Multiple sequence alignment - TraesCS1B01G470700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1B01G470700 chr1B 100.000 2434 0 0 1 2434 678906789 678909222 0.000000e+00 4458.0
1 TraesCS1B01G470700 chr1B 93.683 839 30 7 831 1652 641213575 641212743 0.000000e+00 1234.0
2 TraesCS1B01G470700 chr1B 82.081 692 87 30 921 1589 678867728 678868405 7.600000e-155 556.0
3 TraesCS1B01G470700 chr1B 92.222 360 28 0 2074 2433 641211815 641211456 6.000000e-141 510.0
4 TraesCS1B01G470700 chr1B 96.104 231 7 1 33 261 641218816 641218586 2.280000e-100 375.0
5 TraesCS1B01G470700 chr1B 95.556 225 10 0 262 486 641213796 641213572 6.400000e-96 361.0
6 TraesCS1B01G470700 chr1B 88.987 227 15 1 1860 2076 641212213 641211987 3.080000e-69 272.0
7 TraesCS1B01G470700 chr1B 93.939 165 9 1 1649 1812 641212699 641212535 5.200000e-62 248.0
8 TraesCS1B01G470700 chr1B 100.000 33 0 0 1 33 674014983 674014951 7.270000e-06 62.1
9 TraesCS1B01G470700 chr1B 100.000 28 0 0 2407 2434 309119850 309119823 4.000000e-03 52.8
10 TraesCS1B01G470700 chr1D 95.484 465 15 2 1115 1577 487355261 487354801 0.000000e+00 737.0
11 TraesCS1B01G470700 chr1D 80.387 826 107 31 854 1651 487439760 487438962 5.840000e-161 577.0
12 TraesCS1B01G470700 chr1D 94.101 356 18 3 481 834 427591266 427590912 2.750000e-149 538.0
13 TraesCS1B01G470700 chr1D 94.034 352 18 3 485 834 470005609 470005259 4.610000e-147 531.0
14 TraesCS1B01G470700 chr1D 95.122 287 12 2 831 1116 487355680 487355395 3.690000e-123 451.0
15 TraesCS1B01G470700 chr1D 87.654 405 25 5 1864 2246 487354100 487353699 4.770000e-122 448.0
16 TraesCS1B01G470700 chr1D 94.372 231 9 2 33 261 487361428 487361200 3.850000e-93 351.0
17 TraesCS1B01G470700 chr1D 92.035 226 7 5 262 486 487355892 487355677 8.450000e-80 307.0
18 TraesCS1B01G470700 chr1D 88.043 184 9 6 50 220 467899511 467899694 3.170000e-49 206.0
19 TraesCS1B01G470700 chr1D 92.537 67 5 0 2336 2402 487347939 487347873 1.990000e-16 97.1
20 TraesCS1B01G470700 chr1D 83.333 102 6 4 2242 2343 487353098 487353008 1.550000e-12 84.2
21 TraesCS1B01G470700 chr5D 94.334 353 17 3 484 834 243456848 243456497 2.750000e-149 538.0
22 TraesCS1B01G470700 chr1A 94.334 353 17 3 484 834 147500408 147500057 2.750000e-149 538.0
23 TraesCS1B01G470700 chr1A 84.393 519 57 17 915 1411 585391596 585391080 2.810000e-134 488.0
24 TraesCS1B01G470700 chr1A 82.288 271 36 7 848 1107 585452511 585452780 8.760000e-55 224.0
25 TraesCS1B01G470700 chr1A 87.200 125 10 3 138 258 186728032 186727910 1.170000e-28 137.0
26 TraesCS1B01G470700 chr7D 94.318 352 17 3 485 834 503165828 503165478 9.900000e-149 536.0
27 TraesCS1B01G470700 chr7D 94.034 352 17 4 485 834 437369027 437368678 4.610000e-147 531.0
28 TraesCS1B01G470700 chr7D 84.314 102 15 1 354 454 539997378 539997479 5.540000e-17 99.0
29 TraesCS1B01G470700 chr7D 93.333 45 2 1 262 306 634437232 634437275 5.620000e-07 65.8
30 TraesCS1B01G470700 chr7D 97.297 37 1 0 1 37 98381595 98381631 2.020000e-06 63.9
31 TraesCS1B01G470700 chr6D 94.051 353 18 3 484 834 352086747 352086396 1.280000e-147 532.0
32 TraesCS1B01G470700 chr6D 95.238 84 4 0 262 345 70229 70312 1.520000e-27 134.0
33 TraesCS1B01G470700 chr4D 94.034 352 18 3 482 831 462199085 462199435 4.610000e-147 531.0
34 TraesCS1B01G470700 chr4D 82.653 98 7 8 263 352 52781011 52780916 7.220000e-11 78.7
35 TraesCS1B01G470700 chr3D 94.034 352 18 3 485 834 609689682 609689332 4.610000e-147 531.0
36 TraesCS1B01G470700 chr6A 87.552 241 17 5 33 260 63092402 63092642 1.430000e-67 267.0
37 TraesCS1B01G470700 chrUn 87.273 220 15 6 54 260 320011999 320011780 3.130000e-59 239.0
38 TraesCS1B01G470700 chrUn 87.273 220 15 6 54 260 322841776 322841557 3.130000e-59 239.0
39 TraesCS1B01G470700 chrUn 85.477 241 22 6 33 260 346199712 346199952 3.130000e-59 239.0
40 TraesCS1B01G470700 chrUn 85.477 241 22 6 33 260 367263131 367263371 3.130000e-59 239.0
41 TraesCS1B01G470700 chrUn 73.761 545 103 25 915 1449 302757940 302757426 6.920000e-41 178.0
42 TraesCS1B01G470700 chr3A 85.477 241 22 6 33 260 730427399 730427639 3.130000e-59 239.0
43 TraesCS1B01G470700 chr6B 88.043 184 9 6 50 220 243233473 243233656 3.170000e-49 206.0
44 TraesCS1B01G470700 chr6B 86.413 184 12 6 50 220 34162208 34162391 3.190000e-44 189.0
45 TraesCS1B01G470700 chr6B 100.000 33 0 0 1 33 31244919 31244951 7.270000e-06 62.1
46 TraesCS1B01G470700 chr2B 86.631 187 12 5 50 223 793822553 793822367 6.870000e-46 195.0
47 TraesCS1B01G470700 chr2B 93.333 45 3 0 262 306 799589023 799588979 1.560000e-07 67.6
48 TraesCS1B01G470700 chr5B 87.407 135 10 5 129 258 25812658 25812526 5.420000e-32 148.0
49 TraesCS1B01G470700 chr7B 86.458 96 12 1 360 454 583083387 583083482 1.190000e-18 104.0
50 TraesCS1B01G470700 chr7B 100.000 32 0 0 1 32 532214059 532214090 2.610000e-05 60.2
51 TraesCS1B01G470700 chr7B 100.000 32 0 0 4 35 742509552 742509521 2.610000e-05 60.2
52 TraesCS1B01G470700 chr4B 97.727 44 0 1 263 306 77666087 77666045 9.330000e-10 75.0
53 TraesCS1B01G470700 chr4A 93.333 45 3 0 262 306 645259359 645259403 1.560000e-07 67.6
54 TraesCS1B01G470700 chr4A 95.000 40 2 0 263 302 544031072 544031111 2.020000e-06 63.9
55 TraesCS1B01G470700 chr4A 100.000 33 0 0 1 33 698520965 698520933 7.270000e-06 62.1
56 TraesCS1B01G470700 chr2D 100.000 33 0 0 1 33 632248610 632248578 7.270000e-06 62.1
57 TraesCS1B01G470700 chr2D 94.595 37 1 1 1 37 649382153 649382188 3.380000e-04 56.5
58 TraesCS1B01G470700 chr2A 100.000 33 0 0 1 33 10832346 10832378 7.270000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1B01G470700 chr1B 678906789 678909222 2433 False 4458.00 4458 100.0000 1 2434 1 chr1B.!!$F2 2433
1 TraesCS1B01G470700 chr1B 678867728 678868405 677 False 556.00 556 82.0810 921 1589 1 chr1B.!!$F1 668
2 TraesCS1B01G470700 chr1B 641211456 641213796 2340 True 525.00 1234 92.8774 262 2433 5 chr1B.!!$R4 2171
3 TraesCS1B01G470700 chr1D 487438962 487439760 798 True 577.00 577 80.3870 854 1651 1 chr1D.!!$R5 797
4 TraesCS1B01G470700 chr1D 487353008 487355892 2884 True 405.44 737 90.7256 262 2343 5 chr1D.!!$R6 2081
5 TraesCS1B01G470700 chr1A 585391080 585391596 516 True 488.00 488 84.3930 915 1411 1 chr1A.!!$R3 496

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
708 710 0.033109 GGGATTGGAGGGTTTGGAGG 60.033 60.0 0.0 0.0 0.0 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1810 2179 0.171007 GCGTCCATGGTGATTGGTTG 59.829 55.0 12.58 0.0 35.64 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.454260 GTGTCTCATATTTGACCCTTTTTCT 57.546 36.000 3.31 0.00 32.67 2.52
25 26 8.561738 GTGTCTCATATTTGACCCTTTTTCTA 57.438 34.615 3.31 0.00 32.67 2.10
26 27 8.451748 GTGTCTCATATTTGACCCTTTTTCTAC 58.548 37.037 3.31 0.00 32.67 2.59
27 28 8.383175 TGTCTCATATTTGACCCTTTTTCTACT 58.617 33.333 3.31 0.00 32.67 2.57
28 29 9.886132 GTCTCATATTTGACCCTTTTTCTACTA 57.114 33.333 0.00 0.00 0.00 1.82
30 31 9.892130 CTCATATTTGACCCTTTTTCTACTAGT 57.108 33.333 0.00 0.00 0.00 2.57
31 32 9.667107 TCATATTTGACCCTTTTTCTACTAGTG 57.333 33.333 5.39 0.00 0.00 2.74
32 33 9.667107 CATATTTGACCCTTTTTCTACTAGTGA 57.333 33.333 5.39 0.00 0.00 3.41
33 34 7.981102 ATTTGACCCTTTTTCTACTAGTGAC 57.019 36.000 5.39 0.00 0.00 3.67
34 35 6.742559 TTGACCCTTTTTCTACTAGTGACT 57.257 37.500 5.39 0.00 0.00 3.41
35 36 6.742559 TGACCCTTTTTCTACTAGTGACTT 57.257 37.500 5.39 0.00 0.00 3.01
36 37 6.756221 TGACCCTTTTTCTACTAGTGACTTC 58.244 40.000 5.39 0.00 0.00 3.01
37 38 6.111669 ACCCTTTTTCTACTAGTGACTTCC 57.888 41.667 5.39 0.00 0.00 3.46
38 39 5.012871 ACCCTTTTTCTACTAGTGACTTCCC 59.987 44.000 5.39 0.00 0.00 3.97
39 40 5.489249 CCTTTTTCTACTAGTGACTTCCCC 58.511 45.833 5.39 0.00 0.00 4.81
40 41 5.012768 CCTTTTTCTACTAGTGACTTCCCCA 59.987 44.000 5.39 0.00 0.00 4.96
41 42 5.479124 TTTTCTACTAGTGACTTCCCCAC 57.521 43.478 5.39 0.00 34.89 4.61
42 43 3.820195 TCTACTAGTGACTTCCCCACA 57.180 47.619 5.39 0.00 37.01 4.17
43 44 4.122337 TCTACTAGTGACTTCCCCACAA 57.878 45.455 5.39 0.00 37.01 3.33
44 45 3.830755 TCTACTAGTGACTTCCCCACAAC 59.169 47.826 5.39 0.00 37.01 3.32
45 46 1.697982 ACTAGTGACTTCCCCACAACC 59.302 52.381 0.00 0.00 37.01 3.77
46 47 1.003233 CTAGTGACTTCCCCACAACCC 59.997 57.143 0.00 0.00 37.01 4.11
47 48 0.991355 AGTGACTTCCCCACAACCCA 60.991 55.000 0.00 0.00 37.01 4.51
48 49 0.822121 GTGACTTCCCCACAACCCAC 60.822 60.000 0.00 0.00 34.81 4.61
49 50 1.228459 GACTTCCCCACAACCCACC 60.228 63.158 0.00 0.00 0.00 4.61
50 51 2.002018 GACTTCCCCACAACCCACCA 62.002 60.000 0.00 0.00 0.00 4.17
51 52 1.228552 CTTCCCCACAACCCACCAG 60.229 63.158 0.00 0.00 0.00 4.00
52 53 1.698116 TTCCCCACAACCCACCAGA 60.698 57.895 0.00 0.00 0.00 3.86
53 54 1.071314 TTCCCCACAACCCACCAGAT 61.071 55.000 0.00 0.00 0.00 2.90
54 55 0.178858 TCCCCACAACCCACCAGATA 60.179 55.000 0.00 0.00 0.00 1.98
55 56 0.034477 CCCCACAACCCACCAGATAC 60.034 60.000 0.00 0.00 0.00 2.24
56 57 0.695924 CCCACAACCCACCAGATACA 59.304 55.000 0.00 0.00 0.00 2.29
57 58 1.284785 CCCACAACCCACCAGATACAT 59.715 52.381 0.00 0.00 0.00 2.29
