Multiple sequence alignment - TraesCS1B01G472600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G472600 chr1B 100.000 2579 0 0 1569 4147 680976755 680979333 0.000000e+00 4763.0
1 TraesCS1B01G472600 chr1B 100.000 1303 0 0 1 1303 680975187 680976489 0.000000e+00 2407.0
2 TraesCS1B01G472600 chr1A 94.909 1159 35 8 2528 3662 588118852 588117694 0.000000e+00 1792.0
3 TraesCS1B01G472600 chr1A 94.737 1159 37 7 2528 3662 588018876 588017718 0.000000e+00 1781.0
4 TraesCS1B01G472600 chr1A 92.308 1079 67 6 1 1076 588122013 588120948 0.000000e+00 1519.0
5 TraesCS1B01G472600 chr1A 92.012 338 21 5 2134 2470 588119361 588119029 1.750000e-128 470.0
6 TraesCS1B01G472600 chr1A 88.856 341 20 6 1794 2117 588119758 588119419 1.800000e-108 403.0
7 TraesCS1B01G472600 chr1A 90.868 219 12 4 1085 1303 588120208 588119998 1.890000e-73 287.0
8 TraesCS1B01G472600 chr1A 90.278 216 11 2 2258 2465 588019270 588019057 1.470000e-69 274.0
9 TraesCS1B01G472600 chr1A 87.200 250 15 5 1635 1877 588019575 588019336 6.830000e-68 268.0
10 TraesCS1B01G472600 chr1A 90.960 177 10 1 1598 1768 588119926 588119750 2.490000e-57 233.0
11 TraesCS1B01G472600 chr1A 84.181 177 10 9 1128 1303 588019763 588019604 5.550000e-34 156.0
12 TraesCS1B01G472600 chr1A 100.000 54 0 0 3661 3714 588017635 588017582 2.640000e-17 100.0
13 TraesCS1B01G472600 chr1A 100.000 52 0 0 3661 3712 588117606 588117555 3.410000e-16 97.1
14 TraesCS1B01G472600 chr1A 94.828 58 2 1 2468 2524 588119008 588118951 5.710000e-14 89.8
15 TraesCS1B01G472600 chr1D 90.612 1161 50 17 2528 3643 488777110 488775964 0.000000e+00 1485.0
16 TraesCS1B01G472600 chr1D 92.518 949 44 12 2537 3468 489106779 489107717 0.000000e+00 1334.0
17 TraesCS1B01G472600 chr1D 93.195 529 15 7 2528 3035 490105445 490105973 0.000000e+00 758.0
18 TraesCS1B01G472600 chr1D 88.848 547 48 8 1575 2117 489105657 489106194 0.000000e+00 660.0
19 TraesCS1B01G472600 chr1D 87.354 601 29 12 3033 3598 490118465 490119053 0.000000e+00 645.0
20 TraesCS1B01G472600 chr1D 89.276 373 40 0 1707 2079 488779641 488779269 6.280000e-128 468.0
21 TraesCS1B01G472600 chr1D 89.911 337 20 6 2134 2470 488777607 488777285 4.960000e-114 422.0
22 TraesCS1B01G472600 chr1D 87.749 351 14 14 2136 2470 489106259 489106596 2.340000e-102 383.0
23 TraesCS1B01G472600 chr1D 85.235 298 24 14 2173 2465 490104985 490105267 5.250000e-74 289.0
24 TraesCS1B01G472600 chr1D 89.831 177 12 1 1635 1805 490104745 490104921 5.400000e-54 222.0
25 TraesCS1B01G472600 chr1D 90.361 166 10 5 1113 1276 489105433 489105594 3.250000e-51 213.0
26 TraesCS1B01G472600 chr1D 91.935 124 9 1 498 621 67869109 67869231 5.510000e-39 172.0
27 TraesCS1B01G472600 chr1D 80.769 182 15 14 1126 1303 490104551 490104716 1.570000e-24 124.0
28 TraesCS1B01G472600 chr1D 92.647 68 3 1 3222 3287 488951315 488951382 3.410000e-16 97.1
29 TraesCS1B01G472600 chr1D 91.379 58 4 1 2468 2524 489106617 489106674 1.240000e-10 78.7
30 TraesCS1B01G472600 chr1D 91.379 58 4 1 2468 2524 490105292 490105349 1.240000e-10 78.7
31 TraesCS1B01G472600 chr1D 97.674 43 1 0 2075 2117 488777708 488777666 1.600000e-09 75.0
32 TraesCS1B01G472600 chr1D 100.000 29 0 0 3314 3342 488776394 488776366 2.000000e-03 54.7
33 TraesCS1B01G472600 chr2D 90.436 1077 97 4 1 1076 32631787 32632858 0.000000e+00 1413.0
34 TraesCS1B01G472600 chr2D 93.056 432 25 3 3716 4147 10309546 10309120 9.790000e-176 627.0
35 TraesCS1B01G472600 chr2D 93.039 431 27 1 3717 4147 587201003 587201430 9.790000e-176 627.0
36 TraesCS1B01G472600 chr3D 88.011 1126 102 16 1 1113 174083464 174082359 0.000000e+00 1301.0
37 TraesCS1B01G472600 chr6D 93.981 432 23 1 3716 4147 438805031 438804603 0.000000e+00 651.0
38 TraesCS1B01G472600 chr5D 93.318 434 26 1 3714 4147 537169518 537169088 4.520000e-179 638.0
39 TraesCS1B01G472600 chr5D 88.809 277 22 2 772 1040 398576400 398576125 8.590000e-87 331.0
40 TraesCS1B01G472600 chr4A 93.271 431 26 2 3717 4147 90432642 90432215 2.100000e-177 632.0
41 TraesCS1B01G472600 chr7A 92.890 436 27 2 3713 4147 408591921 408592353 7.570000e-177 630.0
42 TraesCS1B01G472600 chr7A 96.825 63 2 0 3218 3280 439001680 439001618 5.670000e-19 106.0
43 TraesCS1B01G472600 chr6A 92.627 434 28 2 3714 4147 19885817 19886246 4.550000e-174 621.0
44 TraesCS1B01G472600 chrUn 92.379 433 31 2 3717 4147 82690404 82690836 2.120000e-172 616.0
45 TraesCS1B01G472600 chr4B 92.575 431 29 1 3717 4147 339482865 339483292 2.120000e-172 616.0
46 TraesCS1B01G472600 chr5B 87.409 413 51 1 542 954 541629977 541629566 1.350000e-129 473.0
47 TraesCS1B01G472600 chr5B 92.647 272 20 0 308 579 33256735 33257006 3.890000e-105 392.0
48 TraesCS1B01G472600 chr5B 89.000 300 33 0 635 934 33257016 33257315 5.060000e-99 372.0
49 TraesCS1B01G472600 chr5B 92.045 264 20 1 760 1023 478561325 478561063 1.820000e-98 370.0
50 TraesCS1B01G472600 chr2A 91.638 287 23 1 788 1074 513841002 513840717 3.000000e-106 396.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G472600 chr1B 680975187 680979333 4146 False 3585.0000 4763 100.000000 1 4147 2 chr1B.!!$F1 4146
1 TraesCS1B01G472600 chr1A 588117555 588122013 4458 True 611.3625 1792 93.092625 1 3712 8 chr1A.!!$R2 3711
2 TraesCS1B01G472600 chr1A 588017582 588019763 2181 True 515.8000 1781 91.279200 1128 3714 5 chr1A.!!$R1 2586
3 TraesCS1B01G472600 chr1D 490118465 490119053 588 False 645.0000 645 87.354000 3033 3598 1 chr1D.!!$F3 565
4 TraesCS1B01G472600 chr1D 489105433 489107717 2284 False 533.7400 1334 90.171000 1113 3468 5 chr1D.!!$F4 2355
5 TraesCS1B01G472600 chr1D 488775964 488779641 3677 True 500.9400 1485 93.494600 1707 3643 5 chr1D.!!$R1 1936
6 TraesCS1B01G472600 chr1D 490104551 490105973 1422 False 294.3400 758 88.081800 1126 3035 5 chr1D.!!$F5 1909
7 TraesCS1B01G472600 chr2D 32631787 32632858 1071 False 1413.0000 1413 90.436000 1 1076 1 chr2D.!!$F1 1075
8 TraesCS1B01G472600 chr3D 174082359 174083464 1105 True 1301.0000 1301 88.011000 1 1113 1 chr3D.!!$R1 1112
9 TraesCS1B01G472600 chr5B 33256735 33257315 580 False 382.0000 392 90.823500 308 934 2 chr5B.!!$F1 626

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
726 731 0.387565 GCAAGGCGAGTTTTTGGGAA 59.612 50.000 0.00 0.00 0.00 3.97 F
1023 1028 1.211457 CACTTTCCTCAGATCAGGGGG 59.789 57.143 3.86 0.16 33.81 5.40 F
1713 2470 1.001764 CCTGCTGGCCTGTGAATGA 60.002 57.895 11.69 0.00 0.00 2.57 F
2398 4821 0.035056 GGGTGGTCTGCTGTGCTTAT 60.035 55.000 0.00 0.00 0.00 1.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1629 2374 0.381801 CAAGGCGCGAAAATATGGCT 59.618 50.000 12.10 0.0 39.09 4.75 R
2364 4779 1.212935 CCACCCTTCCAATGTAGGAGG 59.787 57.143 0.83 0.0 39.25 4.30 R
2750 5316 1.539929 CCTGATGGATCTCAGCCGAAC 60.540 57.143 6.47 0.0 41.12 3.95 R
3979 6685 0.034059 CCGAGGGTGGCTATGATCAC 59.966 60.000 0.00 0.0 0.00 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
165 166 4.600692 ACCAGCAAAAATAAGGGTGTTC 57.399 40.909 0.00 0.00 0.00 3.18
250 252 3.386726 ACTAGTTGTTCCTGCTGTGTGTA 59.613 43.478 0.00 0.00 0.00 2.90
354 356 9.246670 ACCTTCTAGATCAGATGATAGAGAATG 57.753 37.037 14.57 14.17 36.04 2.67
408 410 3.057969 TGCTGGATCGTTTGTCTCATT 57.942 42.857 0.00 0.00 0.00 2.57
440 445 3.897505 TGAGGATGAGAGTGACACTTTGA 59.102 43.478 10.01 0.00 0.00 2.69
517 522 7.774157 TCCTCTAAGTACTCATCTGTTCGTTAT 59.226 37.037 0.00 0.00 0.00 1.89
584 589 6.893583 ACATTATACTCCTGCAAGAGATGTT 58.106 36.000 19.22 0.00 37.33 2.71
590 595 1.542492 CTGCAAGAGATGTTGGGCTT 58.458 50.000 0.00 0.00 34.07 4.35
605 610 4.046286 TGGGCTTAATCCAACAGTGAAT 57.954 40.909 0.00 0.00 0.00 2.57
661 666 6.560253 AATTAATATAGAGGCGGCAGTTTG 57.440 37.500 13.08 0.00 0.00 2.93
726 731 0.387565 GCAAGGCGAGTTTTTGGGAA 59.612 50.000 0.00 0.00 0.00 3.97
736 741 5.457799 GCGAGTTTTTGGGAACTTTAGTTTC 59.542 40.000 0.00 0.00 39.84 2.78
771 776 5.069251 GGTCTTTCGGATCCATCTTCTCTTA 59.931 44.000 13.41 0.00 0.00 2.10
791 796 4.606071 GCAGTGGCTTGTCGAGAT 57.394 55.556 0.00 0.00 36.96 2.75
