTATCTTCGTA 58.518 38.462 0.00 0.00 0.00 3.43
3151 3577 6.334202 GGAGTCTTCAATCTTGTATCTTCGT 58.666 40.000 0.00 0.00 0.00 3.85
3152 3578 5.457148 CGGAGTCTTCAATCTTGTATCTTCG 59.543 44.000 0.00 0.00 0.00 3.79
3153 3579 6.334202 ACGGAGTCTTCAATCTTGTATCTTC 58.666 40.000 0.00 0.00 29.74 2.87
3154 3580 6.287589 ACGGAGTCTTCAATCTTGTATCTT 57.712 37.500 0.00 0.00 29.74 2.40
3155 3581 5.923733 ACGGAGTCTTCAATCTTGTATCT 57.076 39.130 0.00 0.00 29.74 1.98
3184 3610 0.618458 CAAGGAAAGTCCCATCCGGA 59.382 55.000 6.61 6.61 40.78 5.14
3185 3611 0.394352 CCAAGGAAAGTCCCATCCGG 60.394 60.000 0.00 0.00 40.78 5.14
3186 3612 1.032114 GCCAAGGAAAGTCCCATCCG 61.032 60.000 0.00 0.00 40.78 4.18
3187 3613 1.032114 CGCCAAGGAAAGTCCCATCC 61.032 60.000 0.00 0.00 37.19 3.51
3188 3614 0.322546 ACGCCAAGGAAAGTCCCATC 60.323 55.000 0.00 0.00 37.19 3.51
3189 3615 0.609131 CACGCCAAGGAAAGTCCCAT 60.609 55.000 0.00 0.00 37.19 4.00
3190 3616 1.228124 CACGCCAAGGAAAGTCCCA 60.228 57.895 0.00 0.00 37.19 4.37
3191 3617 1.971695 CCACGCCAAGGAAAGTCCC 60.972 63.158 0.00 0.00 37.19 4.46
3192 3618 0.536460 TTCCACGCCAAGGAAAGTCC 60.536 55.000 0.00 0.00 41.94 3.85
3193 3619 0.875059 CTTCCACGCCAAGGAAAGTC 59.125 55.000 0.00 0.00 44.07 3.01
3194 3620 0.537371 CCTTCCACGCCAAGGAAAGT 60.537 55.000 2.12 0.00 44.07 2.66
3195 3621 1.866853 GCCTTCCACGCCAAGGAAAG 61.867 60.000 10.97 2.24 44.07 2.62
3196 3622 1.901464 GCCTTCCACGCCAAGGAAA 60.901 57.895 10.97 0.00 44.07 3.13
3197 3623 2.282180 GCCTTCCACGCCAAGGAA 60.282 61.111 10.97 5.63 42.94 3.36
3198 3624 3.126703 TTGCCTTCCACGCCAAGGA 62.127 57.895 10.97 0.00 42.94 3.36
3199 3625 2.597217 TTGCCTTCCACGCCAAGG 60.597 61.111 3.73 3.73 43.13 3.61
3200 3626 2.956987 CTTGCCTTCCACGCCAAG 59.043 61.111 0.00 0.00 0.00 3.61
3201 3627 3.294493 GCTTGCCTTCCACGCCAA 61.294 61.111 0.00 0.00 32.93 4.52
3202 3628 3.790416 AAGCTTGCCTTCCACGCCA 62.790 57.895 0.00 0.00 39.36 5.69
3203 3629 2.985847 AAGCTTGCCTTCCACGCC 60.986 61.111 0.00 0.00 39.36 5.68
3204 3630 2.256461 CAAGCTTGCCTTCCACGC 59.744 61.111 14.65 0.00 38.87 5.34
3205 3631 2.956987 CCAAGCTTGCCTTCCACG 59.043 61.111 21.43 0.62 0.00 4.94
3206 3632 1.747325 TTGCCAAGCTTGCCTTCCAC 61.747 55.000 21.43 4.32 0.00 4.02
3207 3633 0.832983 ATTGCCAAGCTTGCCTTCCA 60.833 50.000 21.43 9.04 0.00 3.53
3208 3634 1.134995 GTATTGCCAAGCTTGCCTTCC 60.135 52.381 21.43 6.63 0.00 3.46
3209 3635 1.468054 CGTATTGCCAAGCTTGCCTTC 60.468 52.381 21.43 9.67 0.00 3.46
3210 3636 0.527565 CGTATTGCCAAGCTTGCCTT 59.472 50.000 21.43 7.68 0.00 4.35
3211 3637 1.315257 CCGTATTGCCAAGCTTGCCT 61.315 55.000 21.43 7.17 0.00 4.75
3212 3638 1.139520 CCGTATTGCCAAGCTTGCC 59.860 57.895 21.43 11.17 0.00 4.52
3213 3639 0.740737 ATCCGTATTGCCAAGCTTGC 59.259 50.000 21.43 16.17 0.00 4.01
3214 3640 3.565482 ACATATCCGTATTGCCAAGCTTG 59.435 43.478 19.93 19.93 0.00 4.01
3215 3641 3.820557 ACATATCCGTATTGCCAAGCTT 58.179 40.909 0.00 0.00 0.00 3.74
3216 3642 3.492102 ACATATCCGTATTGCCAAGCT 57.508 42.857 0.00 0.00 0.00 3.74
3217 3643 4.566004 TCTACATATCCGTATTGCCAAGC 58.434 43.478 0.00 0.00 0.00 4.01