58 59 2.368439 CCACAACCCACCAGATACATG 58.632 52.381 0.00 0.00 0.00 3.21
59 60 1.745087 CACAACCCACCAGATACATGC 59.255 52.381 0.00 0.00 0.00 4.06
60 61 1.354031 ACAACCCACCAGATACATGCA 59.646 47.619 0.00 0.00 0.00 3.96
61 62 2.019249 CAACCCACCAGATACATGCAG 58.981 52.381 0.00 0.00 0.00 4.41
62 63 1.583556 ACCCACCAGATACATGCAGA 58.416 50.000 0.00 0.00 0.00 4.26
63 64 2.130193 ACCCACCAGATACATGCAGAT 58.870 47.619 0.00 0.00 0.00 2.90
64 65 2.511218 ACCCACCAGATACATGCAGATT 59.489 45.455 0.00 0.00 0.00 2.40
65 66 3.053395 ACCCACCAGATACATGCAGATTT 60.053 43.478 0.00 0.00 0.00 2.17
66 67 3.317149 CCCACCAGATACATGCAGATTTG 59.683 47.826 0.00 0.00 0.00 2.32
67 68 3.949754 CCACCAGATACATGCAGATTTGT 59.050 43.478 0.00 0.00 0.00 2.83
68 69 4.036027 CCACCAGATACATGCAGATTTGTC 59.964 45.833 0.00 0.00 0.00 3.18
69 70 4.036027 CACCAGATACATGCAGATTTGTCC 59.964 45.833 0.00 0.00 0.00 4.02
70 71 4.080129 ACCAGATACATGCAGATTTGTCCT 60.080 41.667 0.00 0.00 0.00 3.85
71 72 4.885907 CCAGATACATGCAGATTTGTCCTT 59.114 41.667 0.00 0.00 0.00 3.36
72 73 5.359009 CCAGATACATGCAGATTTGTCCTTT 59.641 40.000 0.00 0.00 0.00 3.11
73 74 6.459298 CCAGATACATGCAGATTTGTCCTTTC 60.459 42.308 0.00 0.00 0.00 2.62
74 75 3.837213 ACATGCAGATTTGTCCTTTCG 57.163 42.857 0.00 0.00 0.00 3.46
75 76 3.149196 ACATGCAGATTTGTCCTTTCGT 58.851 40.909 0.00 0.00 0.00 3.85
76 77 3.189287 ACATGCAGATTTGTCCTTTCGTC 59.811 43.478 0.00 0.00 0.00 4.20
77 78 3.126001 TGCAGATTTGTCCTTTCGTCT 57.874 42.857 0.00 0.00 0.00 4.18
78 79 3.067106 TGCAGATTTGTCCTTTCGTCTC 58.933 45.455 0.00 0.00 0.00 3.36
79 80 3.244215 TGCAGATTTGTCCTTTCGTCTCT 60.244 43.478 0.00 0.00 0.00 3.10
80 81 3.369451 GCAGATTTGTCCTTTCGTCTCTC 59.631 47.826 0.00 0.00 0.00 3.20
81 82 4.560128 CAGATTTGTCCTTTCGTCTCTCA 58.440 43.478 0.00 0.00 0.00 3.27
82 83 4.387256 CAGATTTGTCCTTTCGTCTCTCAC 59.613 45.833 0.00 0.00 0.00 3.51
83 84 3.812156 TTTGTCCTTTCGTCTCTCACA 57.188 42.857 0.00 0.00 0.00 3.58
84 85 3.371102 TTGTCCTTTCGTCTCTCACAG 57.629 47.619 0.00 0.00 0.00 3.66
85 86 1.000163 TGTCCTTTCGTCTCTCACAGC 60.000 52.381 0.00 0.00 0.00 4.40
86 87 1.000163 GTCCTTTCGTCTCTCACAGCA 60.000 52.381 0.00 0.00 0.00 4.41
87 88 1.686587 TCCTTTCGTCTCTCACAGCAA 59.313 47.619 0.00 0.00 0.00 3.91
88 89 2.064762 CCTTTCGTCTCTCACAGCAAG 58.935 52.381 0.00 0.00 0.00 4.01
89 90 2.064762 CTTTCGTCTCTCACAGCAAGG 58.935 52.381 0.00 0.00 0.00 3.61
90 91 1.040646 TTCGTCTCTCACAGCAAGGT 58.959 50.000 0.00 0.00 0.00 3.50
91 92 0.315251 TCGTCTCTCACAGCAAGGTG 59.685 55.000 0.00 0.00 40.16 4.00
92 93 1.287730 CGTCTCTCACAGCAAGGTGC 61.288 60.000 0.00 0.00 45.46 5.01
106 107 5.778161 GCAAGGTGCATATAAACAAAACC 57.222 39.130 0.00 0.00 44.26 3.27
107 108 4.326009 GCAAGGTGCATATAAACAAAACCG 59.674 41.667 0.00 0.00 44.26 4.44
108 109 4.712122 AGGTGCATATAAACAAAACCGG 57.288 40.909 0.00 0.00 0.00 5.28
109 110 4.337145 AGGTGCATATAAACAAAACCGGA 58.663 39.130 9.46 0.00 0.00 5.14
110 111 4.398044 AGGTGCATATAAACAAAACCGGAG 59.602 41.667 9.46 0.00 0.00 4.63
111 112 4.396790 GGTGCATATAAACAAAACCGGAGA 59.603 41.667 9.46 0.00 0.00 3.71
112 113 5.448632 GGTGCATATAAACAAAACCGGAGAG 60.449 44.000 9.46 0.00 0.00 3.20
114 115 4.497507 GCATATAAACAAAACCGGAGAGGC 60.498 45.833 9.46 0.00 46.52 4.70
115 116 2.642154 TAAACAAAACCGGAGAGGCA 57.358 45.000 9.46 0.00 46.52 4.75
116 117 1.318576 AAACAAAACCGGAGAGGCAG 58.681 50.000 9.46 0.00 46.52 4.85
117 118 0.472471 AACAAAACCGGAGAGGCAGA 59.528 50.000 9.46 0.00 46.52 4.26
118 119 0.250338 ACAAAACCGGAGAGGCAGAC 60.250 55.000 9.46 0.00 46.52 3.51
119 120 0.250295 CAAAACCGGAGAGGCAGACA 60.250 55.000 9.46 0.00 46.52 3.41
120 121 0.472471 AAAACCGGAGAGGCAGACAA 59.528 50.000 9.46 0.00 46.52 3.18
121 122 0.250338 AAACCGGAGAGGCAGACAAC 60.250 55.000 9.46 0.00 46.52 3.32
122 123 2.113243 AACCGGAGAGGCAGACAACC 62.113 60.000 9.46 0.00 46.52 3.77
123 124 2.125912 CGGAGAGGCAGACAACCG 60.126 66.667 0.00 0.00 34.77 4.44
124 125 2.932234 CGGAGAGGCAGACAACCGT 61.932 63.158 0.00 0.00 36.38 4.83
125 126 1.592400 CGGAGAGGCAGACAACCGTA 61.592 60.000 0.00 0.00 36.38 4.02
126 127 0.108756 GGAGAGGCAGACAACCGTAC 60.109 60.000 0.00 0.00 0.00 3.67
127 128 0.601558 GAGAGGCAGACAACCGTACA 59.398 55.000 0.00 0.00 0.00 2.90
128 129 0.603569 AGAGGCAGACAACCGTACAG 59.396 55.000 0.00 0.00 0.00 2.74
130 131 2.033194 GGCAGACAACCGTACAGGC 61.033 63.158 4.00 0.00 46.52 4.85
131 132 1.301401 GCAGACAACCGTACAGGCA 60.301 57.895 4.00 0.00 46.52 4.75
132 133 1.291877 GCAGACAACCGTACAGGCAG 61.292 60.000 4.00 0.62 46.52 4.85
133 134 1.004918 AGACAACCGTACAGGCAGC 60.005 57.895 4.00 0.00 46.52 5.25
134 135 2.357034 ACAACCGTACAGGCAGCG 60.357 61.111 4.00 0.00 46.52 5.18
152 153 2.356278 GGCACCCTCCAGCATGAA 59.644 61.111 0.00 0.00 39.69 2.57
153 154 1.751927 GGCACCCTCCAGCATGAAG 60.752 63.158 0.00 0.00 39.69 3.02
154 155 1.751927 GCACCCTCCAGCATGAAGG 60.752 63.158 0.00 0.00 39.69 3.46
155 156 1.687612 CACCCTCCAGCATGAAGGT 59.312 57.895 0.00 0.00 39.69 3.50
156 157 0.038744 CACCCTCCAGCATGAAGGTT 59.961 55.000 0.00 0.00 39.69 3.50
157 158 0.779997 ACCCTCCAGCATGAAGGTTT 59.220 50.000 0.00 0.00 39.69 3.27
158 159 1.180029 CCCTCCAGCATGAAGGTTTG 58.820 55.000 0.00 0.00 39.69 2.93
159 160 1.548582 CCCTCCAGCATGAAGGTTTGT 60.549 52.381 0.00 0.00 39.69 2.83
160 161 1.815003 CCTCCAGCATGAAGGTTTGTC 59.185 52.381 0.00 0.00 39.69 3.18
161 162 1.815003 CTCCAGCATGAAGGTTTGTCC 59.185 52.381 0.00 0.00 39.69 4.02
162 163 0.890683 CCAGCATGAAGGTTTGTCCC 59.109 55.000 0.00 0.00 39.69 4.46
163 164 1.548582 CCAGCATGAAGGTTTGTCCCT 60.549 52.381 0.00 0.00 39.69 4.20
171 172 1.363246 AGGTTTGTCCCTTCCTCTCC 58.637 55.000 0.00 0.00 36.75 3.71
172 173 1.132365 AGGTTTGTCCCTTCCTCTCCT 60.132 52.381 0.00 0.00 36.75 3.69
173 174 1.279558 GGTTTGTCCCTTCCTCTCCTC 59.720 57.143 0.00 0.00 0.00 3.71
174 175 2.261729 GTTTGTCCCTTCCTCTCCTCT 58.738 52.381 0.00 0.00 0.00 3.69
175 176 2.235155 GTTTGTCCCTTCCTCTCCTCTC 59.765 54.545 0.00 0.00 0.00 3.20
176 177 0.033991 TGTCCCTTCCTCTCCTCTCG 60.034 60.000 0.00 0.00 0.00 4.04
177 178 0.753848 GTCCCTTCCTCTCCTCTCGG 60.754 65.000 0.00 0.00 0.00 4.63
178 179 2.131067 CCCTTCCTCTCCTCTCGGC 61.131 68.421 0.00 0.00 0.00 5.54
179 180 1.380515 CCTTCCTCTCCTCTCGGCA 60.381 63.158 0.00 0.00 0.00 5.69
180 181 1.671901 CCTTCCTCTCCTCTCGGCAC 61.672 65.000 0.00 0.00 0.00 5.01
181 182 0.682855 CTTCCTCTCCTCTCGGCACT 60.683 60.000 0.00 0.00 0.00 4.40
182 183 0.624254 TTCCTCTCCTCTCGGCACTA 59.376 55.000 0.00 0.00 0.00 2.74
183 184 0.181587 TCCTCTCCTCTCGGCACTAG 59.818 60.000 0.00 0.00 0.00 2.57
184 185 0.821711 CCTCTCCTCTCGGCACTAGG 60.822 65.000 0.00 0.00 0.00 3.02
185 186 0.106918 CTCTCCTCTCGGCACTAGGT 60.107 60.000 0.00 0.00 0.00 3.08
186 187 0.394488 TCTCCTCTCGGCACTAGGTG 60.394 60.000 0.00 0.00 36.51 4.00
207 208 3.963676 GTGCATGCACACAAGGAAA 57.036 47.368 39.12 4.32 45.53 3.13
208 209 2.222007 GTGCATGCACACAAGGAAAA 57.778 45.000 39.12 3.75 45.53 2.29
209 210 2.129607 GTGCATGCACACAAGGAAAAG 58.870 47.619 39.12 0.00 45.53 2.27
210 211 1.068895 TGCATGCACACAAGGAAAAGG 59.931 47.619 18.46 0.00 0.00 3.11
211 212 1.340889 GCATGCACACAAGGAAAAGGA 59.659 47.619 14.21 0.00 0.00 3.36
212 213 2.608752 GCATGCACACAAGGAAAAGGAG 60.609 50.000 14.21 0.00 0.00 3.69
213 214 2.727123 TGCACACAAGGAAAAGGAGA 57.273 45.000 0.00 0.00 0.00 3.71
214 215 2.575532 TGCACACAAGGAAAAGGAGAG 58.424 47.619 0.00 0.00 0.00 3.20
215 216 1.882623 GCACACAAGGAAAAGGAGAGG 59.117 52.381 0.00 0.00 0.00 3.69
216 217 1.882623 CACACAAGGAAAAGGAGAGGC 59.117 52.381 0.00 0.00 0.00 4.70
217 218 1.494721 ACACAAGGAAAAGGAGAGGCA 59.505 47.619 0.00 0.00 0.00 4.75
218 219 2.157738 CACAAGGAAAAGGAGAGGCAG 58.842 52.381 0.00 0.00 0.00 4.85
219 220 1.074566 ACAAGGAAAAGGAGAGGCAGG 59.925 52.381 0.00 0.00 0.00 4.85
220 221 1.074566 CAAGGAAAAGGAGAGGCAGGT 59.925 52.381 0.00 0.00 0.00 4.00
221 222 0.695347 AGGAAAAGGAGAGGCAGGTG 59.305 55.000 0.00 0.00 0.00 4.00
222 223 0.693049 GGAAAAGGAGAGGCAGGTGA 59.307 55.000 0.00 0.00 0.00 4.02
223 224 1.611936 GGAAAAGGAGAGGCAGGTGAC 60.612 57.143 0.00 0.00 0.00 3.67
224 225 0.402121 AAAAGGAGAGGCAGGTGACC 59.598 55.000 0.00 0.00 0.00 4.02
225 226 0.768221 AAAGGAGAGGCAGGTGACCA 60.768 55.000 3.63 0.00 0.00 4.02
226 227 0.548682 AAGGAGAGGCAGGTGACCAT 60.549 55.000 3.63 0.00 0.00 3.55
227 228 0.980231 AGGAGAGGCAGGTGACCATC 60.980 60.000 3.63 0.00 0.00 3.51
228 229 1.142748 GAGAGGCAGGTGACCATCG 59.857 63.158 3.63 0.00 0.00 3.84
229 230 2.187946 GAGGCAGGTGACCATCGG 59.812 66.667 3.63 0.00 0.00 4.18
230 231 3.391665 GAGGCAGGTGACCATCGGG 62.392 68.421 3.63 0.00 41.29 5.14
232 233 4.101448 GCAGGTGACCATCGGGCT 62.101 66.667 3.63 0.00 37.90 5.19
233 234 2.124983 CAGGTGACCATCGGGCTG 60.125 66.667 3.63 0.00 37.90 4.85
234 235 4.101448 AGGTGACCATCGGGCTGC 62.101 66.667 3.63 0.00 37.90 5.25
238 239 4.899239 GACCATCGGGCTGCCGAG 62.899 72.222 13.40 9.54 45.45 4.63
241 242 3.536917 CATCGGGCTGCCGAGGTA 61.537 66.667 13.40 0.00 45.45 3.08
242 243 2.762459 ATCGGGCTGCCGAGGTAA 60.762 61.111 13.40 0.00 45.45 2.85
243 244 2.363975 ATCGGGCTGCCGAGGTAAA 61.364 57.895 13.40 0.00 45.45 2.01