847 852 4.219070 GCAGCTTCATATTGCATGGGATTA 59.781 41.667 0.00 0.00 37.75 1.75
857 862 6.645790 ATTGCATGGGATTACAAGAATCTC 57.354 37.500 0.00 0.00 0.00 2.75
880 885 8.603181 TCTCATTAAACACATACACGAATCATG 58.397 33.333 0.00 0.00 0.00 3.07
884 889 4.736126 ACACATACACGAATCATGAGGA 57.264 40.909 0.09 0.00 0.00 3.71
907 912 3.389329 GGTGTCTATGGTGGAGTGATCAT 59.611 47.826 0.00 0.00 0.00 2.45
1012 1017 3.828875 AGCTAGGTATGCACTTTCCTC 57.171 47.619 0.00 0.00 0.00 3.71
1023 1028 1.211457 CACTTTCCTCAGATCAGGGGG 59.789 57.143 3.86 0.16 33.81 5.40
1076 1081 8.710835 ATTCGGTTGTTTTATCTGTTTTTGTT 57.289 26.923 0.00 0.00 0.00 2.83
1148 1884 5.584649 CGTGGAGCCATTATCTTGTTTTCTA 59.415 40.000 0.00 0.00 0.00 2.10
1149 1885 6.456988 CGTGGAGCCATTATCTTGTTTTCTAC 60.457 42.308 0.00 0.00 0.00 2.59
1160 1896 6.749036 TCTTGTTTTCTACTTTCCTCTCCT 57.251 37.500 0.00 0.00 0.00 3.69
1161 1899 6.760291 TCTTGTTTTCTACTTTCCTCTCCTC 58.240 40.000 0.00 0.00 0.00 3.71
1162 1900 6.555360 TCTTGTTTTCTACTTTCCTCTCCTCT 59.445 38.462 0.00 0.00 0.00 3.69
1163 1901 6.347859 TGTTTTCTACTTTCCTCTCCTCTC 57.652 41.667 0.00 0.00 0.00 3.20
1587 2332 2.186903 CAATCCCTCCACGTCCGG 59.813 66.667 0.00 0.00 0.00 5.14
1590 2335 2.800159 AATCCCTCCACGTCCGGACT 62.800 60.000 30.92 16.03 0.00 3.85
1592 2337 2.361357 CCTCCACGTCCGGACTCT 60.361 66.667 30.92 14.12 0.00 3.24
1643 2388 2.159707 CCCGATTAGCCATATTTTCGCG 60.160 50.000 0.00 0.00 0.00 5.87
1713 2470 1.001764 CCTGCTGGCCTGTGAATGA 60.002 57.895 11.69 0.00 0.00 2.57
1723 2480 1.148310 CTGTGAATGACGGTGACACC 58.852 55.000 15.13 15.13 34.05 4.16
1786 2548 2.715749 TGGACCAATATGAGCACCTG 57.284 50.000 0.00 0.00 0.00 4.00
1787 2549 1.312815 GGACCAATATGAGCACCTGC 58.687 55.000 0.00 0.00 42.49 4.85
1807 2569 2.225255 GCTCTCTTTTGCTGTTCAGGAC 59.775 50.000 1.97 0.00 0.00 3.85
1809 2571 2.158957 TCTCTTTTGCTGTTCAGGACGT 60.159 45.455 0.00 0.00 0.00 4.34
1817 2579 2.667137 CTGTTCAGGACGTTCTCTCAC 58.333 52.381 0.00 0.00 0.00 3.51
1837 2599 1.753073 CTCCAGCAATTCATGGAACCC 59.247 52.381 9.00 0.00 44.82 4.11
1944 2722 2.826738 GCTCGAGCCTCGGAGTCT 60.827 66.667 27.22 0.00 40.88 3.24
1954 2732 2.034812 GCCTCGGAGTCTTGATTATCGT 59.965 50.000 4.02 0.00 0.00 3.73
1959 2737 6.242508 TCGGAGTCTTGATTATCGTATCTG 57.757 41.667 0.00 0.00 0.00 2.90
2057 2839 5.489792 TCTGACTAGCATATGGAAATCCC 57.510 43.478 4.56 0.00 34.29 3.85
2117 4464 4.118410 GCTCATGGATAGACTGAACACTG 58.882 47.826 0.00 0.00 0.00 3.66
2118 4465 4.142071 GCTCATGGATAGACTGAACACTGA 60.142 45.833 0.00 0.00 0.00 3.41
2119 4466 5.625426 GCTCATGGATAGACTGAACACTGAA 60.625 44.000 0.00 0.00 0.00 3.02
2120 4467 5.724328 TCATGGATAGACTGAACACTGAAC 58.276 41.667 0.00 0.00 0.00 3.18
2122 4469 4.883083 TGGATAGACTGAACACTGAACAC 58.117 43.478 0.00 0.00 0.00 3.32
2123 4470 4.588951 TGGATAGACTGAACACTGAACACT 59.411 41.667 0.00 0.00 0.00 3.55
2124 4471 5.773176 TGGATAGACTGAACACTGAACACTA 59.227 40.000 0.00 0.00 0.00 2.74
2126 4473 4.592485 AGACTGAACACTGAACACTAGG 57.408 45.455 0.00 0.00 0.00 3.02
2127 4474 4.215908 AGACTGAACACTGAACACTAGGA 58.784 43.478 0.00 0.00 0.00 2.94
2128 4475 4.649674 AGACTGAACACTGAACACTAGGAA 59.350 41.667 0.00 0.00 0.00 3.36
2129 4476 5.305644 AGACTGAACACTGAACACTAGGAAT 59.694 40.000 0.00 0.00 0.00 3.01
2131 4478 7.179338 AGACTGAACACTGAACACTAGGAATAT 59.821 37.037 0.00 0.00 0.00 1.28
2132 4479 7.680730 ACTGAACACTGAACACTAGGAATATT 58.319 34.615 0.00 0.00 0.00 1.28
2181 4574 4.496341 CCATACACCTATTCTTTGCTTGCG 60.496 45.833 0.00 0.00 0.00 4.85
2202 4595 1.068333 CATTCGGTGCTTCTTGTTGGG 60.068 52.381 0.00 0.00 0.00 4.12
2234 4632 8.751215 TCCATATTTATATTACCTGGGACACT 57.249 34.615 0.00 0.00 0.00 3.55
2337 4752 2.883386 GCCTGGAATATCTGGAAGCAAG 59.117 50.000 0.00 0.00 0.00 4.01
2364 4779 4.218417 ACTGGAAATACTTTGATGGTGTGC 59.782 41.667 0.00 0.00 0.00 4.57
2385 4808 1.916181 CTCCTACATTGGAAGGGTGGT 59.084 52.381 7.30 0.00 35.43 4.16
2398 4821 0.035056 GGGTGGTCTGCTGTGCTTAT 60.035 55.000 0.00 0.00 0.00 1.73
2409 4832 4.199310 TGCTGTGCTTATGGAGGATTTAC 58.801 43.478 0.00 0.00 0.00 2.01
2419 4842 8.470002 GCTTATGGAGGATTTACAAATCAACTT 58.530 33.333 14.80 6.59 45.10 2.66
2466 4889 4.993029 ATCTGACTTCCTAACCTCTTCG 57.007 45.455 0.00 0.00 0.00 3.79
2589 5138 6.568844 GCATTGTTTGCCAATTGATTGATTGT 60.569 34.615 7.12 0.00 46.15 2.71
2590 5139 5.926214 TGTTTGCCAATTGATTGATTGTG 57.074 34.783 7.12 0.00 40.14 3.33
2668 5221 7.094334 TGCTCTACTTCTGAGATAAACTTCGAA 60.094 37.037 0.00 0.00 33.68 3.71
2766 5332 0.387202 CTCGTTCGGCTGAGATCCAT 59.613 55.000 0.00 0.00 34.04 3.41
2958 5524 3.180507 ACAAGGGCTCTGATCTCTCTTT 58.819 45.455 0.00 0.00 0.00 2.52
3302 5885 3.286353 TGTGATGCTTGGTGAAAAGTGA 58.714 40.909 0.00 0.00 0.00 3.41
3495 6078 2.271821 AAACGTGCTTGTGTGGAAAC 57.728 45.000 0.00 0.00 0.00 2.78
3533 6141 4.499183 GCTACTCTGCTGTGTTCTGTAAT 58.501 43.478 3.58 0.00 0.00 1.89
3714 6420 7.038799 ACAGCCATCAAAAGGAATCATTAGTTT 60.039 33.333 0.00 0.00 0.00 2.66
3715 6421 7.820872 CAGCCATCAAAAGGAATCATTAGTTTT 59.179 33.333 0.00 0.00 0.00 2.43
3716 6422 8.377799 AGCCATCAAAAGGAATCATTAGTTTTT 58.622 29.630 0.00 0.00 0.00 1.94
3738 6444 2.748461 TTTTGGAACGAACGCTCAAG 57.252 45.000 0.00 0.00 0.00 3.02
3739 6445 1.942677 TTTGGAACGAACGCTCAAGA 58.057 45.000 0.00 0.00 0.00 3.02
3740 6446 1.942677 TTGGAACGAACGCTCAAGAA 58.057 45.000 0.00 0.00 0.00 2.52
3741 6447 1.497991 TGGAACGAACGCTCAAGAAG 58.502 50.000 0.00 0.00 0.00 2.85
3742 6448 1.067974 TGGAACGAACGCTCAAGAAGA 59.932 47.619 0.00 0.00 0.00 2.87
3750 6456 2.985456 CTCAAGAAGAGCCCGGCT 59.015 61.111 13.16 13.16 43.88 5.52
3751 6457 1.298014 CTCAAGAAGAGCCCGGCTT 59.702 57.895 14.70 0.00 39.88 4.35
3752 6458 0.322008 CTCAAGAAGAGCCCGGCTTT 60.322 55.000 14.70 4.65 39.88 3.51
3753 6459 0.606401 TCAAGAAGAGCCCGGCTTTG 60.606 55.000 14.70 13.91 39.88 2.77
3754 6460 0.606401 CAAGAAGAGCCCGGCTTTGA 60.606 55.000 14.70 0.00 39.88 2.69
3755 6461 0.110486 AAGAAGAGCCCGGCTTTGAA 59.890 50.000 14.70 0.00 39.88 2.69
3756 6462 0.329596 AGAAGAGCCCGGCTTTGAAT 59.670 50.000 14.70 0.00 39.88 2.57
3757 6463 1.177401 GAAGAGCCCGGCTTTGAATT 58.823 50.000 14.70 4.04 39.88 2.17
3758 6464 2.026262 AGAAGAGCCCGGCTTTGAATTA 60.026 45.455 14.70 0.00 39.88 1.40
3759 6465 2.507407 AGAGCCCGGCTTTGAATTAA 57.493 45.000 14.70 0.00 39.88 1.40
3760 6466 2.092323 AGAGCCCGGCTTTGAATTAAC 58.908 47.619 14.70 0.00 39.88 2.01
3761 6467 1.816224 GAGCCCGGCTTTGAATTAACA 59.184 47.619 14.70 0.00 39.88 2.41
3762 6468 2.230266 GAGCCCGGCTTTGAATTAACAA 59.770 45.455 14.70 0.00 39.88 2.83
3763 6469 2.630580 AGCCCGGCTTTGAATTAACAAA 59.369 40.909 5.94 0.00 33.89 2.83
3773 6479 7.120789 CTTTGAATTAACAAAGCCATCAACC 57.879 36.000 6.67 0.00 46.05 3.77
3774 6480 4.804108 TGAATTAACAAAGCCATCAACCG 58.196 39.130 0.00 0.00 0.00 4.44
3775 6481 3.866883 ATTAACAAAGCCATCAACCGG 57.133 42.857 0.00 0.00 0.00 5.28
3781 6487 4.424711 GCCATCAACCGGCCAGGA 62.425 66.667 18.74 3.02 44.22 3.86
3782 6488 2.597340 CCATCAACCGGCCAGGAT 59.403 61.111 18.74 5.67 45.00 3.24
3783 6489 1.076777 CCATCAACCGGCCAGGATT 60.077 57.895 18.74 7.79 45.00 3.01
3784 6490 0.182537 CCATCAACCGGCCAGGATTA 59.817 55.000 18.74 1.01 45.00 1.75
3785 6491 1.308998 CATCAACCGGCCAGGATTAC 58.691 55.000 18.74 0.00 45.00 1.89
3786 6492 0.916086 ATCAACCGGCCAGGATTACA 59.084 50.000 18.74 0.75 45.00 2.41
3787 6493 0.693622 TCAACCGGCCAGGATTACAA 59.306 50.000 18.74 0.00 45.00 2.41
3788 6494 1.094785 CAACCGGCCAGGATTACAAG 58.905 55.000 18.74 0.00 45.00 3.16
3789 6495 0.034477 AACCGGCCAGGATTACAAGG 60.034 55.000 18.74 2.64 45.00 3.61
3790 6496 0.912487 ACCGGCCAGGATTACAAGGA 60.912 55.000 18.74 0.00 45.00 3.36
3791 6497 0.463833 CCGGCCAGGATTACAAGGAC 60.464 60.000 2.24 0.00 45.00 3.85
3792 6498 0.251916 CGGCCAGGATTACAAGGACA 59.748 55.000 2.24 0.00 0.00 4.02
3793 6499 1.339631 CGGCCAGGATTACAAGGACAA 60.340 52.381 2.24 0.00 0.00 3.18
3794 6500 2.802719 GGCCAGGATTACAAGGACAAA 58.197 47.619 0.00 0.00 0.00 2.83
3795 6501 2.492088 GGCCAGGATTACAAGGACAAAC 59.508 50.000 0.00 0.00 0.00 2.93