3218 3644 6.634805 AGATCTACATATCCGTATTGCCAAG 58.365 40.000 0.00 0.00 0.00 3.61
3219 3645 6.351033 GGAGATCTACATATCCGTATTGCCAA 60.351 42.308 0.00 0.00 30.60 4.52
3220 3646 5.127194 GGAGATCTACATATCCGTATTGCCA 59.873 44.000 0.00 0.00 30.60 4.92
3221 3647 5.361285 AGGAGATCTACATATCCGTATTGCC 59.639 44.000 7.93 0.00 44.22 4.52
3222 3648 6.458232 AGGAGATCTACATATCCGTATTGC 57.542 41.667 7.93 0.00 44.22 3.56
3223 3649 7.283354 TGCTAGGAGATCTACATATCCGTATTG 59.717 40.741 7.93 0.00 44.22 1.90
3224 3650 7.347252 TGCTAGGAGATCTACATATCCGTATT 58.653 38.462 7.93 0.00 44.22 1.89
3225 3651 6.901300 TGCTAGGAGATCTACATATCCGTAT 58.099 40.000 7.93 0.00 44.22 3.06
3226 3652 6.309389 TGCTAGGAGATCTACATATCCGTA 57.691 41.667 7.93 0.00 44.22 4.02
3227 3653 5.180810 TGCTAGGAGATCTACATATCCGT 57.819 43.478 7.93 0.00 44.22 4.69
3228 3654 6.096141 ACAATGCTAGGAGATCTACATATCCG 59.904 42.308 7.93 0.00 44.22 4.18
3229 3655 7.416964 ACAATGCTAGGAGATCTACATATCC 57.583 40.000 7.93 0.00 40.35 2.59
3230 3656 9.796120 GTTACAATGCTAGGAGATCTACATATC 57.204 37.037 7.93 0.00 0.00 1.63
3231 3657 9.540538 AGTTACAATGCTAGGAGATCTACATAT 57.459 33.333 7.93 0.00 0.00 1.78
3232 3658 8.797438 CAGTTACAATGCTAGGAGATCTACATA 58.203 37.037 7.93 0.00 0.00 2.29
3233 3659 7.507277 TCAGTTACAATGCTAGGAGATCTACAT 59.493 37.037 7.93 0.00 0.00 2.29
3234 3660 6.833933 TCAGTTACAATGCTAGGAGATCTACA 59.166 38.462 7.93 0.00 0.00 2.74
3235 3661 7.013846 AGTCAGTTACAATGCTAGGAGATCTAC 59.986 40.741 0.00 0.00 0.00 2.59
3236 3662 7.063593 AGTCAGTTACAATGCTAGGAGATCTA 58.936 38.462 0.00 0.00 0.00 1.98
3237 3663 5.896678 AGTCAGTTACAATGCTAGGAGATCT 59.103 40.000 0.00 0.00 0.00 2.75
3238 3664 6.040391 AGAGTCAGTTACAATGCTAGGAGATC 59.960 42.308 0.00 0.00 0.00 2.75
3239 3665 5.896678 AGAGTCAGTTACAATGCTAGGAGAT 59.103 40.000 0.00 0.00 0.00 2.75
3240 3666 5.265191 AGAGTCAGTTACAATGCTAGGAGA 58.735 41.667 0.00 0.00 0.00 3.71
3241 3667 5.590530 AGAGTCAGTTACAATGCTAGGAG 57.409 43.478 0.00 0.00 0.00 3.69
3242 3668 6.607600 ACATAGAGTCAGTTACAATGCTAGGA 59.392 38.462 0.00 0.00 0.00 2.94
3243 3669 6.810911 ACATAGAGTCAGTTACAATGCTAGG 58.189 40.000 0.00 0.00 0.00 3.02
3244 3670 9.239002 GTTACATAGAGTCAGTTACAATGCTAG 57.761 37.037 0.00 0.00 0.00 3.42
3245 3671 8.195436 GGTTACATAGAGTCAGTTACAATGCTA 58.805 37.037 0.00 0.00 0.00 3.49
3246 3672 7.042335 GGTTACATAGAGTCAGTTACAATGCT 58.958 38.462 0.00 0.00 0.00 3.79
3247 3673 6.258068 GGGTTACATAGAGTCAGTTACAATGC 59.742 42.308 0.00 0.00 0.00 3.56
3248 3674 7.556844 AGGGTTACATAGAGTCAGTTACAATG 58.443 38.462 0.00 0.00 0.00 2.82
3249 3675 7.735326 AGGGTTACATAGAGTCAGTTACAAT 57.265 36.000 0.00 0.00 0.00 2.71
3250 3676 7.147949 GCTAGGGTTACATAGAGTCAGTTACAA 60.148 40.741 0.00 0.00 0.00 2.41
3251 3677 6.320672 GCTAGGGTTACATAGAGTCAGTTACA 59.679 42.308 0.00 0.00 0.00 2.41
3252 3678 6.238981 GGCTAGGGTTACATAGAGTCAGTTAC 60.239 46.154 0.00 0.00 0.00 2.50
3253 3679 5.832060 GGCTAGGGTTACATAGAGTCAGTTA 59.168 44.000 0.00 0.00 0.00 2.24
3254 3680 4.650131 GGCTAGGGTTACATAGAGTCAGTT 59.350 45.833 0.00 0.00 0.00 3.16