244 245 2.588856 ATCGGGCTGCCGAGGTAAAC 62.589 60.000 13.40 0.00 45.45 2.01
245 246 2.818274 GGGCTGCCGAGGTAAACG 60.818 66.667 13.40 0.00 0.00 3.60
246 247 2.263540 GGCTGCCGAGGTAAACGA 59.736 61.111 1.35 0.00 0.00 3.85
247 248 2.098831 GGCTGCCGAGGTAAACGAC 61.099 63.158 1.35 0.00 0.00 4.34
259 260 3.855689 GTAAACGACCAGCTACCTACA 57.144 47.619 0.00 0.00 0.00 2.74
260 261 3.767278 GTAAACGACCAGCTACCTACAG 58.233 50.000 0.00 0.00 0.00 2.74
322 324 9.723601 TTATTTGTTAACCTTTGGTACGTCTAT 57.276 29.630 2.48 0.00 33.12 1.98
442 444 7.913297 TGACAAAAGTAATTTTGAGAAACTCCG 59.087 33.333 29.23 4.78 42.79 4.63
443 445 7.200455 ACAAAAGTAATTTTGAGAAACTCCGG 58.800 34.615 29.23 0.00 42.79 5.14
484 486 7.410991 TGCATGAGATAAGCCCTATACTACTA 58.589 38.462 0.00 0.00 0.00 1.82
485 487 7.893833 TGCATGAGATAAGCCCTATACTACTAA 59.106 37.037 0.00 0.00 0.00 2.24
486 488 8.410141 GCATGAGATAAGCCCTATACTACTAAG 58.590 40.741 0.00 0.00 0.00 2.18
487 489 9.688091 CATGAGATAAGCCCTATACTACTAAGA 57.312 37.037 0.00 0.00 0.00 2.10
488 490 9.914834 ATGAGATAAGCCCTATACTACTAAGAG 57.085 37.037 0.00 0.00 0.00 2.85
489 491 8.330247 TGAGATAAGCCCTATACTACTAAGAGG 58.670 40.741 0.00 0.00 0.00 3.69
494 496 5.000570 CCCTATACTACTAAGAGGGTGCT 57.999 47.826 0.00 0.00 41.80 4.40
495 497 5.395611 CCCTATACTACTAAGAGGGTGCTT 58.604 45.833 0.00 0.00 41.80 3.91
496 498 5.244178 CCCTATACTACTAAGAGGGTGCTTG 59.756 48.000 0.00 0.00 41.80 4.01
497 499 5.244178 CCTATACTACTAAGAGGGTGCTTGG 59.756 48.000 0.00 0.00 33.18 3.61
498 500 3.185880 ACTACTAAGAGGGTGCTTGGA 57.814 47.619 0.00 0.00 31.62 3.53
499 501 3.725634 ACTACTAAGAGGGTGCTTGGAT 58.274 45.455 0.00 0.00 31.62 3.41
500 502 3.707102 ACTACTAAGAGGGTGCTTGGATC 59.293 47.826 0.00 0.00 31.62 3.36
501 503 1.840635 ACTAAGAGGGTGCTTGGATCC 59.159 52.381 4.20 4.20 31.62 3.36
502 504 1.839994 CTAAGAGGGTGCTTGGATCCA 59.160 52.381 11.44 11.44 0.00 3.41
503 505 1.075601 AAGAGGGTGCTTGGATCCAA 58.924 50.000 25.53 25.53 0.00 3.53
546 548 9.654663 TGACTAAAAATAGTCTCTTTAAGAGGC 57.345 33.333 17.87 17.87 46.94 4.70
556 558 7.964604 GTCTCTTTAAGAGGCTAAAGTTTCA 57.035 36.000 18.21 0.00 43.38 2.69
557 559 8.379457 GTCTCTTTAAGAGGCTAAAGTTTCAA 57.621 34.615 18.21 0.00 43.38 2.69
558 560 8.499967 GTCTCTTTAAGAGGCTAAAGTTTCAAG 58.500 37.037 18.21 0.00 43.38 3.02
559 561 7.173390 TCTCTTTAAGAGGCTAAAGTTTCAAGC 59.827 37.037 20.29 2.28 42.54 4.01
560 562 6.770785 TCTTTAAGAGGCTAAAGTTTCAAGCA 59.229 34.615 11.51 0.00 39.12 3.91
561 563 4.837896 AAGAGGCTAAAGTTTCAAGCAC 57.162 40.909 11.51 5.94 38.01 4.40
562 564 3.149981 AGAGGCTAAAGTTTCAAGCACC 58.850 45.455 11.51 3.82 38.01 5.01
563 565 3.149981 GAGGCTAAAGTTTCAAGCACCT 58.850 45.455 11.51 1.91 38.01 4.00
564 566 3.149981 AGGCTAAAGTTTCAAGCACCTC 58.850 45.455 11.51 0.00 38.01 3.85
565 567 3.149981 GGCTAAAGTTTCAAGCACCTCT 58.850 45.455 11.51 0.00 38.01 3.69
566 568 3.057946 GGCTAAAGTTTCAAGCACCTCTG 60.058 47.826 11.51 0.00 38.01 3.35
567 569 3.815401 GCTAAAGTTTCAAGCACCTCTGA 59.185 43.478 5.64 0.00 36.26 3.27
568 570 4.319839 GCTAAAGTTTCAAGCACCTCTGAC 60.320 45.833 5.64 0.00 36.26 3.51
569 571 3.567478 AAGTTTCAAGCACCTCTGACT 57.433 42.857 0.00 0.00 0.00 3.41
570 572 4.689612 AAGTTTCAAGCACCTCTGACTA 57.310 40.909 0.00 0.00 0.00 2.59
571 573 4.689612 AGTTTCAAGCACCTCTGACTAA 57.310 40.909 0.00 0.00 0.00 2.24
572 574 5.036117 AGTTTCAAGCACCTCTGACTAAA 57.964 39.130 0.00 0.00 0.00 1.85
573 575 5.059833 AGTTTCAAGCACCTCTGACTAAAG 58.940 41.667 0.00 0.00 0.00 1.85
574 576 4.955811 TTCAAGCACCTCTGACTAAAGA 57.044 40.909 0.00 0.00 0.00 2.52
575 577 4.527509 TCAAGCACCTCTGACTAAAGAG 57.472 45.455 0.00 0.00 42.90 2.85
584 586 5.422214 CTCTGACTAAAGAGGGGCTAAAA 57.578 43.478 0.00 0.00 40.11 1.52
585 587 5.161943 TCTGACTAAAGAGGGGCTAAAAC 57.838 43.478 0.00 0.00 0.00 2.43
586 588 4.844655 TCTGACTAAAGAGGGGCTAAAACT 59.155 41.667 0.00 0.00 0.00 2.66
587 589 4.906618 TGACTAAAGAGGGGCTAAAACTG 58.093 43.478 0.00 0.00 0.00 3.16
588 590 4.262617 GACTAAAGAGGGGCTAAAACTGG 58.737 47.826 0.00 0.00 0.00 4.00
589 591 3.656264 ACTAAAGAGGGGCTAAAACTGGT 59.344 43.478 0.00 0.00 0.00 4.00
590 592 2.881111 AAGAGGGGCTAAAACTGGTC 57.119 50.000 0.00 0.00 0.00 4.02
591 593 2.046280 AGAGGGGCTAAAACTGGTCT 57.954 50.000 0.00 0.00 0.00 3.85
592 594 2.349445 AGAGGGGCTAAAACTGGTCTT 58.651 47.619 0.00 0.00 0.00 3.01
593 595 2.040412 AGAGGGGCTAAAACTGGTCTTG 59.960 50.000 0.00 0.00 0.00 3.02
594 596 2.039879 GAGGGGCTAAAACTGGTCTTGA 59.960 50.000 0.00 0.00 0.00 3.02
595 597 2.040412 AGGGGCTAAAACTGGTCTTGAG 59.960 50.000 0.00 0.00 0.00 3.02
596 598 2.039879 GGGGCTAAAACTGGTCTTGAGA 59.960 50.000 0.00 0.00 0.00 3.27
597 599 3.075148 GGGCTAAAACTGGTCTTGAGAC 58.925 50.000 2.51 2.51 44.04 3.36
598 600 3.244596 GGGCTAAAACTGGTCTTGAGACT 60.245 47.826 10.68 0.00 44.20 3.24
599 601 4.020485 GGGCTAAAACTGGTCTTGAGACTA 60.020 45.833 10.68 4.22 44.20 2.59
600 602 5.512576 GGGCTAAAACTGGTCTTGAGACTAA 60.513 44.000 10.68 0.14 44.20 2.24
601 603 6.174049 GGCTAAAACTGGTCTTGAGACTAAT 58.826 40.000 10.68 0.00 44.20 1.73
602 604 6.655425 GGCTAAAACTGGTCTTGAGACTAATT 59.345 38.462 10.68 0.00 44.20 1.40
603 605 7.175119 GGCTAAAACTGGTCTTGAGACTAATTT 59.825 37.037 10.68 4.83 44.20 1.82
604 606 8.568794 GCTAAAACTGGTCTTGAGACTAATTTT 58.431 33.333 16.76 16.76 43.60 1.82
626 628 4.961440 TTTAGTCAGAGGTACCCCTACT 57.039 45.455 8.74 9.89 42.86 2.57
627 629 6.407320 TTTTAGTCAGAGGTACCCCTACTA 57.593 41.667 8.74 8.90 42.86 1.82
628 630 6.407320 TTTAGTCAGAGGTACCCCTACTAA 57.593 41.667 8.74 14.08 42.86 2.24
629 631 4.961440 AGTCAGAGGTACCCCTACTAAA 57.039 45.455 8.74 0.00 42.86 1.85
630 632 5.280998 AGTCAGAGGTACCCCTACTAAAA 57.719 43.478 8.74 0.00 42.86 1.52
631 633 5.851418 AGTCAGAGGTACCCCTACTAAAAT 58.149 41.667 8.74 0.00 42.86 1.82
632 634 5.661759 AGTCAGAGGTACCCCTACTAAAATG 59.338 44.000 8.74 0.00 42.86 2.32
633 635 5.424573 GTCAGAGGTACCCCTACTAAAATGT 59.575 44.000 8.74 0.00 42.86 2.71
634 636 6.027482 TCAGAGGTACCCCTACTAAAATGTT 58.973 40.000 8.74 0.00 42.86 2.71
635 637 6.070424 TCAGAGGTACCCCTACTAAAATGTTG 60.070 42.308 8.74 0.00 42.86 3.33
636 638 6.027482 AGAGGTACCCCTACTAAAATGTTGA 58.973 40.000 8.74 0.00 42.86 3.18
637 639 6.677076 AGAGGTACCCCTACTAAAATGTTGAT 59.323 38.462 8.74 0.00 42.86 2.57
638 640 7.184022 AGAGGTACCCCTACTAAAATGTTGATT 59.816 37.037 8.74 0.00 42.86 2.57
639 641 8.396619 AGGTACCCCTACTAAAATGTTGATTA 57.603 34.615 8.74 0.00 40.19 1.75
640 642 8.491958 AGGTACCCCTACTAAAATGTTGATTAG 58.508 37.037 8.74 0.00 40.19 1.73
641 643 8.270030 GGTACCCCTACTAAAATGTTGATTAGT 58.730 37.037 0.00 3.93 43.05 2.24
642 644 9.322773 GTACCCCTACTAAAATGTTGATTAGTC 57.677 37.037 1.78 0.00 40.53 2.59
643 645 7.344134 ACCCCTACTAAAATGTTGATTAGTCC 58.656 38.462 1.78 0.00 40.53 3.85
644 646 7.184022 ACCCCTACTAAAATGTTGATTAGTCCT 59.816 37.037 1.78 0.00 40.53 3.85
645 647 7.715686 CCCCTACTAAAATGTTGATTAGTCCTC 59.284 40.741 1.78 0.00 40.53 3.71
646 648 8.487028 CCCTACTAAAATGTTGATTAGTCCTCT 58.513 37.037 1.78 0.00 40.53 3.69
647 649 9.535878 CCTACTAAAATGTTGATTAGTCCTCTC 57.464 37.037 1.78 0.00 40.53 3.20
650 652 9.041354 ACTAAAATGTTGATTAGTCCTCTCTCT 57.959 33.333 0.00 0.00 37.73 3.10
651 653 9.528018 CTAAAATGTTGATTAGTCCTCTCTCTC 57.472 37.037 0.00 0.00 0.00 3.20
652 654 6.478512 AATGTTGATTAGTCCTCTCTCTCC 57.521 41.667 0.00 0.00 0.00 3.71
653 655 5.199982 TGTTGATTAGTCCTCTCTCTCCT 57.800 43.478 0.00 0.00 0.00 3.69
654 656 5.197451 TGTTGATTAGTCCTCTCTCTCCTC 58.803 45.833 0.00 0.00 0.00 3.71
655 657 5.197451 GTTGATTAGTCCTCTCTCTCCTCA 58.803 45.833 0.00 0.00 0.00 3.86
656 658 5.661503 TGATTAGTCCTCTCTCTCCTCAT 57.338 43.478 0.00 0.00 0.00 2.90
657 659 6.024563 TGATTAGTCCTCTCTCTCCTCATT 57.975 41.667 0.00 0.00 0.00 2.57
658 660 6.439487 TGATTAGTCCTCTCTCTCCTCATTT 58.561 40.000 0.00 0.00 0.00 2.32
659 661 7.587258 TGATTAGTCCTCTCTCTCCTCATTTA 58.413 38.462 0.00 0.00 0.00 1.40
660 662 8.061920 TGATTAGTCCTCTCTCTCCTCATTTAA 58.938 37.037 0.00 0.00 0.00 1.52
661 663 7.648039 TTAGTCCTCTCTCTCCTCATTTAAC 57.352 40.000 0.00 0.00 0.00 2.01
662 664 5.837829 AGTCCTCTCTCTCCTCATTTAACT 58.162 41.667 0.00 0.00 0.00 2.24
663 665 5.891551 AGTCCTCTCTCTCCTCATTTAACTC 59.108 44.000 0.00 0.00 0.00 3.01
664 666 5.068591 GTCCTCTCTCTCCTCATTTAACTCC 59.931 48.000 0.00 0.00 0.00 3.85
665 667 5.043732 TCCTCTCTCTCCTCATTTAACTCCT 60.044 44.000 0.00 0.00 0.00 3.69
666 668 5.301805 CCTCTCTCTCCTCATTTAACTCCTC 59.698 48.000 0.00 0.00 0.00 3.71
667 669 6.086011 TCTCTCTCCTCATTTAACTCCTCT 57.914 41.667 0.00 0.00 0.00 3.69
668 670 6.126409 TCTCTCTCCTCATTTAACTCCTCTC 58.874 44.000 0.00 0.00 0.00 3.20
669 671 5.205056 TCTCTCCTCATTTAACTCCTCTCC 58.795 45.833 0.00 0.00 0.00 3.71
670 672 5.043732 TCTCTCCTCATTTAACTCCTCTCCT 60.044 44.000 0.00 0.00 0.00 3.69
671 673 5.594777 TCTCCTCATTTAACTCCTCTCCTT 58.405 41.667 0.00 0.00 0.00 3.36
672 674 6.026186 TCTCCTCATTTAACTCCTCTCCTTT 58.974 40.000 0.00 0.00 0.00 3.11
673 675 7.189794 TCTCCTCATTTAACTCCTCTCCTTTA 58.810 38.462 0.00 0.00 0.00 1.85
674 676 7.678598 TCTCCTCATTTAACTCCTCTCCTTTAA 59.321 37.037 0.00 0.00 0.00 1.52