3796 6502 3.153919 GCCAGGATTACAAGGACAAACA 58.846 45.455 0.00 0.00 0.00 2.83
3797 6503 3.057526 GCCAGGATTACAAGGACAAACAC 60.058 47.826 0.00 0.00 0.00 3.32
3798 6504 4.398319 CCAGGATTACAAGGACAAACACT 58.602 43.478 0.00 0.00 0.00 3.55
3799 6505 4.827284 CCAGGATTACAAGGACAAACACTT 59.173 41.667 0.00 0.00 0.00 3.16
3800 6506 6.001460 CCAGGATTACAAGGACAAACACTTA 58.999 40.000 0.00 0.00 0.00 2.24
3801 6507 6.072673 CCAGGATTACAAGGACAAACACTTAC 60.073 42.308 0.00 0.00 0.00 2.34
3802 6508 6.485313 CAGGATTACAAGGACAAACACTTACA 59.515 38.462 0.00 0.00 0.00 2.41
3803 6509 7.012894 CAGGATTACAAGGACAAACACTTACAA 59.987 37.037 0.00 0.00 0.00 2.41
3804 6510 7.724061 AGGATTACAAGGACAAACACTTACAAT 59.276 33.333 0.00 0.00 0.00 2.71
3805 6511 7.807907 GGATTACAAGGACAAACACTTACAATG 59.192 37.037 0.00 0.00 0.00 2.82
3806 6512 7.867305 TTACAAGGACAAACACTTACAATGA 57.133 32.000 0.00 0.00 0.00 2.57
3807 6513 6.767524 ACAAGGACAAACACTTACAATGAA 57.232 33.333 0.00 0.00 0.00 2.57
3808 6514 7.164230 ACAAGGACAAACACTTACAATGAAA 57.836 32.000 0.00 0.00 0.00 2.69
3809 6515 7.607250 ACAAGGACAAACACTTACAATGAAAA 58.393 30.769 0.00 0.00 0.00 2.29
3810 6516 7.759433 ACAAGGACAAACACTTACAATGAAAAG 59.241 33.333 0.00 0.00 0.00 2.27
3811 6517 7.404671 AGGACAAACACTTACAATGAAAAGT 57.595 32.000 0.00 0.00 36.38 2.66
3812 6518 8.514330 AGGACAAACACTTACAATGAAAAGTA 57.486 30.769 5.68 0.00 34.23 2.24
3813 6519 8.962679 AGGACAAACACTTACAATGAAAAGTAA 58.037 29.630 5.68 0.00 34.23 2.24
3814 6520 9.575783 GGACAAACACTTACAATGAAAAGTAAA 57.424 29.630 5.68 0.00 34.23 2.01
3816 6522 9.581099 ACAAACACTTACAATGAAAAGTAAAGG 57.419 29.630 5.68 0.00 34.23 3.11
3817 6523 9.796120 CAAACACTTACAATGAAAAGTAAAGGA 57.204 29.630 5.68 0.00 34.23 3.36
3835 6541 4.744316 AAAAACCGAGCGACGAGT 57.256 50.000 0.00 2.25 45.77 4.18
3836 6542 3.871775 AAAAACCGAGCGACGAGTA 57.128 47.368 0.00 0.00 45.77 2.59
3837 6543 1.412387 AAAAACCGAGCGACGAGTAC 58.588 50.000 0.00 0.00 45.77 2.73
3838 6544 0.311790 AAAACCGAGCGACGAGTACA 59.688 50.000 0.00 0.00 45.77 2.90
3839 6545 0.311790 AAACCGAGCGACGAGTACAA 59.688 50.000 0.00 0.00 45.77 2.41
3840 6546 0.109873 AACCGAGCGACGAGTACAAG 60.110 55.000 0.00 0.00 45.77 3.16
3841 6547 1.226323 CCGAGCGACGAGTACAAGG 60.226 63.158 0.00 0.00 45.77 3.61
3842 6548 1.642037 CCGAGCGACGAGTACAAGGA 61.642 60.000 0.00 0.00 45.77 3.36
3843 6549 0.167470 CGAGCGACGAGTACAAGGAA 59.833 55.000 0.00 0.00 45.77 3.36
3844 6550 1.615502 GAGCGACGAGTACAAGGAAC 58.384 55.000 0.00 0.00 0.00 3.62
3845 6551 4.316185 CGAGCGACGAGTACAAGGAACT 62.316 54.545 0.00 0.00 45.77 3.01
3846 6552 1.199558 AGCGACGAGTACAAGGAACTC 59.800 52.381 0.00 0.00 38.49 3.01
3847 6553 1.068748 GCGACGAGTACAAGGAACTCA 60.069 52.381 0.00 0.00 42.91 3.41
3848 6554 2.606308 GCGACGAGTACAAGGAACTCAA 60.606 50.000 0.00 0.00 42.91 3.02
3849 6555 3.235195 CGACGAGTACAAGGAACTCAAG 58.765 50.000 0.00 0.00 42.91 3.02
3850 6556 2.987821 GACGAGTACAAGGAACTCAAGC 59.012 50.000 0.00 0.00 42.91 4.01
3851 6557 2.364324 ACGAGTACAAGGAACTCAAGCA 59.636 45.455 0.00 0.00 42.91 3.91
3852 6558 3.181469 ACGAGTACAAGGAACTCAAGCAA 60.181 43.478 0.00 0.00 42.91 3.91
3853 6559 3.807622 CGAGTACAAGGAACTCAAGCAAA 59.192 43.478 0.00 0.00 42.91 3.68
3854 6560 4.272504 CGAGTACAAGGAACTCAAGCAAAA 59.727 41.667 0.00 0.00 42.91 2.44
3855 6561 5.500645 AGTACAAGGAACTCAAGCAAAAC 57.499 39.130 0.00 0.00 38.49 2.43
3856 6562 4.947388 AGTACAAGGAACTCAAGCAAAACA 59.053 37.500 0.00 0.00 38.49 2.83
3857 6563 4.799564 ACAAGGAACTCAAGCAAAACAA 57.200 36.364 0.00 0.00 38.49 2.83
3858 6564 4.494484 ACAAGGAACTCAAGCAAAACAAC 58.506 39.130 0.00 0.00 38.49 3.32
3859 6565 4.220602 ACAAGGAACTCAAGCAAAACAACT 59.779 37.500 0.00 0.00 38.49 3.16
3860 6566 4.639135 AGGAACTCAAGCAAAACAACTC 57.361 40.909 0.00 0.00 0.00 3.01
3861 6567 4.016444 AGGAACTCAAGCAAAACAACTCA 58.984 39.130 0.00 0.00 0.00 3.41
3862 6568 4.462483 AGGAACTCAAGCAAAACAACTCAA 59.538 37.500 0.00 0.00 0.00 3.02
3863 6569 4.800471 GGAACTCAAGCAAAACAACTCAAG 59.200 41.667 0.00 0.00 0.00 3.02
3864 6570 4.376340 ACTCAAGCAAAACAACTCAAGG 57.624 40.909 0.00 0.00 0.00 3.61
3865 6571 3.118542 CTCAAGCAAAACAACTCAAGGC 58.881 45.455 0.00 0.00 0.00 4.35
3866 6572 2.495270 TCAAGCAAAACAACTCAAGGCA 59.505 40.909 0.00 0.00 0.00 4.75
3867 6573 2.861935 CAAGCAAAACAACTCAAGGCAG 59.138 45.455 0.00 0.00 0.00 4.85
3868 6574 1.202452 AGCAAAACAACTCAAGGCAGC 60.202 47.619 0.00 0.00 0.00 5.25
3869 6575 1.471327 GCAAAACAACTCAAGGCAGCA 60.471 47.619 0.00 0.00 0.00 4.41
3870 6576 2.466846 CAAAACAACTCAAGGCAGCAG 58.533 47.619 0.00 0.00 0.00 4.24
3871 6577 0.386838 AAACAACTCAAGGCAGCAGC 59.613 50.000 0.00 0.00 41.10 5.25
3872 6578 0.752743 AACAACTCAAGGCAGCAGCA 60.753 50.000 2.65 0.00 44.61 4.41
3873 6579 1.170919 ACAACTCAAGGCAGCAGCAG 61.171 55.000 2.65 0.00 44.61 4.24
3874 6580 0.887836 CAACTCAAGGCAGCAGCAGA 60.888 55.000 2.65 0.00 44.61 4.26
3875 6581 0.605860 AACTCAAGGCAGCAGCAGAG 60.606 55.000 13.30 13.30 44.61 3.35
3876 6582 1.003597 CTCAAGGCAGCAGCAGAGT 60.004 57.895 2.65 0.00 44.61 3.24
3877 6583 1.299562 CTCAAGGCAGCAGCAGAGTG 61.300 60.000 2.65 0.00 44.61 3.51
3878 6584 1.302271 CAAGGCAGCAGCAGAGTGA 60.302 57.895 2.65 0.00 44.61 3.41
3879 6585 1.003597 AAGGCAGCAGCAGAGTGAG 60.004 57.895 2.65 0.00 44.61 3.51
3880 6586 3.126225 GGCAGCAGCAGAGTGAGC 61.126 66.667 2.65 0.00 44.61 4.26
3881 6587 3.126225 GCAGCAGCAGAGTGAGCC 61.126 66.667 0.00 0.00 41.58 4.70
3882 6588 2.346365 CAGCAGCAGAGTGAGCCA 59.654 61.111 0.00 0.00 0.00 4.75
3883 6589 1.302271 CAGCAGCAGAGTGAGCCAA 60.302 57.895 0.00 0.00 0.00 4.52
3884 6590 0.677098 CAGCAGCAGAGTGAGCCAAT 60.677 55.000 0.00 0.00 0.00 3.16
3885 6591 0.677098 AGCAGCAGAGTGAGCCAATG 60.677 55.000 0.00 0.00 0.00 2.82
3886 6592 1.801332 CAGCAGAGTGAGCCAATGC 59.199 57.895 0.00 0.00 37.15 3.56
3887 6593 0.958876 CAGCAGAGTGAGCCAATGCA 60.959 55.000 0.00 0.00 41.13 3.96
3888 6594 0.034380 AGCAGAGTGAGCCAATGCAT 60.034 50.000 0.00 0.00 41.13 3.96
3889 6595 0.381089 GCAGAGTGAGCCAATGCATC 59.619 55.000 0.00 0.00 41.13 3.91
3890 6596 1.746470 CAGAGTGAGCCAATGCATCA 58.254 50.000 0.00 0.00 41.13 3.07
3891 6597 1.400846 CAGAGTGAGCCAATGCATCAC 59.599 52.381 8.97 8.97 41.71 3.06
3892 6598 0.737219 GAGTGAGCCAATGCATCACC 59.263 55.000 12.60 2.91 42.03 4.02
3893 6599 0.038599 AGTGAGCCAATGCATCACCA 59.961 50.000 12.60 0.00 42.03 4.17
3894 6600 0.171903 GTGAGCCAATGCATCACCAC 59.828 55.000 0.00 0.91 38.55 4.16
3895 6601 1.307355 TGAGCCAATGCATCACCACG 61.307 55.000 0.00 0.00 41.13 4.94
3896 6602 2.202650 GCCAATGCATCACCACGC 60.203 61.111 0.00 0.00 37.47 5.34
3897 6603 2.703798 GCCAATGCATCACCACGCT 61.704 57.895 0.00 0.00 37.47 5.07
3898 6604 1.138036 CCAATGCATCACCACGCTG 59.862 57.895 0.00 0.00 0.00 5.18
3899 6605 1.515519 CAATGCATCACCACGCTGC 60.516 57.895 0.00 0.00 36.45 5.25
3900 6606 1.676635 AATGCATCACCACGCTGCT 60.677 52.632 0.00 0.00 36.84 4.24
3901 6607 1.929806 AATGCATCACCACGCTGCTG 61.930 55.000 0.00 0.00 36.84 4.41
3902 6608 4.471726 GCATCACCACGCTGCTGC 62.472 66.667 5.34 5.34 33.15 5.25
3903 6609 2.745100 CATCACCACGCTGCTGCT 60.745 61.111 14.03 0.00 36.97 4.24
3904 6610 1.448365 CATCACCACGCTGCTGCTA 60.448 57.895 14.03 0.00 36.97 3.49
3905 6611 1.020861 CATCACCACGCTGCTGCTAA 61.021 55.000 14.03 0.00 36.97 3.09
3906 6612 1.021390 ATCACCACGCTGCTGCTAAC 61.021 55.000 14.03 0.00 36.97 2.34
3907 6613 1.960763 CACCACGCTGCTGCTAACA 60.961 57.895 14.03 0.00 36.97 2.41
3908 6614 1.961277 ACCACGCTGCTGCTAACAC 60.961 57.895 14.03 0.00 36.97 3.32
3909 6615 2.680913 CCACGCTGCTGCTAACACC 61.681 63.158 14.03 0.00 36.97 4.16
3910 6616 2.358737 ACGCTGCTGCTAACACCC 60.359 61.111 14.03 0.00 36.97 4.61
3911 6617 2.358615 CGCTGCTGCTAACACCCA 60.359 61.111 14.03 0.00 36.97 4.51
3912 6618 1.965930 CGCTGCTGCTAACACCCAA 60.966 57.895 14.03 0.00 36.97 4.12
3913 6619 1.581447 GCTGCTGCTAACACCCAAC 59.419 57.895 8.53 0.00 36.03 3.77
3914 6620 0.890996 GCTGCTGCTAACACCCAACT 60.891 55.000 8.53 0.00 36.03 3.16
3915 6621 0.877071 CTGCTGCTAACACCCAACTG 59.123 55.000 0.00 0.00 0.00 3.16