3255 3681 4.216708 GGCTAGGGTTACATAGAGTCAGT 58.783 47.826 0.00 0.00 0.00 3.41
3256 3682 3.574826 GGGCTAGGGTTACATAGAGTCAG 59.425 52.174 0.00 0.00 0.00 3.51
3257 3683 3.206866 AGGGCTAGGGTTACATAGAGTCA 59.793 47.826 0.00 0.00 0.00 3.41
3258 3684 3.827876 GAGGGCTAGGGTTACATAGAGTC 59.172 52.174 0.00 0.00 0.00 3.36
3259 3685 3.467863 AGAGGGCTAGGGTTACATAGAGT 59.532 47.826 0.00 0.00 0.00 3.24
3260 3686 4.083565 GAGAGGGCTAGGGTTACATAGAG 58.916 52.174 0.00 0.00 0.00 2.43
3261 3687 3.181420 GGAGAGGGCTAGGGTTACATAGA 60.181 52.174 0.00 0.00 0.00 1.98
3262 3688 3.166679 GGAGAGGGCTAGGGTTACATAG 58.833 54.545 0.00 0.00 0.00 2.23
3263 3689 2.490351 CGGAGAGGGCTAGGGTTACATA 60.490 54.545 0.00 0.00 0.00 2.29
3264 3690 1.758123 CGGAGAGGGCTAGGGTTACAT 60.758 57.143 0.00 0.00 0.00 2.29
3265 3691 0.396695 CGGAGAGGGCTAGGGTTACA 60.397 60.000 0.00 0.00 0.00 2.41
3266 3692 0.106318 TCGGAGAGGGCTAGGGTTAC 60.106 60.000 0.00 0.00 0.00 2.50
3267 3693 0.858369 ATCGGAGAGGGCTAGGGTTA 59.142 55.000 0.00 0.00 43.63 2.85
3268 3694 0.760945 CATCGGAGAGGGCTAGGGTT 60.761 60.000 0.00 0.00 43.63 4.11
3269 3695 1.152440 CATCGGAGAGGGCTAGGGT 60.152 63.158 0.00 0.00 43.63 4.34
3270 3696 1.152440 ACATCGGAGAGGGCTAGGG 60.152 63.158 0.00 0.00 45.68 3.53
3271 3697 2.346597 GACATCGGAGAGGGCTAGG 58.653 63.158 0.00 0.00 46.46 3.02
3276 3702 5.715279 TGGTTTATATAGACATCGGAGAGGG 59.285 44.000 5.83 0.00 45.68 4.30
3278 3704 7.148154 CCTCTGGTTTATATAGACATCGGAGAG 60.148 44.444 14.78 11.11 43.63 3.20
3279 3705 6.659668 CCTCTGGTTTATATAGACATCGGAGA 59.340 42.308 14.78 5.06 45.75 3.71
3280 3706 6.127591 CCCTCTGGTTTATATAGACATCGGAG 60.128 46.154 5.83 8.10 0.00 4.63
3281 3707 5.715279 CCCTCTGGTTTATATAGACATCGGA 59.285 44.000 5.83 0.00 0.00 4.55
3282 3708 5.624738 GCCCTCTGGTTTATATAGACATCGG 60.625 48.000 5.83 1.09 0.00 4.18
3283 3709 5.186021 AGCCCTCTGGTTTATATAGACATCG 59.814 44.000 5.83 0.00 0.00 3.84
3284 3710 6.613153 AGCCCTCTGGTTTATATAGACATC 57.387 41.667 5.83 0.00 0.00 3.06
3285 3711 7.394144 AAAGCCCTCTGGTTTATATAGACAT 57.606 36.000 5.83 0.00 42.63 3.06
3286 3712 6.824958 AAAGCCCTCTGGTTTATATAGACA 57.175 37.500 5.83 0.00 42.63 3.41
3287 3713 7.964624 ACTAAAGCCCTCTGGTTTATATAGAC 58.035 38.462 0.00 0.00 43.76 2.59
3288 3714 7.234988 GGACTAAAGCCCTCTGGTTTATATAGA 59.765 40.741 0.00 0.00 43.76 1.98
3289 3715 7.016268 TGGACTAAAGCCCTCTGGTTTATATAG 59.984 40.741 0.00 0.00 43.76 1.31
3290 3716 6.847567 TGGACTAAAGCCCTCTGGTTTATATA 59.152 38.462 0.00 0.00 43.76 0.86
3291 3717 5.670361 TGGACTAAAGCCCTCTGGTTTATAT 59.330 40.000 0.00 0.00 43.76 0.86
3292 3718 5.034200 TGGACTAAAGCCCTCTGGTTTATA 58.966 41.667 0.00 0.00 43.76 0.98
3293 3719 3.850173 TGGACTAAAGCCCTCTGGTTTAT 59.150 43.478 0.00 0.00 43.76 1.40
3294 3720 3.253220 TGGACTAAAGCCCTCTGGTTTA 58.747 45.455 0.00 0.00 42.63 2.01
3295 3721 2.062636 TGGACTAAAGCCCTCTGGTTT 58.937 47.619 0.00 0.00 46.01 3.27
3296 3722 1.742308 TGGACTAAAGCCCTCTGGTT 58.258 50.000 0.00 0.00 35.85 3.67