675 677 7.621796 TCCTCATTTAACTCCTCTCCTTTAAC 58.378 38.462 0.00 0.00 0.00 2.01
676 678 7.236847 TCCTCATTTAACTCCTCTCCTTTAACA 59.763 37.037 0.00 0.00 0.00 2.41
677 679 7.883311 CCTCATTTAACTCCTCTCCTTTAACAA 59.117 37.037 0.00 0.00 0.00 2.83
678 680 8.617290 TCATTTAACTCCTCTCCTTTAACAAC 57.383 34.615 0.00 0.00 0.00 3.32
679 681 7.386848 TCATTTAACTCCTCTCCTTTAACAACG 59.613 37.037 0.00 0.00 0.00 4.10
680 682 3.679824 ACTCCTCTCCTTTAACAACGG 57.320 47.619 0.00 0.00 0.00 4.44
681 683 3.236896 ACTCCTCTCCTTTAACAACGGA 58.763 45.455 0.00 0.00 0.00 4.69
682 684 3.006644 ACTCCTCTCCTTTAACAACGGAC 59.993 47.826 0.00 0.00 0.00 4.79
683 685 2.029649 TCCTCTCCTTTAACAACGGACG 60.030 50.000 0.00 0.00 0.00 4.79
684 686 2.029649 CCTCTCCTTTAACAACGGACGA 60.030 50.000 0.00 0.00 0.00 4.20
685 687 3.243336 CTCTCCTTTAACAACGGACGAG 58.757 50.000 0.00 0.00 0.00 4.18
686 688 2.624838 TCTCCTTTAACAACGGACGAGT 59.375 45.455 0.00 0.00 0.00 4.18
687 689 3.068590 TCTCCTTTAACAACGGACGAGTT 59.931 43.478 0.00 5.71 34.15 3.01
688 690 3.383761 TCCTTTAACAACGGACGAGTTC 58.616 45.455 0.00 0.00 30.96 3.01
689 691 2.154389 CCTTTAACAACGGACGAGTTCG 59.846 50.000 1.90 1.90 46.33 3.95
690 692 1.769733 TTAACAACGGACGAGTTCGG 58.230 50.000 8.89 0.00 44.95 4.30
691 693 0.039256 TAACAACGGACGAGTTCGGG 60.039 55.000 8.89 2.91 44.95 5.14
692 694 1.737355 AACAACGGACGAGTTCGGGA 61.737 55.000 8.89 0.00 44.95 5.14
693 695 1.214589 CAACGGACGAGTTCGGGAT 59.785 57.895 8.89 0.00 44.95 3.85
694 696 0.389426 CAACGGACGAGTTCGGGATT 60.389 55.000 8.89 0.00 44.95 3.01
695 697 0.389426 AACGGACGAGTTCGGGATTG 60.389 55.000 8.89 0.00 44.95 2.67
696 698 1.518572 CGGACGAGTTCGGGATTGG 60.519 63.158 6.48 0.00 44.95 3.16
697 699 1.895238 GGACGAGTTCGGGATTGGA 59.105 57.895 6.48 0.00 44.95 3.53
698 700 0.179108 GGACGAGTTCGGGATTGGAG 60.179 60.000 6.48 0.00 44.95 3.86
699 701 0.179108 GACGAGTTCGGGATTGGAGG 60.179 60.000 6.48 0.00 44.95 4.30
700 702 1.144057 CGAGTTCGGGATTGGAGGG 59.856 63.158 0.00 0.00 35.37 4.30
701 703 1.614241 CGAGTTCGGGATTGGAGGGT 61.614 60.000 0.00 0.00 35.37 4.34
702 704 0.618981 GAGTTCGGGATTGGAGGGTT 59.381 55.000 0.00 0.00 0.00 4.11
703 705 1.004394 GAGTTCGGGATTGGAGGGTTT 59.996 52.381 0.00 0.00 0.00 3.27
704 706 1.173913 GTTCGGGATTGGAGGGTTTG 58.826 55.000 0.00 0.00 0.00 2.93
705 707 0.039035 TTCGGGATTGGAGGGTTTGG 59.961 55.000 0.00 0.00 0.00 3.28
706 708 0.842905 TCGGGATTGGAGGGTTTGGA 60.843 55.000 0.00 0.00 0.00 3.53
707 709 0.394352 CGGGATTGGAGGGTTTGGAG 60.394 60.000 0.00 0.00 0.00 3.86
708 710 0.033109 GGGATTGGAGGGTTTGGAGG 60.033 60.000 0.00 0.00 0.00 4.30
709 711 0.999712 GGATTGGAGGGTTTGGAGGA 59.000 55.000 0.00 0.00 0.00 3.71
710 712 1.570979 GGATTGGAGGGTTTGGAGGAT 59.429 52.381 0.00 0.00 0.00 3.24
711 713 2.783510 GGATTGGAGGGTTTGGAGGATA 59.216 50.000 0.00 0.00 0.00 2.59
712 714 3.204382 GGATTGGAGGGTTTGGAGGATAA 59.796 47.826 0.00 0.00 0.00 1.75
713 715 4.140924 GGATTGGAGGGTTTGGAGGATAAT 60.141 45.833 0.00 0.00 0.00 1.28
714 716 5.074515 GGATTGGAGGGTTTGGAGGATAATA 59.925 44.000 0.00 0.00 0.00 0.98
715 717 6.411554 GGATTGGAGGGTTTGGAGGATAATAA 60.412 42.308 0.00 0.00 0.00 1.40
716 718 6.410222 TTGGAGGGTTTGGAGGATAATAAA 57.590 37.500 0.00 0.00 0.00 1.40
717 719 6.606241 TGGAGGGTTTGGAGGATAATAAAT 57.394 37.500 0.00 0.00 0.00 1.40
718 720 6.372931 TGGAGGGTTTGGAGGATAATAAATG 58.627 40.000 0.00 0.00 0.00 2.32
719 721 5.243954 GGAGGGTTTGGAGGATAATAAATGC 59.756 44.000 0.00 0.00 0.00 3.56
720 722 6.030727 AGGGTTTGGAGGATAATAAATGCT 57.969 37.500 0.00 0.00 0.00 3.79
721 723 6.071320 AGGGTTTGGAGGATAATAAATGCTC 58.929 40.000 0.00 0.00 36.02 4.26
722 724 5.833131 GGGTTTGGAGGATAATAAATGCTCA 59.167 40.000 8.48 0.00 38.10 4.26
723 725 6.494835 GGGTTTGGAGGATAATAAATGCTCAT 59.505 38.462 8.48 0.00 38.10 2.90
724 726 7.015584 GGGTTTGGAGGATAATAAATGCTCATT 59.984 37.037 8.48 0.00 38.10 2.57
725 727 9.077885 GGTTTGGAGGATAATAAATGCTCATTA 57.922 33.333 8.48 0.00 38.10 1.90
728 730 9.866655 TTGGAGGATAATAAATGCTCATTAACT 57.133 29.630 8.48 0.00 38.10 2.24
729 731 9.866655 TGGAGGATAATAAATGCTCATTAACTT 57.133 29.630 8.48 0.00 38.10 2.66
761 763 8.910351 AGTCTATTTAGTATTTGGATCCAAGC 57.090 34.615 25.69 19.18 37.24 4.01
762 764 8.494433 AGTCTATTTAGTATTTGGATCCAAGCA 58.506 33.333 25.69 14.00 37.24 3.91
763 765 9.289782 GTCTATTTAGTATTTGGATCCAAGCAT 57.710 33.333 25.69 19.69 37.24 3.79
764 766 9.288576 TCTATTTAGTATTTGGATCCAAGCATG 57.711 33.333 25.69 10.04 37.24 4.06
773 775 1.578215 ATCCAAGCATGGGTGAGGCT 61.578 55.000 8.36 0.00 45.93 4.58
774 776 0.913934 TCCAAGCATGGGTGAGGCTA 60.914 55.000 8.36 0.00 42.15 3.93
775 777 0.465097 CCAAGCATGGGTGAGGCTAG 60.465 60.000 0.00 0.00 42.15 3.42
776 778 1.099879 CAAGCATGGGTGAGGCTAGC 61.100 60.000 6.04 6.04 42.15 3.42
777 779 2.590007 GCATGGGTGAGGCTAGCG 60.590 66.667 9.00 0.00 0.00 4.26
778 780 3.094062 GCATGGGTGAGGCTAGCGA 62.094 63.158 9.00 0.00 0.00 4.93
779 781 1.068753 CATGGGTGAGGCTAGCGAG 59.931 63.158 9.00 0.00 0.00 5.03
780 782 1.381872 ATGGGTGAGGCTAGCGAGT 60.382 57.895 9.00 0.00 0.00 4.18
781 783 0.978146 ATGGGTGAGGCTAGCGAGTT 60.978 55.000 9.00 0.00 0.00 3.01
782 784 1.192146 TGGGTGAGGCTAGCGAGTTT 61.192 55.000 9.00 0.00 0.00 2.66
783 785 0.036294 GGGTGAGGCTAGCGAGTTTT 60.036 55.000 9.00 0.00 0.00 2.43
784 786 1.206371 GGGTGAGGCTAGCGAGTTTTA 59.794 52.381 9.00 0.00 0.00 1.52
785 787 2.541556 GGTGAGGCTAGCGAGTTTTAG 58.458 52.381 9.00 0.00 0.00 1.85
786 788 2.094130 GGTGAGGCTAGCGAGTTTTAGT 60.094 50.000 9.00 0.00 0.00 2.24
787 789 3.180613 GTGAGGCTAGCGAGTTTTAGTC 58.819 50.000 9.00 0.00 0.00 2.59
788 790 2.165845 TGAGGCTAGCGAGTTTTAGTCC 59.834 50.000 9.00 0.00 0.00 3.85
789 791 1.481363 AGGCTAGCGAGTTTTAGTCCC 59.519 52.381 9.00 0.00 0.00 4.46
790 792 1.206371 GGCTAGCGAGTTTTAGTCCCA 59.794 52.381 9.00 0.00 0.00 4.37
791 793 2.354403 GGCTAGCGAGTTTTAGTCCCAA 60.354 50.000 9.00 0.00 0.00 4.12
792 794 3.532542 GCTAGCGAGTTTTAGTCCCAAT 58.467 45.455 0.00 0.00 0.00 3.16
793 795 4.442472 GGCTAGCGAGTTTTAGTCCCAATA 60.442 45.833 9.00 0.00 0.00 1.90
794 796 4.507021 GCTAGCGAGTTTTAGTCCCAATAC 59.493 45.833 0.00 0.00 0.00 1.89
795 797 4.820894 AGCGAGTTTTAGTCCCAATACT 57.179 40.909 0.00 0.00 0.00 2.12
796 798 5.161943 AGCGAGTTTTAGTCCCAATACTT 57.838 39.130 0.00 0.00 0.00 2.24
797 799 5.557866 AGCGAGTTTTAGTCCCAATACTTT 58.442 37.500 0.00 0.00 0.00 2.66
798 800 6.002082 AGCGAGTTTTAGTCCCAATACTTTT 58.998 36.000 0.00 0.00 0.00 2.27
799 801 7.163441 AGCGAGTTTTAGTCCCAATACTTTTA 58.837 34.615 0.00 0.00 0.00 1.52
800 802 7.333672 AGCGAGTTTTAGTCCCAATACTTTTAG 59.666 37.037 0.00 0.00 0.00 1.85
801 803 7.118825 GCGAGTTTTAGTCCCAATACTTTTAGT 59.881 37.037 0.00 0.00 0.00 2.24
802 804 8.654215 CGAGTTTTAGTCCCAATACTTTTAGTC 58.346 37.037 0.00 0.00 0.00 2.59
803 805 9.498176 GAGTTTTAGTCCCAATACTTTTAGTCA 57.502 33.333 0.00 0.00 0.00 3.41
807 809 9.667107 TTTAGTCCCAATACTTTTAGTCATGAG 57.333 33.333 0.00 0.00 0.00 2.90
808 810 7.496346 AGTCCCAATACTTTTAGTCATGAGA 57.504 36.000 0.00 0.00 0.00 3.27
809 811 7.331791 AGTCCCAATACTTTTAGTCATGAGAC 58.668 38.462 0.00 0.00 45.31 3.36
821 823 4.046938 GTCATGAGACGAAAGCTATCCA 57.953 45.455 0.00 0.00 34.60 3.41
822 824 4.433615 GTCATGAGACGAAAGCTATCCAA 58.566 43.478 0.00 0.00 34.60 3.53
823 825 4.505922 GTCATGAGACGAAAGCTATCCAAG 59.494 45.833 0.00 0.00 34.60 3.61
824 826 6.971158 GTCATGAGACGAAAGCTATCCAAGC 61.971 48.000 0.00 0.00 42.57 4.01
843 845 4.301072 AGCACCCTCTAATTTAAGCACA 57.699 40.909 0.00 0.00 0.00 4.57
897 899 6.205853 AGACCTGTTGTAATTTTCGCACAATA 59.794 34.615 0.00 0.00 34.89 1.90
931 941 2.770802 ACTTCTCCATGATCTCCACCAG 59.229 50.000 0.00 0.00 0.00 4.00
1186 1353 6.017192 TGAGCACGATGGATATTGGTATTTTG 60.017 38.462 0.00 0.00 0.00 2.44
1280 1460 1.197721 GCAGTTGGATGTTTCGAGGTG 59.802 52.381 0.00 0.00 0.00 4.00
1423 1603 4.128643 TGTTGTTTTCGAAAGGACGGTAT 58.871 39.130 10.98 0.00 0.00 2.73
1741 2019 7.484959 GGTTTTGTGTAAGCTTCATTATAGCAC 59.515 37.037 0.00 1.80 41.11 4.40
1750 2028 5.406780 AGCTTCATTATAGCACGTATCAAGC 59.593 40.000 0.00 0.00 41.11 4.01
1802 2171 7.664318 TCTTGGTTTTGTTTAAGATCTAGACCC 59.336 37.037 0.00 0.00 0.00 4.46
1803 2172 6.843752 TGGTTTTGTTTAAGATCTAGACCCA 58.156 36.000 0.00 0.00 0.00 4.51
1804 2173 6.713450 TGGTTTTGTTTAAGATCTAGACCCAC 59.287 38.462 0.00 0.00 0.00 4.61
1806 2175 4.730949 TGTTTAAGATCTAGACCCACCG 57.269 45.455 0.00 0.00 0.00 4.94
1808 2177 2.750141 TAAGATCTAGACCCACCGCT 57.250 50.000 0.00 0.00 0.00 5.52
1809 2178 2.750141 AAGATCTAGACCCACCGCTA 57.250 50.000 0.00 0.00 0.00 4.26
1810 2179 1.984066 AGATCTAGACCCACCGCTAC 58.016 55.000 0.00 0.00 0.00 3.58
1811 2180 1.214673 AGATCTAGACCCACCGCTACA 59.785 52.381 0.00 0.00 0.00 2.74
1813 2182 1.180029 TCTAGACCCACCGCTACAAC 58.820 55.000 0.00 0.00 0.00 3.32
1843 2329 4.988065 ACGCAGTCGCAGTACAAT 57.012 50.000 0.00 0.00 29.74 2.71
1908 2616 0.963962 TTACCAGTCGAGGTCGCTTT 59.036 50.000 0.00 0.00 42.06 3.51
1911 2619 0.600255 CCAGTCGAGGTCGCTTTTGT 60.600 55.000 0.00 0.00 39.60 2.83
2023 2747 8.651589 TCATACAACTCCTCTTTCTTCTTCTA 57.348 34.615 0.00 0.00 0.00 2.10