3916 6622 0.537143 TGCTGCTAACACCCAACTGG 60.537 55.000 0.00 0.00 41.37 4.00
3917 6623 0.250727 GCTGCTAACACCCAACTGGA 60.251 55.000 0.00 0.00 37.39 3.86
3918 6624 1.523758 CTGCTAACACCCAACTGGAC 58.476 55.000 0.00 0.00 37.39 4.02
3919 6625 0.250124 TGCTAACACCCAACTGGACG 60.250 55.000 0.00 0.00 37.39 4.79
3920 6626 0.034337 GCTAACACCCAACTGGACGA 59.966 55.000 0.00 0.00 37.39 4.20
3921 6627 1.792006 CTAACACCCAACTGGACGAC 58.208 55.000 0.00 0.00 37.39 4.34
3922 6628 0.393820 TAACACCCAACTGGACGACC 59.606 55.000 0.00 0.00 37.39 4.79
3923 6629 1.342672 AACACCCAACTGGACGACCT 61.343 55.000 5.33 0.00 37.39 3.85
3924 6630 0.470456 ACACCCAACTGGACGACCTA 60.470 55.000 5.33 0.00 37.39 3.08
3925 6631 0.037605 CACCCAACTGGACGACCTAC 60.038 60.000 5.33 0.00 37.39 3.18
3926 6632 0.470456 ACCCAACTGGACGACCTACA 60.470 55.000 5.33 0.00 37.39 2.74
3927 6633 0.037605 CCCAACTGGACGACCTACAC 60.038 60.000 5.33 0.00 37.39 2.90
3928 6634 0.037605 CCAACTGGACGACCTACACC 60.038 60.000 5.33 0.00 37.39 4.16
3929 6635 0.677288 CAACTGGACGACCTACACCA 59.323 55.000 5.33 0.00 37.04 4.17
3930 6636 1.069513 CAACTGGACGACCTACACCAA 59.930 52.381 5.33 0.00 37.04 3.67
3931 6637 0.677842 ACTGGACGACCTACACCAAC 59.322 55.000 5.33 0.00 37.04 3.77
3932 6638 0.677288 CTGGACGACCTACACCAACA 59.323 55.000 5.33 0.00 37.04 3.33
3933 6639 0.677288 TGGACGACCTACACCAACAG 59.323 55.000 5.33 0.00 37.04 3.16
3934 6640 0.963962 GGACGACCTACACCAACAGA 59.036 55.000 0.00 0.00 0.00 3.41
3935 6641 1.342174 GGACGACCTACACCAACAGAA 59.658 52.381 0.00 0.00 0.00 3.02
3936 6642 2.401351 GACGACCTACACCAACAGAAC 58.599 52.381 0.00 0.00 0.00 3.01
3937 6643 1.758280 ACGACCTACACCAACAGAACA 59.242 47.619 0.00 0.00 0.00 3.18
3938 6644 2.168936 ACGACCTACACCAACAGAACAA 59.831 45.455 0.00 0.00 0.00 2.83
3939 6645 3.199677 CGACCTACACCAACAGAACAAA 58.800 45.455 0.00 0.00 0.00 2.83
3940 6646 3.623960 CGACCTACACCAACAGAACAAAA 59.376 43.478 0.00 0.00 0.00 2.44
3941 6647 4.495184 CGACCTACACCAACAGAACAAAAC 60.495 45.833 0.00 0.00 0.00 2.43
3942 6648 4.595986 ACCTACACCAACAGAACAAAACT 58.404 39.130 0.00 0.00 0.00 2.66
3943 6649 5.747342 ACCTACACCAACAGAACAAAACTA 58.253 37.500 0.00 0.00 0.00 2.24
3944 6650 5.820947 ACCTACACCAACAGAACAAAACTAG 59.179 40.000 0.00 0.00 0.00 2.57
3945 6651 5.238650 CCTACACCAACAGAACAAAACTAGG 59.761 44.000 0.00 0.00 0.00 3.02
3946 6652 3.951680 ACACCAACAGAACAAAACTAGGG 59.048 43.478 0.00 0.00 0.00 3.53
3947 6653 4.204012 CACCAACAGAACAAAACTAGGGA 58.796 43.478 0.00 0.00 0.00 4.20
3948 6654 4.036380 CACCAACAGAACAAAACTAGGGAC 59.964 45.833 0.00 0.00 0.00 4.46
3949 6655 4.079958 ACCAACAGAACAAAACTAGGGACT 60.080 41.667 0.00 0.00 46.37 3.85
3950 6656 4.887655 CCAACAGAACAAAACTAGGGACTT 59.112 41.667 0.00 0.00 41.75 3.01
3951 6657 5.221048 CCAACAGAACAAAACTAGGGACTTG 60.221 44.000 0.00 0.00 41.75 3.16
3952 6658 4.461198 ACAGAACAAAACTAGGGACTTGG 58.539 43.478 0.00 0.00 41.75 3.61
3953 6659 3.821033 CAGAACAAAACTAGGGACTTGGG 59.179 47.826 0.00 0.00 41.75 4.12
3954 6660 3.720002 AGAACAAAACTAGGGACTTGGGA 59.280 43.478 0.00 0.00 41.75 4.37
3955 6661 3.790089 ACAAAACTAGGGACTTGGGAG 57.210 47.619 0.00 0.00 41.75 4.30
3956 6662 2.375509 ACAAAACTAGGGACTTGGGAGG 59.624 50.000 0.00 0.00 41.75 4.30
3957 6663 2.642807 CAAAACTAGGGACTTGGGAGGA 59.357 50.000 0.00 0.00 41.75 3.71
3958 6664 2.735259 AACTAGGGACTTGGGAGGAA 57.265 50.000 0.00 0.00 41.75 3.36
3959 6665 2.972153 ACTAGGGACTTGGGAGGAAT 57.028 50.000 0.00 0.00 41.75 3.01
3960 6666 2.482494 ACTAGGGACTTGGGAGGAATG 58.518 52.381 0.00 0.00 41.75 2.67
3961 6667 1.141858 CTAGGGACTTGGGAGGAATGC 59.858 57.143 0.00 0.00 41.75 3.56
3962 6668 0.846427 AGGGACTTGGGAGGAATGCA 60.846 55.000 0.00 0.00 27.25 3.96
3963 6669 0.681243 GGGACTTGGGAGGAATGCAC 60.681 60.000 0.00 0.00 0.00 4.57
3964 6670 0.681243 GGACTTGGGAGGAATGCACC 60.681 60.000 0.00 0.00 0.00 5.01
3965 6671 0.038166 GACTTGGGAGGAATGCACCA 59.962 55.000 0.00 0.00 0.00 4.17
3966 6672 0.251341 ACTTGGGAGGAATGCACCAC 60.251 55.000 0.00 0.00 31.65 4.16
3967 6673 0.967380 CTTGGGAGGAATGCACCACC 60.967 60.000 1.64 1.64 39.41 4.61
3968 6674 2.438434 GGGAGGAATGCACCACCG 60.438 66.667 4.14 0.00 40.69 4.94
3969 6675 3.134127 GGAGGAATGCACCACCGC 61.134 66.667 0.00 0.00 31.72 5.68
3970 6676 3.499737 GAGGAATGCACCACCGCG 61.500 66.667 0.00 0.00 33.35 6.46
3973 6679 4.036804 GAATGCACCACCGCGCAA 62.037 61.111 8.75 0.00 42.37 4.85
3974 6680 3.951655 GAATGCACCACCGCGCAAG 62.952 63.158 8.75 0.00 42.37 4.01
3988 6694 2.918656 CGCAAGCTTCGTGATCATAG 57.081 50.000 0.00 0.00 0.00 2.23
3989 6695 1.070975 CGCAAGCTTCGTGATCATAGC 60.071 52.381 15.60 15.60 0.00 2.97
3990 6696 1.262683 GCAAGCTTCGTGATCATAGCC 59.737 52.381 18.26 5.58 34.19 3.93
3991 6697 2.554142 CAAGCTTCGTGATCATAGCCA 58.446 47.619 18.26 0.48 34.19 4.75
3992 6698 2.231215 AGCTTCGTGATCATAGCCAC 57.769 50.000 18.26 0.00 34.19 5.01
3993 6699 1.202580 AGCTTCGTGATCATAGCCACC 60.203 52.381 18.26 0.00 34.19 4.61
3994 6700 1.871080 CTTCGTGATCATAGCCACCC 58.129 55.000 0.00 0.00 0.00 4.61
3995 6701 1.414181 CTTCGTGATCATAGCCACCCT 59.586 52.381 0.00 0.00 0.00 4.34
3996 6702 1.040646 TCGTGATCATAGCCACCCTC 58.959 55.000 0.00 0.00 0.00 4.30
3997 6703 0.319040 CGTGATCATAGCCACCCTCG 60.319 60.000 0.00 0.00 0.00 4.63
3998 6704 0.034059 GTGATCATAGCCACCCTCGG 59.966 60.000 0.00 0.00 0.00 4.63
3999 6705 0.105709 TGATCATAGCCACCCTCGGA 60.106 55.000 0.00 0.00 0.00 4.55
4000 6706 0.605589 GATCATAGCCACCCTCGGAG 59.394 60.000 0.00 0.00 0.00 4.63
4001 6707 1.476007 ATCATAGCCACCCTCGGAGC 61.476 60.000 0.00 0.00 0.00 4.70
4002 6708 2.844839 ATAGCCACCCTCGGAGCC 60.845 66.667 0.00 0.00 0.00 4.70
4003 6709 3.696518 ATAGCCACCCTCGGAGCCA 62.697 63.158 0.00 0.00 0.00 4.75
4009 6715 4.559063 CCCTCGGAGCCAGCCATG 62.559 72.222 0.00 0.00 0.00 3.66
4019 6725 3.080641 CAGCCATGGACCAGACCA 58.919 61.111 18.40 0.00 44.41 4.02
4020 6726 1.377725 CAGCCATGGACCAGACCAC 60.378 63.158 18.40 0.00 43.03 4.16
4021 6727 2.044946 GCCATGGACCAGACCACC 60.045 66.667 18.40 0.00 43.03 4.61
4022 6728 2.905996 GCCATGGACCAGACCACCA 61.906 63.158 18.40 0.00 43.03 4.17
4023 6729 2.001803 CCATGGACCAGACCACCAT 58.998 57.895 5.56 0.00 43.97 3.55
4024 6730 0.107017 CCATGGACCAGACCACCATC 60.107 60.000 5.56 0.00 41.68 3.51
4025 6731 0.914644 CATGGACCAGACCACCATCT 59.085 55.000 0.00 0.00 41.68 2.90
4026 6732 0.914644 ATGGACCAGACCACCATCTG 59.085 55.000 0.00 0.00 44.91 2.90
4027 6733 0.473694 TGGACCAGACCACCATCTGT 60.474 55.000 0.00 0.00 43.99 3.41
4028 6734 0.693049 GGACCAGACCACCATCTGTT 59.307 55.000 2.35 0.00 43.99 3.16
4029 6735 1.906574 GGACCAGACCACCATCTGTTA 59.093 52.381 2.35 0.00 43.99 2.41
4030 6736 2.354805 GGACCAGACCACCATCTGTTAC 60.355 54.545 2.35 0.00 43.99 2.50
4031 6737 2.567615 GACCAGACCACCATCTGTTACT 59.432 50.000 2.35 0.00 43.99 2.24
4032 6738 2.303022 ACCAGACCACCATCTGTTACTG 59.697 50.000 2.35 0.00 43.99 2.74
4033 6739 2.350522 CAGACCACCATCTGTTACTGC 58.649 52.381 0.00 0.00 41.12 4.40
4034 6740 1.279271 AGACCACCATCTGTTACTGCC 59.721 52.381 0.00 0.00 0.00 4.85
4035 6741 1.279271 GACCACCATCTGTTACTGCCT 59.721 52.381 0.00 0.00 0.00 4.75
4036 6742 1.279271 ACCACCATCTGTTACTGCCTC 59.721 52.381 0.00 0.00 0.00 4.70
4037 6743 1.556911 CCACCATCTGTTACTGCCTCT 59.443 52.381 0.00 0.00 0.00 3.69
4038 6744 2.625737 CACCATCTGTTACTGCCTCTG 58.374 52.381 0.00 0.00 0.00 3.35
4039 6745 1.065854 ACCATCTGTTACTGCCTCTGC 60.066 52.381 0.00 0.00 38.26 4.26
4048 6754 4.684134 TGCCTCTGCAAAGGGCCC 62.684 66.667 16.46 16.46 46.66 5.80
4050 6756 3.665971 CCTCTGCAAAGGGCCCCT 61.666 66.667 21.43 0.58 43.89 4.79
4051 6757 2.308722 CCTCTGCAAAGGGCCCCTA 61.309 63.158 21.43 0.00 43.89 3.53
4052 6758 1.077429 CTCTGCAAAGGGCCCCTAC 60.077 63.158 21.43 6.44 43.89 3.18
4053 6759 2.043953 CTGCAAAGGGCCCCTACC 60.044 66.667 21.43 5.56 43.89 3.18
4060 6766 2.369706 GGGCCCCTACCCCTTCAT 60.370 66.667 12.23 0.00 45.00 2.57
4061 6767 2.461739 GGGCCCCTACCCCTTCATC 61.462 68.421 12.23 0.00 45.00 2.92