3297 3723 1.972588 ATGGACTAAAGCCCTCTGGT 58.027 50.000 0.00 0.00 0.00 4.00
3298 3724 2.370189 CCTATGGACTAAAGCCCTCTGG 59.630 54.545 0.00 0.00 0.00 3.86
3299 3725 3.309296 TCCTATGGACTAAAGCCCTCTG 58.691 50.000 0.00 0.00 0.00 3.35
3300 3726 3.708236 TCCTATGGACTAAAGCCCTCT 57.292 47.619 0.00 0.00 0.00 3.69
3312 3738 6.147473 TGTAATGGAGGTTATGTCCTATGGA 58.853 40.000 0.00 0.00 38.02 3.41
3313 3739 6.433847 TGTAATGGAGGTTATGTCCTATGG 57.566 41.667 0.00 0.00 38.02 2.74
3314 3740 7.279615 TGTTGTAATGGAGGTTATGTCCTATG 58.720 38.462 0.00 0.00 38.02 2.23
3315 3741 7.446106 TGTTGTAATGGAGGTTATGTCCTAT 57.554 36.000 0.00 0.00 38.02 2.57
3316 3742 6.877668 TGTTGTAATGGAGGTTATGTCCTA 57.122 37.500 0.00 0.00 38.02 2.94
3317 3743 5.772393 TGTTGTAATGGAGGTTATGTCCT 57.228 39.130 0.00 0.00 40.97 3.85
3318 3744 6.601613 TGATTGTTGTAATGGAGGTTATGTCC 59.398 38.462 0.00 0.00 34.31 4.02
3319 3745 7.624360 TGATTGTTGTAATGGAGGTTATGTC 57.376 36.000 0.00 0.00 0.00 3.06
3320 3746 9.120538 GTATGATTGTTGTAATGGAGGTTATGT 57.879 33.333 0.00 0.00 0.00 2.29
3321 3747 8.567948 GGTATGATTGTTGTAATGGAGGTTATG 58.432 37.037 0.00 0.00 0.00 1.90
3322 3748 8.278639 TGGTATGATTGTTGTAATGGAGGTTAT 58.721 33.333 0.00 0.00 0.00 1.89
3323 3749 7.634718 TGGTATGATTGTTGTAATGGAGGTTA 58.365 34.615 0.00 0.00 0.00 2.85
3324 3750 6.489603 TGGTATGATTGTTGTAATGGAGGTT 58.510 36.000 0.00 0.00 0.00 3.50
3325 3751 6.073447 TGGTATGATTGTTGTAATGGAGGT 57.927 37.500 0.00 0.00 0.00 3.85
3326 3752 7.391554 CCTATGGTATGATTGTTGTAATGGAGG 59.608 40.741 0.00 0.00 0.00 4.30
3327 3753 7.094634 GCCTATGGTATGATTGTTGTAATGGAG 60.095 40.741 0.00 0.00 0.00 3.86
3328 3754 6.714810 GCCTATGGTATGATTGTTGTAATGGA 59.285 38.462 0.00 0.00 0.00 3.41
3329 3755 6.716628 AGCCTATGGTATGATTGTTGTAATGG 59.283 38.462 0.00 0.00 0.00 3.16
3330 3756 7.750229 AGCCTATGGTATGATTGTTGTAATG 57.250 36.000 0.00 0.00 0.00 1.90
3331 3757 7.607991 GCTAGCCTATGGTATGATTGTTGTAAT 59.392 37.037 2.29 0.00 0.00 1.89
3332 3758 6.934645 GCTAGCCTATGGTATGATTGTTGTAA 59.065 38.462 2.29 0.00 0.00 2.41
3333 3759 6.270000 AGCTAGCCTATGGTATGATTGTTGTA 59.730 38.462 12.13 0.00 0.00 2.41
3334 3760 5.072329 AGCTAGCCTATGGTATGATTGTTGT 59.928 40.000 12.13 0.00 0.00 3.32
3335 3761 5.555017 AGCTAGCCTATGGTATGATTGTTG 58.445 41.667 12.13 0.00 0.00 3.33
3336 3762 5.832539 AGCTAGCCTATGGTATGATTGTT 57.167 39.130 12.13 0.00 0.00 2.83
3337 3763 5.545723 AGAAGCTAGCCTATGGTATGATTGT 59.454 40.000 12.13 0.00 0.00 2.71
3338 3764 6.047511 AGAAGCTAGCCTATGGTATGATTG 57.952 41.667 12.13 0.00 0.00 2.67
3339 3765 6.382570 CCTAGAAGCTAGCCTATGGTATGATT 59.617 42.308 12.13 0.00 0.00 2.57
3340 3766 5.896678 CCTAGAAGCTAGCCTATGGTATGAT 59.103 44.000 12.13 0.00 0.00 2.45
3341 3767 5.265191 CCTAGAAGCTAGCCTATGGTATGA 58.735 45.833 12.13 0.00 0.00 2.15
3342 3768 4.404073 CCCTAGAAGCTAGCCTATGGTATG 59.596 50.000 12.13 0.00 0.00 2.39
3343 3769 4.046103 ACCCTAGAAGCTAGCCTATGGTAT 59.954 45.833 19.36 4.05 33.87 2.73
3344 3770 3.401683 ACCCTAGAAGCTAGCCTATGGTA 59.598 47.826 19.36 2.73 33.87 3.25
3345 3771 2.180308 ACCCTAGAAGCTAGCCTATGGT 59.820 50.000 12.13 15.16 31.76 3.55