2032 2756 3.838903 TCTTTCTTCTTCTACACCCTCCC 59.161 47.826 0.00 0.00 0.00 4.30
2044 2768 1.617839 CCCTCCCCTTCAGCTCCTT 60.618 63.158 0.00 0.00 0.00 3.36
2093 2996 5.336451 GCCCTTAATCAAAGTTTCGAACCAT 60.336 40.000 0.00 0.00 32.89 3.55
2107 3010 2.095853 CGAACCATGGGAGAAACGATTG 59.904 50.000 18.09 0.00 0.00 2.67
2109 3012 1.271871 ACCATGGGAGAAACGATTGCA 60.272 47.619 18.09 0.00 0.00 4.08
2111 3014 2.086869 CATGGGAGAAACGATTGCACT 58.913 47.619 0.00 0.00 0.00 4.40
2112 3015 3.270027 CATGGGAGAAACGATTGCACTA 58.730 45.455 0.00 0.00 0.00 2.74
2117 3020 0.247145 GAAACGATTGCACTACGGCG 60.247 55.000 4.80 4.80 36.28 6.46
2121 3024 1.472276 CGATTGCACTACGGCGTCTC 61.472 60.000 19.21 4.71 36.28 3.36
2125 3028 1.211969 GCACTACGGCGTCTCTCAA 59.788 57.895 19.21 0.00 0.00 3.02
2128 3031 0.956633 ACTACGGCGTCTCTCAACAA 59.043 50.000 19.21 0.00 0.00 2.83
2190 3093 8.849168 TGCAATCCGAAGACATGATTTTAATAT 58.151 29.630 0.00 0.00 0.00 1.28
2246 3754 3.202706 GAGGATTTCGCGGTGCCC 61.203 66.667 6.13 3.12 0.00 5.36
2260 3768 0.250295 GTGCCCGCCATAGCTTATCA 60.250 55.000 0.00 0.00 36.60 2.15
2365 3873 4.713792 AATACATCTCCCCCTTAAGCAG 57.286 45.455 0.00 0.00 0.00 4.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.454260 AGAAAAAGGGTCAAATATGAGACAC 57.546 36.000 9.29 6.15 38.44 3.67
1 2 8.383175 AGTAGAAAAAGGGTCAAATATGAGACA 58.617 33.333 9.29 0.00 35.88 3.41
2 3 8.794335 AGTAGAAAAAGGGTCAAATATGAGAC 57.206 34.615 0.35 0.35 35.88 3.36
4 5 9.892130 ACTAGTAGAAAAAGGGTCAAATATGAG 57.108 33.333 3.59 0.00 35.88 2.90
5 6 9.667107 CACTAGTAGAAAAAGGGTCAAATATGA 57.333 33.333 3.59 0.00 0.00 2.15
6 7 9.667107 TCACTAGTAGAAAAAGGGTCAAATATG 57.333 33.333 3.59 0.00 0.00 1.78
7 8 9.668497 GTCACTAGTAGAAAAAGGGTCAAATAT 57.332 33.333 3.59 0.00 0.00 1.28
8 9 8.877195 AGTCACTAGTAGAAAAAGGGTCAAATA 58.123 33.333 3.59 0.00 0.00 1.40
9 10 7.746703 AGTCACTAGTAGAAAAAGGGTCAAAT 58.253 34.615 3.59 0.00 0.00 2.32
10 11 7.133133 AGTCACTAGTAGAAAAAGGGTCAAA 57.867 36.000 3.59 0.00 0.00 2.69
11 12 6.742559 AGTCACTAGTAGAAAAAGGGTCAA 57.257 37.500 3.59 0.00 0.00 3.18
12 13 6.239515 GGAAGTCACTAGTAGAAAAAGGGTCA 60.240 42.308 3.59 0.00 0.00 4.02
13 14 6.164876 GGAAGTCACTAGTAGAAAAAGGGTC 58.835 44.000 3.59 0.00 0.00 4.46
14 15 5.012871 GGGAAGTCACTAGTAGAAAAAGGGT 59.987 44.000 3.59 0.00 0.00 4.34
15 16 5.489249 GGGAAGTCACTAGTAGAAAAAGGG 58.511 45.833 3.59 0.00 0.00 3.95
16 17 5.012768 TGGGGAAGTCACTAGTAGAAAAAGG 59.987 44.000 3.59 0.00 0.00 3.11
17 18 5.932883 GTGGGGAAGTCACTAGTAGAAAAAG 59.067 44.000 3.59 0.00 32.78 2.27
18 19 5.367352 TGTGGGGAAGTCACTAGTAGAAAAA 59.633 40.000 3.59 0.00 36.21 1.94
19 20 4.903049 TGTGGGGAAGTCACTAGTAGAAAA 59.097 41.667 3.59 0.00 36.21 2.29
20 21 4.485875 TGTGGGGAAGTCACTAGTAGAAA 58.514 43.478 3.59 0.00 36.21 2.52
21 22 4.122337 TGTGGGGAAGTCACTAGTAGAA 57.878 45.455 3.59 0.00 36.21 2.10
22 23 3.820195 TGTGGGGAAGTCACTAGTAGA 57.180 47.619 3.59 0.00 36.21 2.59
23 24 3.056035 GGTTGTGGGGAAGTCACTAGTAG 60.056 52.174 0.00 0.00 36.21 2.57
24 25 2.901839 GGTTGTGGGGAAGTCACTAGTA 59.098 50.000 0.00 0.00 36.21 1.82
25 26 1.697982 GGTTGTGGGGAAGTCACTAGT 59.302 52.381 0.00 0.00 36.21 2.57
26 27 1.003233 GGGTTGTGGGGAAGTCACTAG 59.997 57.143 0.00 0.00 36.21 2.57
27 28 1.061546 GGGTTGTGGGGAAGTCACTA 58.938 55.000 0.00 0.00 36.21 2.74
28 29 0.991355 TGGGTTGTGGGGAAGTCACT 60.991 55.000 0.00 0.00 36.21 3.41
29 30 0.822121 GTGGGTTGTGGGGAAGTCAC 60.822 60.000 0.00 0.00 35.82 3.67
30 31 1.534697 GTGGGTTGTGGGGAAGTCA 59.465 57.895 0.00 0.00 0.00 3.41
31 32 1.228459 GGTGGGTTGTGGGGAAGTC 60.228 63.158 0.00 0.00 0.00 3.01
32 33 2.006805 CTGGTGGGTTGTGGGGAAGT 62.007 60.000 0.00 0.00 0.00 3.01
33 34 1.228552 CTGGTGGGTTGTGGGGAAG 60.229 63.158 0.00 0.00 0.00 3.46
34 35 1.071314 ATCTGGTGGGTTGTGGGGAA 61.071 55.000 0.00 0.00 0.00 3.97
35 36 0.178858 TATCTGGTGGGTTGTGGGGA 60.179 55.000 0.00 0.00 0.00 4.81
36 37 0.034477 GTATCTGGTGGGTTGTGGGG 60.034 60.000 0.00 0.00 0.00 4.96
37 38 0.695924 TGTATCTGGTGGGTTGTGGG 59.304 55.000 0.00 0.00 0.00 4.61
38 39 2.368439 CATGTATCTGGTGGGTTGTGG 58.632 52.381 0.00 0.00 0.00 4.17
39 40 1.745087 GCATGTATCTGGTGGGTTGTG 59.255 52.381 0.00 0.00 0.00 3.33
40 41 1.354031 TGCATGTATCTGGTGGGTTGT 59.646 47.619 0.00 0.00 0.00 3.32
41 42 2.019249 CTGCATGTATCTGGTGGGTTG 58.981 52.381 0.00 0.00 0.00 3.77
42 43 1.915489 TCTGCATGTATCTGGTGGGTT 59.085 47.619 0.00 0.00 0.00 4.11
43 44 1.583556 TCTGCATGTATCTGGTGGGT 58.416 50.000 0.00 0.00 0.00 4.51
44 45 2.945080 ATCTGCATGTATCTGGTGGG 57.055 50.000 0.00 0.00 0.00 4.61
45 46 3.949754 ACAAATCTGCATGTATCTGGTGG 59.050 43.478 0.00 0.00 0.00 4.61
46 47 4.036027 GGACAAATCTGCATGTATCTGGTG 59.964 45.833 0.00 0.00 0.00 4.17
47 48 4.080129 AGGACAAATCTGCATGTATCTGGT 60.080 41.667 0.00 0.00 0.00 4.00
48 49 4.458397 AGGACAAATCTGCATGTATCTGG 58.542 43.478 0.00 0.00 0.00 3.86
49 50 6.446781 AAAGGACAAATCTGCATGTATCTG 57.553 37.500 0.00 0.00 0.00 2.90
50 51 5.295292 CGAAAGGACAAATCTGCATGTATCT 59.705 40.000 0.00 0.00 0.00 1.98
51 52 5.065218 ACGAAAGGACAAATCTGCATGTATC 59.935 40.000 0.00 0.00 0.00 2.24
52 53 4.943705 ACGAAAGGACAAATCTGCATGTAT 59.056 37.500 0.00 0.00 0.00 2.29
53 54 4.323417 ACGAAAGGACAAATCTGCATGTA 58.677 39.130 0.00 0.00 0.00 2.29
54 55 3.149196 ACGAAAGGACAAATCTGCATGT 58.851 40.909 0.00 0.00 0.00 3.21
55 56 3.438087 AGACGAAAGGACAAATCTGCATG 59.562 43.478 0.00 0.00 0.00 4.06
56 57 3.679389 AGACGAAAGGACAAATCTGCAT 58.321 40.909 0.00 0.00 0.00 3.96
57 58 3.067106 GAGACGAAAGGACAAATCTGCA 58.933 45.455 0.00 0.00 0.00 4.41
58 59 3.330267 AGAGACGAAAGGACAAATCTGC 58.670 45.455 0.00 0.00 0.00 4.26
59 60 4.387256 GTGAGAGACGAAAGGACAAATCTG 59.613 45.833 0.00 0.00 0.00 2.90
60 61 4.039245 TGTGAGAGACGAAAGGACAAATCT 59.961 41.667 0.00 0.00 0.00 2.40
61 62 4.307432 TGTGAGAGACGAAAGGACAAATC 58.693 43.478 0.00 0.00 0.00 2.17
62 63 4.310769 CTGTGAGAGACGAAAGGACAAAT 58.689 43.478 0.00 0.00 0.00 2.32
63 64 3.717707 CTGTGAGAGACGAAAGGACAAA 58.282 45.455 0.00 0.00 0.00 2.83
64 65 2.545952 GCTGTGAGAGACGAAAGGACAA 60.546 50.000 0.00 0.00 0.00 3.18
65 66 1.000163 GCTGTGAGAGACGAAAGGACA 60.000 52.381 0.00 0.00 0.00 4.02
66 67 1.000163 TGCTGTGAGAGACGAAAGGAC 60.000 52.381 0.00 0.00 0.00 3.85
67 68 1.328279 TGCTGTGAGAGACGAAAGGA 58.672 50.000 0.00 0.00 0.00 3.36
68 69 2.064762 CTTGCTGTGAGAGACGAAAGG 58.935 52.381 0.00 0.00 0.00 3.11
69 70 2.064762 CCTTGCTGTGAGAGACGAAAG 58.935 52.381 0.00 0.00 0.00 2.62
70 71 1.412710 ACCTTGCTGTGAGAGACGAAA 59.587 47.619 0.00 0.00 0.00 3.46
71 72 1.040646 ACCTTGCTGTGAGAGACGAA 58.959 50.000 0.00 0.00 0.00 3.85
72 73 0.315251 CACCTTGCTGTGAGAGACGA 59.685 55.000 0.00 0.00 38.55 4.20
73 74 1.287730 GCACCTTGCTGTGAGAGACG 61.288 60.000 5.90 0.00 40.96 4.18
74 75 0.250038 TGCACCTTGCTGTGAGAGAC 60.250 55.000 5.90 0.00 45.31 3.36
75 76 0.689055 ATGCACCTTGCTGTGAGAGA 59.311 50.000 0.00 0.00 45.31 3.10
76 77 2.391616 TATGCACCTTGCTGTGAGAG 57.608 50.000 0.00 0.00 45.31 3.20
77 78 4.486125 TTATATGCACCTTGCTGTGAGA 57.514 40.909 0.00 0.00 45.31 3.27
78 79 4.395854 TGTTTATATGCACCTTGCTGTGAG 59.604 41.667 0.00 0.00 45.31 3.51
79 80 4.331108 TGTTTATATGCACCTTGCTGTGA 58.669 39.130 0.00 0.00 45.31 3.58
80 81 4.700268 TGTTTATATGCACCTTGCTGTG 57.300 40.909 0.00 0.00 45.31 3.66
81 82 5.720371 TTTGTTTATATGCACCTTGCTGT 57.280 34.783 0.00 0.00 45.31 4.40
82 83 5.348451 GGTTTTGTTTATATGCACCTTGCTG 59.652 40.000 0.00 0.00 45.31 4.41
83 84 5.478407 GGTTTTGTTTATATGCACCTTGCT 58.522 37.500 0.00 0.00 45.31 3.91
84 85 4.326009 CGGTTTTGTTTATATGCACCTTGC 59.674 41.667 0.00 0.00 45.29 4.01
85 86 4.862018 CCGGTTTTGTTTATATGCACCTTG 59.138 41.667 0.00 0.00 0.00 3.61
86 87 4.767928 TCCGGTTTTGTTTATATGCACCTT 59.232 37.500 0.00 0.00 0.00 3.50
87 88 4.337145 TCCGGTTTTGTTTATATGCACCT 58.663 39.130 0.00 0.00 0.00 4.00
88 89 4.396790 TCTCCGGTTTTGTTTATATGCACC 59.603 41.667 0.00 0.00 0.00 5.01
89 90 5.448632 CCTCTCCGGTTTTGTTTATATGCAC 60.449 44.000 0.00 0.00 0.00 4.57
90 91 4.638421 CCTCTCCGGTTTTGTTTATATGCA 59.362 41.667 0.00 0.00 0.00 3.96
91 92 4.497507 GCCTCTCCGGTTTTGTTTATATGC 60.498 45.833 0.00 0.00 34.25 3.14
92 93 4.638421 TGCCTCTCCGGTTTTGTTTATATG 59.362 41.667 0.00 0.00 34.25 1.78
93 94 4.850680 TGCCTCTCCGGTTTTGTTTATAT 58.149 39.130 0.00 0.00 34.25 0.86
94 95 4.020039 TCTGCCTCTCCGGTTTTGTTTATA 60.020 41.667 0.00 0.00 34.25 0.98
95 96 3.081804 CTGCCTCTCCGGTTTTGTTTAT 58.918 45.455 0.00 0.00 34.25 1.40
96 97 2.105134 TCTGCCTCTCCGGTTTTGTTTA 59.895 45.455 0.00 0.00 34.25 2.01
97 98 1.133915 TCTGCCTCTCCGGTTTTGTTT 60.134 47.619 0.00 0.00 34.25 2.83
98 99 0.472471 TCTGCCTCTCCGGTTTTGTT 59.528 50.000 0.00 0.00 34.25 2.83
99 100 0.250338 GTCTGCCTCTCCGGTTTTGT 60.250 55.000 0.00 0.00 34.25 2.83
100 101 0.250295 TGTCTGCCTCTCCGGTTTTG 60.250 55.000 0.00 0.00 34.25 2.44
101 102 0.472471 TTGTCTGCCTCTCCGGTTTT 59.528 50.000 0.00 0.00 34.25 2.43
102 103 0.250338 GTTGTCTGCCTCTCCGGTTT 60.250 55.000 0.00 0.00 34.25 3.27
103 104 1.371558 GTTGTCTGCCTCTCCGGTT 59.628 57.895 0.00 0.00 34.25 4.44
104 105 2.584391 GGTTGTCTGCCTCTCCGGT 61.584 63.158 0.00 0.00 34.25 5.28
105 106 2.266055 GGTTGTCTGCCTCTCCGG 59.734 66.667 0.00 0.00 0.00 5.14