4062 6768 2.461739 GGCCCCTACCCCTTCATCC 61.462 68.421 0.00 0.00 0.00 3.51
4063 6769 1.386057 GCCCCTACCCCTTCATCCT 60.386 63.158 0.00 0.00 0.00 3.24
4064 6770 1.709994 GCCCCTACCCCTTCATCCTG 61.710 65.000 0.00 0.00 0.00 3.86
4065 6771 1.062488 CCCCTACCCCTTCATCCTGG 61.062 65.000 0.00 0.00 0.00 4.45
4066 6772 1.062488 CCCTACCCCTTCATCCTGGG 61.062 65.000 0.00 0.00 45.34 4.45
4069 6775 2.911143 CCCCTTCATCCTGGGTCG 59.089 66.667 0.00 0.00 41.82 4.79
4070 6776 1.689233 CCCCTTCATCCTGGGTCGA 60.689 63.158 0.00 0.00 41.82 4.20
4071 6777 1.271840 CCCCTTCATCCTGGGTCGAA 61.272 60.000 0.00 0.00 41.82 3.71
4072 6778 0.179000 CCCTTCATCCTGGGTCGAAG 59.821 60.000 10.41 10.41 38.65 3.79
4073 6779 0.179000 CCTTCATCCTGGGTCGAAGG 59.821 60.000 17.85 17.85 46.21 3.46
4077 6783 3.309582 TCCTGGGTCGAAGGATGC 58.690 61.111 0.00 0.00 38.96 3.91
4078 6784 2.190578 CCTGGGTCGAAGGATGCC 59.809 66.667 0.00 0.00 36.91 4.40
4079 6785 2.202932 CTGGGTCGAAGGATGCCG 60.203 66.667 0.00 0.00 0.00 5.69
4080 6786 4.467084 TGGGTCGAAGGATGCCGC 62.467 66.667 0.00 0.00 0.00 6.53
4081 6787 4.467084 GGGTCGAAGGATGCCGCA 62.467 66.667 0.00 0.00 0.00 5.69
4082 6788 3.195698 GGTCGAAGGATGCCGCAC 61.196 66.667 0.00 0.00 0.00 5.34
4083 6789 3.195698 GTCGAAGGATGCCGCACC 61.196 66.667 0.00 0.00 0.00 5.01
4084 6790 4.812476 TCGAAGGATGCCGCACCG 62.812 66.667 0.00 0.00 0.00 4.94
4101 6807 4.057428 GGCAGACGACAGCTCGGT 62.057 66.667 2.12 0.00 44.80 4.69
4102 6808 2.049063 GCAGACGACAGCTCGGTT 60.049 61.111 0.18 0.00 44.80 4.44
4103 6809 2.089349 GCAGACGACAGCTCGGTTC 61.089 63.158 0.18 0.00 44.80 3.62
4104 6810 1.285950 CAGACGACAGCTCGGTTCA 59.714 57.895 0.18 0.00 44.80 3.18
4105 6811 1.004277 CAGACGACAGCTCGGTTCAC 61.004 60.000 0.18 0.00 44.80 3.18
4106 6812 1.733399 GACGACAGCTCGGTTCACC 60.733 63.158 0.18 0.00 44.80 4.02
4107 6813 2.432628 CGACAGCTCGGTTCACCC 60.433 66.667 0.00 0.00 36.16 4.61
4108 6814 2.047179 GACAGCTCGGTTCACCCC 60.047 66.667 0.00 0.00 0.00 4.95
4109 6815 2.847234 ACAGCTCGGTTCACCCCA 60.847 61.111 0.00 0.00 0.00 4.96
4110 6816 2.046892 CAGCTCGGTTCACCCCAG 60.047 66.667 0.00 0.00 0.00 4.45
4111 6817 2.203788 AGCTCGGTTCACCCCAGA 60.204 61.111 0.00 0.00 0.00 3.86
4112 6818 1.841556 AGCTCGGTTCACCCCAGAA 60.842 57.895 0.00 0.00 0.00 3.02
4113 6819 1.671379 GCTCGGTTCACCCCAGAAC 60.671 63.158 0.00 0.00 45.50 3.01
4118 6824 3.524346 GTTCACCCCAGAACCCAAA 57.476 52.632 0.00 0.00 41.52 3.28
4119 6825 2.009681 GTTCACCCCAGAACCCAAAT 57.990 50.000 0.00 0.00 41.52 2.32
4120 6826 1.618343 GTTCACCCCAGAACCCAAATG 59.382 52.381 0.00 0.00 41.52 2.32
4121 6827 0.114168 TCACCCCAGAACCCAAATGG 59.886 55.000 0.00 0.00 41.37 3.16
4122 6828 0.114168 CACCCCAGAACCCAAATGGA 59.886 55.000 0.00 0.00 36.09 3.41
4123 6829 1.092549 ACCCCAGAACCCAAATGGAT 58.907 50.000 0.00 0.00 36.09 3.41
4124 6830 1.273211 ACCCCAGAACCCAAATGGATG 60.273 52.381 0.00 0.00 36.09 3.51
4125 6831 1.488390 CCCAGAACCCAAATGGATGG 58.512 55.000 0.00 3.86 40.35 3.51
4126 6832 0.826062 CCAGAACCCAAATGGATGGC 59.174 55.000 0.00 0.00 39.26 4.40
4127 6833 0.826062 CAGAACCCAAATGGATGGCC 59.174 55.000 0.00 0.00 39.26 5.36
4128 6834 0.712380 AGAACCCAAATGGATGGCCT 59.288 50.000 3.32 0.00 39.26 5.19
4129 6835 1.114627 GAACCCAAATGGATGGCCTC 58.885 55.000 3.32 0.00 39.26 4.70
4130 6836 0.325577 AACCCAAATGGATGGCCTCC 60.326 55.000 3.32 9.38 45.19 4.30
4137 6843 2.832201 GGATGGCCTCCAAGCTGC 60.832 66.667 14.36 0.00 44.26 5.25
4138 6844 2.044650 GATGGCCTCCAAGCTGCA 60.045 61.111 3.32 0.00 36.95 4.41
4139 6845 2.044252 ATGGCCTCCAAGCTGCAG 60.044 61.111 10.11 10.11 36.95 4.41
4140 6846 3.657038 ATGGCCTCCAAGCTGCAGG 62.657 63.158 17.12 3.33 36.95 4.85
4142 6848 4.039092 GCCTCCAAGCTGCAGGGA 62.039 66.667 17.12 12.77 0.00 4.20
4143 6849 2.271497 CCTCCAAGCTGCAGGGAG 59.729 66.667 23.53 23.53 46.24 4.30
4145 6851 3.905454 TCCAAGCTGCAGGGAGAA 58.095 55.556 17.12 0.00 0.00 2.87
4146 6852 1.681666 TCCAAGCTGCAGGGAGAAG 59.318 57.895 17.12 0.00 0.00 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
165 166 2.259818 CGAGCTAGGCGCCATAGG 59.740 66.667 31.54 15.94 40.39 2.57
250 252 4.868172 TTCCATGAGTCTTCCATTCCAT 57.132 40.909 0.00 0.00 0.00 3.41
306 308 3.776969 TCTTGATCAACTAGAGCCCACAT 59.223 43.478 3.38 0.00 0.00 3.21
354 356 4.201822 CCAGCTTTTAGCATTCGGTTCTAC 60.202 45.833 1.09 0.00 45.56 2.59
408 410 5.245977 TCACTCTCATCCTCACAAACACATA 59.754 40.000 0.00 0.00 0.00 2.29
440 445 2.341543 CTCGCTGCCCATATCGCT 59.658 61.111 0.00 0.00 0.00 4.93
517 522 4.469657 ACCCAACTCTGCAATAAAGTTCA 58.530 39.130 0.00 0.00 31.04 3.18
584 589 3.517296 TTCACTGTTGGATTAAGCCCA 57.483 42.857 7.42 1.00 0.00 5.36
590 595 8.877864 AAATCCACTTATTCACTGTTGGATTA 57.122 30.769 16.72 0.00 42.11 1.75
645 650 0.107654 GGACAAACTGCCGCCTCTAT 60.108 55.000 0.00 0.00 0.00 1.98
650 655 2.268076 ATGTGGACAAACTGCCGCC 61.268 57.895 0.00 0.00 33.79 6.13
661 666 3.128068 GGTACCGAAATTTCCATGTGGAC 59.872 47.826 12.54 7.52 45.39 4.02
736 741 7.611770 TGGATCCGAAAGACCATATATAACAG 58.388 38.462 7.39 0.00 0.00 3.16
744 749 4.901849 AGAAGATGGATCCGAAAGACCATA 59.098 41.667 7.39 0.00 42.23 2.74
791 796 1.973515 TCTTCTGCCAGAGAAAGAGCA 59.026 47.619 0.00 0.00 40.33 4.26
847 852 8.443160 CGTGTATGTGTTTAATGAGATTCTTGT 58.557 33.333 0.00 0.00 0.00 3.16
857 862 7.852454 CCTCATGATTCGTGTATGTGTTTAATG 59.148 37.037 0.00 0.00 0.00 1.90
872 877 4.554292 CATAGACACCTCCTCATGATTCG 58.446 47.826 0.00 0.00 0.00 3.34
880 885 2.035632 CTCCACCATAGACACCTCCTC 58.964 57.143 0.00 0.00 0.00 3.71
884 889 2.623418 TCACTCCACCATAGACACCT 57.377 50.000 0.00 0.00 0.00 4.00
907 912 7.286313 TGTACTGCACCATGATTTTATATCCA 58.714 34.615 0.00 0.00 0.00 3.41
1023 1028 0.179004 TGACCCAACCACACATGTCC 60.179 55.000 0.00 0.00 0.00 4.02
1053 1058 7.813148 TGAAACAAAAACAGATAAAACAACCGA 59.187 29.630 0.00 0.00 0.00 4.69
1136 1872 7.236640 AGAGGAGAGGAAAGTAGAAAACAAGAT 59.763 37.037 0.00 0.00 0.00 2.40
1148 1884 1.636519 TCGAGGAGAGGAGAGGAAAGT 59.363 52.381 0.00 0.00 0.00 2.66
1149 1885 2.297701 CTCGAGGAGAGGAGAGGAAAG 58.702 57.143 3.91 0.00 43.20 2.62
1568 2313 2.355986 CGGACGTGGAGGGATTGGA 61.356 63.158 0.00 0.00 0.00 3.53
1569 2314 2.186903 CGGACGTGGAGGGATTGG 59.813 66.667 0.00 0.00 0.00 3.16
1570 2315 2.186903 CCGGACGTGGAGGGATTG 59.813 66.667 0.00 0.00 0.00 2.67
1571 2316 2.038329 TCCGGACGTGGAGGGATT 59.962 61.111 0.00 0.00 33.05 3.01
1572 2317 2.758737 GTCCGGACGTGGAGGGAT 60.759 66.667 20.85 0.00 39.14 3.85
1587 2332 1.516603 GCCGCCGTCAACTAGAGTC 60.517 63.158 0.00 0.00 0.00 3.36
1590 2335 4.124351 CGGCCGCCGTCAACTAGA 62.124 66.667 24.08 0.00 42.73 2.43
1629 2374 0.381801 CAAGGCGCGAAAATATGGCT 59.618 50.000 12.10 0.00 39.09 4.75
1643 2388 1.244019 ACGATGGGAGCAAACAAGGC 61.244 55.000 0.00 0.00 0.00 4.35
1723 2480 4.065321 AGCATCCTTCCAGAATAGAACG 57.935 45.455 0.00 0.00 0.00 3.95
1786 2548 2.225255 GTCCTGAACAGCAAAAGAGAGC 59.775 50.000 0.00 0.00 0.00 4.09
1787 2549 2.478134 CGTCCTGAACAGCAAAAGAGAG 59.522 50.000 0.00 0.00 0.00 3.20
1788 2550 2.158957 ACGTCCTGAACAGCAAAAGAGA 60.159 45.455 0.00 0.00 0.00 3.10
1789 2551 2.213499 ACGTCCTGAACAGCAAAAGAG 58.787 47.619 0.00 0.00 0.00 2.85
1790 2552 2.325583 ACGTCCTGAACAGCAAAAGA 57.674 45.000 0.00 0.00 0.00 2.52
1807 2569 2.376808 ATTGCTGGAGTGAGAGAACG 57.623 50.000 0.00 0.00 0.00 3.95
1809 2571 4.259356 CATGAATTGCTGGAGTGAGAGAA 58.741 43.478 0.00 0.00 0.00 2.87
1817 2579 1.753073 GGGTTCCATGAATTGCTGGAG 59.247 52.381 0.00 0.00 42.32 3.86
1837 2599 1.901591 AGTTGTGCAGATGGTCTTGG 58.098 50.000 0.00 0.00 0.00 3.61
1916 2694 3.084579 CTCGAGCCGCACATTGTC 58.915 61.111 0.00 0.00 0.00 3.18
1937 2715 6.242508 TCAGATACGATAATCAAGACTCCG 57.757 41.667 0.00 0.00 0.00 4.63
1944 2722 6.230472 CCCCAACATCAGATACGATAATCAA 58.770 40.000 0.00 0.00 0.00 2.57
2015 2797 3.010250 AGAACAGGGGAGGGTTGTATTTC 59.990 47.826 0.00 0.00 0.00 2.17
2057 2839 3.005050 ACCTTGTGTTTCATGATGCACTG 59.995 43.478 22.39 16.88 33.44 3.66
2117 4464 9.330063 TCATCATCACAAATATTCCTAGTGTTC 57.670 33.333 8.95 0.00 0.00 3.18