3346 3772 2.896039 ACCCTAGAAGCTAGCCTATGG 58.104 52.381 12.13 14.55 0.00 2.74
3347 3773 4.965200 AAACCCTAGAAGCTAGCCTATG 57.035 45.455 12.13 3.90 0.00 2.23
3348 3774 4.528987 GCTAAACCCTAGAAGCTAGCCTAT 59.471 45.833 12.13 0.00 32.18 2.57
3349 3775 3.896272 GCTAAACCCTAGAAGCTAGCCTA 59.104 47.826 12.13 5.82 32.18 3.93
3350 3776 2.701423 GCTAAACCCTAGAAGCTAGCCT 59.299 50.000 12.13 4.79 32.18 4.58
3351 3777 2.224329 GGCTAAACCCTAGAAGCTAGCC 60.224 54.545 12.13 13.65 43.27 3.93
3352 3778 2.701423 AGGCTAAACCCTAGAAGCTAGC 59.299 50.000 6.62 6.62 40.58 3.42
3353 3779 3.322541 GGAGGCTAAACCCTAGAAGCTAG 59.677 52.174 0.00 0.00 40.58 3.42
3354 3780 3.052033 AGGAGGCTAAACCCTAGAAGCTA 60.052 47.826 0.00 0.00 40.58 3.32
3355 3781 2.120312 GGAGGCTAAACCCTAGAAGCT 58.880 52.381 0.00 0.00 40.58 3.74
3356 3782 2.120312 AGGAGGCTAAACCCTAGAAGC 58.880 52.381 0.00 0.00 40.58 3.86
3357 3783 3.775316 TCAAGGAGGCTAAACCCTAGAAG 59.225 47.826 0.00 0.00 40.58 2.85
3358 3784 3.798515 TCAAGGAGGCTAAACCCTAGAA 58.201 45.455 0.00 0.00 40.58 2.10
3359 3785 3.484953 TCAAGGAGGCTAAACCCTAGA 57.515 47.619 0.00 0.00 40.58 2.43
3360 3786 3.970640 AGATCAAGGAGGCTAAACCCTAG 59.029 47.826 0.00 0.00 40.58 3.02
3361 3787 3.967987 GAGATCAAGGAGGCTAAACCCTA 59.032 47.826 0.00 0.00 40.58 3.53
3362 3788 2.774809 GAGATCAAGGAGGCTAAACCCT 59.225 50.000 0.00 0.00 40.58 4.34
3363 3789 2.483889 CGAGATCAAGGAGGCTAAACCC 60.484 54.545 0.00 0.00 40.58 4.11
3364 3790 2.168728 ACGAGATCAAGGAGGCTAAACC 59.831 50.000 0.00 0.00 39.61 3.27
3365 3791 3.190874 CACGAGATCAAGGAGGCTAAAC 58.809 50.000 0.00 0.00 0.00 2.01
3366 3792 2.168521 CCACGAGATCAAGGAGGCTAAA 59.831 50.000 0.00 0.00 0.00 1.85
3367 3793 1.757118 CCACGAGATCAAGGAGGCTAA 59.243 52.381 0.00 0.00 0.00 3.09
3368 3794 1.342076 ACCACGAGATCAAGGAGGCTA 60.342 52.381 0.00 0.00 0.00 3.93
3369 3795 0.616111 ACCACGAGATCAAGGAGGCT 60.616 55.000 0.00 0.00 0.00 4.58
3370 3796 1.067821 CTACCACGAGATCAAGGAGGC 59.932 57.143 0.00 0.00 0.00 4.70
3371 3797 2.656002 TCTACCACGAGATCAAGGAGG 58.344 52.381 0.00 0.00 0.00 4.30
3379 3805 1.202830 AGAGCGGATCTACCACGAGAT 60.203 52.381 0.00 0.00 38.94 2.75
3380 3806 0.180642 AGAGCGGATCTACCACGAGA 59.819 55.000 0.00 0.00 36.10 4.04
3381 3807 1.025812 AAGAGCGGATCTACCACGAG 58.974 55.000 0.00 0.00 37.23 4.18
3382 3808 0.738975 CAAGAGCGGATCTACCACGA 59.261 55.000 0.00 0.00 37.23 4.35
3383 3809 0.456221 ACAAGAGCGGATCTACCACG 59.544 55.000 0.00 0.00 37.23 4.94
3384 3810 3.795623 TTACAAGAGCGGATCTACCAC 57.204 47.619 0.00 0.00 37.23 4.16
3385 3811 4.891168 TGTATTACAAGAGCGGATCTACCA 59.109 41.667 0.00 0.00 37.23 3.25
3386 3812 5.221130 GTGTATTACAAGAGCGGATCTACC 58.779 45.833 0.00 0.00 37.23 3.18
3387 3813 5.828747 TGTGTATTACAAGAGCGGATCTAC 58.171 41.667 0.00 0.00 37.23 2.59
3388 3814 6.264518 TGATGTGTATTACAAGAGCGGATCTA 59.735 38.462 0.00 0.00 43.77 1.98
3389 3815 5.069119 TGATGTGTATTACAAGAGCGGATCT 59.931 40.000 0.00 0.00 43.77 2.75
3390 3816 5.289595 TGATGTGTATTACAAGAGCGGATC 58.710 41.667 0.00 0.00 43.77 3.36