106 107 1.592400 TACGGTTGTCTGCCTCTCCG 61.592 60.000 0.00 0.00 42.94 4.63
107 108 0.108756 GTACGGTTGTCTGCCTCTCC 60.109 60.000 0.00 0.00 0.00 3.71
108 109 0.601558 TGTACGGTTGTCTGCCTCTC 59.398 55.000 0.00 0.00 0.00 3.20
109 110 0.603569 CTGTACGGTTGTCTGCCTCT 59.396 55.000 0.00 0.00 0.00 3.69
110 111 0.389948 CCTGTACGGTTGTCTGCCTC 60.390 60.000 0.00 0.00 0.00 4.70
111 112 1.671742 CCTGTACGGTTGTCTGCCT 59.328 57.895 0.00 0.00 0.00 4.75
112 113 2.033194 GCCTGTACGGTTGTCTGCC 61.033 63.158 0.00 0.00 34.25 4.85
113 114 1.291877 CTGCCTGTACGGTTGTCTGC 61.292 60.000 0.00 0.00 34.25 4.26
114 115 1.291877 GCTGCCTGTACGGTTGTCTG 61.292 60.000 0.00 0.00 34.25 3.51
115 116 1.004918 GCTGCCTGTACGGTTGTCT 60.005 57.895 0.00 0.00 34.25 3.41
116 117 2.380410 CGCTGCCTGTACGGTTGTC 61.380 63.158 0.00 0.00 34.25 3.18
117 118 2.357034 CGCTGCCTGTACGGTTGT 60.357 61.111 0.00 0.00 34.25 3.32
118 119 3.118454 CCGCTGCCTGTACGGTTG 61.118 66.667 0.00 0.00 42.01 3.77
119 120 4.388499 CCCGCTGCCTGTACGGTT 62.388 66.667 0.00 0.00 45.49 4.44
134 135 3.286694 TTCATGCTGGAGGGTGCCC 62.287 63.158 0.00 0.00 0.00 5.36
135 136 1.751927 CTTCATGCTGGAGGGTGCC 60.752 63.158 0.00 0.00 0.00 5.01
136 137 1.751927 CCTTCATGCTGGAGGGTGC 60.752 63.158 3.24 0.00 29.89 5.01
137 138 0.038744 AACCTTCATGCTGGAGGGTG 59.961 55.000 11.60 0.00 45.52 4.61
138 139 4.257890 ACCTTCATGCTGGAGGGT 57.742 55.556 13.23 9.94 41.92 4.34
139 140 1.180029 CAAACCTTCATGCTGGAGGG 58.820 55.000 13.23 9.39 39.76 4.30
140 141 1.815003 GACAAACCTTCATGCTGGAGG 59.185 52.381 10.18 8.50 0.00 4.30
141 142 1.815003 GGACAAACCTTCATGCTGGAG 59.185 52.381 10.18 3.57 35.41 3.86
142 143 1.547675 GGGACAAACCTTCATGCTGGA 60.548 52.381 10.18 0.00 38.98 3.86
143 144 0.890683 GGGACAAACCTTCATGCTGG 59.109 55.000 2.82 2.82 38.98 4.85
144 145 1.915141 AGGGACAAACCTTCATGCTG 58.085 50.000 0.00 0.00 37.69 4.41
152 153 1.132365 AGGAGAGGAAGGGACAAACCT 60.132 52.381 0.00 0.00 44.56 3.50
153 154 1.279558 GAGGAGAGGAAGGGACAAACC 59.720 57.143 0.00 0.00 38.08 3.27
154 155 2.235155 GAGAGGAGAGGAAGGGACAAAC 59.765 54.545 0.00 0.00 0.00 2.93
155 156 2.541466 GAGAGGAGAGGAAGGGACAAA 58.459 52.381 0.00 0.00 0.00 2.83
156 157 1.617263 CGAGAGGAGAGGAAGGGACAA 60.617 57.143 0.00 0.00 0.00 3.18
157 158 0.033991 CGAGAGGAGAGGAAGGGACA 60.034 60.000 0.00 0.00 0.00 4.02
158 159 2.801859 CGAGAGGAGAGGAAGGGAC 58.198 63.158 0.00 0.00 0.00 4.46
187 188 0.669619 TTCCTTGTGTGCATGCACTG 59.330 50.000 41.43 29.19 46.30 3.66
188 189 1.401761 TTTCCTTGTGTGCATGCACT 58.598 45.000 41.43 0.00 46.30 4.40
189 190 2.129607 CTTTTCCTTGTGTGCATGCAC 58.870 47.619 38.00 38.00 46.33 4.57
190 191 1.068895 CCTTTTCCTTGTGTGCATGCA 59.931 47.619 18.46 18.46 0.00 3.96
191 192 1.340889 TCCTTTTCCTTGTGTGCATGC 59.659 47.619 11.82 11.82 0.00 4.06
192 193 2.886523 TCTCCTTTTCCTTGTGTGCATG 59.113 45.455 0.00 0.00 0.00 4.06
193 194 3.152341 CTCTCCTTTTCCTTGTGTGCAT 58.848 45.455 0.00 0.00 0.00 3.96
194 195 2.575532 CTCTCCTTTTCCTTGTGTGCA 58.424 47.619 0.00 0.00 0.00 4.57
195 196 1.882623 CCTCTCCTTTTCCTTGTGTGC 59.117 52.381 0.00 0.00 0.00 4.57
196 197 1.882623 GCCTCTCCTTTTCCTTGTGTG 59.117 52.381 0.00 0.00 0.00 3.82
197 198 1.494721 TGCCTCTCCTTTTCCTTGTGT 59.505 47.619 0.00 0.00 0.00 3.72
198 199 2.157738 CTGCCTCTCCTTTTCCTTGTG 58.842 52.381 0.00 0.00 0.00 3.33
199 200 1.074566 CCTGCCTCTCCTTTTCCTTGT 59.925 52.381 0.00 0.00 0.00 3.16
200 201 1.074566 ACCTGCCTCTCCTTTTCCTTG 59.925 52.381 0.00 0.00 0.00 3.61
201 202 1.074566 CACCTGCCTCTCCTTTTCCTT 59.925 52.381 0.00 0.00 0.00 3.36
202 203 0.695347 CACCTGCCTCTCCTTTTCCT 59.305 55.000 0.00 0.00 0.00 3.36
203 204 0.693049 TCACCTGCCTCTCCTTTTCC 59.307 55.000 0.00 0.00 0.00 3.13
204 205 1.611936 GGTCACCTGCCTCTCCTTTTC 60.612 57.143 0.00 0.00 0.00 2.29
205 206 0.402121 GGTCACCTGCCTCTCCTTTT 59.598 55.000 0.00 0.00 0.00 2.27
206 207 0.768221 TGGTCACCTGCCTCTCCTTT 60.768 55.000 0.00 0.00 0.00 3.11
207 208 0.548682 ATGGTCACCTGCCTCTCCTT 60.549 55.000 0.00 0.00 0.00 3.36
208 209 0.980231 GATGGTCACCTGCCTCTCCT 60.980 60.000 0.00 0.00 0.00 3.69
209 210 1.524482 GATGGTCACCTGCCTCTCC 59.476 63.158 0.00 0.00 0.00 3.71
210 211 1.142748 CGATGGTCACCTGCCTCTC 59.857 63.158 0.00 0.00 0.00 3.20
211 212 2.362369 CCGATGGTCACCTGCCTCT 61.362 63.158 0.00 0.00 0.00 3.69
212 213 2.187946 CCGATGGTCACCTGCCTC 59.812 66.667 0.00 0.00 0.00 4.70
213 214 3.402681 CCCGATGGTCACCTGCCT 61.403 66.667 0.00 0.00 0.00 4.75
215 216 4.101448 AGCCCGATGGTCACCTGC 62.101 66.667 0.00 0.00 0.00 4.85
216 217 2.124983 CAGCCCGATGGTCACCTG 60.125 66.667 0.00 0.00 0.00 4.00
217 218 4.101448 GCAGCCCGATGGTCACCT 62.101 66.667 0.00 0.00 0.00 4.00
228 229 2.818274 CGTTTACCTCGGCAGCCC 60.818 66.667 5.63 0.00 0.00 5.19
229 230 2.098831 GTCGTTTACCTCGGCAGCC 61.099 63.158 0.00 0.00 32.96 4.85
230 231 2.098831 GGTCGTTTACCTCGGCAGC 61.099 63.158 0.00 0.00 45.75 5.25
231 232 4.180496 GGTCGTTTACCTCGGCAG 57.820 61.111 0.00 0.00 45.75 4.85
239 240 3.192212 ACTGTAGGTAGCTGGTCGTTTAC 59.808 47.826 4.27 0.00 0.00 2.01
240 241 3.192001 CACTGTAGGTAGCTGGTCGTTTA 59.808 47.826 4.27 0.00 0.00 2.01
241 242 2.029290 CACTGTAGGTAGCTGGTCGTTT 60.029 50.000 4.27 0.00 0.00 3.60
242 243 1.544691 CACTGTAGGTAGCTGGTCGTT 59.455 52.381 4.27 0.00 0.00 3.85
243 244 1.174783 CACTGTAGGTAGCTGGTCGT 58.825 55.000 4.27 0.00 0.00 4.34
244 245 1.174783 ACACTGTAGGTAGCTGGTCG 58.825 55.000 4.27 0.00 0.00 4.79
245 246 3.679824 AAACACTGTAGGTAGCTGGTC 57.320 47.619 4.27 0.00 0.00 4.02
246 247 5.363005 CCTATAAACACTGTAGGTAGCTGGT 59.637 44.000 4.27 0.00 32.20 4.00
247 248 5.221461 CCCTATAAACACTGTAGGTAGCTGG 60.221 48.000 4.27 0.00 34.47 4.85
248 249 5.363005 ACCCTATAAACACTGTAGGTAGCTG 59.637 44.000 4.27 0.00 34.47 4.24
249 250 5.526434 ACCCTATAAACACTGTAGGTAGCT 58.474 41.667 0.00 0.00 34.47 3.32
250 251 5.866159 ACCCTATAAACACTGTAGGTAGC 57.134 43.478 0.00 0.00 34.47 3.58
251 252 9.139734 TGATTACCCTATAAACACTGTAGGTAG 57.860 37.037 0.00 0.00 34.47 3.18
252 253 8.917088 GTGATTACCCTATAAACACTGTAGGTA 58.083 37.037 0.00 0.00 34.47 3.08
253 254 7.622479 AGTGATTACCCTATAAACACTGTAGGT 59.378 37.037 8.31 0.00 38.52 3.08
254 255 8.019656 AGTGATTACCCTATAAACACTGTAGG 57.980 38.462 8.31 0.00 38.52 3.18
255 256 9.886132 AAAGTGATTACCCTATAAACACTGTAG 57.114 33.333 9.49 0.00 38.85 2.74
256 257 9.661563 CAAAGTGATTACCCTATAAACACTGTA 57.338 33.333 9.49 0.00 38.85 2.74
257 258 8.380099 TCAAAGTGATTACCCTATAAACACTGT 58.620 33.333 9.49 3.06 38.85 3.55
258 259 8.786826 TCAAAGTGATTACCCTATAAACACTG 57.213 34.615 9.49 1.92 38.85 3.66
259 260 9.614792 GATCAAAGTGATTACCCTATAAACACT 57.385 33.333 4.34 4.34 40.62 3.55
260 261 8.837389 GGATCAAAGTGATTACCCTATAAACAC 58.163 37.037 0.00 0.00 37.20 3.32
322 324 2.811431 CTGCGGAAGTTTTGTATCACCA 59.189 45.455 0.00 0.00 0.00 4.17
442 444 0.179119 GCATCATGCACCAGAAAGCC 60.179 55.000 4.20 0.00 44.26 4.35
443 445 3.340727 GCATCATGCACCAGAAAGC 57.659 52.632 4.20 0.00 44.26 3.51
484 486 1.005215 CTTGGATCCAAGCACCCTCTT 59.995 52.381 35.47 0.00 45.38 2.85
485 487 0.622665 CTTGGATCCAAGCACCCTCT 59.377 55.000 35.47 0.00 45.38 3.69
486 488 3.181526 CTTGGATCCAAGCACCCTC 57.818 57.895 35.47 0.00 45.38 4.30
494 496 8.390921 AGACTAAAATAAGTTCCTTGGATCCAA 58.609 33.333 25.53 25.53 0.00 3.53
495 497 7.829211 CAGACTAAAATAAGTTCCTTGGATCCA 59.171 37.037 11.44 11.44 0.00 3.41
496 498 8.047310 TCAGACTAAAATAAGTTCCTTGGATCC 58.953 37.037 4.20 4.20 0.00 3.36
497 499 8.884726 GTCAGACTAAAATAAGTTCCTTGGATC 58.115 37.037 0.00 0.00 0.00 3.36
498 500 8.606830 AGTCAGACTAAAATAAGTTCCTTGGAT 58.393 33.333 0.00 0.00 0.00 3.41
499 501 7.974504 AGTCAGACTAAAATAAGTTCCTTGGA 58.025 34.615 0.00 0.00 0.00 3.53
500 502 9.720769 TTAGTCAGACTAAAATAAGTTCCTTGG 57.279 33.333 19.07 0.00 37.71 3.61
520 522 9.654663 GCCTCTTAAAGAGACTATTTTTAGTCA 57.345 33.333 13.86 0.00 45.07 3.41
521 523 9.878667 AGCCTCTTAAAGAGACTATTTTTAGTC 57.121 33.333 0.00 5.24 45.07 2.59
529 531 9.878667 GAAACTTTAGCCTCTTAAAGAGACTAT 57.121 33.333 11.30 0.00 45.07 2.12
530 532 8.867097 TGAAACTTTAGCCTCTTAAAGAGACTA 58.133 33.333 11.30 0.40 45.07 2.59
531 533 7.736893 TGAAACTTTAGCCTCTTAAAGAGACT 58.263 34.615 11.30 1.37 45.07 3.24
532 534 7.964604 TGAAACTTTAGCCTCTTAAAGAGAC 57.035 36.000 11.30 0.00 45.07 3.36
533 535 7.173390 GCTTGAAACTTTAGCCTCTTAAAGAGA 59.827 37.037 11.30 0.00 45.07 3.10
534 536 7.041098 TGCTTGAAACTTTAGCCTCTTAAAGAG 60.041 37.037 11.30 0.56 41.17 2.85
535 537 6.770785 TGCTTGAAACTTTAGCCTCTTAAAGA 59.229 34.615 11.30 0.00 41.17 2.52
536 538 6.858478 GTGCTTGAAACTTTAGCCTCTTAAAG 59.142 38.462 4.46 4.46 43.21 1.85
537 539 6.238925 GGTGCTTGAAACTTTAGCCTCTTAAA 60.239 38.462 0.00 0.00 34.03 1.52
538 540 5.240844 GGTGCTTGAAACTTTAGCCTCTTAA 59.759 40.000 0.00 0.00 34.03 1.85
539 541 4.760204 GGTGCTTGAAACTTTAGCCTCTTA 59.240 41.667 0.00 0.00 34.03 2.10
540 542 3.570125 GGTGCTTGAAACTTTAGCCTCTT 59.430 43.478 0.00 0.00 34.03 2.85
541 543 3.149981 GGTGCTTGAAACTTTAGCCTCT 58.850 45.455 0.00 0.00 34.03 3.69
542 544 3.149981 AGGTGCTTGAAACTTTAGCCTC 58.850 45.455 0.00 0.00 34.03 4.70