2118 4465 9.113838 GTCATCATCACAAATATTCCTAGTGTT 57.886 33.333 8.95 1.55 0.00 3.32
2119 4466 7.439356 CGTCATCATCACAAATATTCCTAGTGT 59.561 37.037 8.95 0.00 0.00 3.55
2120 4467 7.439356 ACGTCATCATCACAAATATTCCTAGTG 59.561 37.037 0.00 0.00 0.00 2.74
2122 4469 7.095481 CCACGTCATCATCACAAATATTCCTAG 60.095 40.741 0.00 0.00 0.00 3.02
2123 4470 6.705825 CCACGTCATCATCACAAATATTCCTA 59.294 38.462 0.00 0.00 0.00 2.94
2124 4471 5.528690 CCACGTCATCATCACAAATATTCCT 59.471 40.000 0.00 0.00 0.00 3.36
2126 4473 6.603237 TCCACGTCATCATCACAAATATTC 57.397 37.500 0.00 0.00 0.00 1.75
2127 4474 6.823182 TCTTCCACGTCATCATCACAAATATT 59.177 34.615 0.00 0.00 0.00 1.28
2128 4475 6.348498 TCTTCCACGTCATCATCACAAATAT 58.652 36.000 0.00 0.00 0.00 1.28
2129 4476 5.729510 TCTTCCACGTCATCATCACAAATA 58.270 37.500 0.00 0.00 0.00 1.40
2131 4478 4.001618 TCTTCCACGTCATCATCACAAA 57.998 40.909 0.00 0.00 0.00 2.83
2132 4479 3.676291 TCTTCCACGTCATCATCACAA 57.324 42.857 0.00 0.00 0.00 3.33
2210 4603 9.886132 GTAGTGTCCCAGGTAATATAAATATGG 57.114 37.037 0.00 0.00 0.00 2.74
2217 4610 5.842328 CCCTTGTAGTGTCCCAGGTAATATA 59.158 44.000 0.00 0.00 0.00 0.86
2234 4632 3.271225 TCATCTCAGGTAGACCCCTTGTA 59.729 47.826 0.00 0.00 36.93 2.41
2239 4637 2.896685 CTCATCATCTCAGGTAGACCCC 59.103 54.545 0.00 0.00 36.93 4.95
2337 4752 6.015434 ACACCATCAAAGTATTTCCAGTTTCC 60.015 38.462 0.00 0.00 35.03 3.13
2364 4779 1.212935 CCACCCTTCCAATGTAGGAGG 59.787 57.143 0.83 0.00 39.25 4.30
2385 4808 1.571955 TCCTCCATAAGCACAGCAGA 58.428 50.000 0.00 0.00 0.00 4.26
2489 4935 5.761234 TGTAGCATTTGGTAAACGAGAAGTT 59.239 36.000 0.00 0.00 46.76 2.66
2490 4936 5.302360 TGTAGCATTTGGTAAACGAGAAGT 58.698 37.500 0.00 0.00 0.00 3.01
2589 5138 4.214310 TCAAAAAGATTCCAAGAGGCACA 58.786 39.130 0.00 0.00 33.74 4.57
2590 5139 4.279420 ACTCAAAAAGATTCCAAGAGGCAC 59.721 41.667 0.00 0.00 33.74 5.01
2639 5192 6.191315 AGTTTATCTCAGAAGTAGAGCAGGA 58.809 40.000 0.00 0.00 33.15 3.86
2668 5221 5.336102 ACCCAAATCAGGAACAGATCAATT 58.664 37.500 0.00 0.00 31.88 2.32
2707 5260 5.634896 CATTGTTATTGACAGAGCAAGACC 58.365 41.667 0.00 0.00 39.94 3.85
2750 5316 1.539929 CCTGATGGATCTCAGCCGAAC 60.540 57.143 6.47 0.00 41.12 3.95
2766 5332 2.317371 AGAGCTCCTCTTTGACCTGA 57.683 50.000 10.93 0.00 37.60 3.86
3445 6028 7.609760 ATGCATAAGACAAACGAAATACAGA 57.390 32.000 0.00 0.00 0.00 3.41
3495 6078 4.051922 GAGTAGCCAAATAGTCATCACCG 58.948 47.826 0.00 0.00 0.00 4.94
3533 6141 8.409371 CAGTTAGAGAGCAATCATGTCTTACTA 58.591 37.037 0.00 0.00 0.00 1.82
3718 6424 2.678836 TCTTGAGCGTTCGTTCCAAAAA 59.321 40.909 6.60 0.00 0.00 1.94
3719 6425 2.281517 TCTTGAGCGTTCGTTCCAAAA 58.718 42.857 6.60 0.00 0.00 2.44
3720 6426 1.942677 TCTTGAGCGTTCGTTCCAAA 58.057 45.000 6.60 0.00 0.00 3.28
3721 6427 1.864711 CTTCTTGAGCGTTCGTTCCAA 59.135 47.619 6.60 2.46 0.00 3.53
3722 6428 1.067974 TCTTCTTGAGCGTTCGTTCCA 59.932 47.619 6.60 0.00 0.00 3.53
3723 6429 1.721926 CTCTTCTTGAGCGTTCGTTCC 59.278 52.381 6.60 0.00 35.84 3.62
3733 6439 0.322008 AAAGCCGGGCTCTTCTTGAG 60.322 55.000 24.08 0.00 45.33 3.02
3734 6440 0.606401 CAAAGCCGGGCTCTTCTTGA 60.606 55.000 24.08 0.00 38.25 3.02
3735 6441 0.606401 TCAAAGCCGGGCTCTTCTTG 60.606 55.000 24.08 21.74 38.25 3.02
3736 6442 0.110486 TTCAAAGCCGGGCTCTTCTT 59.890 50.000 24.08 10.16 38.25 2.52
3737 6443 0.329596 ATTCAAAGCCGGGCTCTTCT 59.670 50.000 24.08 2.98 38.25 2.85
3738 6444 1.177401 AATTCAAAGCCGGGCTCTTC 58.823 50.000 24.08 0.00 38.25 2.87
3739 6445 2.492088 GTTAATTCAAAGCCGGGCTCTT 59.508 45.455 24.08 15.43 38.25 2.85
3740 6446 2.092323 GTTAATTCAAAGCCGGGCTCT 58.908 47.619 24.08 5.15 38.25 4.09
3741 6447 1.816224 TGTTAATTCAAAGCCGGGCTC 59.184 47.619 24.08 6.82 38.25 4.70
3742 6448 1.917872 TGTTAATTCAAAGCCGGGCT 58.082 45.000 17.69 17.69 42.56 5.19
3743 6449 2.734276 TTGTTAATTCAAAGCCGGGC 57.266 45.000 12.11 12.11 0.00 6.13
3750 6456 5.694006 CGGTTGATGGCTTTGTTAATTCAAA 59.306 36.000 0.00 0.00 36.18 2.69
3751 6457 5.226396 CGGTTGATGGCTTTGTTAATTCAA 58.774 37.500 0.00 0.00 0.00 2.69
3752 6458 4.321601 CCGGTTGATGGCTTTGTTAATTCA 60.322 41.667 0.00 0.00 0.00 2.57
3753 6459 4.173256 CCGGTTGATGGCTTTGTTAATTC 58.827 43.478 0.00 0.00 0.00 2.17
3754 6460 4.186856 CCGGTTGATGGCTTTGTTAATT 57.813 40.909 0.00 0.00 0.00 1.40
3755 6461 3.866883 CCGGTTGATGGCTTTGTTAAT 57.133 42.857 0.00 0.00 0.00 1.40
3765 6471 0.182537 TAATCCTGGCCGGTTGATGG 59.817 55.000 11.58 0.00 0.00 3.51
3766 6472 1.308998 GTAATCCTGGCCGGTTGATG 58.691 55.000 11.58 0.00 0.00 3.07
3767 6473 0.916086 TGTAATCCTGGCCGGTTGAT 59.084 50.000 11.58 4.00 0.00 2.57
3768 6474 0.693622 TTGTAATCCTGGCCGGTTGA 59.306 50.000 11.58 1.27 0.00 3.18
3769 6475 1.094785 CTTGTAATCCTGGCCGGTTG 58.905 55.000 11.58 0.00 0.00 3.77
3770 6476 0.034477 CCTTGTAATCCTGGCCGGTT 60.034 55.000 11.58 1.23 0.00 4.44
3771 6477 0.912487 TCCTTGTAATCCTGGCCGGT 60.912 55.000 11.58 0.00 0.00 5.28
3772 6478 0.463833 GTCCTTGTAATCCTGGCCGG 60.464 60.000 3.88 3.88 0.00 6.13
3773 6479 0.251916 TGTCCTTGTAATCCTGGCCG 59.748 55.000 0.00 0.00 0.00 6.13
3774 6480 2.492088 GTTTGTCCTTGTAATCCTGGCC 59.508 50.000 0.00 0.00 0.00 5.36
3775 6481 3.057526 GTGTTTGTCCTTGTAATCCTGGC 60.058 47.826 0.00 0.00 0.00 4.85
3776 6482 4.398319 AGTGTTTGTCCTTGTAATCCTGG 58.602 43.478 0.00 0.00 0.00 4.45
3777 6483 6.485313 TGTAAGTGTTTGTCCTTGTAATCCTG 59.515 38.462 0.00 0.00 0.00 3.86
3778 6484 6.597562 TGTAAGTGTTTGTCCTTGTAATCCT 58.402 36.000 0.00 0.00 0.00 3.24
3779 6485 6.870971 TGTAAGTGTTTGTCCTTGTAATCC 57.129 37.500 0.00 0.00 0.00 3.01
3780 6486 8.564574 TCATTGTAAGTGTTTGTCCTTGTAATC 58.435 33.333 0.00 0.00 0.00 1.75
3781 6487 8.458573 TCATTGTAAGTGTTTGTCCTTGTAAT 57.541 30.769 0.00 0.00 0.00 1.89
3782 6488 7.867305 TCATTGTAAGTGTTTGTCCTTGTAA 57.133 32.000 0.00 0.00 0.00 2.41
3783 6489 7.867305 TTCATTGTAAGTGTTTGTCCTTGTA 57.133 32.000 0.00 0.00 0.00 2.41
3784 6490 6.767524 TTCATTGTAAGTGTTTGTCCTTGT 57.232 33.333 0.00 0.00 0.00 3.16
3785 6491 7.759433 ACTTTTCATTGTAAGTGTTTGTCCTTG 59.241 33.333 6.26 0.00 33.55 3.61
3786 6492 7.836842 ACTTTTCATTGTAAGTGTTTGTCCTT 58.163 30.769 6.26 0.00 33.55 3.36
3787 6493 7.404671 ACTTTTCATTGTAAGTGTTTGTCCT 57.595 32.000 6.26 0.00 33.55 3.85
3788 6494 9.575783 TTTACTTTTCATTGTAAGTGTTTGTCC 57.424 29.630 13.48 0.00 36.16 4.02
3790 6496 9.581099 CCTTTACTTTTCATTGTAAGTGTTTGT 57.419 29.630 13.48 0.00 36.16 2.83
3791 6497 9.796120 TCCTTTACTTTTCATTGTAAGTGTTTG 57.204 29.630 13.48 4.65 36.16 2.93
3818 6524 1.269206 TGTACTCGTCGCTCGGTTTTT 60.269 47.619 0.00 0.00 40.32 1.94
3819 6525 0.311790 TGTACTCGTCGCTCGGTTTT 59.688 50.000 0.00 0.00 40.32 2.43
3820 6526 0.311790 TTGTACTCGTCGCTCGGTTT 59.688 50.000 0.00 0.00 40.32 3.27
3821 6527 0.109873 CTTGTACTCGTCGCTCGGTT 60.110 55.000 0.00 0.00 40.32 4.44
3822 6528 1.500844 CTTGTACTCGTCGCTCGGT 59.499 57.895 0.00 1.28 40.32 4.69
3823 6529 1.226323 CCTTGTACTCGTCGCTCGG 60.226 63.158 0.00 0.00 40.32 4.63
3824 6530 0.167470 TTCCTTGTACTCGTCGCTCG 59.833 55.000 0.00 0.00 41.41 5.03
3825 6531 1.199558 AGTTCCTTGTACTCGTCGCTC 59.800 52.381 0.00 0.00 0.00 5.03
3826 6532 1.199558 GAGTTCCTTGTACTCGTCGCT 59.800 52.381 0.00 0.00 33.39 4.93
3827 6533 1.068748 TGAGTTCCTTGTACTCGTCGC 60.069 52.381 0.00 0.00 43.90 5.19
3828 6534 2.983402 TGAGTTCCTTGTACTCGTCG 57.017 50.000 0.00 0.00 43.90 5.12
3829 6535 2.987821 GCTTGAGTTCCTTGTACTCGTC 59.012 50.000 0.00 0.00 43.90 4.20
3830 6536 2.364324 TGCTTGAGTTCCTTGTACTCGT 59.636 45.455 0.00 0.00 43.90 4.18
3831 6537 3.026630 TGCTTGAGTTCCTTGTACTCG 57.973 47.619 0.00 0.00 43.90 4.18
3832 6538 5.065988 TGTTTTGCTTGAGTTCCTTGTACTC 59.934 40.000 0.00 0.00 41.86 2.59
3833 6539 4.947388 TGTTTTGCTTGAGTTCCTTGTACT 59.053 37.500 0.00 0.00 0.00 2.73
3834 6540 5.243426 TGTTTTGCTTGAGTTCCTTGTAC 57.757 39.130 0.00 0.00 0.00 2.90
3835 6541 5.417580 AGTTGTTTTGCTTGAGTTCCTTGTA 59.582 36.000 0.00 0.00 0.00 2.41
3836 6542 4.220602 AGTTGTTTTGCTTGAGTTCCTTGT 59.779 37.500 0.00 0.00 0.00 3.16
3837 6543 4.747810 AGTTGTTTTGCTTGAGTTCCTTG 58.252 39.130 0.00 0.00 0.00 3.61