3391 3817 5.276461 TGATGTGTATTACAAGAGCGGAT 57.724 39.130 0.00 0.00 43.77 4.18
3392 3818 4.729227 TGATGTGTATTACAAGAGCGGA 57.271 40.909 0.00 0.00 43.77 5.54
3393 3819 5.049828 TGATGATGTGTATTACAAGAGCGG 58.950 41.667 0.00 0.00 43.77 5.52
3394 3820 6.588348 TTGATGATGTGTATTACAAGAGCG 57.412 37.500 0.00 0.00 43.77 5.03
3406 3832 8.573885 CCTGCTCAATTAATATTGATGATGTGT 58.426 33.333 0.00 0.00 46.69 3.72
3407 3833 8.789762 TCCTGCTCAATTAATATTGATGATGTG 58.210 33.333 0.00 0.00 46.69 3.21
3408 3834 8.790718 GTCCTGCTCAATTAATATTGATGATGT 58.209 33.333 0.00 0.00 46.69 3.06
3409 3835 7.961283 CGTCCTGCTCAATTAATATTGATGATG 59.039 37.037 0.00 0.00 46.69 3.07
3410 3836 7.663081 ACGTCCTGCTCAATTAATATTGATGAT 59.337 33.333 0.00 0.00 46.69 2.45
3411 3837 6.992123 ACGTCCTGCTCAATTAATATTGATGA 59.008 34.615 0.00 0.00 46.69 2.92
3412 3838 7.194607 ACGTCCTGCTCAATTAATATTGATG 57.805 36.000 0.00 0.00 46.69 3.07
3413 3839 7.604164 CCTACGTCCTGCTCAATTAATATTGAT 59.396 37.037 0.00 0.00 46.69 2.57
3414 3840 6.929049 CCTACGTCCTGCTCAATTAATATTGA 59.071 38.462 0.00 0.00 45.99 2.57
3415 3841 6.147821 CCCTACGTCCTGCTCAATTAATATTG 59.852 42.308 0.00 0.00 42.06 1.90
3416 3842 6.183361 ACCCTACGTCCTGCTCAATTAATATT 60.183 38.462 0.00 0.00 0.00 1.28
3417 3843 5.307196 ACCCTACGTCCTGCTCAATTAATAT 59.693 40.000 0.00 0.00 0.00 1.28
3418 3844 4.652421 ACCCTACGTCCTGCTCAATTAATA 59.348 41.667 0.00 0.00 0.00 0.98
3419 3845 3.454812 ACCCTACGTCCTGCTCAATTAAT 59.545 43.478 0.00 0.00 0.00 1.40
3420 3846 2.835764 ACCCTACGTCCTGCTCAATTAA 59.164 45.455 0.00 0.00 0.00 1.40
3421 3847 2.463752 ACCCTACGTCCTGCTCAATTA 58.536 47.619 0.00 0.00 0.00 1.40
3422 3848 1.276622 ACCCTACGTCCTGCTCAATT 58.723 50.000 0.00 0.00 0.00 2.32
3423 3849 1.276622 AACCCTACGTCCTGCTCAAT 58.723 50.000 0.00 0.00 0.00 2.57
3424 3850 1.053424 AAACCCTACGTCCTGCTCAA 58.947 50.000 0.00 0.00 0.00 3.02
3425 3851 1.053424 AAAACCCTACGTCCTGCTCA 58.947 50.000 0.00 0.00 0.00 4.26
3426 3852 2.614779 GTAAAACCCTACGTCCTGCTC 58.385 52.381 0.00 0.00 0.00 4.26
3427 3853 1.277273 GGTAAAACCCTACGTCCTGCT 59.723 52.381 0.00 0.00 30.04 4.24
3428 3854 1.277273 AGGTAAAACCCTACGTCCTGC 59.723 52.381 0.00 0.00 39.75 4.85
3429 3855 2.093816 GGAGGTAAAACCCTACGTCCTG 60.094 54.545 12.88 0.00 46.43 3.86
3430 3856 2.182827 GGAGGTAAAACCCTACGTCCT 58.817 52.381 12.88 0.00 46.43 3.85
3431 3857 2.680312 GGAGGTAAAACCCTACGTCC 57.320 55.000 0.00 6.71 44.94 4.79
3432 3858 3.790091 GATGGAGGTAAAACCCTACGTC 58.210 50.000 0.00 0.00 42.79 4.34
3433 3859 3.175594 TGATGGAGGTAAAACCCTACGT 58.824 45.455 0.00 0.00 38.41 3.57
3434 3860 3.899052 TGATGGAGGTAAAACCCTACG 57.101 47.619 0.00 0.00 38.41 3.51
3435 3861 5.429130 CTCTTGATGGAGGTAAAACCCTAC 58.571 45.833 0.00 0.00 39.75 3.18
3436 3862 4.473559 CCTCTTGATGGAGGTAAAACCCTA 59.526 45.833 2.65 0.00 45.65 3.53
3437 3863 3.267031 CCTCTTGATGGAGGTAAAACCCT 59.733 47.826 2.65 0.00 45.65 4.34
3438 3864 3.621558 CCTCTTGATGGAGGTAAAACCC 58.378 50.000 2.65 0.00 45.65 4.11
3447 3873 0.914644 TTCAGGCCCTCTTGATGGAG 59.085 55.000 0.00 0.00 0.00 3.86