543 545 3.149981 GAGGTGCTTGAAACTTTAGCCT 58.850 45.455 0.00 0.00 34.03 4.58
544 546 3.057946 CAGAGGTGCTTGAAACTTTAGCC 60.058 47.826 0.00 0.00 34.03 3.93
545 547 3.815401 TCAGAGGTGCTTGAAACTTTAGC 59.185 43.478 0.00 0.00 35.50 3.09
546 548 5.059833 AGTCAGAGGTGCTTGAAACTTTAG 58.940 41.667 0.00 0.00 0.00 1.85
547 549 5.036117 AGTCAGAGGTGCTTGAAACTTTA 57.964 39.130 0.00 0.00 0.00 1.85
548 550 3.891049 AGTCAGAGGTGCTTGAAACTTT 58.109 40.909 0.00 0.00 0.00 2.66
549 551 3.567478 AGTCAGAGGTGCTTGAAACTT 57.433 42.857 0.00 0.00 0.00 2.66
550 552 4.689612 TTAGTCAGAGGTGCTTGAAACT 57.310 40.909 0.00 0.00 0.00 2.66
551 553 5.057149 TCTTTAGTCAGAGGTGCTTGAAAC 58.943 41.667 0.00 0.00 0.00 2.78
552 554 5.290493 TCTTTAGTCAGAGGTGCTTGAAA 57.710 39.130 0.00 0.00 0.00 2.69
553 555 4.887748 CTCTTTAGTCAGAGGTGCTTGAA 58.112 43.478 0.00 0.00 37.28 2.69
554 556 4.527509 CTCTTTAGTCAGAGGTGCTTGA 57.472 45.455 0.00 0.00 37.28 3.02
562 564 5.046231 AGTTTTAGCCCCTCTTTAGTCAGAG 60.046 44.000 0.00 0.00 40.23 3.35
563 565 4.844655 AGTTTTAGCCCCTCTTTAGTCAGA 59.155 41.667 0.00 0.00 0.00 3.27
564 566 4.938226 CAGTTTTAGCCCCTCTTTAGTCAG 59.062 45.833 0.00 0.00 0.00 3.51
565 567 4.263331 CCAGTTTTAGCCCCTCTTTAGTCA 60.263 45.833 0.00 0.00 0.00 3.41
566 568 4.262617 CCAGTTTTAGCCCCTCTTTAGTC 58.737 47.826 0.00 0.00 0.00 2.59
567 569 3.656264 ACCAGTTTTAGCCCCTCTTTAGT 59.344 43.478 0.00 0.00 0.00 2.24
568 570 4.019231 AGACCAGTTTTAGCCCCTCTTTAG 60.019 45.833 0.00 0.00 0.00 1.85
569 571 3.914435 AGACCAGTTTTAGCCCCTCTTTA 59.086 43.478 0.00 0.00 0.00 1.85
570 572 2.716969 AGACCAGTTTTAGCCCCTCTTT 59.283 45.455 0.00 0.00 0.00 2.52
571 573 2.349445 AGACCAGTTTTAGCCCCTCTT 58.651 47.619 0.00 0.00 0.00 2.85
572 574 2.040412 CAAGACCAGTTTTAGCCCCTCT 59.960 50.000 0.00 0.00 0.00 3.69
573 575 2.039879 TCAAGACCAGTTTTAGCCCCTC 59.960 50.000 0.00 0.00 0.00 4.30
574 576 2.040412 CTCAAGACCAGTTTTAGCCCCT 59.960 50.000 0.00 0.00 0.00 4.79
575 577 2.039879 TCTCAAGACCAGTTTTAGCCCC 59.960 50.000 0.00 0.00 0.00 5.80
576 578 3.075148 GTCTCAAGACCAGTTTTAGCCC 58.925 50.000 0.00 0.00 39.07 5.19
577 579 4.009370 AGTCTCAAGACCAGTTTTAGCC 57.991 45.455 6.54 0.00 45.85 3.93
578 580 7.674471 AATTAGTCTCAAGACCAGTTTTAGC 57.326 36.000 6.54 0.00 45.85 3.09
615 617 8.270030 ACTAATCAACATTTTAGTAGGGGTACC 58.730 37.037 2.17 2.17 41.38 3.34
616 618 9.322773 GACTAATCAACATTTTAGTAGGGGTAC 57.677 37.037 0.00 0.00 38.45 3.34
617 619 8.488668 GGACTAATCAACATTTTAGTAGGGGTA 58.511 37.037 0.00 0.00 38.45 3.69
618 620 7.184022 AGGACTAATCAACATTTTAGTAGGGGT 59.816 37.037 0.00 0.00 38.45 4.95
619 621 7.574607 AGGACTAATCAACATTTTAGTAGGGG 58.425 38.462 0.00 0.00 38.45 4.79
620 622 8.487028 AGAGGACTAATCAACATTTTAGTAGGG 58.513 37.037 0.00 0.00 38.45 3.53
621 623 9.535878 GAGAGGACTAATCAACATTTTAGTAGG 57.464 37.037 0.00 0.00 38.45 3.18
624 626 9.041354 AGAGAGAGGACTAATCAACATTTTAGT 57.959 33.333 0.00 0.00 40.44 2.24
625 627 9.528018 GAGAGAGAGGACTAATCAACATTTTAG 57.472 37.037 0.00 0.00 0.00 1.85
626 628 8.478877 GGAGAGAGAGGACTAATCAACATTTTA 58.521 37.037 0.00 0.00 0.00 1.52
627 629 7.181845 AGGAGAGAGAGGACTAATCAACATTTT 59.818 37.037 0.00 0.00 0.00 1.82
628 630 6.671779 AGGAGAGAGAGGACTAATCAACATTT 59.328 38.462 0.00 0.00 0.00 2.32
629 631 6.201591 AGGAGAGAGAGGACTAATCAACATT 58.798 40.000 0.00 0.00 0.00 2.71
630 632 5.776358 AGGAGAGAGAGGACTAATCAACAT 58.224 41.667 0.00 0.00 0.00 2.71
631 633 5.197451 GAGGAGAGAGAGGACTAATCAACA 58.803 45.833 0.00 0.00 0.00 3.33
632 634 5.197451 TGAGGAGAGAGAGGACTAATCAAC 58.803 45.833 0.00 0.00 0.00 3.18
633 635 5.458451 TGAGGAGAGAGAGGACTAATCAA 57.542 43.478 0.00 0.00 0.00 2.57
634 636 5.661503 ATGAGGAGAGAGAGGACTAATCA 57.338 43.478 0.00 0.00 0.00 2.57
635 637 6.976934 AAATGAGGAGAGAGAGGACTAATC 57.023 41.667 0.00 0.00 0.00 1.75
636 638 8.065007 AGTTAAATGAGGAGAGAGAGGACTAAT 58.935 37.037 0.00 0.00 0.00 1.73
637 639 7.415086 AGTTAAATGAGGAGAGAGAGGACTAA 58.585 38.462 0.00 0.00 0.00 2.24
638 640 6.975949 AGTTAAATGAGGAGAGAGAGGACTA 58.024 40.000 0.00 0.00 0.00 2.59
639 641 5.837829 AGTTAAATGAGGAGAGAGAGGACT 58.162 41.667 0.00 0.00 0.00 3.85
640 642 5.068591 GGAGTTAAATGAGGAGAGAGAGGAC 59.931 48.000 0.00 0.00 0.00 3.85
641 643 5.043732 AGGAGTTAAATGAGGAGAGAGAGGA 60.044 44.000 0.00 0.00 0.00 3.71
642 644 5.208121 AGGAGTTAAATGAGGAGAGAGAGG 58.792 45.833 0.00 0.00 0.00 3.69
643 645 6.129179 AGAGGAGTTAAATGAGGAGAGAGAG 58.871 44.000 0.00 0.00 0.00 3.20
644 646 6.086011 AGAGGAGTTAAATGAGGAGAGAGA 57.914 41.667 0.00 0.00 0.00 3.10
645 647 5.301805 GGAGAGGAGTTAAATGAGGAGAGAG 59.698 48.000 0.00 0.00 0.00 3.20
646 648 5.043732 AGGAGAGGAGTTAAATGAGGAGAGA 60.044 44.000 0.00 0.00 0.00 3.10
647 649 5.208121 AGGAGAGGAGTTAAATGAGGAGAG 58.792 45.833 0.00 0.00 0.00 3.20
648 650 5.213868 AGGAGAGGAGTTAAATGAGGAGA 57.786 43.478 0.00 0.00 0.00 3.71
649 651 5.948742 AAGGAGAGGAGTTAAATGAGGAG 57.051 43.478 0.00 0.00 0.00 3.69
650 652 7.236847 TGTTAAAGGAGAGGAGTTAAATGAGGA 59.763 37.037 0.00 0.00 0.00 3.71
651 653 7.394816 TGTTAAAGGAGAGGAGTTAAATGAGG 58.605 38.462 0.00 0.00 0.00 3.86
652 654 8.722394 GTTGTTAAAGGAGAGGAGTTAAATGAG 58.278 37.037 0.00 0.00 0.00 2.90
653 655 7.386848 CGTTGTTAAAGGAGAGGAGTTAAATGA 59.613 37.037 0.00 0.00 0.00 2.57
654 656 7.360946 CCGTTGTTAAAGGAGAGGAGTTAAATG 60.361 40.741 0.00 0.00 0.00 2.32
655 657 6.653740 CCGTTGTTAAAGGAGAGGAGTTAAAT 59.346 38.462 0.00 0.00 0.00 1.40
656 658 5.993441 CCGTTGTTAAAGGAGAGGAGTTAAA 59.007 40.000 0.00 0.00 0.00 1.52
657 659 5.305128 TCCGTTGTTAAAGGAGAGGAGTTAA 59.695 40.000 0.00 0.00 0.00 2.01
658 660 4.834496 TCCGTTGTTAAAGGAGAGGAGTTA 59.166 41.667 0.00 0.00 0.00 2.24
659 661 3.644738 TCCGTTGTTAAAGGAGAGGAGTT 59.355 43.478 0.00 0.00 0.00 3.01
660 662 3.006644 GTCCGTTGTTAAAGGAGAGGAGT 59.993 47.826 0.00 0.00 34.29 3.85
661 663 3.586892 GTCCGTTGTTAAAGGAGAGGAG 58.413 50.000 0.00 0.00 34.29 3.69
662 664 2.029649 CGTCCGTTGTTAAAGGAGAGGA 60.030 50.000 0.00 0.00 34.29 3.71
663 665 2.029649 TCGTCCGTTGTTAAAGGAGAGG 60.030 50.000 0.00 0.00 34.29 3.69
664 666 3.243336 CTCGTCCGTTGTTAAAGGAGAG 58.757 50.000 0.00 3.58 34.29 3.20
665 667 2.624838 ACTCGTCCGTTGTTAAAGGAGA 59.375 45.455 0.00 0.00 34.29 3.71
666 668 3.022607 ACTCGTCCGTTGTTAAAGGAG 57.977 47.619 0.00 0.00 34.29 3.69
667 669 3.383761 GAACTCGTCCGTTGTTAAAGGA 58.616 45.455 0.00 0.00 0.00 3.36
668 670 2.154389 CGAACTCGTCCGTTGTTAAAGG 59.846 50.000 0.00 0.00 34.11 3.11
669 671 2.154389 CCGAACTCGTCCGTTGTTAAAG 59.846 50.000 0.00 0.00 37.74 1.85
670 672 2.126467 CCGAACTCGTCCGTTGTTAAA 58.874 47.619 0.00 0.00 37.74 1.52
671 673 1.602668 CCCGAACTCGTCCGTTGTTAA 60.603 52.381 0.00 0.00 37.74 2.01
672 674 0.039256 CCCGAACTCGTCCGTTGTTA 60.039 55.000 0.00 0.00 37.74 2.41
673 675 1.300388 CCCGAACTCGTCCGTTGTT 60.300 57.895 0.00 1.94 37.74 2.83
674 676 1.530013 ATCCCGAACTCGTCCGTTGT 61.530 55.000 0.00 0.00 37.74 3.32
675 677 0.389426 AATCCCGAACTCGTCCGTTG 60.389 55.000 0.00 0.00 37.74 4.10
676 678 0.389426 CAATCCCGAACTCGTCCGTT 60.389 55.000 0.00 0.00 37.74 4.44
677 679 1.214589 CAATCCCGAACTCGTCCGT 59.785 57.895 0.00 0.00 37.74 4.69
678 680 1.518572 CCAATCCCGAACTCGTCCG 60.519 63.158 0.00 0.00 37.74 4.79
679 681 0.179108 CTCCAATCCCGAACTCGTCC 60.179 60.000 0.00 0.00 37.74 4.79
680 682 0.179108 CCTCCAATCCCGAACTCGTC 60.179 60.000 0.00 0.00 37.74 4.20
681 683 1.614241 CCCTCCAATCCCGAACTCGT 61.614 60.000 0.00 0.00 37.74 4.18
682 684 1.144057 CCCTCCAATCCCGAACTCG 59.856 63.158 0.00 0.00 39.44 4.18
683 685 0.618981 AACCCTCCAATCCCGAACTC 59.381 55.000 0.00 0.00 0.00 3.01
684 686 1.073098 AAACCCTCCAATCCCGAACT 58.927 50.000 0.00 0.00 0.00 3.01
685 687 1.173913 CAAACCCTCCAATCCCGAAC 58.826 55.000 0.00 0.00 0.00 3.95
686 688 0.039035 CCAAACCCTCCAATCCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
687 689 0.842905 TCCAAACCCTCCAATCCCGA 60.843 55.000 0.00 0.00 0.00 5.14
688 690 0.394352 CTCCAAACCCTCCAATCCCG 60.394 60.000 0.00 0.00 0.00 5.14
689 691 0.033109 CCTCCAAACCCTCCAATCCC 60.033 60.000 0.00 0.00 0.00 3.85
690 692 0.999712 TCCTCCAAACCCTCCAATCC 59.000 55.000 0.00 0.00 0.00 3.01
691 693 4.519906 TTATCCTCCAAACCCTCCAATC 57.480 45.455 0.00 0.00 0.00 2.67
692 694 6.606241 TTATTATCCTCCAAACCCTCCAAT 57.394 37.500 0.00 0.00 0.00 3.16
693 695 6.410222 TTTATTATCCTCCAAACCCTCCAA 57.590 37.500 0.00 0.00 0.00 3.53
694 696 6.372931 CATTTATTATCCTCCAAACCCTCCA 58.627 40.000 0.00 0.00 0.00 3.86
695 697 5.243954 GCATTTATTATCCTCCAAACCCTCC 59.756 44.000 0.00 0.00 0.00 4.30
696 698 6.071320 AGCATTTATTATCCTCCAAACCCTC 58.929 40.000 0.00 0.00 0.00 4.30
697 699 6.030727 AGCATTTATTATCCTCCAAACCCT 57.969 37.500 0.00 0.00 0.00 4.34
698 700 5.833131 TGAGCATTTATTATCCTCCAAACCC 59.167 40.000 0.00 0.00 0.00 4.11
699 701 6.959639 TGAGCATTTATTATCCTCCAAACC 57.040 37.500 0.00 0.00 0.00 3.27
702 704 9.866655 AGTTAATGAGCATTTATTATCCTCCAA 57.133 29.630 0.52 0.00 32.50 3.53
703 705 9.866655 AAGTTAATGAGCATTTATTATCCTCCA 57.133 29.630 0.52 0.00 32.50 3.86
735 737 9.998106 GCTTGGATCCAAATACTAAATAGACTA 57.002 33.333 26.87 0.00 35.33 2.59