3838 6544 4.462483 TGAGTTGTTTTGCTTGAGTTCCTT 59.538 37.500 0.00 0.00 0.00 3.36
3839 6545 4.016444 TGAGTTGTTTTGCTTGAGTTCCT 58.984 39.130 0.00 0.00 0.00 3.36
3840 6546 4.370364 TGAGTTGTTTTGCTTGAGTTCC 57.630 40.909 0.00 0.00 0.00 3.62
3841 6547 4.800471 CCTTGAGTTGTTTTGCTTGAGTTC 59.200 41.667 0.00 0.00 0.00 3.01
3842 6548 4.747810 CCTTGAGTTGTTTTGCTTGAGTT 58.252 39.130 0.00 0.00 0.00 3.01
3843 6549 3.429410 GCCTTGAGTTGTTTTGCTTGAGT 60.429 43.478 0.00 0.00 0.00 3.41
3844 6550 3.118542 GCCTTGAGTTGTTTTGCTTGAG 58.881 45.455 0.00 0.00 0.00 3.02
3845 6551 2.495270 TGCCTTGAGTTGTTTTGCTTGA 59.505 40.909 0.00 0.00 0.00 3.02
3846 6552 2.861935 CTGCCTTGAGTTGTTTTGCTTG 59.138 45.455 0.00 0.00 0.00 4.01
3847 6553 2.739609 GCTGCCTTGAGTTGTTTTGCTT 60.740 45.455 0.00 0.00 0.00 3.91
3848 6554 1.202452 GCTGCCTTGAGTTGTTTTGCT 60.202 47.619 0.00 0.00 0.00 3.91
3849 6555 1.211743 GCTGCCTTGAGTTGTTTTGC 58.788 50.000 0.00 0.00 0.00 3.68
3850 6556 2.466846 CTGCTGCCTTGAGTTGTTTTG 58.533 47.619 0.00 0.00 0.00 2.44
3851 6557 1.202452 GCTGCTGCCTTGAGTTGTTTT 60.202 47.619 3.85 0.00 0.00 2.43
3852 6558 0.386838 GCTGCTGCCTTGAGTTGTTT 59.613 50.000 3.85 0.00 0.00 2.83
3853 6559 0.752743 TGCTGCTGCCTTGAGTTGTT 60.753 50.000 13.47 0.00 38.71 2.83
3854 6560 1.152902 TGCTGCTGCCTTGAGTTGT 60.153 52.632 13.47 0.00 38.71 3.32
3855 6561 0.887836 TCTGCTGCTGCCTTGAGTTG 60.888 55.000 13.47 0.00 38.71 3.16
3856 6562 0.605860 CTCTGCTGCTGCCTTGAGTT 60.606 55.000 13.47 0.00 38.71 3.01
3857 6563 1.003597 CTCTGCTGCTGCCTTGAGT 60.004 57.895 13.47 0.00 38.71 3.41
3858 6564 1.003597 ACTCTGCTGCTGCCTTGAG 60.004 57.895 20.28 20.28 38.71 3.02
3859 6565 1.302271 CACTCTGCTGCTGCCTTGA 60.302 57.895 13.47 7.81 38.71 3.02
3860 6566 1.299562 CTCACTCTGCTGCTGCCTTG 61.300 60.000 13.47 5.32 38.71 3.61
3861 6567 1.003597 CTCACTCTGCTGCTGCCTT 60.004 57.895 13.47 0.00 38.71 4.35
3862 6568 2.663796 CTCACTCTGCTGCTGCCT 59.336 61.111 13.47 0.00 38.71 4.75
3863 6569 3.126225 GCTCACTCTGCTGCTGCC 61.126 66.667 13.47 0.00 38.71 4.85
3864 6570 3.126225 GGCTCACTCTGCTGCTGC 61.126 66.667 8.89 8.89 40.20 5.25
3865 6571 0.677098 ATTGGCTCACTCTGCTGCTG 60.677 55.000 0.00 0.00 0.00 4.41
3866 6572 0.677098 CATTGGCTCACTCTGCTGCT 60.677 55.000 0.00 0.00 0.00 4.24
3867 6573 1.801332 CATTGGCTCACTCTGCTGC 59.199 57.895 0.00 0.00 0.00 5.25
3868 6574 0.958876 TGCATTGGCTCACTCTGCTG 60.959 55.000 0.00 0.00 41.91 4.41
3869 6575 0.034380 ATGCATTGGCTCACTCTGCT 60.034 50.000 0.00 0.00 41.91 4.24
3870 6576 0.381089 GATGCATTGGCTCACTCTGC 59.619 55.000 0.00 0.00 41.91 4.26
3871 6577 1.400846 GTGATGCATTGGCTCACTCTG 59.599 52.381 0.00 0.00 41.17 3.35
3872 6578 1.681166 GGTGATGCATTGGCTCACTCT 60.681 52.381 15.08 0.00 42.58 3.24
3873 6579 0.737219 GGTGATGCATTGGCTCACTC 59.263 55.000 15.08 4.39 42.58 3.51
3874 6580 0.038599 TGGTGATGCATTGGCTCACT 59.961 50.000 15.08 0.00 42.58 3.41
3875 6581 0.171903 GTGGTGATGCATTGGCTCAC 59.828 55.000 0.00 4.57 42.41 3.51
3876 6582 1.307355 CGTGGTGATGCATTGGCTCA 61.307 55.000 0.00 0.00 41.91 4.26
3877 6583 1.430632 CGTGGTGATGCATTGGCTC 59.569 57.895 0.00 0.00 41.91 4.70
3878 6584 2.703798 GCGTGGTGATGCATTGGCT 61.704 57.895 0.00 0.00 41.91 4.75
3879 6585 2.202650 GCGTGGTGATGCATTGGC 60.203 61.111 0.00 0.00 41.68 4.52
3880 6586 1.138036 CAGCGTGGTGATGCATTGG 59.862 57.895 0.00 0.00 36.46 3.16
3881 6587 4.777781 CAGCGTGGTGATGCATTG 57.222 55.556 0.00 0.00 36.46 2.82
3895 6601 0.890996 AGTTGGGTGTTAGCAGCAGC 60.891 55.000 11.00 0.00 44.31 5.25
3896 6602 0.877071 CAGTTGGGTGTTAGCAGCAG 59.123 55.000 11.00 0.00 44.31 4.24
3897 6603 0.537143 CCAGTTGGGTGTTAGCAGCA 60.537 55.000 11.00 0.00 44.31 4.41
3898 6604 0.250727 TCCAGTTGGGTGTTAGCAGC 60.251 55.000 0.00 0.00 41.99 5.25
3899 6605 1.523758 GTCCAGTTGGGTGTTAGCAG 58.476 55.000 0.00 0.00 38.11 4.24
3900 6606 0.250124 CGTCCAGTTGGGTGTTAGCA 60.250 55.000 0.00 0.00 38.11 3.49
3901 6607 0.034337 TCGTCCAGTTGGGTGTTAGC 59.966 55.000 0.00 0.00 38.11 3.09
3902 6608 1.607251 GGTCGTCCAGTTGGGTGTTAG 60.607 57.143 0.00 0.00 38.11 2.34
3903 6609 0.393820 GGTCGTCCAGTTGGGTGTTA 59.606 55.000 0.00 0.00 38.11 2.41
3904 6610 1.147600 GGTCGTCCAGTTGGGTGTT 59.852 57.895 0.00 0.00 38.11 3.32
3905 6611 0.470456 TAGGTCGTCCAGTTGGGTGT 60.470 55.000 0.51 0.00 38.11 4.16
3906 6612 0.037605 GTAGGTCGTCCAGTTGGGTG 60.038 60.000 0.51 0.00 38.11 4.61
3907 6613 0.470456 TGTAGGTCGTCCAGTTGGGT 60.470 55.000 0.51 0.00 38.11 4.51
3908 6614 0.037605 GTGTAGGTCGTCCAGTTGGG 60.038 60.000 0.51 0.00 35.89 4.12
3909 6615 0.037605 GGTGTAGGTCGTCCAGTTGG 60.038 60.000 0.51 0.00 35.89 3.77
3910 6616 0.677288 TGGTGTAGGTCGTCCAGTTG 59.323 55.000 0.51 0.00 35.89 3.16
3911 6617 1.069668 GTTGGTGTAGGTCGTCCAGTT 59.930 52.381 0.51 0.00 35.89 3.16
3912 6618 0.677842 GTTGGTGTAGGTCGTCCAGT 59.322 55.000 0.51 0.00 35.89 4.00
3913 6619 0.677288 TGTTGGTGTAGGTCGTCCAG 59.323 55.000 0.51 0.00 35.89 3.86
3914 6620 0.677288 CTGTTGGTGTAGGTCGTCCA 59.323 55.000 0.51 0.00 35.89 4.02
3915 6621 0.963962 TCTGTTGGTGTAGGTCGTCC 59.036 55.000 0.00 0.00 0.00 4.79
3916 6622 2.223876 TGTTCTGTTGGTGTAGGTCGTC 60.224 50.000 0.00 0.00 0.00 4.20
3917 6623 1.758280 TGTTCTGTTGGTGTAGGTCGT 59.242 47.619 0.00 0.00 0.00 4.34
3918 6624 2.519377 TGTTCTGTTGGTGTAGGTCG 57.481 50.000 0.00 0.00 0.00 4.79
3919 6625 4.638865 AGTTTTGTTCTGTTGGTGTAGGTC 59.361 41.667 0.00 0.00 0.00 3.85
3920 6626 4.595986 AGTTTTGTTCTGTTGGTGTAGGT 58.404 39.130 0.00 0.00 0.00 3.08
3921 6627 5.238650 CCTAGTTTTGTTCTGTTGGTGTAGG 59.761 44.000 0.00 0.00 0.00 3.18
3922 6628 5.238650 CCCTAGTTTTGTTCTGTTGGTGTAG 59.761 44.000 0.00 0.00 0.00 2.74
3923 6629 5.104444 TCCCTAGTTTTGTTCTGTTGGTGTA 60.104 40.000 0.00 0.00 0.00 2.90
3924 6630 3.951680 CCCTAGTTTTGTTCTGTTGGTGT 59.048 43.478 0.00 0.00 0.00 4.16
3925 6631 4.036380 GTCCCTAGTTTTGTTCTGTTGGTG 59.964 45.833 0.00 0.00 0.00 4.17
3926 6632 4.079958 AGTCCCTAGTTTTGTTCTGTTGGT 60.080 41.667 0.00 0.00 0.00 3.67
3927 6633 4.461198 AGTCCCTAGTTTTGTTCTGTTGG 58.539 43.478 0.00 0.00 0.00 3.77
3928 6634 5.221048 CCAAGTCCCTAGTTTTGTTCTGTTG 60.221 44.000 0.00 0.00 0.00 3.33
3929 6635 4.887655 CCAAGTCCCTAGTTTTGTTCTGTT 59.112 41.667 0.00 0.00 0.00 3.16
3930 6636 4.461198 CCAAGTCCCTAGTTTTGTTCTGT 58.539 43.478 0.00 0.00 0.00 3.41
3931 6637 3.821033 CCCAAGTCCCTAGTTTTGTTCTG 59.179 47.826 0.00 0.00 0.00 3.02
3932 6638 3.720002 TCCCAAGTCCCTAGTTTTGTTCT 59.280 43.478 0.00 0.00 0.00 3.01
3933 6639 4.072839 CTCCCAAGTCCCTAGTTTTGTTC 58.927 47.826 0.00 0.00 0.00 3.18
3934 6640 3.181433 CCTCCCAAGTCCCTAGTTTTGTT 60.181 47.826 0.00 0.00 0.00 2.83
3935 6641 2.375509 CCTCCCAAGTCCCTAGTTTTGT 59.624 50.000 0.00 0.00 0.00 2.83
3936 6642 2.642807 TCCTCCCAAGTCCCTAGTTTTG 59.357 50.000 0.00 0.00 0.00 2.44
3937 6643 2.999928 TCCTCCCAAGTCCCTAGTTTT 58.000 47.619 0.00 0.00 0.00 2.43
3938 6644 2.735259 TCCTCCCAAGTCCCTAGTTT 57.265 50.000 0.00 0.00 0.00 2.66
3939 6645 2.735259 TTCCTCCCAAGTCCCTAGTT 57.265 50.000 0.00 0.00 0.00 2.24
3940 6646 2.482494 CATTCCTCCCAAGTCCCTAGT 58.518 52.381 0.00 0.00 0.00 2.57
3941 6647 1.141858 GCATTCCTCCCAAGTCCCTAG 59.858 57.143 0.00 0.00 0.00 3.02
3942 6648 1.213296 GCATTCCTCCCAAGTCCCTA 58.787 55.000 0.00 0.00 0.00 3.53
3943 6649 0.846427 TGCATTCCTCCCAAGTCCCT 60.846 55.000 0.00 0.00 0.00 4.20
3944 6650 0.681243 GTGCATTCCTCCCAAGTCCC 60.681 60.000 0.00 0.00 0.00 4.46
3945 6651 0.681243 GGTGCATTCCTCCCAAGTCC 60.681 60.000 0.00 0.00 0.00 3.85
3946 6652 0.038166 TGGTGCATTCCTCCCAAGTC 59.962 55.000 0.00 0.00 0.00 3.01
3947 6653 0.251341 GTGGTGCATTCCTCCCAAGT 60.251 55.000 0.00 0.00 0.00 3.16
3948 6654 0.967380 GGTGGTGCATTCCTCCCAAG 60.967 60.000 3.58 0.00 35.72 3.61
3949 6655 1.076549 GGTGGTGCATTCCTCCCAA 59.923 57.895 3.58 0.00 35.72 4.12
3950 6656 2.763215 GGTGGTGCATTCCTCCCA 59.237 61.111 3.58 0.00 35.72 4.37
3951 6657 2.438434 CGGTGGTGCATTCCTCCC 60.438 66.667 8.45 1.89 37.72 4.30
3952 6658 3.134127 GCGGTGGTGCATTCCTCC 61.134 66.667 4.70 4.70 37.66 4.30
3953 6659 3.499737 CGCGGTGGTGCATTCCTC 61.500 66.667 0.00 0.00 34.15 3.71