3448 3874 0.620556 GTTCAGGCCCTCTTGATGGA 59.379 55.000 0.00 0.00 0.00 3.41
3449 3875 0.394899 GGTTCAGGCCCTCTTGATGG 60.395 60.000 0.00 0.00 0.00 3.51
3450 3876 0.622665 AGGTTCAGGCCCTCTTGATG 59.377 55.000 0.00 0.00 0.00 3.07
3451 3877 0.622665 CAGGTTCAGGCCCTCTTGAT 59.377 55.000 0.00 0.00 0.00 2.57
3452 3878 1.492133 CCAGGTTCAGGCCCTCTTGA 61.492 60.000 0.00 0.00 0.00 3.02
3453 3879 1.001641 CCAGGTTCAGGCCCTCTTG 60.002 63.158 0.00 0.00 0.00 3.02
3454 3880 2.234296 CCCAGGTTCAGGCCCTCTT 61.234 63.158 0.00 0.00 0.00 2.85
3455 3881 2.119847 TACCCAGGTTCAGGCCCTCT 62.120 60.000 0.00 0.00 0.00 3.69
3456 3882 1.205460 TTACCCAGGTTCAGGCCCTC 61.205 60.000 0.00 0.00 0.00 4.30
3457 3883 0.774491 TTTACCCAGGTTCAGGCCCT 60.774 55.000 0.00 0.00 0.00 5.19
3458 3884 0.113580 TTTTACCCAGGTTCAGGCCC 59.886 55.000 0.00 0.00 0.00 5.80
3459 3885 1.254026 GTTTTACCCAGGTTCAGGCC 58.746 55.000 0.00 0.00 0.00 5.19
3460 3886 1.989706 TGTTTTACCCAGGTTCAGGC 58.010 50.000 0.00 0.00 0.00 4.85
3461 3887 2.747446 CGATGTTTTACCCAGGTTCAGG 59.253 50.000 0.00 0.00 0.00 3.86
3462 3888 3.188460 CACGATGTTTTACCCAGGTTCAG 59.812 47.826 0.00 0.00 0.00 3.02
3463 3889 3.142951 CACGATGTTTTACCCAGGTTCA 58.857 45.455 0.00 0.00 0.00 3.18
3464 3890 3.143728 ACACGATGTTTTACCCAGGTTC 58.856 45.455 0.00 0.00 0.00 3.62
3465 3891 3.217681 ACACGATGTTTTACCCAGGTT 57.782 42.857 0.00 0.00 0.00 3.50
3466 3892 2.943036 ACACGATGTTTTACCCAGGT 57.057 45.000 0.00 0.00 0.00 4.00
3467 3893 2.486592 GGAACACGATGTTTTACCCAGG 59.513 50.000 0.00 0.00 41.28 4.45
3468 3894 3.408634 AGGAACACGATGTTTTACCCAG 58.591 45.455 0.00 0.00 41.28 4.45
3469 3895 3.495434 AGGAACACGATGTTTTACCCA 57.505 42.857 0.00 0.00 41.28 4.51
3470 3896 3.566742 ACAAGGAACACGATGTTTTACCC 59.433 43.478 0.00 0.00 41.28 3.69
3471 3897 4.514066 AGACAAGGAACACGATGTTTTACC 59.486 41.667 0.00 0.00 41.28 2.85
3472 3898 5.333875 GGAGACAAGGAACACGATGTTTTAC 60.334 44.000 0.00 0.00 41.28 2.01
3473 3899 4.753107 GGAGACAAGGAACACGATGTTTTA 59.247 41.667 0.00 0.00 41.28 1.52
3474 3900 3.564225 GGAGACAAGGAACACGATGTTTT 59.436 43.478 0.00 0.00 41.28 2.43
3475 3901 3.139077 GGAGACAAGGAACACGATGTTT 58.861 45.455 0.00 0.00 41.28 2.83
3476 3902 2.368875 AGGAGACAAGGAACACGATGTT 59.631 45.455 3.52 3.52 44.37 2.71
3477 3903 1.971357 AGGAGACAAGGAACACGATGT 59.029 47.619 0.00 0.00 0.00 3.06
3478 3904 2.289072 ACAGGAGACAAGGAACACGATG 60.289 50.000 0.00 0.00 0.00 3.84
3479 3905 1.971357 ACAGGAGACAAGGAACACGAT 59.029 47.619 0.00 0.00 0.00 3.73
3480 3906 1.410004 ACAGGAGACAAGGAACACGA 58.590 50.000 0.00 0.00 0.00 4.35
3481 3907 2.240493 AACAGGAGACAAGGAACACG 57.760 50.000 0.00 0.00 0.00 4.49
3482 3908 3.181458 TGGTAACAGGAGACAAGGAACAC 60.181 47.826 0.00 0.00 46.17 3.32
3483 3909 3.042682 TGGTAACAGGAGACAAGGAACA 58.957 45.455 0.00 0.00 46.17 3.18
3484 3910 3.764237 TGGTAACAGGAGACAAGGAAC 57.236 47.619 0.00 0.00 46.17 3.62
3498 3924 1.479323 TGTGTCTAGGCGGATGGTAAC 59.521 52.381 0.00 0.00 0.00 2.50
3499 3925 1.479323 GTGTGTCTAGGCGGATGGTAA 59.521 52.381 0.00 0.00 0.00 2.85