736 738 8.494433 TGCTTGGATCCAAATACTAAATAGACT 58.506 33.333 26.87 0.00 35.33 3.24
737 739 8.677148 TGCTTGGATCCAAATACTAAATAGAC 57.323 34.615 26.87 8.83 35.33 2.59
738 740 9.288576 CATGCTTGGATCCAAATACTAAATAGA 57.711 33.333 26.87 1.15 35.33 1.98
739 741 8.517878 CCATGCTTGGATCCAAATACTAAATAG 58.482 37.037 26.87 12.80 46.92 1.73
740 742 7.451255 CCCATGCTTGGATCCAAATACTAAATA 59.549 37.037 26.87 1.90 46.92 1.40
741 743 6.268387 CCCATGCTTGGATCCAAATACTAAAT 59.732 38.462 26.87 10.52 46.92 1.40
742 744 5.598005 CCCATGCTTGGATCCAAATACTAAA 59.402 40.000 26.87 8.81 46.92 1.85
743 745 5.139727 CCCATGCTTGGATCCAAATACTAA 58.860 41.667 26.87 10.11 46.92 2.24
744 746 4.167892 ACCCATGCTTGGATCCAAATACTA 59.832 41.667 26.87 12.31 46.92 1.82
745 747 3.052642 ACCCATGCTTGGATCCAAATACT 60.053 43.478 26.87 10.16 46.92 2.12
746 748 3.068590 CACCCATGCTTGGATCCAAATAC 59.931 47.826 26.87 19.00 46.92 1.89
747 749 3.053019 TCACCCATGCTTGGATCCAAATA 60.053 43.478 26.87 18.63 46.92 1.40
748 750 2.112998 CACCCATGCTTGGATCCAAAT 58.887 47.619 26.87 16.27 46.92 2.32
749 751 1.076841 TCACCCATGCTTGGATCCAAA 59.923 47.619 26.87 14.63 46.92 3.28
750 752 0.703488 TCACCCATGCTTGGATCCAA 59.297 50.000 25.53 25.53 46.92 3.53
751 753 0.256752 CTCACCCATGCTTGGATCCA 59.743 55.000 19.85 11.44 46.92 3.41
752 754 0.466922 CCTCACCCATGCTTGGATCC 60.467 60.000 19.85 4.20 46.92 3.36
753 755 1.105759 GCCTCACCCATGCTTGGATC 61.106 60.000 19.85 0.00 46.92 3.36
754 756 1.076485 GCCTCACCCATGCTTGGAT 60.076 57.895 19.85 0.00 46.92 3.41
755 757 0.913934 TAGCCTCACCCATGCTTGGA 60.914 55.000 19.85 0.00 46.92 3.53
756 758 0.465097 CTAGCCTCACCCATGCTTGG 60.465 60.000 11.68 11.68 43.23 3.61
757 759 1.099879 GCTAGCCTCACCCATGCTTG 61.100 60.000 2.29 0.00 36.57 4.01
758 760 1.225704 GCTAGCCTCACCCATGCTT 59.774 57.895 2.29 0.00 36.57 3.91
759 761 2.914289 GCTAGCCTCACCCATGCT 59.086 61.111 2.29 0.00 39.10 3.79
760 762 2.590007 CGCTAGCCTCACCCATGC 60.590 66.667 9.66 0.00 0.00 4.06
761 763 1.068753 CTCGCTAGCCTCACCCATG 59.931 63.158 9.66 0.00 0.00 3.66
762 764 0.978146 AACTCGCTAGCCTCACCCAT 60.978 55.000 9.66 0.00 0.00 4.00
763 765 1.192146 AAACTCGCTAGCCTCACCCA 61.192 55.000 9.66 0.00 0.00 4.51
764 766 0.036294 AAAACTCGCTAGCCTCACCC 60.036 55.000 9.66 0.00 0.00 4.61
765 767 2.094130 ACTAAAACTCGCTAGCCTCACC 60.094 50.000 9.66 0.00 0.00 4.02
766 768 3.180613 GACTAAAACTCGCTAGCCTCAC 58.819 50.000 9.66 0.00 0.00 3.51
767 769 2.165845 GGACTAAAACTCGCTAGCCTCA 59.834 50.000 9.66 0.00 0.00 3.86
768 770 2.481622 GGGACTAAAACTCGCTAGCCTC 60.482 54.545 9.66 0.00 0.00 4.70
769 771 1.481363 GGGACTAAAACTCGCTAGCCT 59.519 52.381 9.66 0.00 0.00 4.58
770 772 1.206371 TGGGACTAAAACTCGCTAGCC 59.794 52.381 9.66 0.00 0.00 3.93
771 773 2.667473 TGGGACTAAAACTCGCTAGC 57.333 50.000 4.06 4.06 0.00 3.42
772 774 5.903810 AGTATTGGGACTAAAACTCGCTAG 58.096 41.667 0.00 0.00 0.00 3.42
773 775 5.927281 AGTATTGGGACTAAAACTCGCTA 57.073 39.130 0.00 0.00 0.00 4.26
774 776 4.820894 AGTATTGGGACTAAAACTCGCT 57.179 40.909 0.00 0.00 0.00 4.93
775 777 5.874895 AAAGTATTGGGACTAAAACTCGC 57.125 39.130 0.00 0.00 0.00 5.03
776 778 8.543862 ACTAAAAGTATTGGGACTAAAACTCG 57.456 34.615 0.00 0.00 0.00 4.18
777 779 9.498176 TGACTAAAAGTATTGGGACTAAAACTC 57.502 33.333 0.00 0.00 0.00 3.01
781 783 9.667107 CTCATGACTAAAAGTATTGGGACTAAA 57.333 33.333 0.00 0.00 0.00 1.85
782 784 9.042450 TCTCATGACTAAAAGTATTGGGACTAA 57.958 33.333 0.00 0.00 0.00 2.24
783 785 8.475639 GTCTCATGACTAAAAGTATTGGGACTA 58.524 37.037 11.62 0.00 37.54 2.59
784 786 7.331791 GTCTCATGACTAAAAGTATTGGGACT 58.668 38.462 11.62 0.00 37.54 3.85
785 787 6.255887 CGTCTCATGACTAAAAGTATTGGGAC 59.744 42.308 9.88 9.88 40.86 4.46
786 788 6.153851 TCGTCTCATGACTAAAAGTATTGGGA 59.846 38.462 0.00 0.00 40.86 4.37
787 789 6.338146 TCGTCTCATGACTAAAAGTATTGGG 58.662 40.000 0.00 0.00 40.86 4.12
788 790 7.827819 TTCGTCTCATGACTAAAAGTATTGG 57.172 36.000 0.00 0.00 40.86 3.16
789 791 7.900352 GCTTTCGTCTCATGACTAAAAGTATTG 59.100 37.037 15.45 0.00 41.03 1.90
790 792 7.819900 AGCTTTCGTCTCATGACTAAAAGTATT 59.180 33.333 15.45 6.19 41.03 1.89
791 793 7.324178 AGCTTTCGTCTCATGACTAAAAGTAT 58.676 34.615 15.45 7.84 41.03 2.12
792 794 6.688578 AGCTTTCGTCTCATGACTAAAAGTA 58.311 36.000 15.45 0.00 41.03 2.24
793 795 5.542779 AGCTTTCGTCTCATGACTAAAAGT 58.457 37.500 15.45 0.00 41.03 2.66
794 796 7.043059 GGATAGCTTTCGTCTCATGACTAAAAG 60.043 40.741 0.00 1.42 41.41 2.27
795 797 6.757010 GGATAGCTTTCGTCTCATGACTAAAA 59.243 38.462 0.00 0.00 37.40 1.52
796 798 6.127451 TGGATAGCTTTCGTCTCATGACTAAA 60.127 38.462 0.00 0.00 40.86 1.85
797 799 5.359860 TGGATAGCTTTCGTCTCATGACTAA 59.640 40.000 0.00 0.00 40.86 2.24
798 800 4.887655 TGGATAGCTTTCGTCTCATGACTA 59.112 41.667 0.00 0.00 40.86 2.59
799 801 3.701542 TGGATAGCTTTCGTCTCATGACT 59.298 43.478 0.00 0.00 40.86 3.41
800 802 4.046938 TGGATAGCTTTCGTCTCATGAC 57.953 45.455 0.00 0.00 39.70 3.06
801 803 4.686972 CTTGGATAGCTTTCGTCTCATGA 58.313 43.478 0.00 0.00 0.00 3.07
802 804 3.247173 GCTTGGATAGCTTTCGTCTCATG 59.753 47.826 0.00 0.00 46.77 3.07
803 805 3.462021 GCTTGGATAGCTTTCGTCTCAT 58.538 45.455 0.00 0.00 46.77 2.90
804 806 2.893637 GCTTGGATAGCTTTCGTCTCA 58.106 47.619 0.00 0.00 46.77 3.27
815 817 6.205658 GCTTAAATTAGAGGGTGCTTGGATAG 59.794 42.308 0.00 0.00 0.00 2.08
816 818 6.062095 GCTTAAATTAGAGGGTGCTTGGATA 58.938 40.000 0.00 0.00 0.00 2.59
817 819 4.889995 GCTTAAATTAGAGGGTGCTTGGAT 59.110 41.667 0.00 0.00 0.00 3.41
818 820 4.263727 TGCTTAAATTAGAGGGTGCTTGGA 60.264 41.667 0.00 0.00 0.00 3.53
819 821 4.016444 TGCTTAAATTAGAGGGTGCTTGG 58.984 43.478 0.00 0.00 0.00 3.61
820 822 4.458989 TGTGCTTAAATTAGAGGGTGCTTG 59.541 41.667 0.00 0.00 0.00 4.01
821 823 4.662278 TGTGCTTAAATTAGAGGGTGCTT 58.338 39.130 0.00 0.00 0.00 3.91
822 824 4.301072 TGTGCTTAAATTAGAGGGTGCT 57.699 40.909 0.00 0.00 0.00 4.40
823 825 5.385509 TTTGTGCTTAAATTAGAGGGTGC 57.614 39.130 0.00 0.00 0.00 5.01
874 876 4.640789 TTGTGCGAAAATTACAACAGGT 57.359 36.364 0.00 0.00 30.06 4.00
931 941 5.994054 TCATTGCATTTATAGAGAGGCAGAC 59.006 40.000 0.00 0.00 32.31 3.51
1280 1460 1.228245 TGGGAAGCAGTTCTGGTGC 60.228 57.895 5.28 3.45 41.54 5.01
1423 1603 4.658063 ACACCCTGTTTATCAATTTCGGA 58.342 39.130 0.00 0.00 0.00 4.55
1450 1630 4.548451 TCTATCATCTGCCCATCATCAC 57.452 45.455 0.00 0.00 0.00 3.06
1677 1923 0.319383 CTCTGCTTGCGGCTCGATAT 60.319 55.000 0.00 0.00 42.39 1.63
1679 1925 2.025767 ATCTCTGCTTGCGGCTCGAT 62.026 55.000 0.00 0.00 42.39 3.59
1741 2019 2.321060 CGCTTGCGGCTTGATACG 59.679 61.111 7.16 0.00 39.13 3.06
1750 2028 1.305219 TTTGGAATCTCCGCTTGCGG 61.305 55.000 26.01 26.01 40.17 5.69
1802 2171 0.802494 GGTGATTGGTTGTAGCGGTG 59.198 55.000 0.00 0.00 0.00 4.94
1803 2172 0.398696 TGGTGATTGGTTGTAGCGGT 59.601 50.000 0.00 0.00 0.00 5.68
1804 2173 1.401552 CATGGTGATTGGTTGTAGCGG 59.598 52.381 0.00 0.00 0.00 5.52
1806 2175 2.423538 GTCCATGGTGATTGGTTGTAGC 59.576 50.000 12.58 0.00 35.64 3.58
1808 2177 2.705730 CGTCCATGGTGATTGGTTGTA 58.294 47.619 12.58 0.00 35.64 2.41
1809 2178 1.533625 CGTCCATGGTGATTGGTTGT 58.466 50.000 12.58 0.00 35.64 3.32
1810 2179 0.171007 GCGTCCATGGTGATTGGTTG 59.829 55.000 12.58 0.00 35.64 3.77
1811 2180 0.251121 TGCGTCCATGGTGATTGGTT 60.251 50.000 12.58 0.00 35.64 3.67
1813 2182 0.677731 ACTGCGTCCATGGTGATTGG 60.678 55.000 12.58 2.00 35.45 3.16
1854 2340 3.430042 TGAGCAATCTCAGAAAGCCTT 57.570 42.857 0.00 0.00 43.95 4.35
1911 2619 3.555324 TCCGTGGAAGTGCAGCCA 61.555 61.111 0.00 0.00 0.00 4.75
1945 2653 3.888930 AGGACGAGCTTCCAAAATTTGAA 59.111 39.130 7.37 0.00 38.25 2.69
1946 2654 3.253188 CAGGACGAGCTTCCAAAATTTGA 59.747 43.478 7.37 0.00 38.25 2.69
1962 2670 3.058224 GTGGAGGAAAAATGTTCAGGACG 60.058 47.826 0.00 0.00 0.00 4.79
2023 2747 1.920835 GAGCTGAAGGGGAGGGTGT 60.921 63.158 0.00 0.00 0.00 4.16
2032 2756 1.239968 GCCACACAAGGAGCTGAAGG 61.240 60.000 0.00 0.00 0.00 3.46
2044 2768 2.589157 CCTTACGGAGGGCCACACA 61.589 63.158 6.18 0.00 42.26 3.72
2093 2996 2.695359 GTAGTGCAATCGTTTCTCCCA 58.305 47.619 0.00 0.00 0.00 4.37
2107 3010 1.071567 GTTGAGAGACGCCGTAGTGC 61.072 60.000 0.00 0.00 0.00 4.40
2109 3012 0.956633 TTGTTGAGAGACGCCGTAGT 59.043 50.000 0.00 0.00 0.00 2.73
2111 3014 0.956633 AGTTGTTGAGAGACGCCGTA 59.043 50.000 0.00 0.00 0.00 4.02
2112 3015 0.956633 TAGTTGTTGAGAGACGCCGT 59.043 50.000 0.00 0.00 0.00 5.68
2117 3020 6.154445 TGTACCGAAATAGTTGTTGAGAGAC 58.846 40.000 0.00 0.00 0.00 3.36
2121 3024 7.010183 CCACTATGTACCGAAATAGTTGTTGAG 59.990 40.741 1.80 0.00 37.48 3.02
2125 3028 5.105064 AGCCACTATGTACCGAAATAGTTGT 60.105 40.000 1.80 0.00 37.48 3.32
2128 3031 6.912951 ATAGCCACTATGTACCGAAATAGT 57.087 37.500 0.00 0.00 39.62 2.12
2210 3113 2.100252 CTCCGGATACCTCGCTAAACAA 59.900 50.000 3.57 0.00 0.00 2.83
2246 3754 4.428209 CCTGATAGTGATAAGCTATGGCG 58.572 47.826 0.00 0.00 44.37 5.69
2260 3768 4.609098 CGGAGCCTCCCTGATAGT 57.391 61.111 4.85 0.00 31.13 2.12
2404 3912 8.040132 TCATTAATTTTTGCCTCAGTTATTGGG 58.960 33.333 0.00 0.00 0.00 4.12
2405 3913 9.603921 ATCATTAATTTTTGCCTCAGTTATTGG 57.396 29.630 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.