3961 6667 4.389576 GAAGCTTGCGCGGTGGTG 62.390 66.667 8.83 0.00 42.32 4.17
3964 6670 4.724697 CACGAAGCTTGCGCGGTG 62.725 66.667 8.83 0.07 42.32 4.94
3965 6671 4.961511 TCACGAAGCTTGCGCGGT 62.962 61.111 8.83 0.00 42.32 5.68
3966 6672 3.425938 GATCACGAAGCTTGCGCGG 62.426 63.158 8.83 4.18 42.32 6.46
3967 6673 2.020559 GATCACGAAGCTTGCGCG 59.979 61.111 2.10 0.00 42.32 6.86
3968 6674 0.930310 TATGATCACGAAGCTTGCGC 59.070 50.000 2.10 0.00 0.00 6.09
3969 6675 1.070975 GCTATGATCACGAAGCTTGCG 60.071 52.381 2.10 10.24 32.18 4.85
3970 6676 1.262683 GGCTATGATCACGAAGCTTGC 59.737 52.381 20.05 7.73 35.30 4.01
3971 6677 2.286294 GTGGCTATGATCACGAAGCTTG 59.714 50.000 20.05 0.00 35.30 4.01
3972 6678 2.555199 GTGGCTATGATCACGAAGCTT 58.445 47.619 20.05 0.00 35.30 3.74
3973 6679 1.202580 GGTGGCTATGATCACGAAGCT 60.203 52.381 20.05 0.00 35.30 3.74
3974 6680 1.221414 GGTGGCTATGATCACGAAGC 58.779 55.000 15.02 15.02 34.93 3.86
3975 6681 1.414181 AGGGTGGCTATGATCACGAAG 59.586 52.381 0.00 0.00 34.93 3.79
3976 6682 1.412710 GAGGGTGGCTATGATCACGAA 59.587 52.381 0.00 0.00 34.93 3.85
3977 6683 1.040646 GAGGGTGGCTATGATCACGA 58.959 55.000 0.00 0.00 34.93 4.35
3978 6684 0.319040 CGAGGGTGGCTATGATCACG 60.319 60.000 0.00 0.00 34.93 4.35
3979 6685 0.034059 CCGAGGGTGGCTATGATCAC 59.966 60.000 0.00 0.00 0.00 3.06
3980 6686 0.105709 TCCGAGGGTGGCTATGATCA 60.106 55.000 0.00 0.00 0.00 2.92
3981 6687 0.605589 CTCCGAGGGTGGCTATGATC 59.394 60.000 0.00 0.00 0.00 2.92
3982 6688 1.476007 GCTCCGAGGGTGGCTATGAT 61.476 60.000 0.00 0.00 0.00 2.45
3983 6689 2.134287 GCTCCGAGGGTGGCTATGA 61.134 63.158 0.00 0.00 0.00 2.15
3984 6690 2.423446 GCTCCGAGGGTGGCTATG 59.577 66.667 0.00 0.00 0.00 2.23
3985 6691 2.844839 GGCTCCGAGGGTGGCTAT 60.845 66.667 0.00 0.00 38.46 2.97
3986 6692 4.392166 TGGCTCCGAGGGTGGCTA 62.392 66.667 10.88 0.00 41.37 3.93
3992 6698 4.559063 CATGGCTGGCTCCGAGGG 62.559 72.222 2.00 0.00 0.00 4.30
3993 6699 4.559063 CCATGGCTGGCTCCGAGG 62.559 72.222 0.00 0.00 35.23 4.63
3994 6700 3.473647 TCCATGGCTGGCTCCGAG 61.474 66.667 6.96 0.00 42.80 4.63
3995 6701 3.785859 GTCCATGGCTGGCTCCGA 61.786 66.667 6.96 0.00 42.80 4.55
3996 6702 4.864334 GGTCCATGGCTGGCTCCG 62.864 72.222 6.96 0.00 42.80 4.63
3997 6703 3.711059 CTGGTCCATGGCTGGCTCC 62.711 68.421 6.96 3.17 42.80 4.70
3998 6704 2.124403 CTGGTCCATGGCTGGCTC 60.124 66.667 6.96 0.00 42.80 4.70
3999 6705 2.611800 TCTGGTCCATGGCTGGCT 60.612 61.111 6.96 0.00 42.80 4.75
4000 6706 2.439156 GTCTGGTCCATGGCTGGC 60.439 66.667 6.96 0.00 42.80 4.85
4001 6707 2.273449 GGTCTGGTCCATGGCTGG 59.727 66.667 6.96 0.00 44.64 4.85
4002 6708 1.377725 GTGGTCTGGTCCATGGCTG 60.378 63.158 6.96 0.00 39.81 4.85
4003 6709 2.606587 GGTGGTCTGGTCCATGGCT 61.607 63.158 6.96 0.00 39.81 4.75
4004 6710 2.044946 GGTGGTCTGGTCCATGGC 60.045 66.667 6.96 1.78 39.81 4.40
4005 6711 0.107017 GATGGTGGTCTGGTCCATGG 60.107 60.000 4.97 4.97 41.33 3.66
4006 6712 0.914644 AGATGGTGGTCTGGTCCATG 59.085 55.000 0.00 0.00 41.33 3.66
4007 6713 0.914644 CAGATGGTGGTCTGGTCCAT 59.085 55.000 0.00 0.00 43.54 3.41
4008 6714 2.045013 AACAGATGGTGGTCTGGTCCA 61.045 52.381 8.57 0.00 42.32 4.02
4009 6715 0.693049 AACAGATGGTGGTCTGGTCC 59.307 55.000 8.57 0.00 42.32 4.46
4010 6716 2.567615 AGTAACAGATGGTGGTCTGGTC 59.432 50.000 8.57 0.00 42.32 4.02
4014 6720 1.279271 GGCAGTAACAGATGGTGGTCT 59.721 52.381 0.00 0.00 0.00 3.85
4015 6721 1.279271 AGGCAGTAACAGATGGTGGTC 59.721 52.381 0.00 0.00 0.00 4.02
4016 6722 1.279271 GAGGCAGTAACAGATGGTGGT 59.721 52.381 0.00 0.00 0.00 4.16
4017 6723 1.556911 AGAGGCAGTAACAGATGGTGG 59.443 52.381 0.00 0.00 0.00 4.61
4018 6724 2.625737 CAGAGGCAGTAACAGATGGTG 58.374 52.381 0.00 0.00 0.00 4.17
4019 6725 1.065854 GCAGAGGCAGTAACAGATGGT 60.066 52.381 0.00 0.00 40.72 3.55
4020 6726 1.661341 GCAGAGGCAGTAACAGATGG 58.339 55.000 0.00 0.00 40.72 3.51
4033 6739 2.308722 TAGGGGCCCTTTGCAGAGG 61.309 63.158 33.98 16.42 43.89 3.69
4034 6740 1.077429 GTAGGGGCCCTTTGCAGAG 60.077 63.158 33.98 0.00 43.89 3.35
4035 6741 2.612493 GGTAGGGGCCCTTTGCAGA 61.612 63.158 33.98 8.78 43.89 4.26
4036 6742 2.043953 GGTAGGGGCCCTTTGCAG 60.044 66.667 33.98 0.00 43.89 4.41
4037 6743 3.668142 GGGTAGGGGCCCTTTGCA 61.668 66.667 33.98 10.20 45.22 4.08
4039 6745 2.224805 GAAGGGGTAGGGGCCCTTTG 62.225 65.000 33.98 0.00 46.38 2.77
4044 6750 2.461739 GGATGAAGGGGTAGGGGCC 61.462 68.421 0.00 0.00 0.00 5.80
4045 6751 1.386057 AGGATGAAGGGGTAGGGGC 60.386 63.158 0.00 0.00 0.00 5.80
4046 6752 1.062488 CCAGGATGAAGGGGTAGGGG 61.062 65.000 0.00 0.00 39.69 4.79
4047 6753 1.062488 CCCAGGATGAAGGGGTAGGG 61.062 65.000 0.00 0.00 41.58 3.53
4048 6754 2.544768 CCCAGGATGAAGGGGTAGG 58.455 63.158 0.00 0.00 41.58 3.18
4054 6760 3.768633 CTTCGACCCAGGATGAAGG 57.231 57.895 12.09 0.00 39.69 3.46
4055 6761 1.195115 TCCTTCGACCCAGGATGAAG 58.805 55.000 0.00 12.66 39.69 3.02
4056 6762 3.392066 TCCTTCGACCCAGGATGAA 57.608 52.632 0.00 0.00 39.69 2.57
4060 6766 2.367202 GGCATCCTTCGACCCAGGA 61.367 63.158 6.79 6.79 44.86 3.86
4061 6767 2.190578 GGCATCCTTCGACCCAGG 59.809 66.667 0.00 0.00 0.00 4.45
4062 6768 2.202932 CGGCATCCTTCGACCCAG 60.203 66.667 0.00 0.00 0.00 4.45
4063 6769 4.467084 GCGGCATCCTTCGACCCA 62.467 66.667 0.00 0.00 0.00 4.51
4064 6770 4.467084 TGCGGCATCCTTCGACCC 62.467 66.667 0.00 0.00 0.00 4.46
4065 6771 3.195698 GTGCGGCATCCTTCGACC 61.196 66.667 5.72 0.00 0.00 4.79
4066 6772 3.195698 GGTGCGGCATCCTTCGAC 61.196 66.667 5.72 0.00 0.00 4.20
4067 6773 4.812476 CGGTGCGGCATCCTTCGA 62.812 66.667 5.72 0.00 0.00 3.71
4080 6786 4.363990 AGCTGTCGTCTGCCGGTG 62.364 66.667 1.90 0.00 38.92 4.94
4081 6787 4.057428 GAGCTGTCGTCTGCCGGT 62.057 66.667 1.90 0.00 38.92 5.28
4084 6790 3.575351 AACCGAGCTGTCGTCTGCC 62.575 63.158 7.82 0.18 45.30 4.85
4085 6791 2.049063 AACCGAGCTGTCGTCTGC 60.049 61.111 0.00 3.47 45.30 4.26
4086 6792 1.004277 GTGAACCGAGCTGTCGTCTG 61.004 60.000 0.00 0.00 45.30 3.51
4087 6793 1.286260 GTGAACCGAGCTGTCGTCT 59.714 57.895 0.00 0.00 45.30 4.18
4088 6794 1.733399 GGTGAACCGAGCTGTCGTC 60.733 63.158 0.00 0.00 45.30 4.20
4089 6795 2.338984 GGTGAACCGAGCTGTCGT 59.661 61.111 0.00 0.00 45.30 4.34
4090 6796 2.432628 GGGTGAACCGAGCTGTCG 60.433 66.667 0.00 0.00 46.39 4.35
4091 6797 2.047179 GGGGTGAACCGAGCTGTC 60.047 66.667 0.00 0.00 41.60 3.51
4092 6798 2.847234 TGGGGTGAACCGAGCTGT 60.847 61.111 0.00 0.00 41.60 4.40
4093 6799 2.046892 CTGGGGTGAACCGAGCTG 60.047 66.667 0.00 0.00 38.30 4.24
4094 6800 1.841556 TTCTGGGGTGAACCGAGCT 60.842 57.895 0.00 0.00 44.14 4.09
4095 6801 1.671379 GTTCTGGGGTGAACCGAGC 60.671 63.158 0.00 0.00 44.14 5.03
4096 6802 4.695560 GTTCTGGGGTGAACCGAG 57.304 61.111 0.00 0.00 45.71 4.63
4100 6806 1.618343 CATTTGGGTTCTGGGGTGAAC 59.382 52.381 0.00 0.00 43.88 3.18
4101 6807 1.482177 CCATTTGGGTTCTGGGGTGAA 60.482 52.381 0.00 0.00 0.00 3.18
4102 6808 0.114168 CCATTTGGGTTCTGGGGTGA 59.886 55.000 0.00 0.00 0.00 4.02
4103 6809 0.114168 TCCATTTGGGTTCTGGGGTG 59.886 55.000 0.00 0.00 38.11 4.61
4104 6810 1.092549 ATCCATTTGGGTTCTGGGGT 58.907 50.000 0.00 0.00 38.11 4.95
4105 6811 1.488390 CATCCATTTGGGTTCTGGGG 58.512 55.000 0.00 0.00 38.11 4.96
4106 6812 1.488390 CCATCCATTTGGGTTCTGGG 58.512 55.000 0.00 0.00 38.11 4.45
4107 6813 0.826062 GCCATCCATTTGGGTTCTGG 59.174 55.000 0.00 1.26 37.24 3.86
4108 6814 0.826062 GGCCATCCATTTGGGTTCTG 59.174 55.000 0.00 0.00 37.24 3.02
4109 6815 0.712380 AGGCCATCCATTTGGGTTCT 59.288 50.000 5.01 0.00 37.24 3.01
4110 6816 1.114627 GAGGCCATCCATTTGGGTTC 58.885 55.000 5.01 0.00 37.24 3.62
4111 6817 3.305181 GAGGCCATCCATTTGGGTT 57.695 52.632 5.01 0.00 37.24 4.11
4121 6827 2.044650 TGCAGCTTGGAGGCCATC 60.045 61.111 5.01 0.00 31.53 3.51
4122 6828 2.044252 CTGCAGCTTGGAGGCCAT 60.044 61.111 5.01 0.00 31.71 4.40
4127 6833 0.392729 CTTCTCCCTGCAGCTTGGAG 60.393 60.000 24.16 24.16 45.77 3.86
4128 6834 1.681666 CTTCTCCCTGCAGCTTGGA 59.318 57.895 8.66 9.17 0.00 3.53
4129 6835 4.315588 CTTCTCCCTGCAGCTTGG 57.684 61.111 8.66 4.45 0.00 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.