3500 3926 1.108776 GTGTGTCTAGGCGGATGGTA 58.891 55.000 0.00 0.00 0.00 3.25
3501 3927 0.902984 TGTGTGTCTAGGCGGATGGT 60.903 55.000 0.00 0.00 0.00 3.55
3502 3928 0.179100 CTGTGTGTCTAGGCGGATGG 60.179 60.000 0.00 0.00 0.00 3.51
3503 3929 0.532573 ACTGTGTGTCTAGGCGGATG 59.467 55.000 0.00 0.00 0.00 3.51
3504 3930 1.204941 GAACTGTGTGTCTAGGCGGAT 59.795 52.381 0.00 0.00 0.00 4.18
3505 3931 0.601558 GAACTGTGTGTCTAGGCGGA 59.398 55.000 0.00 0.00 0.00 5.54
3506 3932 0.732880 CGAACTGTGTGTCTAGGCGG 60.733 60.000 0.00 0.00 0.00 6.13
3507 3933 0.732880 CCGAACTGTGTGTCTAGGCG 60.733 60.000 0.00 0.00 0.00 5.52
3508 3934 0.389948 CCCGAACTGTGTGTCTAGGC 60.390 60.000 0.00 0.00 0.00 3.93
3509 3935 1.067776 GTCCCGAACTGTGTGTCTAGG 60.068 57.143 0.00 0.00 0.00 3.02
3510 3936 1.067776 GGTCCCGAACTGTGTGTCTAG 60.068 57.143 0.00 0.00 0.00 2.43
3511 3937 0.963962 GGTCCCGAACTGTGTGTCTA 59.036 55.000 0.00 0.00 0.00 2.59
3512 3938 1.746517 GGTCCCGAACTGTGTGTCT 59.253 57.895 0.00 0.00 0.00 3.41
3513 3939 1.301479 GGGTCCCGAACTGTGTGTC 60.301 63.158 0.00 0.00 0.00 3.67
3514 3940 2.814835 GGGGTCCCGAACTGTGTGT 61.815 63.158 0.48 0.00 0.00 3.72
3515 3941 2.032071 GGGGTCCCGAACTGTGTG 59.968 66.667 0.48 0.00 0.00 3.82
3516 3942 3.246880 GGGGGTCCCGAACTGTGT 61.247 66.667 0.48 0.00 36.85 3.72
3525 3951 3.097429 ATCTCGGGTAGGGGGTCCC 62.097 68.421 0.00 0.00 45.90 4.46
3526 3952 1.533513 GATCTCGGGTAGGGGGTCC 60.534 68.421 0.00 0.00 0.00 4.46
3527 3953 1.533513 GGATCTCGGGTAGGGGGTC 60.534 68.421 0.00 0.00 0.00 4.46
3528 3954 2.019272 AGGATCTCGGGTAGGGGGT 61.019 63.158 0.00 0.00 0.00 4.95
3529 3955 1.534235 CAGGATCTCGGGTAGGGGG 60.534 68.421 0.00 0.00 0.00 5.40
3530 3956 0.828343 GACAGGATCTCGGGTAGGGG 60.828 65.000 0.00 0.00 0.00 4.79
3531 3957 0.106167 TGACAGGATCTCGGGTAGGG 60.106 60.000 0.00 0.00 0.00 3.53
3532 3958 1.033574 GTGACAGGATCTCGGGTAGG 58.966 60.000 0.00 0.00 0.00 3.18
3533 3959 0.663688 CGTGACAGGATCTCGGGTAG 59.336 60.000 0.00 0.00 39.98 3.18
3534 3960 0.253894 TCGTGACAGGATCTCGGGTA 59.746 55.000 0.00 0.00 43.08 3.69
3535 3961 0.395862 ATCGTGACAGGATCTCGGGT 60.396 55.000 4.80 0.00 43.08 5.28
3536 3962 0.031314 CATCGTGACAGGATCTCGGG 59.969 60.000 7.67 0.00 43.08 5.14
3537 3963 0.031314 CCATCGTGACAGGATCTCGG 59.969 60.000 7.67 3.53 43.08 4.63
3538 3964 0.031314 CCCATCGTGACAGGATCTCG 59.969 60.000 7.67 0.00 43.99 4.04
3539 3965 0.249657 GCCCATCGTGACAGGATCTC 60.250 60.000 7.67 0.00 0.00 2.75
3540 3966 0.977627 TGCCCATCGTGACAGGATCT 60.978 55.000 7.67 0.00 0.00 2.75
3541 3967 0.107456 ATGCCCATCGTGACAGGATC 59.893 55.000 7.67 0.00 0.00 3.36
3544 3970 0.179037 ATCATGCCCATCGTGACAGG 60.179 55.000 0.00 0.00 42.99 4.00
3678 4104 3.864686 CATCGCCGCGGAAGTTGG 61.865 66.667 33.48 8.58 0.00 3.77
3714 4140 4.527427 GGAGTTACGAGCTTTATAGGGGAT 59.473 45.833 0.00 0.00 0.00 3.85
3827 4253 1.674221 GGCGAGTGCTGAAAGATGTCT 60.674 52.381 0.00 0.00 42.25 3.41
3904 4330 2.808206 CCATCCTGGCCGTAGTCCC 61.808 68.421 0.00 0.00 0.00 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.